View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2719_low_9 (Length: 326)

Name: NF2719_low_9
Description: NF2719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2719_low_9
NF2719_low_9
[»] chr8 (16 HSPs)
chr8 (114-310)||(23857984-23858180)
chr8 (7-88)||(6886005-6886086)
chr8 (7-88)||(19265107-19265187)
chr8 (10-88)||(24583827-24583904)
chr8 (7-88)||(13313970-13314050)
chr8 (7-88)||(14271184-14271265)
chr8 (7-88)||(24722644-24722724)
chr8 (8-68)||(18829504-18829564)
chr8 (116-187)||(23857524-23857596)
chr8 (7-82)||(23868516-23868590)
chr8 (4-61)||(17977588-17977645)
chr8 (7-88)||(21315670-21315750)
chr8 (7-68)||(24519684-24519745)
chr8 (7-88)||(25233347-25233427)
chr8 (7-88)||(29381334-29381414)
chr8 (22-82)||(24389065-24389124)
[»] chr5 (15 HSPs)
chr5 (7-82)||(26121689-26121764)
chr5 (118-218)||(14216680-14216780)
chr5 (1-88)||(24658999-24659085)
chr5 (7-69)||(18227010-18227072)
chr5 (7-81)||(24341083-24341156)
chr5 (7-88)||(18831518-18831599)
chr5 (4-68)||(19762295-19762359)
chr5 (7-68)||(13692947-13693008)
chr5 (7-88)||(16522545-16522625)
chr5 (7-76)||(17831037-17831106)
chr5 (7-88)||(20859695-20859775)
chr5 (7-76)||(24264458-24264526)
chr5 (17-81)||(28254199-28254264)
chr5 (7-88)||(28665808-28665888)
chr5 (37-81)||(18938908-18938952)
[»] chr3 (27 HSPs)
chr3 (118-202)||(6476177-6476261)
chr3 (124-202)||(6745701-6745779)
chr3 (7-80)||(23699129-23699202)
chr3 (7-80)||(23717584-23717657)
chr3 (7-80)||(23736040-23736113)
chr3 (5-88)||(2166653-2166735)
chr3 (7-82)||(3115395-3115470)
chr3 (159-202)||(6516307-6516350)
chr3 (1-88)||(19575209-19575295)
chr3 (7-68)||(23055279-23055340)
chr3 (7-83)||(2722860-2722935)
chr3 (7-82)||(16229005-16229079)
chr3 (129-190)||(6475619-6475680)
chr3 (129-190)||(6515728-6515789)
chr3 (129-190)||(6746276-6746337)
chr3 (7-88)||(8115932-8116012)
chr3 (27-80)||(8144536-8144589)
chr3 (7-88)||(16244696-16244776)
chr3 (7-88)||(20022559-20022639)
chr3 (7-68)||(20886168-20886229)
chr3 (7-80)||(23755087-23755160)
chr3 (7-68)||(26092241-26092302)
chr3 (7-68)||(28369490-28369551)
chr3 (7-68)||(28377308-28377369)
chr3 (7-68)||(28385130-28385191)
chr3 (7-88)||(31284974-31285055)
chr3 (28-88)||(12372957-12373016)
[»] chr6 (8 HSPs)
chr6 (7-88)||(9898590-9898671)
chr6 (7-68)||(10504525-10504586)
chr6 (7-88)||(21687850-21687930)
chr6 (7-68)||(32759384-32759445)
chr6 (4-88)||(14075773-14075856)
chr6 (37-88)||(9519095-9519146)
chr6 (7-82)||(22409265-22409339)
chr6 (7-69)||(2587653-2587715)
[»] chr2 (13 HSPs)
chr2 (7-88)||(20175183-20175264)
chr2 (7-88)||(24089894-24089974)
chr2 (7-88)||(25886870-25886950)
chr2 (7-88)||(27908144-27908224)
chr2 (10-82)||(13777474-13777546)
chr2 (4-68)||(26652360-26652424)
chr2 (7-82)||(23010765-23010839)
chr2 (10-81)||(32086378-32086448)
chr2 (7-68)||(8502173-8502234)
chr2 (7-88)||(17629387-17629467)
chr2 (7-88)||(17674679-17674759)
chr2 (7-88)||(25921874-25921954)
chr2 (7-63)||(17350401-17350457)
[»] chr1 (20 HSPs)
chr1 (10-70)||(22621226-22621286)
chr1 (7-74)||(16360847-16360914)
chr1 (7-78)||(27116833-27116904)
chr1 (7-68)||(10063690-10063751)
chr1 (7-88)||(15527521-15527602)
chr1 (7-88)||(21333738-21333818)
chr1 (7-88)||(23035664-23035745)
chr1 (1-82)||(33191713-33191793)
chr1 (7-87)||(18528218-18528297)
chr1 (7-81)||(15812132-15812207)
chr1 (7-82)||(21983713-21983787)
chr1 (10-88)||(31234946-31235023)
chr1 (7-88)||(15542992-15543072)
chr1 (7-68)||(17443222-17443283)
chr1 (7-88)||(18735226-18735306)
chr1 (7-88)||(24055020-24055100)
chr1 (7-88)||(26612027-26612107)
chr1 (7-88)||(28009153-28009233)
chr1 (22-82)||(13267199-13267258)
chr1 (8-88)||(21450117-21450196)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-88)||(16590-16676)
[»] chr7 (22 HSPs)
chr7 (7-82)||(12330400-12330474)
chr7 (7-88)||(9134136-9134216)
chr7 (7-68)||(9501316-9501377)
chr7 (7-68)||(18448941-18449002)
chr7 (4-82)||(18362691-18362768)
chr7 (7-81)||(25692119-25692192)
chr7 (7-88)||(8053088-8053168)
chr7 (7-88)||(8977979-8978059)
chr7 (7-88)||(9917509-9917590)
chr7 (7-88)||(9925421-9925502)
chr7 (7-88)||(23297695-23297775)
chr7 (7-88)||(39272141-39272221)
chr7 (7-82)||(6007015-6007090)
chr7 (1-88)||(8310472-8310558)
chr7 (7-82)||(19154261-19154336)
chr7 (7-82)||(20753660-20753735)
chr7 (10-68)||(21884296-21884354)
chr7 (7-88)||(2565483-2565563)
chr7 (37-82)||(2570277-2570322)
chr7 (37-82)||(2573691-2573736)
chr7 (7-68)||(10938611-10938672)
chr7 (7-68)||(13708485-13708546)
[»] chr4 (14 HSPs)
chr4 (7-68)||(9264038-9264099)
chr4 (7-88)||(7583343-7583423)
chr4 (7-88)||(10105628-10105708)
chr4 (7-88)||(12577972-12578052)
chr4 (7-88)||(14572791-14572872)
chr4 (7-68)||(15049222-15049283)
chr4 (7-68)||(15105141-15105202)
chr4 (7-68)||(19547752-19547813)
chr4 (8-68)||(1832613-1832673)
chr4 (8-68)||(18448112-18448172)
chr4 (8-68)||(23975169-23975229)
chr4 (7-88)||(5529311-5529392)
chr4 (7-68)||(11520173-11520234)
chr4 (7-88)||(11781886-11781966)
[»] scaffold0386 (1 HSPs)
scaffold0386 (4-88)||(14197-14280)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-88)||(22308-22394)
scaffold0056 (7-88)||(53824-53904)
[»] scaffold1156 (1 HSPs)
scaffold1156 (7-88)||(592-672)
[»] scaffold0054 (1 HSPs)
scaffold0054 (7-88)||(73004-73084)
[»] scaffold0019 (1 HSPs)
scaffold0019 (7-64)||(27473-27530)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-88)||(244504-244585)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-87)||(40620-40702)
[»] scaffold1339 (1 HSPs)
scaffold1339 (37-82)||(599-644)
[»] scaffold0085 (1 HSPs)
scaffold0085 (7-68)||(23362-23423)
[»] scaffold0034 (1 HSPs)
scaffold0034 (7-88)||(81064-81144)


Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 114 - 310
Target Start/End: Complemental strand, 23858180 - 23857984
Alignment:
Q  114 taaataacgggtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattttggcgcaattt 213  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23858180 taaataacgcgtaatatttaattatttccttaaaacctcccacgcaattgatatataaaatcacaagttaataaattgagctaaaattttggcgcaattt 23858081  T
Q  214 actcttctccctcctaaacataatgtttttaacaacactaaccgcaccatgcatcttcatttttgtttttgaaagaacaccatgcttcttcatatat 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23858080 actcttctccctcctaaacataatgtttttaacaacactaaccgcaccatgcatcttcatttttgtttttgaaagaacaccatgcctcttcatatat 23857984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 6886005 - 6886086
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| |||||||||||  ||||| |||| |||||||| |||||| ||  || |||||||||||||||||| |||||    
T  6886005 atcttagaactctagcctataactaattagttactcatggtaactaaagacaagatataaaaagataaaaacataccctaga 6886086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 19265107 - 19265187
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  19265107 atcttagaacgctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-aaaagataaaaacataccctaga 19265187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 24583904 - 24583827
Alignment:
Q  10 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  24583904 ttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 24583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 13314050 - 13313970
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||| ||||| |||||    
T  13314050 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaatcataccctaga 13313970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 14271184 - 14271265
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||  || |||||||  | ||| ||||||||||||| |||||| ||  ||||||||||||||||||||| |||||    
T  14271184 atcttagaactttaacctataactacttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 14271265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 24722724 - 24722644
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  24722724 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 24722644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 18829504 - 18829564
Alignment:
Q  8 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||| |||| ||||||||| |||| || |||||  |||||||||||||||||    
T  18829504 tcttagaaccctaccctaaaaagaattagttacgcaaggtaacaaaagataaattacaaaa 18829564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 23857524 - 23857596
Alignment:
Q  116 aataacgggtaatatttaattatttccttaaaa-cctcccatgcaattgatatataaaatcacaagttaataa 187  Q
    |||||||  ||| ||||||||||||  |||||| ||| ||||| |||||||||| ||||||||||||||||||    
T  23857524 aataacgcataagatttaattatttttttaaaaaccttccatgtaattgatatacaaaatcacaagttaataa 23857596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 23868590 - 23868516
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  23868590 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 23868516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 17977588 - 17977645
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaat 61  Q
    ||||||||||||| ||||| || ||||| ||| ||||||||||||| |||||| ||||    
T  17977588 tttatcttagaactctagcttaaaaagatttagttacacatggtaactaaagacaaat 17977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 21315670 - 21315750
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||  || |||| ||||||||| |||||||| |||| |||| | ||||||| ||| ||||||||||||| |||||    
T  21315670 atcttagaactttaacctaaaaagaattagttacacatagtaactaaaaaaaaattactaaa-gataaaaacataccctaga 21315750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 24519745 - 24519684
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||| |||||||||||| ||||| ||| || |||||||||| |||||| ||| |||||||    
T  24519745 atcttaaaaccctagcctaaaaagatttagttgcacatggtaactaaagacaaactacaaaa 24519684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 25233347 - 25233427
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| ||||   |||||||  |||||||||||||||| |||||    
T  25233347 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaagcaaattac-taaagataaaaacataccctaga 25233427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 29381414 - 29381334
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||| ||||||| |||||    
T  29381414 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataataacataccctaga 29381334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 24389065 - 24389124
Alignment:
Q  22 cctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  24389065 cctaaaaagaattagttacacatggtaactaaaaaaaaattac-taaagataaaaacatac 24389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 26121689 - 26121764
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||||||| |||| ||||| ||| |||||||| |||| |||||| |||||||||||||||||||||||||    
T  26121689 atcttagaaccctatcctaaaaagatttagttacacattgtaactaaagacaaattacaaaaagataaaaacatac 26121764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 14216780 - 14216680
Alignment:
Q  118 taacgggtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattttggcgcaatttactc 217  Q
    ||||| |||| ||||||||||||  |||||| ||||| || |||||||||| |||||||||| |||| ||| ||||||  ||||| | | ||||||||||    
T  14216780 taacgcgtaagatttaattattttattaaaatctcccgtgtaattgatatacaaaatcacaaattaacaaaatgagctgcaatttggccacaatttactc 14216681  T
Q  218 t 218  Q
    |    
T  14216680 t 14216680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24659085 - 24658999
Alignment:
Q  1 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||| |||||||||| ||| |||| ||||| ||| | ||||||||||| |||| |||||||||||||| | |||||||||| |||||    
T  24659085 agattcatcttagaactctaacctaaaaagatttagtaacacatggtaactaaaaataaattacaaaaa-agaaaaacataccctaga 24658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 18227010 - 18227072
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaa 69  Q
    |||||||||||||||||||  |||| |||  ||| |||||||| |||||||||||||||||||    
T  18227010 atcttagaaccctagcctaacaagatttagctactcatggtaactaaagataaattacaaaaa 18227072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 24341156 - 24341083
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 81  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||| |||| ||| ||| ||||||||||||||||    
T  24341156 atcttagaaccctagcatataaatatttagttacacatgataatt-aagacaaaatacgaaaagataaaaacata 24341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 18831518 - 18831599
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||||||  | ||| |||||||| |||| |||||| ||  ||||||||||||||||||||| |||||    
T  18831518 atcttagaactctaacctataactatttagttacacatcgtaactaaagacaagatacaaaaagataaaaacataccctaga 18831599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 19762359 - 19762295
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||||||||||| ||| | ||| |||| |||||||| |||| | |||||||||||    
T  19762359 tttatcttagaaccctagcctaaaaatatttagttacccatggtaactaaaaacaaattacaaaa 19762295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 13692947 - 13693008
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||||| || ||||  ||| |||| |||||||| |||||| |||||||||||    
T  13692947 atcttagaaccctagcgtaaaaagttttagttactcatggtaactaaagacaaattacaaaa 13693008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 16522625 - 16522545
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| |||||| |||||| |||| | ||||||| ||| ||||||||||||| |||||    
T  16522625 atcttagaacgctaacctaaaaagatttagttacacgtggtaactaaaaacaaattactaaa-gataaaaacataccctaga 16522545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 17831037 - 17831106
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaa 76  Q
    |||||||||||||| |||| ||||| ||| |||| |||| ||| ||| ||||||||||||| | ||||||    
T  17831037 atcttagaaccctaacctaaaaagatttagttactcatgataactaaggataaattacaaacaaataaaa 17831106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20859695 - 20859775
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||| | ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  20859695 atcttagaactctaacctaaaaaaatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 20859775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 24264526 - 24264458
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaa 76  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||| |||| ||| ||| |||||||||||    
T  24264526 atcttagaaccctagcatataaatatttagttacacatgataatt-aagacaaaatacgaaaagataaaa 24264458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 28254199 - 28254264
Alignment:
Q  17 cctagcctataaagaattaattacacatggtaattaaagataaattacaaaa-agataaaaacata 81  Q
    ||||| ||| ||||| ||| |||| |||||||| |||||||||||||||||| | |||||||||||    
T  28254199 cctaggctaaaaagatttagttactcatggtaactaaagataaattacaaaagaaataaaaacata 28254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 28665808 - 28665888
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| ||||   |||||||  |||||||||||||||| |||||    
T  28665808 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaatcaaattac-taaagataaaaacataccctaga 28665888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 18938908 - 18938952
Alignment:
Q  37 ttacacatggtaattaaagataaattacaaaaagataaaaacata 81  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||    
T  18938908 ttacacatggtaactaaagacaagatacaaaaagataaaaacata 18938952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 6476261 - 6476177
Alignment:
Q  118 taacgggtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattt 202  Q
    ||||| |||| |||||||||||| |||||||||| || || |||||||||| ||||||| | ||||||||||||||||| |||||    
T  6476261 taacgagtaagatttaattattttcttaaaaccttccgtgtaattgatatacaaaatcagaggttaataaattgagctacaattt 6476177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 6745701 - 6745779
Alignment:
Q  124 gtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattt 202  Q
    |||| |||||||||||| ||||||| || || || |||||||||| ||||| ||||||||||||||||||||| |||||    
T  6745701 gtaagatttaattattttcttaaaatcttccgtgtaattgatatacaaaattacaagttaataaattgagctacaattt 6745779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 23699202 - 23699129
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 80  Q
    ||||||||||| || |||| ||| | ||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  23699202 atcttagaaccataacctaaaaatatttaattacacatggtaactaaaaacaaattactaaaagataaaaacat 23699129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 23717657 - 23717584
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 80  Q
    ||||||||||| || |||| ||| | ||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  23717657 atcttagaaccataacctaaaaatatttaattacacatggtaactaaaaacaaattactaaaagataaaaacat 23717584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 23736113 - 23736040
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 80  Q
    ||||||||||| || |||| ||| | ||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  23736113 atcttagaaccataacctaaaaatatttaattacacatggtaactaaaaacaaattactaaaagataaaaacat 23736040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 2166735 - 2166653
Alignment:
Q  5 ttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||||  ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  2166735 ttatcttagaattctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 2166653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 3115470 - 3115395
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||||||  | ||| ||||||||| |||||||||| ||  |||||||||||||||||||||    
T  3115470 atcttagaactctaacctataactacttagttacacatgataattaaagacaagatacaaaaagataaaaacatac 3115395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 6516350 - 6516307
Alignment:
Q  159 aattgatatataaaatcacaagttaataaattgagctaaaattt 202  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  6516350 aattgatatacaaaatcacaagttaataaattgagctacaattt 6516307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19575295 - 19575209
Alignment:
Q  1 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||| |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  19575295 agattcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatacactaga 19575209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 23055340 - 23055279
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||| |||||||||||| ||||| ||| |||| |||||||| |||||| |||||||||||    
T  23055340 atcttacaaccctagcctaaaaagacttagttactcatggtaactaaagacaaattacaaaa 23055279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 2722935 - 2722860
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 83  Q
    ||||||||||||||||||||||| |  || ||||| ||| ||| ||| || ||| ||||||||||||||||||||||    
T  2722935 atcttagaaccctagcctataaatatctagttacatatgataactaa-gacaaaatacaaaaagataaaaacatacg 2722860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 16229079 - 16229005
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||| ||||| ||||||||||||||||| ||||   |||||||  ||||||||||||||||    
T  16229079 atcttagaactctaacctaaaaagatttaattacacatggtaactaaaagcaaattac-taaagataaaaacatac 16229005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 6475619 - 6475680
Alignment:
Q  129 atttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaatt 190  Q
    |||||||||||| ||||||| ||| |||| |||||||| | | |||||||| ||||||||||    
T  6475619 atttaattatttgcttaaaatctcgcatgtaattgatacacacaatcacaacttaataaatt 6475680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 6515728 - 6515789
Alignment:
Q  129 atttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaatt 190  Q
    |||||||||||| ||||||| ||| |||| |||||||| | | |||||||| ||||||||||    
T  6515728 atttaattatttgcttaaaatctcgcatgtaattgatacacacaatcacaacttaataaatt 6515789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 6746337 - 6746276
Alignment:
Q  129 atttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaatt 190  Q
    |||||||||||| ||||||| ||| |||| |||||||| | | |||||||| ||||||||||    
T  6746337 atttaattatttgcttaaaatctcgcatgtaattgatacacacaatcacaacttaataaatt 6746276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 8116012 - 8115932
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| |||||||||||||  ||| | |||||||  |||||||||||||||| |||||    
T  8116012 atcttagaactctaacctaaaaagatttagttacacatggtaacaaaaaaaaaattac-taaagataaaaacataccctaga 8115932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 8144536 - 8144589
Alignment:
Q  27 aaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 80  Q
    ||||| ||| |||||||| |||| |||||| ||||||| |||||||||||||||    
T  8144536 aaagatttagttacacattgtaactaaagacaaattactaaaagataaaaacat 8144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 16244776 - 16244696
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||||||||| ||| |||| | ||||| | ||| ||||||||||||| |||||    
T  16244776 atcttagaactctaacctaaaaagaattagttacacatgataactaaaaacaaattcctaaa-gataaaaacataccctaga 16244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 20022639 - 20022559
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| || || ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  20022639 atcttagaactctaacctaaaatgatttagttacacatggtaactaaacacaaattac-taaagataaaaacataccctaga 20022559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 20886168 - 20886229
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||| ||||||| ||| | ||| |||| |||||||| |||||| |||||||||||    
T  20886168 atcttagaaccttagcctaaaaatatttagttactcatggtaactaaagacaaattacaaaa 20886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 23755160 - 23755087
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 80  Q
    ||||||||||| || |||| ||| | ||| ||||||||||||| |||| | ||||||  |||||||||||||||    
T  23755160 atcttagaaccataacctaaaaatatttagttacacatggtaactaaaaacaaattaataaaagataaaaacat 23755087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 26092241 - 26092302
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||| ||||  |||  ||| |||| ||||||||||||| |||||||||||||    
T  26092241 atcttagaaccctaccctaataaggtttatttactcatggtaattaaatataaattacaaaa 26092302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 28369551 - 28369490
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||| |||||| ||||| ||| |||| |||||||| |||||| |||||| ||||    
T  28369551 atcttagaacccaagcctaaaaagatttagttacccatggtaactaaagagaaattataaaa 28369490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 28377369 - 28377308
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||| |||||| ||||| ||| |||| |||||||| |||||| |||||| ||||    
T  28377369 atcttagaacccaagcctaaaaagatttagttacccatggtaactaaagagaaattataaaa 28377308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 28385191 - 28385130
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||| |||||| ||||| ||| |||| |||||||| |||||| |||||| ||||    
T  28385191 atcttagaacccaagcctaaaaagatttagttacccatggtaactaaagagaaattataaaa 28385130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 31285055 - 31284974
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||| || | ||  |||| ||| ||||||| ||||| |||||| ||||||| |||||||||||| |||| |||||    
T  31285055 atcttagaaccataacataataagatttagttacacaaggtaactaaagacaaattactaaaagataaaaatataccctaga 31284974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 12373016 - 12372957
Alignment:
Q  28 aagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||| ||| ||||||||||||| |||||| |||||||  |||||||||||||||| |||||    
T  12373016 aagatttagttacacatggtaaataaagacaaattac-taaagataaaaacataccctaga 12372957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 9898671 - 9898590
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||||||||| |||||| |  || |||||| |||||| |||||||||| ||||||||||||||| ||||| |||||    
T  9898671 atcttagaaccctagcttataaacatctagttacacgtggtaactaaagataaagtacaaaaagataaaatcataccctaga 9898590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 10504525 - 10504586
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||| ||| |||||||| ||||| ||| |||||||||| || ||||||||||||||||||    
T  10504525 atcttataacgctagcctaaaaagatttagttacacatggcaactaaagataaattacaaaa 10504586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 21687930 - 21687850
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||||||||||||||| |  || ||||||||| ||| | |||| ||| ||||||||| ||||||||||| |||||    
T  21687930 atcttagaaccctagcctataaatatctagttacacatgataact-aagacaaaatacaaaaaggtaaaaacataccctaga 21687850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 32759384 - 32759445
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||| |||| ||||| ||| ||||||| ||||| |||||| |||||||||||    
T  32759384 atcttagaaccctatcctaaaaagatttacttacacacggtaactaaagacaaattacaaaa 32759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14075773 - 14075856
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||| ||||||| ||| |||| ||||| ||| ||||||||||||||| || | |||||||  |||||||||||||||| |||||    
T  14075773 tttattttagaactctaacctaaaaagatttatttacacatggtaattgaaaacaaattac-taaagataaaaacatactctaga 14075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 9519095 - 9519146
Alignment:
Q  37 ttacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  9519095 ttacacatggtaactaaaaacaaattactaaaagataaaaacatacactaga 9519146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 22409339 - 22409265
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||| ||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  22409339 atcttataactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 22409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 2587653 - 2587715
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaa 69  Q
    ||||||||||||||||||| | ||| ||| |||| |||||||| |||| | ||||||||||||    
T  2587653 atcttagaaccctagcctaaacagatttagttacccatggtaactaaaaacaaattacaaaaa 2587715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20175183 - 20175264
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||||||||||| ||||| |||  |||||||||||| |||||| |||||||||||||| |  ||||||| |||||    
T  20175183 atcttagaaccctagcctaaaaagatttagctacacatggtaactaaagacaaattacaaaaagaaatgaacataccctaga 20175264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 24089974 - 24089894
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| |||||||||  |||||||||||||||| |||||    
T  24089974 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaataaattac-taaagataaaaacataccctaga 24089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 25886950 - 25886870
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  25886950 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 25886870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 27908224 - 27908144
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||||| |||||||  |||||||||||||||| |||||    
T  27908224 atcttagaactctaacctaaaaagatttagttacacatggtaactaaagacaaattac-taaagataaaaacataccctaga 27908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 13777474 - 13777546
Alignment:
Q  10 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||||| ||| |||||||  | ||| ||||||||||||| |||||||||  |||||||||||||||||||||    
T  13777474 ttagaactctaacctataagtatttagttacacatggtaactaaagataagatacaaaaagataaaaacatac 13777546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 26652424 - 26652360
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||| |||||||||||| ||||| ||| |||| |||||||| |||||| |||||||||||    
T  26652424 tttatcttaaaaccctagcctaaaaagatttagttactcatggtaactaaagacaaattacaaaa 26652360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 23010839 - 23010765
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||||||||||| ||||||||| |  || ||||||||| ||| ||| || ||| |||||||||||||||||||||    
T  23010839 atcttagaaccctggcctataaatatctagttacacatgataactaa-gacaaaatacaaaaagataaaaacatac 23010765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 32086378 - 32086448
Alignment:
Q  10 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 81  Q
    |||||||||||||||||||| |  || ||||||||| ||| ||| || ||| ||||||||||||||||||||    
T  32086378 ttagaaccctagcctataaatatctagttacacatgataactaa-gacaaaatacaaaaagataaaaacata 32086448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 8502234 - 8502173
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||||||||  |||| |||  ||| |||||||| |||||| |||||||||||    
T  8502234 atcttagaaccctagcctaacaagatttagctacccatggtaactaaagacaaattacaaaa 8502173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 17629467 - 17629387
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||  ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  17629467 atcttagaattctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 17629387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 17674759 - 17674679
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||  ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  17674759 atcttagaattctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 17674679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 25921874 - 25921954
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| | ||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  25921874 atcttagaacactatcctaaaaagatttagtaacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 25921954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 17350401 - 17350457
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaatta 63  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | ||||||    
T  17350401 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaatta 17350457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 22621226 - 22621286
Alignment:
Q  10 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaag 70  Q
    |||||||||||||||| ||||| ||| ||||||||||||| |||||| |||||||||||||    
T  22621226 ttagaaccctagcctaaaaagatttagttacacatggtaaataaagacaaattacaaaaag 22621286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 16360847 - 16360914
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataa 74  Q
    ||||||||||||||||||||||| |  || ||||||||||||| |||||| ||| |||||||||||||    
T  16360847 atcttagaaccctagcctataaatatctagttacacatggtaactaaagacaaaatacaaaaagataa 16360914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 27116904 - 27116833
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaac 78  Q
    |||||||||||||||| || ||| | ||| ||||||||||||| |||||| ||||| |||||||||||||||    
T  27116904 atcttagaaccctagcttaaaaatatttagttacacatggtaactaaagacaaatttcaaaaagataaaaac 27116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 10063751 - 10063690
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||||||| ||||| ||| |||  |||||||| |||||| |||||||||||    
T  10063751 atcttagaaccctagcctaaaaagatttagttattcatggtaactaaagacaaattacaaaa 10063690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 15527602 - 15527521
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||||||  | ||| ||| ||||||||| |||||| ||  ||||||||||||||||||||| |||||    
T  15527602 atcttagaactctaacctataactatttagttatacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 15527521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 21333818 - 21333738
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||| ||||| |||||    
T  21333818 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaagcataccctaga 21333738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 23035745 - 23035664
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||||||  | ||| ||||||||||||| |||||| ||  |||||||| |||||||||||| |||||    
T  23035745 atcttagaactctaacctataactacttagttacacatggtaactaaagacaacatacaaaaatataaaaacataccctaga 23035664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33191713 - 33191793
Alignment:
Q  1 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||| ||||||||||| ||||||||||| |  || |||||| || ||||||| || ||| |||||||||||||||||||||    
T  33191713 agattcatcttagaaccgtagcctataaatatctagttacacgtgataattaa-gacaaaatacaaaaagataaaaacatac 33191793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 18528297 - 18528218
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctag 87  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||| ||||| ||||    
T  18528297 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaagcataccctag 18528218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15812207 - 15812132
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacat-ggtaattaaagataaattacaaaaagataaaaacata 81  Q
    |||||||||| ||| |||||||  ||||| ||||| || ||||| |||||||||  ||||||||||||||||||||    
T  15812207 atcttagaactctaacctataactaattagttacaaattggtaactaaagataagatacaaaaagataaaaacata 15812132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 21983787 - 21983713
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  21983787 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 21983713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 31235023 - 31234946
Alignment:
Q  10 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||| ||| |||||||||||||| | |||||||||||||||| | |||| |   |||||||||||||||| |||||    
T  31235023 ttagaactctaacctataaagaattagtaacacatggtaattaaaaacaaatca-gtaaagataaaaacataccctaga 31234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 15543072 - 15542992
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| | || ||||||||||||| |||||||||  ||| | |||||||  |||||||||||||||| |||||    
T  15543072 atcttagaactctaacgtaaaaagaattaattatacatggtaacaaaaaacaaattac-taaagataaaaacataccctaga 15542992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 17443222 - 17443283
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||| ||||| ||||| ||| |||| |||||| | |||||| |||||||||||    
T  17443222 atcttagaaccctggcctaaaaagatttagttacccatggtgactaaagacaaattacaaaa 17443283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 18735306 - 18735226
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  ||||||||||||| || |||||    
T  18735306 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacaaaccctaga 18735226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 24055020 - 24055100
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| | || ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  24055020 atcttagaactctaacataaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 24055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 26612107 - 26612027
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||| ||||||||| |||| | ||||||| ||| ||||||||||||| |||||    
T  26612107 atcttagaactctatcctaaaaagatttagttaaacatggtaactaaaaacaaattactaaa-gataaaaacataccctaga 26612027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 28009153 - 28009233
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||  ||| |||| ||||| ||| ||||||||||||  |||| |||||||||  |||||||||||||||| |||||    
T  28009153 atcttagaatactaacctaaaaagatttagttacacatggtagctaaaaataaattac-taaagataaaaacataccctaga 28009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 13267199 - 13267258
Alignment:
Q  22 cctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||| ||||||||| ||||||||||||| |||| |||||||||  || |||||||||||||    
T  13267199 cctaaaaagaattagttacacatggtaactaaaaataaattac-taaggataaaaacatac 13267258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 21450117 - 21450196
Alignment:
Q  8 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||| ||| |||| ||||| ||| ||||||||||||  |||| |||||||||  ||||||||||| |||| |||||    
T  21450117 tcttagaactctaacctaaaaagatttagttacacatggtacctaaaaataaattac-taaagataaaaatataccctaga 21450196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16590 - 16676
Alignment:
Q  1 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||||||||| ||| |||  ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  16590 agatttatcttagaactctaacctcaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 16676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 12330400 - 12330474
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| |||||||||  ||||||||||||||||    
T  12330400 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaataaattac-taaagataaaaacatac 12330474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 9134136 - 9134216
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||| ||||||||| |||| | ||||||| ||| |||||||||||||||||||    
T  9134136 atcttagaactctaacctaaaaagaattagttatacatggtaactaaaaacaaattactaaa-gataaaaacatacgctaga 9134216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 9501316 - 9501377
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||| |||||| ||||||    
T  9501316 atcttagaaccctagcctaaaaagatttaattacccatggtaactaaaaataaatcacaaaa 9501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 18448941 - 18449002
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||| ||| ||||| ||| ||||||||||||| |||||| |||||||||||    
T  18448941 atcttagaaccctagactaaaaagatttagttacacatggtaactaaagacaaattacaaaa 18449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 18362768 - 18362691
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||||||||||| ||| |||| ||| ||||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  18362768 tttatcttagaactctaacctaaaaataattagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 18362691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 25692119 - 25692192
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 81  Q
    |||||||||  ||| |||| ||||||||| ||||||||||||| |||| |||||||||  |||||||||||||||    
T  25692119 atcttagaattctaacctaaaaagaattagttacacatggtaactaaaaataaattac-taaagataaaaacata 25692192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 8053168 - 8053088
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||| |||||||| |||||    
T  8053168 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagatagaaacataccctaga 8053088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 8978059 - 8977979
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  8978059 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaaaaaattac-taaagataaaaacataccctaga 8977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 9917509 - 9917590
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||||||| ||| ||| | ||| | ||||||||||| |||||| |||||||||||| |  ||||||||| |||||    
T  9917509 atcttagaaccctagtctaaaaatatttagtcacacatggtaactaaagacaaattacaaaaaaaataaaacataccctaga 9917590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 9925421 - 9925502
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||||||| ||| ||| | ||| | ||||||||||| |||||| |||||||||||| |  ||||||||| |||||    
T  9925421 atcttagaaccctagtctaaaaatatttagtcacacatggtaactaaagacaaattacaaaaaaaataaaacataccctaga 9925502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 23297695 - 23297775
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  23297695 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatacactaga 23297775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 39272221 - 39272141
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  39272221 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 39272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 6007015 - 6007090
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||||||||| || ||||  |||| ||| ||||||||||||| |||||| ||||||   ||||||||||||||||    
T  6007015 atcttagaaccataacctaataagatttagttacacatggtaactaaagacaaattatttaaagataaaaacatac 6007090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8310558 - 8310472
Alignment:
Q  1 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||| ||||||||||||||||||||||| |  || ||||||||| ||| | |||  ||| ||||||||||||||||| ||| |||||    
T  8310558 agattcatcttagaaccctagcctataaatatctagttacacatgataact-aaggcaaaatacaaaaagataaaaacctactctaga 8310472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 19154261 - 19154336
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||||||  | ||| ||||||||||||| |||||| |   |||||||||||||||||||||    
T  19154261 atcttagaactctaacctataactacttagttacacatggtaactaaagacatgatacaaaaagataaaaacatac 19154336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 20753660 - 20753735
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||||| ||| |||||||  | ||| ||||||||||||| |||||| |   |||||||||||||||||||||    
T  20753660 atcttagaactctaacctataactacttagttacacatggtaactaaagacatgatacaaaaagataaaaacatac 20753735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 21884354 - 21884296
Alignment:
Q  10 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||| ||||||| ||||| ||| |||| |||||||| |||||| |||||||||||    
T  21884354 ttagaaccttagcctaaaaagatttagttactcatggtaactaaagacaaattacaaaa 21884296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 2565483 - 2565563
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||| | ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  2565483 atcttagacctctaacctaaaaagatttatttacacatggtaactaaaaacaaattac-gaaagataaaaacataccctaga 2565563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 2570322 - 2570277
Alignment:
Q  37 ttacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||    
T  2570322 ttacacatggtaactaaagacaagatacaaaaagataaaaacatac 2570277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 2573736 - 2573691
Alignment:
Q  37 ttacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||    
T  2573736 ttacacatggtaactaaagacaagatacaaaaagataaaaacatac 2573691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 10938611 - 10938672
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||||||| ||||| ||| ||||  | ||||| |||||| |||||||||||    
T  10938611 atcttagaaccctagcctaaaaagatttagttacttagggtaactaaagacaaattacaaaa 10938672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 13708485 - 13708546
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||||||| | ||| ||| |  |||||||||| |||||| |||||||||||    
T  13708485 atcttagaaccctagcctacagagatttagtatcacatggtaactaaagacaaattacaaaa 13708546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 9264099 - 9264038
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||||||||||| | ||| |||| |||||||| |||||| |||||||||||    
T  9264099 atcttagaaccctagcctataaatatttagttactcatggtaactaaagacaaattacaaaa 9264038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 7583343 - 7583423
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  7583343 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 7583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 10105628 - 10105708
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| |||  ||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  10105628 atcttagaactctaaactaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 10105708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 12578052 - 12577972
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| | || ||||| ||| |||||||||||||||||| | |||||||  |||||||||||||||| |||||    
T  12578052 atcttagaactctaacataaaaagatttagttacacatggtaattaaaaacaaattac-taaagataaaaacataccctaga 12577972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 14572791 - 14572872
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||| ||  |||  |||| ||| ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  14572791 atcttagaaccataatctaataagatttagttacacatggtaactaaacacaaattactaaaagataaaaacatacactaga 14572872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 15049283 - 15049222
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||| || | ||||| ||| |||| |||||||| ||||||||||||||||||    
T  15049283 atcttagaaccctatccaaaaaagatttagttactcatggtaactaaagataaattacaaaa 15049222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 15105141 - 15105202
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||| || | ||||| ||| |||| |||||||| ||||||||||||||||||    
T  15105141 atcttagaaccctatccaaaaaagatttagttactcatggtaactaaagataaattacaaaa 15105202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 19547813 - 19547752
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||| ||||||| |||| |||| |||| |||||||| |||||| |||||||||||    
T  19547813 atcttagaaccttagcctaaaaaggattagttactcatggtaactaaagacaaattacaaaa 19547752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 1832673 - 1832613
Alignment:
Q  8 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||||||| ||||| ||| |||  |||||||| |||||| |||||||||||    
T  1832673 tcttagaaccctagcctaaaaagagttagttattcatggtaactaaagacaaattacaaaa 1832613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 18448172 - 18448112
Alignment:
Q  8 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||| |||| ||||| |||||||| |||||||| |||||| |||| ||||||    
T  18448172 tcttagaaccctatcctaaaaagatttaattactcatggtaactaaagacaaataacaaaa 18448112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 23975169 - 23975229
Alignment:
Q  8 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||| || ||||| ||| |||||||||| || |||||| |||||||||||    
T  23975169 tcttagaaccctagcttaaaaagatttagttacacatggcaactaaagacaaattacaaaa 23975229  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 5529311 - 5529392
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagata-aaaacatacgctaga 88  Q
    |||||||||||||| |||| ||||| ||| |||| |||||||| |||||| |||||| ||||||| | ||||||||| |||||    
T  5529311 atcttagaaccctaacctaaaaagatttagttactcatggtaactaaagacaaatta-aaaaagaaataaaacataccctaga 5529392  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 11520234 - 11520173
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    |||||||||||||||| || ||||  |||||||  |||||||| |||||| |||||||||||    
T  11520234 atcttagaaccctagcataaaaaggtttaattattcatggtaactaaagacaaattacaaaa 11520173  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 11781886 - 11781966
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||| | ||| ||||  |||||||||||||||||| ||| |||| | |||||||  |||||||||||||||| |||||    
T  11781886 atcttagatctctaacctaacaagaattaattacacatgataactaaaaacaaattac-taaagataaaaacataccctaga 11781966  T

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Target: scaffold0386 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 14280 - 14197
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||||||||||||||||||  | ||| ||||||||| |||   |||| ||| |||||||||||||||| ||||||||||    
T  14280 tttatcttagaaccctagcctataagtatttagttacacatgataa-ccaagacaaaatacaaaaagataaaaaaatacgctaga 14197  T

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Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22308 - 22394
Alignment:
Q  1 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||| |||||||||| ||| |||| ||| | ||| |||||||||||||||||| | |||||||  |||||||||||||||| |||||    
T  22308 agattcatcttagaactctaacctaaaaatatttagttacacatggtaattaaaaacaaattac-taaagataaaaacataccctaga 22394  T

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Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 53824 - 53904
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  53824 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 53904  T

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Target: scaffold1156 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 592 - 672
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| |||  ||| ||||| ||| ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  592 atcttagaactctaaactaaaaagatttagttacacatggtaactaaaaacaaattac-aaaagataaaaacataccctaga 672  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 73004 - 73084
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||| ||||||||||| |||||    
T  73004 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaaaaaattac-taaagttaaaaacataccctaga 73084  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 27473 - 27530
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattac 64  Q
    ||||||||||||||||||| ||| | ||| ||||| |||||||||||||| |||||||    
T  27473 atcttagaaccctagcctaaaaatatttagttacatatggtaattaaagacaaattac 27530  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 244585 - 244504
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    ||||||||||| ||  |||  |||| ||| ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  244585 atcttagaaccataatctaataagatttagttacacatggtaactaaacacaaattactaaaagataaaaacatacactaga 244504  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 40620 - 40702
Alignment:
Q  4 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctag 87  Q
    ||||||||||||||||| |||||||| |  || ||||||||| ||| | |||| ||| || |||||||||||||||||| ||||    
T  40620 tttatcttagaaccctaacctataaatatctagttacacatgataact-aagacaaaatataaaaagataaaaacataccctag 40702  T

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Target: scaffold1339 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 599 - 644
Alignment:
Q  37 ttacacatggtaattaaagataaattacaaaaagataaaaacatac 82  Q
    |||||||| |||| |||||| |||||||||||| ||||||||||||    
T  599 ttacacatagtaactaaagacaaattacaaaaaaataaaaacatac 644  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 23362 - 23423
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 68  Q
    ||||||||||||||||||| ||||  ||| | || |||||||| |||||| |||||||||||    
T  23362 atcttagaaccctagcctaaaaagggttagtcactcatggtaactaaagacaaattacaaaa 23423  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 81064 - 81144
Alignment:
Q  7 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 88  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| |  ||||||  |||||||||||||||| |||||    
T  81064 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaaataattac-taaagataaaaacataccctaga 81144  T

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