View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2719_high_10 (Length: 306)
Name: NF2719_high_10
Description: NF2719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2719_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 27300422 - 27300150
Alignment:
| Q |
19 |
ttttcatgtttcctcaatactctatgggtgcacatcagaacatcacgtgctaccctaccaaccataatcagtcacgtgccatggcagatatagaagtgac |
118 |
Q |
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| T |
27300422 |
ttttcatgtttcctcaatactctatggatgcacgtcagaacatcacgtgctaccctaccaaacataatcagtcacgtgccatgggagatatagaagtgac |
27300323 |
T |
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| Q |
119 |
tttggttgatagtcaagcgaatataaagataatgttgaaaaaacgacaaggacaggttatgaagatggttgttgggattcaaaatcttggctttaatatt |
218 |
Q |
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| T |
27300322 |
tttggttgatagtcatgcgaatataaagataatgttgaaaaaacgacaaggacaggttatgaagatggttgctgggattcaaaatcttggcttcaacatt |
27300223 |
T |
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| Q |
219 |
ctacaccttaatgtttccagtgtggatgataatgtccttgtctcggttagtgctaaggtaaattggtttacat |
291 |
Q |
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||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
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| T |
27300222 |
ctacaccttaatgtttccagtatggatgataatgttcttgtctcggttagtgccaaggtaaattggtttacat |
27300150 |
T |
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