View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2720_high_4 (Length: 253)

Name: NF2720_high_4
Description: NF2720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2720_high_4
NF2720_high_4
[»] chr3 (36 HSPs)
chr3 (3-212)||(19646824-19647033)
chr3 (211-253)||(2239225-2239268)
chr3 (211-253)||(28097415-28097458)
chr3 (211-253)||(1589066-1589108)
chr3 (213-253)||(787099-787140)
chr3 (206-253)||(25126270-25126318)
chr3 (211-253)||(2118711-2118754)
chr3 (211-253)||(9153475-9153518)
chr3 (211-253)||(30761072-30761115)
chr3 (211-253)||(32205119-32205162)
chr3 (211-253)||(33576681-33576724)
chr3 (207-253)||(36567147-36567194)
chr3 (211-253)||(41223511-41223554)
chr3 (211-253)||(53531804-53531847)
chr3 (212-253)||(19914475-19914517)
chr3 (208-253)||(21841983-21842029)
chr3 (212-253)||(31117619-31117661)
chr3 (212-253)||(38511929-38511971)
chr3 (212-253)||(47943732-47943774)
chr3 (213-253)||(2118986-2119027)
chr3 (213-253)||(17483830-17483871)
chr3 (213-253)||(41282119-41282160)
chr3 (213-253)||(45760505-45760546)
chr3 (216-253)||(47922362-47922399)
chr3 (212-253)||(51187960-51188001)
chr3 (213-253)||(51213307-51213348)
chr3 (213-253)||(53191235-53191276)
chr3 (213-252)||(17483561-17483601)
chr3 (163-202)||(19653742-19653782)
chr3 (206-253)||(26012940-26012988)
chr3 (210-253)||(29918120-29918164)
chr3 (210-253)||(29967273-29967317)
chr3 (213-252)||(41722257-41722297)
chr3 (212-251)||(44624500-44624540)
chr3 (212-247)||(51860333-51860369)
chr3 (214-253)||(52613594-52613634)
[»] chr2 (32 HSPs)
chr2 (88-159)||(18762603-18762674)
chr2 (88-159)||(18773393-18773464)
chr2 (22-84)||(18773223-18773285)
chr2 (211-253)||(19025822-19025865)
chr2 (212-253)||(37334604-37334645)
chr2 (211-253)||(24205292-24205335)
chr2 (211-253)||(31784250-31784293)
chr2 (214-253)||(34981386-34981425)
chr2 (211-253)||(40493917-40493960)
chr2 (211-253)||(40711334-40711377)
chr2 (211-252)||(1467081-1467123)
chr2 (216-253)||(16238495-16238533)
chr2 (215-253)||(19885861-19885899)
chr2 (212-253)||(20436057-20436099)
chr2 (212-253)||(21024733-21024775)
chr2 (212-253)||(22194447-22194489)
chr2 (212-253)||(24895183-24895225)
chr2 (212-253)||(31784523-31784565)
chr2 (212-253)||(33004708-33004750)
chr2 (216-253)||(34981654-34981692)
chr2 (215-253)||(35173086-35173124)
chr2 (211-252)||(40938792-40938834)
chr2 (212-253)||(41072100-41072142)
chr2 (213-253)||(22194720-22194761)
chr2 (213-253)||(38731279-38731320)
chr2 (213-253)||(39642729-39642770)
chr2 (211-243)||(2638818-2638850)
chr2 (207-243)||(18296717-18296753)
chr2 (213-252)||(21552541-21552581)
chr2 (214-253)||(21568197-21568237)
chr2 (210-253)||(32661401-32661445)
chr2 (213-253)||(35180558-35180598)
[»] chr8 (44 HSPs)
chr8 (211-253)||(36624183-36624225)
chr8 (212-253)||(29197298-29197339)
chr8 (212-253)||(38701932-38701973)
chr8 (211-253)||(5734182-5734225)
chr8 (211-253)||(7150840-7150883)
chr8 (212-253)||(4146784-4146826)
chr8 (212-253)||(37205539-37205581)
chr8 (211-253)||(2321514-2321557)
chr8 (211-253)||(6745266-6745309)
chr8 (211-253)||(8870533-8870576)
chr8 (211-253)||(17943356-17943399)
chr8 (211-253)||(18530830-18530873)
chr8 (211-253)||(23234052-23234095)
chr8 (211-253)||(41206404-41206447)
chr8 (211-253)||(44807347-44807390)
chr8 (212-253)||(414927-414969)
chr8 (212-253)||(6014418-6014460)
chr8 (212-253)||(6335600-6335642)
chr8 (212-253)||(15187927-15187969)
chr8 (212-253)||(16531521-16531563)
chr8 (212-253)||(33687759-33687801)
chr8 (211-253)||(36623903-36623945)
chr8 (211-252)||(37639505-37639547)
chr8 (212-253)||(37953373-37953415)
chr8 (216-253)||(42930890-42930928)
chr8 (212-253)||(45106434-45106476)
chr8 (212-253)||(45516192-45516234)
chr8 (213-253)||(4107120-4107161)
chr8 (213-253)||(4167472-4167513)
chr8 (213-253)||(6641870-6641911)
chr8 (212-252)||(7658601-7658642)
chr8 (212-253)||(10285102-10285143)
chr8 (213-253)||(14024312-14024353)
chr8 (213-253)||(16531248-16531289)
chr8 (213-253)||(23233781-23233822)
chr8 (213-253)||(23623421-23623462)
chr8 (213-253)||(27339815-27339856)
chr8 (212-253)||(34608651-34608692)
chr8 (212-252)||(42267455-42267496)
chr8 (213-253)||(42866365-42866406)
chr8 (214-253)||(6335333-6335373)
chr8 (207-243)||(9823385-9823421)
chr8 (213-253)||(18539133-18539173)
chr8 (210-253)||(30359114-30359158)
[»] chr1 (44 HSPs)
chr1 (211-253)||(26932581-26932623)
chr1 (211-253)||(14738-14781)
chr1 (211-253)||(7598878-7598921)
chr1 (212-253)||(16490973-16491015)
chr1 (212-253)||(44846917-44846959)
chr1 (211-253)||(52201364-52201406)
chr1 (213-253)||(6912217-6912257)
chr1 (212-252)||(21697147-21697187)
chr1 (204-248)||(51195957-51196001)
chr1 (212-250)||(15015-15054)
chr1 (211-253)||(1712368-1712411)
chr1 (211-253)||(8770461-8770504)
chr1 (211-253)||(11018674-11018717)
chr1 (207-253)||(15911666-15911713)
chr1 (207-253)||(23342233-23342280)
chr1 (211-253)||(32341764-32341807)
chr1 (211-253)||(39427409-39427452)
chr1 (211-253)||(42406881-42406924)
chr1 (211-253)||(49227118-49227161)
chr1 (211-253)||(52143437-52143480)
chr1 (212-253)||(20471684-20471726)
chr1 (212-253)||(20559811-20559853)
chr1 (216-253)||(22071166-22071204)
chr1 (212-253)||(22204304-22204346)
chr1 (212-253)||(23341963-23342005)
chr1 (212-253)||(26811452-26811494)
chr1 (212-253)||(33811697-33811739)
chr1 (212-253)||(33871167-33871209)
chr1 (212-253)||(37028927-37028969)
chr1 (212-253)||(39427685-39427727)
chr1 (212-253)||(45884947-45884989)
chr1 (213-253)||(6183254-6183295)
chr1 (213-253)||(6491688-6491729)
chr1 (211-252)||(6606534-6606575)
chr1 (216-252)||(6809342-6809379)
chr1 (213-253)||(13791847-13791888)
chr1 (213-253)||(21932060-21932101)
chr1 (213-253)||(22075623-22075664)
chr1 (213-253)||(27855563-27855604)
chr1 (213-253)||(38622675-38622716)
chr1 (212-252)||(43914853-43914894)
chr1 (213-253)||(52149786-52149827)
chr1 (205-252)||(12690013-12690061)
chr1 (213-253)||(43677374-43677414)
[»] chr7 (39 HSPs)
chr7 (212-253)||(45863022-45863063)
chr7 (213-253)||(17802180-17802220)
chr7 (212-252)||(37858326-37858366)
chr7 (211-253)||(23740262-23740305)
chr7 (211-252)||(10350804-10350846)
chr7 (212-253)||(16879234-16879276)
chr7 (211-253)||(17167853-17167895)
chr7 (212-253)||(38882369-38882411)
chr7 (213-253)||(42997324-42997365)
chr7 (202-253)||(10318880-10318932)
chr7 (211-253)||(3925791-3925834)
chr7 (211-253)||(18852493-18852536)
chr7 (211-253)||(23909893-23909936)
chr7 (211-253)||(29163098-29163141)
chr7 (211-253)||(34533485-34533528)
chr7 (211-253)||(43408476-43408519)
chr7 (212-253)||(930980-931022)
chr7 (216-253)||(7195459-7195497)
chr7 (212-253)||(9629288-9629330)
chr7 (212-253)||(19778526-19778568)
chr7 (212-253)||(21917522-21917564)
chr7 (212-253)||(25986924-25986966)
chr7 (212-253)||(30140919-30140961)
chr7 (212-253)||(35121685-35121727)
chr7 (211-253)||(36203994-36204036)
chr7 (212-253)||(37452321-37452363)
chr7 (212-253)||(47258962-47259004)
chr7 (213-253)||(388173-388214)
chr7 (213-253)||(4061260-4061301)
chr7 (213-253)||(8409093-8409134)
chr7 (213-253)||(10319165-10319206)
chr7 (213-253)||(26612615-26612656)
chr7 (213-253)||(30699296-30699337)
chr7 (213-253)||(38445678-38445719)
chr7 (212-253)||(40790943-40790984)
chr7 (214-253)||(25036033-25036073)
chr7 (206-253)||(27513073-27513121)
chr7 (207-253)||(38882645-38882693)
chr7 (213-253)||(44434186-44434226)
[»] scaffold2010 (1 HSPs)
scaffold2010 (199-253)||(479-534)
[»] chr6 (24 HSPs)
chr6 (211-253)||(11277624-11277667)
chr6 (208-253)||(1897151-1897197)
chr6 (213-253)||(9952187-9952227)
chr6 (211-253)||(2565076-2565119)
chr6 (211-253)||(2565351-2565394)
chr6 (211-253)||(34705374-34705417)
chr6 (211-253)||(378511-378553)
chr6 (216-253)||(10977930-10977968)
chr6 (212-253)||(11322297-11322339)
chr6 (212-253)||(14997008-14997050)
chr6 (212-253)||(29696847-29696889)
chr6 (212-253)||(30965690-30965732)
chr6 (211-252)||(31740767-31740809)
chr6 (213-253)||(1814976-1815017)
chr6 (212-252)||(2100654-2100695)
chr6 (213-253)||(8160599-8160640)
chr6 (213-253)||(10977658-10977699)
chr6 (212-252)||(11109007-11109048)
chr6 (213-253)||(11746251-11746292)
chr6 (205-253)||(20080110-20080159)
chr6 (213-253)||(28930736-28930777)
chr6 (206-253)||(30239476-30239524)
chr6 (214-253)||(31833267-31833307)
chr6 (213-252)||(32591876-32591916)
[»] scaffold0272 (2 HSPs)
scaffold0272 (212-253)||(10833-10875)
scaffold0272 (211-253)||(21121-21164)
[»] scaffold0047 (1 HSPs)
scaffold0047 (211-253)||(63336-63378)
[»] chr4 (41 HSPs)
chr4 (212-253)||(39332318-39332360)
chr4 (211-253)||(54606886-54606928)
chr4 (201-248)||(35835764-35835812)
chr4 (213-252)||(48277916-48277956)
chr4 (211-253)||(5344268-5344311)
chr4 (211-253)||(11530032-11530075)
chr4 (211-253)||(12640818-12640861)
chr4 (211-253)||(24296772-24296815)
chr4 (211-253)||(34362818-34362861)
chr4 (211-253)||(44921882-44921925)
chr4 (211-253)||(45289772-45289815)
chr4 (211-253)||(46282758-46282801)
chr4 (211-253)||(47853974-47854017)
chr4 (212-253)||(232963-233005)
chr4 (212-253)||(7644456-7644498)
chr4 (212-253)||(10046208-10046250)
chr4 (212-253)||(13607916-13607958)
chr4 (212-253)||(18988178-18988220)
chr4 (212-253)||(21537149-21537191)
chr4 (212-253)||(26675052-26675094)
chr4 (212-253)||(31250741-31250783)
chr4 (212-253)||(39136297-39136339)
chr4 (212-253)||(49869691-49869733)
chr4 (212-253)||(10726208-10726249)
chr4 (212-253)||(10939977-10940018)
chr4 (212-252)||(14578713-14578754)
chr4 (213-253)||(17554318-17554359)
chr4 (213-253)||(19956996-19957037)
chr4 (213-253)||(34363090-34363131)
chr4 (212-252)||(38371270-38371311)
chr4 (209-253)||(41205494-41205539)
chr4 (216-253)||(47096697-47096734)
chr4 (213-252)||(3556187-3556227)
chr4 (216-251)||(4107508-4107544)
chr4 (216-252)||(9695368-9695404)
chr4 (213-252)||(13019273-13019313)
chr4 (214-253)||(22159830-22159870)
chr4 (212-251)||(24542753-24542793)
chr4 (211-243)||(36095815-36095847)
chr4 (211-243)||(43051276-43051308)
chr4 (214-253)||(44932873-44932913)
[»] chr5 (27 HSPs)
chr5 (213-253)||(15738074-15738115)
chr5 (211-253)||(2546644-2546687)
chr5 (211-253)||(2710609-2710652)
chr5 (211-253)||(16597312-16597355)
chr5 (211-253)||(23263143-23263186)
chr5 (211-253)||(28736712-28736755)
chr5 (215-253)||(29401092-29401131)
chr5 (206-252)||(30894389-30894436)
chr5 (211-253)||(34082373-34082416)
chr5 (211-253)||(34606642-34606685)
chr5 (211-253)||(35306974-35307017)
chr5 (211-253)||(40687664-40687707)
chr5 (212-253)||(3020866-3020908)
chr5 (212-253)||(10331955-10331997)
chr5 (212-253)||(12049389-12049431)
chr5 (212-253)||(13765258-13765300)
chr5 (215-253)||(20040983-20041021)
chr5 (212-253)||(31456133-31456175)
chr5 (212-253)||(34734345-34734387)
chr5 (212-253)||(37887671-37887713)
chr5 (212-253)||(40687941-40687983)
chr5 (213-253)||(8339959-8340000)
chr5 (212-252)||(25631085-25631126)
chr5 (213-253)||(26323647-26323688)
chr5 (213-253)||(32555764-32555805)
chr5 (213-253)||(34169060-34169101)
chr5 (211-243)||(11350806-11350838)
[»] scaffold0182 (1 HSPs)
scaffold0182 (211-253)||(20593-20636)
[»] scaffold0227 (1 HSPs)
scaffold0227 (212-253)||(762-804)
[»] scaffold0014 (1 HSPs)
scaffold0014 (212-253)||(79259-79301)
[»] scaffold0592 (1 HSPs)
scaffold0592 (212-252)||(8983-9024)
[»] scaffold0005 (1 HSPs)
scaffold0005 (212-252)||(238621-238662)
[»] scaffold0001 (1 HSPs)
scaffold0001 (205-253)||(400978-401027)
[»] scaffold0370 (2 HSPs)
scaffold0370 (210-253)||(10900-10944)
scaffold0370 (210-253)||(16190-16234)


Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 19647033 - 19646824
Alignment:
Q  3 acaatgtgaatagcaattgatgtcatcacatctattgaatatacttgtgcatgtgcctgcttccactgttgaatattgcactgtggcaatggtggctagg 102  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19647033 acaatgtgaagagcaatctatgtcatcacatctattgaatatacttgtgcatgtgcctgcttccactgttgaatattgcactgtggcaatggtggctagg 19646934  T
Q  103 atgacaaagaaataaaagaaattggagatgtggtttgccattagtaaacaattctttgctatgtaaaagattatatcaaattttttcggatcaataaata 202  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19646933 atgacaaagaaataaaagaaatttgagatgtggtttgccattagtaaacaattctttgctatgtaaaagattatatcaaattttttcggatcaataaata 19646834  T
Q  203 taataaacaa 212  Q
    ||||||||||    
T  19646833 taataaacaa 19646824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2239225 - 2239268
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  2239225 aaggcttaattgcatttttggacccctatcttttcaaaagttgc 2239268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 28097415 - 28097458
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  28097415 aaggcttaattgcatttttggacccctatcttttcaaaagttgc 28097458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 1589066 - 1589108
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||| ||||||| ||||||||||||||||||||||||||||||    
T  1589066 aaggtttaattgtatttttgacccctatcttttcaaaagttgc 1589108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 787099 - 787140
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  787099 ggcttaattgcatttttggacccctatcttttcaaaagttgc 787140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 25126318 - 25126270
Alignment:
Q  206 taaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  25126318 taaactaggcttaattgcacttttggacccctatcttttcaaaagttgc 25126270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2118711 - 2118754
Alignment:
Q  211 aaggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  2118711 aaggcttaattgcacttttagacccctatcttttcaaaagttgc 2118754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 9153475 - 9153518
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  9153475 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 9153518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 30761115 - 30761072
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  30761115 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 30761072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 32205162 - 32205119
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  32205162 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 32205119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 33576724 - 33576681
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  33576724 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 33576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 36567194 - 36567147
Alignment:
Q  207 aaacaaggcttaattgcatttttgacc-cctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||    
T  36567194 aaacaaggcttaattgcatttttggcctcctaacttttcaaaagttgc 36567147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 41223511 - 41223554
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  41223511 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 41223554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 53531804 - 53531847
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  53531804 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 53531847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 19914475 - 19914517
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  19914475 aggcttaattgcacttttggacccctatcttttcaaaagttgc 19914517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 21842029 - 21841983
Alignment:
Q  208 aacaaggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||||    
T  21842029 aacaaggcttaattgcacttttagacctctatcttttcaaaagttgc 21841983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 31117619 - 31117661
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  31117619 aggcttaattgcacttttggacccctatcttttcaaaagttgc 31117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 38511971 - 38511929
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  38511971 aggcttaattgcacttttggacccctatcttttcaaaagttgc 38511929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 47943774 - 47943732
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  47943774 aggcttaattgcacttttggacccctatcttttcaaaagttgc 47943732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 2119027 - 2118986
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  2119027 ggcttaattgcacttttggacccctatcttttcaaaagttgc 2118986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 17483871 - 17483830
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  17483871 ggcttaattgcacttttggacccctatcttttcaaaagttgc 17483830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 41282160 - 41282119
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  41282160 ggcttaattgcacttttggacccctatcttttcaaaagttgc 41282119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 45760546 - 45760505
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  45760546 ggcttaattgcacttttggacccctatcttttcaaaagttgc 45760505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 47922399 - 47922362
Alignment:
Q  216 ttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  47922399 ttaattgcacttttaacccctatcttttcaaaagttgc 47922362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 51188001 - 51187960
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||| ||||||||| |||||||||    
T  51188001 aggcttaattgcacttttgacctctatctttttaaaagttgc 51187960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 51213307 - 51213348
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  51213307 ggcttaattgcacttttggacccctatcttttcaaaagttgc 51213348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 53191276 - 53191235
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  53191276 ggcttaattgcatttttggacccctatctttccaaaagttgc 53191235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 17483561 - 17483601
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  17483561 ggcttaattgcacttttggacccctatcttttcaaaagttg 17483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 19653782 - 19653742
Alignment:
Q  163 atgtaaaagattatatcaaatt-ttttcggatcaataaata 202  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  19653782 atgtaaaagattatatcaaatttttttcggatcaagaaata 19653742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 26012988 - 26012940
Alignment:
Q  206 taaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||| |||| ||||||||||||||| || ||||||||||||||||||||    
T  26012988 taaaaaaggtttaattgcatttttggactcctatcttttcaaaagttgc 26012940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 29918120 - 29918164
Alignment:
Q  210 caaggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||    
T  29918120 caaggcttaattgcatctttggccccctatcttttcaaaagttgc 29918164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 29967273 - 29967317
Alignment:
Q  210 caaggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||    
T  29967273 caaggcttaattgcatctttggccccctatcttttcaaaagttgc 29967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 41722297 - 41722257
Alignment:
Q  213 ggcttaattgcatttttga-cccctatcttttcaaaagttg 252  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  41722297 ggcttaattgcacttttgaacccctatcttttcaaaagttg 41722257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 44624540 - 44624500
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagtt 251  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  44624540 aggcttaattgcacttttggacccctatcttttcaaaagtt 44624500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 51860333 - 51860369
Alignment:
Q  212 aggcttaattgcattttt-gacccctatcttttcaaa 247  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51860333 aggcttaattgcatttttggacccctatcttttcaaa 51860369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 52613634 - 52613594
Alignment:
Q  214 gcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  52613634 gcttaattgcacttttggacccctatcttttcaaaagttgc 52613594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 18762603 - 18762674
Alignment:
Q  88 gcaatggtggctaggatgacaaagaaataaaagaaattggagatgtggtttgccattagtaaacaattcttt 159  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18762603 gcaatggtggctaggatgacaaagaaataaaagaaatttgagatgtggtttgccattagtaaacaattcttt 18762674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 18773393 - 18773464
Alignment:
Q  88 gcaatggtggctaggatgacaaagaaataaaagaaattggagatgtggtttgccattagtaaacaattcttt 159  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18773393 gcaatggtggttaggatgacaaagaaataaaagaaatttgagatgtggtttgccattagtaaacaattcttt 18773464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 18773223 - 18773285
Alignment:
Q  22 atgtcatcacatctattgaatatacttgtgcatgtgcctgcttccactgttgaatattgcact 84  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  18773223 atgtcatcacatctattgaatatacttgtgcatttgcctgcgtccaccgttgaatattgcact 18773285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 19025822 - 19025865
Alignment:
Q  211 aaggcttaattgca-tttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  19025822 aaggcttaattgcactttttgacccctatcttttcaaaagttgc 19025865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 37334604 - 37334645
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  37334604 aggcttaattgcacttttggcccctatcttttcaaaagttgc 37334645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 24205292 - 24205335
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  24205292 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 24205335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 31784250 - 31784293
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  31784250 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 31784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 34981386 - 34981425
Alignment:
Q  214 gcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  34981386 gcttaattgcatttttggaccctatcttttcaaaagttgc 34981425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 40493960 - 40493917
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  40493960 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 40493917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 40711334 - 40711377
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  40711334 aaggcttaattgtatttttggacccctatcttttcaaaagttgc 40711377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 1467123 - 1467081
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  1467123 aaggcttaattgcacttttggacccctatcttttcaaaagttg 1467081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 16238533 - 16238495
Alignment:
Q  216 ttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  16238533 ttaattgcatttttgatcccctatcttttcaaaagttgc 16238495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 19885861 - 19885899
Alignment:
Q  215 cttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  19885861 cttaattgcacttttggcccctatcttttcaaaagttgc 19885899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 20436057 - 20436099
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  20436057 aggcttaattgcacttttggacccctatcttttcaaaagttgc 20436099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 21024775 - 21024733
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  21024775 aggcttaattgcacttttgaccccctatcttttcaaaagttgc 21024733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 22194447 - 22194489
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  22194447 aggcttaatttcatttttggacccctatcttttcaaaagttgc 22194489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 24895225 - 24895183
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  24895225 aggcttaattgcacttttggacccctatcttttcaaaagttgc 24895183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 31784565 - 31784523
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  31784565 aggcttaattgcatttttggatccctatcttttcaaaagttgc 31784523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 33004708 - 33004750
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  33004708 aggcttaattgcacttttggacccctatcttttcaaaagttgc 33004750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 34981692 - 34981654
Alignment:
Q  216 ttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34981692 ttaattgcatttttagacccctatcttttcaaaagttgc 34981654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 35173124 - 35173086
Alignment:
Q  215 cttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  35173124 cttaattgcacttttggcccctatcttttcaaaagttgc 35173086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 40938792 - 40938834
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 252  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  40938792 aaggcttaattgcacttttgaccccctatcttttcaaaagttg 40938834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 41072142 - 41072100
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  41072142 aggcttaattgcatttttggacccctatctttccaaaagttgc 41072100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 22194761 - 22194720
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  22194761 ggcttaattgcacttttggacccctatcttttcaaaagttgc 22194720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 38731279 - 38731320
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  38731279 ggcttaattgcacttttggacccctatcttttcaaaagttgc 38731320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 39642729 - 39642770
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  39642729 ggcttaattgcacttttggacccctatcttttcaaaagttgc 39642770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 2638818 - 2638850
Alignment:
Q  211 aaggcttaattgcatttttgacccctatctttt 243  Q
    ||||||||||||||||||| |||||||||||||    
T  2638818 aaggcttaattgcatttttcacccctatctttt 2638850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 18296753 - 18296717
Alignment:
Q  207 aaacaaggcttaattgcatttttgacccctatctttt 243  Q
    |||||||||||||||||| |||| |||||||||||||    
T  18296753 aaacaaggcttaattgcacttttcacccctatctttt 18296717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 21552541 - 21552581
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  21552541 ggcttaattgcacttttggacccctatcttttcaaaagttg 21552581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 21568237 - 21568197
Alignment:
Q  214 gcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  21568237 gcttaattgcatttttggatccctatcttttcaaaagttgc 21568197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 32661401 - 32661445
Alignment:
Q  210 caaggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  32661401 caaggcttaattgcacttttggccccctatcttttcaaaagttgc 32661445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 35180598 - 35180558
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  35180598 ggcttaattgcacttttggcccctatctttccaaaagttgc 35180558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 36624225 - 36624183
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  36624225 aaggcttaattgcatttttggcccctatcttttcaaaagttgc 36624183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 29197298 - 29197339
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  29197298 aggcttaattgcacttttgacccctatcttttcaaaagttgc 29197339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 38701973 - 38701932
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  38701973 aggcttaattgcacttttgacccctatcttttcaaaagttgc 38701932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 5734182 - 5734225
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  5734182 aaggcttaattgcatttttgaacccctatcttttcaaaagttgc 5734225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 7150840 - 7150883
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  7150840 aaggcttaattgcatttttgaacccctatcttttcaaaagttgc 7150883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 4146784 - 4146826
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  4146784 aggcttaattgcatttttggacccctatcttttcaaaagttgc 4146826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 37205539 - 37205581
Alignment:
Q  212 aggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  37205539 aggcttaattgcatttttgaacccctatcttttcaaaagttgc 37205581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2321514 - 2321557
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  2321514 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 2321557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 6745309 - 6745266
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  6745309 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 6745266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 8870576 - 8870533
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  8870576 aaggcttaattgcatttttgaacccctatctttccaaaagttgc 8870533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 17943356 - 17943399
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  17943356 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 17943399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 18530830 - 18530873
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  18530830 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 18530873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 23234095 - 23234052
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  23234095 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 23234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 41206447 - 41206404
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  41206447 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 41206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 44807390 - 44807347
Alignment:
Q  211 aaggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  44807390 aaggcttaattgcacttttgaccccctatcttttcaaaagttgc 44807347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 414969 - 414927
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  414969 aggcttaattgcacttttggacccctatcttttcaaaagttgc 414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 6014418 - 6014460
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  6014418 aggcttaattgcacttttggacccctatcttttcaaaagttgc 6014460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 6335642 - 6335600
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  6335642 aggcttaattgcacttttggacccctatcttttcaaaagttgc 6335600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 15187927 - 15187969
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  15187927 aggcttaattgcacttttggacccctatcttttcaaaagttgc 15187969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 16531563 - 16531521
Alignment:
Q  212 aggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  16531563 aggcttaattgcacttttagacccctatcttttcaaaagttgc 16531521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 33687801 - 33687759
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  33687801 aggcttaattgcacttttgaccccttatcttttcaaaagttgc 33687759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 36623903 - 36623945
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||    
T  36623903 aaggcttaattgcacttttgactcctatctcttcaaaagttgc 36623945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 37639505 - 37639547
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  37639505 aaggcttaattgcacttttggacccctatcttttcaaaagttg 37639547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 37953373 - 37953415
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  37953373 aggcttaattgcacttttggacccctatcttttcaaaagttgc 37953415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 42930928 - 42930890
Alignment:
Q  216 ttaattgca-tttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  42930928 ttaattgcactttttgacccctatcttttcaaaagttgc 42930890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 45106434 - 45106476
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  45106434 aggcttaattgcacttttggacccctatcttttcaaaagttgc 45106476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 45516234 - 45516192
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  45516234 aggcttaattgcatttttggactcctatcttttcaaaagttgc 45516192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 4107161 - 4107120
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  4107161 ggcttaattgcacttttggacccctatcttttcaaaagttgc 4107120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 4167513 - 4167472
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  4167513 ggcttaattgcacttttggacccctatcttttcaaaagttgc 4167472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 6641911 - 6641870
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  6641911 ggcttaattgcacttttggacccctatcttttcaaaagttgc 6641870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 7658601 - 7658642
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 252  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  7658601 aggcttaattgcacttttgaccccctatcttttcaaaagttg 7658642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 10285102 - 10285143
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  10285102 aggcttaattgcatttttggcccctatctttctaaaagttgc 10285143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 14024353 - 14024312
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  14024353 ggcttaattgcatttttggacccctatctttccaaaagttgc 14024312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 16531248 - 16531289
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  16531248 ggcttaattgtatttttggacccctatcttttcaaaagttgc 16531289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 23233781 - 23233822
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  23233781 ggcttaattgcacttttggacccctatcttttcaaaagttgc 23233822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 23623421 - 23623462
Alignment:
Q  213 ggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  23623421 ggcttaattgcacttttgaccccatatcttttcaaaagttgc 23623462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 27339856 - 27339815
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  27339856 ggcttaattgcatttttggacccctatctttttaaaagttgc 27339815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 34608692 - 34608651
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||||||| |||||||| |||||||||    
T  34608692 aggcttaattgcacttttgacccatatctttttaaaagttgc 34608651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 42267455 - 42267496
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  42267455 aggcttaattgcacttttggacccctatcttttcaaaagttg 42267496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 42866406 - 42866365
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  42866406 ggcttaattgcacttttggacccctatcttttcaaaagttgc 42866365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 6335333 - 6335373
Alignment:
Q  214 gcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  6335333 gcttaattgcacttttggacccctatcttttcaaaagttgc 6335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 9823421 - 9823385
Alignment:
Q  207 aaacaaggcttaattgcatttttgacccctatctttt 243  Q
    |||||||||||||||||| |||| |||||||||||||    
T  9823421 aaacaaggcttaattgcacttttcacccctatctttt 9823385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 18539133 - 18539173
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||||||||||||||  |||||||||    
T  18539133 ggcttaattgcacttttgacccctatctttctaaaagttgc 18539173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 30359158 - 30359114
Alignment:
Q  210 caaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||    
T  30359158 caaggcttaattgcacttttggacccctatctttccaaaagttgc 30359114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 26932581 - 26932623
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  26932581 aaggcttaattgcacttttgacccctatcttttcaaaagttgc 26932623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 14738 - 14781
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14738 aaggcttaattgcatttttggacccctatcttttcaaaagttgc 14781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 7598921 - 7598878
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7598921 aaggcttaattgcatttttggacccctatcttttcaaaagttgc 7598878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 16490973 - 16491015
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  16490973 aggcttaattgcatttttggacccctatcttttcaaaagttgc 16491015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 44846917 - 44846959
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  44846917 aggcttaattgcatttttggacccctatcttttcaaaagttgc 44846959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 52201364 - 52201406
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  52201364 aaggcttaattgcacttttggcccctatcttttcaaaagttgc 52201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 6912217 - 6912257
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  6912217 ggcttaattgcacttttggcccctatcttttcaaaagttgc 6912257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 21697187 - 21697147
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttg 252  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  21697187 aggctcaattgcacttttgacccctatcttttcaaaagttg 21697147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 51196001 - 51195957
Alignment:
Q  204 aataaacaaggcttaattgcatttttgacccctatcttttcaaaa 248  Q
    |||||| || ||||||||||||||||| |||||||||||||||||    
T  51196001 aataaaaaaagcttaattgcatttttggcccctatcttttcaaaa 51195957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 15054 - 15015
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagt 250  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15054 aggcttaattgcatttttggacccctatcttttcaaaagt 15015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 1712368 - 1712411
Alignment:
Q  211 aaggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  1712368 aaggcttaattgcacttttgaccccctatcttttcaaaagttgc 1712411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 8770461 - 8770504
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  8770461 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 8770504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 11018717 - 11018674
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  11018717 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 11018674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 15911666 - 15911713
Alignment:
Q  207 aaacaaggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  15911666 aaacaaggcttaattgcacttttggccccctatcttttcaaaagttgc 15911713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 23342280 - 23342233
Alignment:
Q  207 aaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  23342280 aaacaaggcttaattgcacttttggacccctatctttccaaaagttgc 23342233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 32341807 - 32341764
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  32341807 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 32341764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 39427409 - 39427452
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  39427409 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 39427452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 42406881 - 42406924
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  42406881 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 42406924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 49227118 - 49227161
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  49227118 aaggtttaattgcatttttggacccctatcttttcaaaagttgc 49227161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 52143480 - 52143437
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  52143480 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 52143437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 20471726 - 20471684
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  20471726 aggcttaattgcatttttgaacccctatctttccaaaagttgc 20471684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 20559811 - 20559853
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  20559811 aggcttaattgcatttttgaacccctatctttccaaaagttgc 20559853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 22071166 - 22071204
Alignment:
Q  216 ttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22071166 ttaattgcatttttggacccctatcttttcaaaagttgc 22071204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 22204304 - 22204346
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  22204304 aggcttaattgcacttttggacccctatcttttcaaaagttgc 22204346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 23341963 - 23342005
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  23341963 aggcttaattgcacttttggacccctatcttttcaaaagttgc 23342005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 26811452 - 26811494
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  26811452 aggcttaattgcacttttgaccccctatcttttcaaaagttgc 26811494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 33811739 - 33811697
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  33811739 aggcttaattgcatttttggacccctatctttccaaaagttgc 33811697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 33871209 - 33871167
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  33871209 aggcttaattgcatttttggacccctatctttccaaaagttgc 33871167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 37028927 - 37028969
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  37028927 aggcttaattgcacttttggacccctatcttttcaaaagttgc 37028969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 39427727 - 39427685
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  39427727 aggcttaattgcatttttggacccctatctttccaaaagttgc 39427685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 45884947 - 45884989
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  45884947 aggcttaattgcacttttggacccctatcttttcaaaagttgc 45884989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 6183295 - 6183254
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  6183295 ggcttaattgcacttttggacccctatcttttcaaaagttgc 6183254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 6491729 - 6491688
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  6491729 ggcttaattgcacttttggacccctatcttttcaaaagttgc 6491688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 6606534 - 6606575
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttg 252  Q
    |||||||||||| | ||||| |||||||||||||||||||||    
T  6606534 aaggcttaattgtacttttgccccctatcttttcaaaagttg 6606575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 6809379 - 6809342
Alignment:
Q  216 ttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  6809379 ttaattgcatttttggacccctatcttttcaaaagttg 6809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 13791888 - 13791847
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  13791888 ggcttaattgcacttttggacccctatcttttcaaaagttgc 13791847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 21932101 - 21932060
Alignment:
Q  213 ggcttaattgca-tttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  21932101 ggcttaattgcactttttgccccctatcttttcaaaagttgc 21932060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 22075664 - 22075623
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  22075664 ggcttaattgcacttttggacccctatcttttcaaaagttgc 22075623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 27855563 - 27855604
Alignment:
Q  213 ggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  27855563 ggcttaattgcacttttgaacccctatcttttcaaaagttgc 27855604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 38622716 - 38622675
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  38622716 ggcttaattgcacttttggacccctatcttttcaaaagttgc 38622675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 43914894 - 43914853
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  43914894 aggcttaattgcacttttggacccctatcttttcaaaagttg 43914853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 52149827 - 52149786
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  52149827 ggcttaattgcacttttggacccctatcttttcaaaagttgc 52149786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 12690013 - 12690061
Alignment:
Q  205 ataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||| |||||||||||||| ||||| |||||||||||| |||||||||    
T  12690013 ataaaaaaggcttaattgcacttttggacccctatctttccaaaagttg 12690061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 43677414 - 43677374
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  43677414 ggcttaattgcacttttggaccctatcttttcaaaagttgc 43677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 45863022 - 45863063
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  45863022 aggcttaattgcacttttgacccctatcttttcaaaagttgc 45863063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 17802220 - 17802180
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  17802220 ggcttaattgcacttttgacccctatcttttcaaaagttgc 17802180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 37858366 - 37858326
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttg 252  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  37858366 aggcttaattgcacttttgacccctatcttttcaaaagttg 37858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 23740262 - 23740305
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  23740262 aaggcttaattgcatttttggacccctatcttttcaaaagttgc 23740305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 10350804 - 10350846
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  10350804 aaggcttaattgcatttttggacccctatcttttcaaaagttg 10350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 16879234 - 16879276
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  16879234 aggcttaattgcatttttggacccctatcttttcaaaagttgc 16879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 17167853 - 17167895
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  17167853 aaggcttaattgcacttttggcccctatcttttcaaaagttgc 17167895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 38882369 - 38882411
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  38882369 aggcttaattgcatttttgtacccctatcttttcaaaagttgc 38882411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 42997365 - 42997324
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  42997365 ggcttaattgcatttttggacccctatcttttcaaaagttgc 42997324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 10318880 - 10318932
Alignment:
Q  202 ataataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  10318880 ataaaaaaaaaggcttaattgcacttttggacccctatcttttcaaaagttgc 10318932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 3925791 - 3925834
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  3925791 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 3925834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 18852493 - 18852536
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  18852493 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 18852536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 23909893 - 23909936
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  23909893 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 23909936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 29163098 - 29163141
Alignment:
Q  211 aaggcttaattgca-tttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  29163098 aaggcttaattgcactttttgccccctatcttttcaaaagttgc 29163141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 34533528 - 34533485
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  34533528 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 34533485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 43408519 - 43408476
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  43408519 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 43408476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 931022 - 930980
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  931022 aggcttaattgcacttttggacccctatcttttcaaaagttgc 930980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 7195459 - 7195497
Alignment:
Q  216 ttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7195459 ttaattgcatttttggacccctatcttttcaaaagttgc 7195497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 9629330 - 9629288
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  9629330 aggcttaattgcatttttggacccctatctttccaaaagttgc 9629288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 19778568 - 19778526
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  19778568 aggcttaattgcacttttggacccctatcttttcaaaagttgc 19778526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 21917564 - 21917522
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  21917564 aggcttaattgcacttttggacccctatcttttcaaaagttgc 21917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 25986924 - 25986966
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  25986924 aggcttaattgcacttttggacccctatcttttcaaaagttgc 25986966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 30140919 - 30140961
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  30140919 aggcttaattgcatttttggacccctatctttccaaaagttgc 30140961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 35121727 - 35121685
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  35121727 aggcttaattgcacttttggacccctatcttttcaaaagttgc 35121685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 36203994 - 36204036
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||||||||||||||  |||||||||    
T  36203994 aaggcttaattgcacttttgacccctatctttctaaaagttgc 36204036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 37452363 - 37452321
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  37452363 aggcttaattgcacttttggacccctatcttttcaaaagttgc 37452321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 47258962 - 47259004
Alignment:
Q  212 aggcttaattgcatttttgaccc-ctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  47258962 aggcttaattgcatttttggccctctatcttttcaaaagttgc 47259004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 388214 - 388173
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  388214 ggcttaattgcacttttggacccctatcttttcaaaagttgc 388173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 4061301 - 4061260
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  4061301 ggcttaattgcatttttggacccctatctttccaaaagttgc 4061260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 8409093 - 8409134
Alignment:
Q  213 ggcttaattgcatttttgac-ccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  8409093 ggcttaattgcacttttgacaccctatcttttcaaaagttgc 8409134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 10319206 - 10319165
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  10319206 ggcttaattgcacttttggacccctatcttttcaaaagttgc 10319165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 26612656 - 26612615
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  26612656 ggcttaattgcacttttggacccctatcttttcaaaagttgc 26612615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 30699337 - 30699296
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  30699337 ggcttaattgcacttttggacccctatcttttcaaaagttgc 30699296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 38445719 - 38445678
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  38445719 ggcttaattgcacttttggacccctatcttttcaaaagttgc 38445678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 40790984 - 40790943
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||    
T  40790984 aggcttaattgcacttttggcccctatctttccaaaagttgc 40790943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 25036033 - 25036073
Alignment:
Q  214 gcttaattgca-tttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  25036033 gcttaattgcactttttgacccctatattttcaaaagttgc 25036073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 27513121 - 27513073
Alignment:
Q  206 taaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||| |||||||||||||| ||||| |||||||||||||| ||||||||    
T  27513121 taaaaaaggcttaattgcacttttggacccctatcttttcgaaagttgc 27513073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 38882693 - 38882645
Alignment:
Q  207 aaacaaggcttaattgca-tttttgacccctatctttt-caaaagttgc 253  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  38882693 aaacaaggcttaattgcacttttggacccctatcttttccaaaagttgc 38882645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 44434186 - 44434226
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| ||| ||||||||||||||||||    
T  44434186 ggcttaattgcacttttggcccttatcttttcaaaagttgc 44434226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2010
Description:

Target: scaffold2010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 479 - 534
Alignment:
Q  199 aatataataaacaaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    ||||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  479 aatataaaaaaaaaggcttaattgcacttttgaccccctatcttttcaaaagttgc 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 11277624 - 11277667
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  11277624 aaggcttaattgcatttttggacccctatcttttcaaaagttgc 11277667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 1897197 - 1897151
Alignment:
Q  208 aacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  1897197 aacaaggcttaattgcatttttgaacccctatctttccaaaagttgc 1897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 9952227 - 9952187
Alignment:
Q  213 ggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  9952227 ggcttaattgcacttttgacccctatctttttaaaagttgc 9952187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2565076 - 2565119
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  2565076 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 2565119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 2565394 - 2565351
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  2565394 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 2565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 34705374 - 34705417
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  34705374 aaggcttaattgcatttttggacccctatattttcaaaagttgc 34705417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 378553 - 378511
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||||||||||||||| |||| |||||    
T  378553 aaggcttaattgcacttttgacccctatctttccaaatgttgc 378511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 10977968 - 10977930
Alignment:
Q  216 ttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10977968 ttaattgcatttttggacccctatcttttcaaaagttgc 10977930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 11322339 - 11322297
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  11322339 aggcttaattgcacttttggacccctatcttttcaaaagttgc 11322297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 14997008 - 14997050
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  14997008 aggcttaattgcatttttggacccctatctttccaaaagttgc 14997050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 29696847 - 29696889
Alignment:
Q  212 aggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  29696847 aggcttaattgcacttttagacccctatcttttcaaaagttgc 29696889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 30965690 - 30965732
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  30965690 aggcttaattgcacttttggacccctatcttttcaaaagttgc 30965732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 31740767 - 31740809
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  31740767 aaggcttaattgcacttttggacccctatcttttcaaaagttg 31740809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 1814976 - 1815017
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  1814976 ggcttaattgcacttttggacccctatcttttcaaaagttgc 1815017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 2100695 - 2100654
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  2100695 aggcttaattgcacttttggacccctatcttttcaaaagttg 2100654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 8160599 - 8160640
Alignment:
Q  213 ggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  8160599 ggcttaattgcacttttgatcccctatcttttcaaaagttgc 8160640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 10977658 - 10977699
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  10977658 ggcttaattgcacttttggacccctatcttttcaaaagttgc 10977699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 11109048 - 11109007
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 252  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  11109048 aggcttaattgcacttttgaccccttatcttttcaaaagttg 11109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 11746292 - 11746251
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  11746292 ggcttaattgcacttttggacccctatcttttcaaaagttgc 11746251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 20080110 - 20080159
Alignment:
Q  205 ataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||| |||||||||||||| ||||| |||||||||||| ||||||||||    
T  20080110 ataaataaggcttaattgcacttttggacccctatctttccaaaagttgc 20080159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 28930777 - 28930736
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  28930777 ggcttaattgcacttttggacccctatcttttcaaaagttgc 28930736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 30239524 - 30239476
Alignment:
Q  206 taaacaaggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    |||| |||||||||||||| |||| ||||||||||||| ||||||||||    
T  30239524 taaaaaaggcttaattgcacttttagacccctatctttccaaaagttgc 30239476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 31833267 - 31833307
Alignment:
Q  214 gcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  31833267 gcttaattgcacttttggacccctatcttttcaaaagttgc 31833307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 32591916 - 32591876
Alignment:
Q  213 ggcttaattgcatttttgacccc-tatcttttcaaaagttg 252  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  32591916 ggcttaattgcacttttgaccccctatcttttcaaaagttg 32591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 10875 - 10833
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  10875 aggcttaattgcatttttggacccctatcttttcaaaagttgc 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 21164 - 21121
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  21164 aaggcttaattgcatttttggacccctatctttccaaaagttgc 21121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 63378 - 63336
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  63378 aaggcttaattgcacttttgacccctattttttcaaaagttgc 63336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000009; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 39332318 - 39332360
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  39332318 aggcttaattgcatttttggacccctatcttttcaaaagttgc 39332360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 54606886 - 54606928
Alignment:
Q  211 aaggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  54606886 aaggcttaattgtattttggacccctatcttttcaaaagttgc 54606928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 35835764 - 35835812
Alignment:
Q  201 tataataaacaaggcttaattgca-tttttgacccctatcttttcaaaa 248  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  35835764 tataaaaaacaaggcttaattgcacttttggacccctatcttttcaaaa 35835812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 48277916 - 48277956
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  48277916 ggcttaattgcatttttggacccctatcttttcaaaagttg 48277956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 5344268 - 5344311
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  5344268 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 5344311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 11530075 - 11530032
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  11530075 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 11530032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 12640818 - 12640861
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  12640818 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 12640861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 24296815 - 24296772
Alignment:
Q  211 aaggcttaattgcatttttgacc-cctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  24296815 aaggcttaattgcacttttgacctcctatcttttcaaaagttgc 24296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 34362818 - 34362861
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  34362818 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 34362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 44921925 - 44921882
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  44921925 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 44921882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 45289815 - 45289772
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  45289815 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 45289772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 46282758 - 46282801
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  46282758 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 46282801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 47853974 - 47854017
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  47853974 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 47854017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 233005 - 232963
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  233005 aggcttaattgcacttttggacccctatcttttcaaaagttgc 232963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 7644456 - 7644498
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  7644456 aggcttaattgcacttttggacccctatcttttcaaaagttgc 7644498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 10046250 - 10046208
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  10046250 aggcttaattgcacttttggacccctatcttttcaaaagttgc 10046208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 13607916 - 13607958
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  13607916 aggcttaattgcatttttggacccctatctttccaaaagttgc 13607958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 18988178 - 18988220
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  18988178 aggcttaattgcacttttggacccctatcttttcaaaagttgc 18988220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 21537191 - 21537149
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  21537191 aggcttaattgcacttttggacccctatcttttcaaaagttgc 21537149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 26675052 - 26675094
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  26675052 aggcttaattgcatttttggacccctatctttccaaaagttgc 26675094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 31250783 - 31250741
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  31250783 aggcttaattgcacttttggacccctatcttttcaaaagttgc 31250741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 39136297 - 39136339
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  39136297 aggcttaattgcacttttggacccctatcttttcaaaagttgc 39136339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 49869733 - 49869691
Alignment:
Q  212 aggcttaattgcatttttgacc-cctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  49869733 aggcttaattgcacttttgacctcctatcttttcaaaagttgc 49869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 10726249 - 10726208
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||| ||| |||||||||||||||||||    
T  10726249 aggcttaattgcacttttaaccactatcttttcaaaagttgc 10726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 10940018 - 10939977
Alignment:
Q  212 aggcttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||| ||| |||||||||||||||||||    
T  10940018 aggcttaattgcacttttaaccactatcttttcaaaagttgc 10939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 14578754 - 14578713
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  14578754 aggcttaattgcacttttggacccctatcttttcaaaagttg 14578713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 17554359 - 17554318
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  17554359 ggcttaattgcacttttggacccctatcttttcaaaagttgc 17554318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 19957037 - 19956996
Alignment:
Q  213 ggcttaattgcatttttgaccc-ctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  19957037 ggcttaattgcatttttgatcctctatcttttcaaaagttgc 19956996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 34363131 - 34363090
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  34363131 ggcttaattgcacttttggacccctatcttttcaaaagttgc 34363090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 38371270 - 38371311
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  38371270 aggcttaattgcacttttggacccctatcttttcaaaagttg 38371311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 41205494 - 41205539
Alignment:
Q  209 acaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  41205494 acaaggcttaattgcacttttggacccctatctttccaaaagttgc 41205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 47096734 - 47096697
Alignment:
Q  216 ttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  47096734 ttaattgcacttttggcccctatcttttcaaaagttgc 47096697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 3556227 - 3556187
Alignment:
Q  213 ggcttaattgcatttttgacccc-tatcttttcaaaagttg 252  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  3556227 ggcttaattgcatttttggccccctatcttttcaaaagttg 3556187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 4107508 - 4107544
Alignment:
Q  216 ttaattgcatttttg-acccctatcttttcaaaagtt 251  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4107508 ttaattgcatttttggacccctatcttttcaaaagtt 4107544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 9695404 - 9695368
Alignment:
Q  216 ttaattgcatttttgacccctatcttttcaaaagttg 252  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  9695404 ttaattgcacttttgaccgctatcttttcaaaagttg 9695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 13019273 - 13019313
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  13019273 ggcttaattgcacttttggacccctatcttttcaaaagttg 13019313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 22159830 - 22159870
Alignment:
Q  214 gcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  22159830 gcttaattgcacttttggacccctatcttttcaaaagttgc 22159870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 24542753 - 24542793
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagtt 251  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  24542753 aggcttaattgcacttttggacccctatcttttcaaaagtt 24542793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 36095815 - 36095847
Alignment:
Q  211 aaggcttaattgcatttttgacccctatctttt 243  Q
    ||||||||||||||||||| |||||||||||||    
T  36095815 aaggcttaattgcatttttcacccctatctttt 36095847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 43051308 - 43051276
Alignment:
Q  211 aaggcttaattgcatttttgacccctatctttt 243  Q
    ||||||||||||||||||| |||||||||||||    
T  43051308 aaggcttaattgcatttttcacccctatctttt 43051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 44932913 - 44932873
Alignment:
Q  214 gcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  44932913 gcttaattgcatttttggtcccctatcttttcaaaagttgc 44932873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 15738074 - 15738115
Alignment:
Q  213 ggcttaattgca-tttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  15738074 ggcttaattgcactttttgacccctatcttttcaaaagttgc 15738115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 2546687 - 2546644
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  2546687 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 2546644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 2710652 - 2710609
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  2710652 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 2710609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 16597355 - 16597312
Alignment:
Q  211 aaggcttaattgcatttttga-cccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  16597355 aaggcttaattgcacttttgaacccctatcttttcaaaagttgc 16597312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 23263143 - 23263186
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  23263143 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 23263186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 28736755 - 28736712
Alignment:
Q  211 aaggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  28736755 aaggcttaattgcacttttagacccctatcttttcaaaagttgc 28736712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 29401092 - 29401131
Alignment:
Q  215 cttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  29401092 cttaattgcatttttggacccctatcttttcaaaagttgc 29401131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 30894436 - 30894389
Alignment:
Q  206 taaacaaggcttaattgcattttt-gacccctatcttttcaaaagttg 252  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  30894436 taaaaaaggcttaattgcatttttggatccctatcttttcaaaagttg 30894389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 34082416 - 34082373
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  34082416 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 34082373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 34606685 - 34606642
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  34606685 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 34606642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 35307017 - 35306974
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  35307017 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 35306974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 40687664 - 40687707
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  40687664 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 40687707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 3020908 - 3020866
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  3020908 aggcttaattgcacttttggacccctatcttttcaaaagttgc 3020866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 10331955 - 10331997
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  10331955 aggcttaattgcacttttgaccccctatcttttcaaaagttgc 10331997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 12049431 - 12049389
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  12049431 aggcttaattgcatttttggacccctatctttccaaaagttgc 12049389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 13765258 - 13765300
Alignment:
Q  212 aggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  13765258 aggcttaattgcacttttcgacccctatcttttcaaaagttgc 13765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 20041021 - 20040983
Alignment:
Q  215 cttaattgcatttttgacccctatcttttcaaaagttgc 253  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  20041021 cttaattgcacttttggcccctatcttttcaaaagttgc 20040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 31456175 - 31456133
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  31456175 aggcttaattgcacttttggacccctatcttttcaaaagttgc 31456133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 34734387 - 34734345
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  34734387 aggcttaattgcacttttggacccctatcttttcaaaagttgc 34734345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 37887671 - 37887713
Alignment:
Q  212 aggcttaattgcatttttgacccc-tatcttttcaaaagttgc 253  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  37887671 aggcttaattgcacttttgaccccctatcttttcaaaagttgc 37887713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 40687983 - 40687941
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  40687983 aggcttaattgcacttttggacccctatcttttcaaaagttgc 40687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 8339959 - 8340000
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  8339959 ggcttaattgcacttttggacccctatcttttcaaaagttgc 8340000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 25631085 - 25631126
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  25631085 aggcttaattgcacttttggacccctatcttttcaaaagttg 25631126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 26323688 - 26323647
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  26323688 ggcttaattgcacttttggacccctatcttttcaaaagttgc 26323647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 32555764 - 32555805
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  32555764 ggcttaattgcatttttggacccctatctttttaaaagttgc 32555805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 34169101 - 34169060
Alignment:
Q  213 ggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  34169101 ggcttaattgcacttttggacccctatcttttcaaaagttgc 34169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 11350806 - 11350838
Alignment:
Q  211 aaggcttaattgcatttttgacccctatctttt 243  Q
    ||||||||||||||||||| |||||||||||||    
T  11350806 aaggcttaattgcatttttcacccctatctttt 11350838  T

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Target: scaffold0182 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 20593 - 20636
Alignment:
Q  211 aaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  20593 aaggcttaattgcacttttggacccctatcttttcaaaagttgc 20636  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 762 - 804
Alignment:
Q  212 aggcttaattgcattttt-gacccctatcttttcaaaagttgc 253  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  762 aggcttaattgcatttttagacccctatctttccaaaagttgc 804  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 79301 - 79259
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  79301 aggcttaattgcacttttggacccctatcttttcaaaagttgc 79259  T

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Target: scaffold0592 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 9024 - 8983
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  9024 aggcttaattgcatttttggacccctatctttccaaaagttg 8983  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 238621 - 238662
Alignment:
Q  212 aggcttaattgcatttttg-acccctatcttttcaaaagttg 252  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  238621 aggcttaattgcacttttggacccctatcttttcaaaagttg 238662  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 401027 - 400978
Alignment:
Q  205 ataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||| |||||||||||||| ||||| |||||||||||| ||||||||||    
T  401027 ataaaaaaggcttaattgcacttttggacccctatctttccaaaagttgc 400978  T

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Target: scaffold0370 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 10944 - 10900
Alignment:
Q  210 caaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||    
T  10944 caaggcttaattgcacttttggacccctatctttccaaaagttgc 10900  T

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Target: scaffold0370; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 16234 - 16190
Alignment:
Q  210 caaggcttaattgcatttttg-acccctatcttttcaaaagttgc 253  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||    
T  16234 caaggcttaattgcacttttggacccctatctttccaaaagttgc 16190  T

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