View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2719_high_15 (Length: 218)
Name: NF2719_high_15
Description: NF2719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2719_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 27300483 - 27300680
Alignment:
| Q |
1 |
tgtttattttcttttgtcccttcatgaattgtagatgatgttctagctccttcaagaagttaattgcaccgccaactattgacgcttgatcaccctgttt |
100 |
Q |
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| T |
27300483 |
tgtttattttcttttgtcccttcatgaattgtagatgctgttgtagctccttcaagaagttaattgcaccgccaactattgacgcttgatcaccctgttt |
27300582 |
T |
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| Q |
101 |
ttgaaccacatgtagaatttagggttgaaaattttgannnnnnncttctaactattacaaagtataaaatcgatatcatgtgttgttggggagtctgggg |
200 |
Q |
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||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27300583 |
ttgaaccacatgtagaatttaggattgaaaattttgtttttttc--tctaactattacaaagtataaaatcgatatcatgtgttgttggggagtctgggg |
27300680 |
T |
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