View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2719_high_3 (Length: 481)
Name: NF2719_high_3
Description: NF2719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2719_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 446
Target Start/End: Complemental strand, 45156320 - 45155875
Alignment:
| Q |
1 |
gcacagaagagttgaaaactaaagttaagacgggttgttgttgcgtgtttagaacatgaaagtgacacagatcagattctaaaagtcacaaaaataagca |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45156320 |
gcacaggagagttgaaaactaaagttaagacgggttgttgttgggtgtttagaacatgaaagtgacacagatcagattctaaaagtcacaaaaatcagca |
45156221 |
T |
|
| Q |
101 |
aaaacaagatagaaaagaatttgatgaaaacgatataccttggtaacaaagatgagattacattcggtcttacagatgcagcaacgtcgatcatcacaaa |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45156220 |
aaatcaagatagaaaagaatttgatgaaaacgatataccttggtaacaaagatgagattacattcggtcttacagatgcagcaacgtcgatcatcacaaa |
45156121 |
T |
|
| Q |
201 |
tgaaacggagacgagcaacgcaggtggagcaaacctcacgatgcaaacaaggtccgtacgcaacccattccaatggttcggcgcagacagcacaacaatc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
45156120 |
tgaaacggagacgagcaacgcaggtggagcaaacctcacgatgcaaacaaggtccgtacgcaacccattccaatggttcggcgcagacagcacagcaatc |
45156021 |
T |
|
| Q |
301 |
atccatgtcttcttctcttcaaaccctaatttcaatgcccagatcaattcacgaacgattgttattgcaattaggggaagattgaatttctagggtttca |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45156020 |
atccatgtcttcttctcttcaaaccctaatttcaatgcccagatcaattcacgaacgattgttattgcaattaggggaagattgaatttctagggtttca |
45155921 |
T |
|
| Q |
401 |
ggttgattgattgaaaaatcgtagacgtggagcggaagggtcggaa |
446 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45155920 |
ggttgattgattgaaaaatcgtagacgtggagcggaagggtcggaa |
45155875 |
T |
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