View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2720_low_4 (Length: 335)

Name: NF2720_low_4
Description: NF2720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2720_low_4
NF2720_low_4
[»] chr4 (60 HSPs)
chr4 (136-322)||(45082783-45082969)
chr4 (132-322)||(11153142-11153332)
chr4 (136-322)||(22434179-22434365)
chr4 (135-322)||(20470870-20471057)
chr4 (131-322)||(12234688-12234879)
chr4 (135-322)||(15523234-15523421)
chr4 (136-322)||(25447247-25447433)
chr4 (136-322)||(46193405-46193591)
chr4 (134-322)||(18751597-18751785)
chr4 (133-317)||(48526545-48526729)
chr4 (135-322)||(51021155-51021341)
chr4 (135-322)||(23494802-23494989)
chr4 (133-322)||(25938030-25938219)
chr4 (139-322)||(4219918-4220101)
chr4 (139-322)||(54995072-54995255)
chr4 (133-322)||(2118290-2118480)
chr4 (158-322)||(12503458-12503622)
chr4 (138-296)||(4219559-4219716)
chr4 (134-297)||(15523619-15523781)
chr4 (138-297)||(33109686-33109844)
chr4 (135-297)||(25447621-25447782)
chr4 (135-296)||(12234328-12234488)
chr4 (136-297)||(11153532-11153692)
chr4 (132-297)||(46193790-46193954)
chr4 (135-297)||(25937669-25937830)
chr4 (135-297)||(51020796-51020957)
chr4 (132-297)||(22170322-22170485)
chr4 (133-297)||(23494440-23494603)
chr4 (135-262)||(33109883-33110010)
chr4 (138-297)||(38962204-38962362)
chr4 (139-297)||(54995453-54995609)
chr4 (139-297)||(22434563-22434718)
chr4 (139-297)||(45082435-45082590)
chr4 (135-297)||(48526195-48526355)
chr4 (133-297)||(2118681-2118843)
chr4 (138-250)||(18763951-18764063)
chr4 (136-253)||(35363028-35363146)
chr4 (158-253)||(43243708-43243803)
chr4 (135-250)||(48293593-48293708)
chr4 (143-248)||(20957196-20957301)
chr4 (205-297)||(12503821-12503912)
chr4 (137-253)||(20958288-20958403)
chr4 (139-250)||(48713777-48713888)
chr4 (133-262)||(16690933-16691062)
chr4 (128-264)||(10258304-10258440)
chr4 (158-262)||(43281210-43281313)
chr4 (134-201)||(16318256-16318323)
chr4 (136-262)||(48294961-48295088)
chr4 (135-242)||(48708294-48708401)
chr4 (137-253)||(44892576-44892692)
chr4 (194-262)||(43242328-43242396)
chr4 (136-244)||(55189528-55189636)
chr4 (131-262)||(44890512-44890643)
chr4 (136-262)||(16691491-16691616)
chr4 (235-297)||(17504072-17504133)
chr4 (205-297)||(17504345-17504436)
chr4 (235-297)||(35193406-35193467)
chr4 (278-316)||(10795692-10795730)
chr4 (172-297)||(14439864-14439988)
chr4 (229-297)||(34789768-34789836)
[»] chr8 (30 HSPs)
chr8 (125-322)||(13224998-13225195)
chr8 (135-322)||(19176289-19176476)
chr8 (134-322)||(44831245-44831433)
chr8 (136-322)||(41681493-41681679)
chr8 (138-322)||(33328499-33328683)
chr8 (139-322)||(9928912-9929095)
chr8 (139-322)||(12572210-12572393)
chr8 (133-322)||(11656816-11657005)
chr8 (135-322)||(33742921-33743107)
chr8 (137-322)||(31133579-31133764)
chr8 (135-295)||(34540934-34541094)
chr8 (135-296)||(41681133-41681292)
chr8 (135-297)||(19176675-19176836)
chr8 (135-297)||(31133219-31133380)
chr8 (140-297)||(13224645-13224800)
chr8 (135-291)||(4629796-4629952)
chr8 (133-297)||(9930042-9930205)
chr8 (135-297)||(11656454-11656616)
chr8 (134-297)||(33328156-33328318)
chr8 (135-297)||(12571862-12572024)
chr8 (135-297)||(44831630-44831791)
chr8 (136-297)||(9178021-9178180)
chr8 (230-322)||(9177726-9177818)
chr8 (135-244)||(11336959-11337068)
chr8 (189-297)||(33743304-33743411)
chr8 (139-297)||(4630177-4630328)
chr8 (134-248)||(8073985-8074098)
chr8 (215-262)||(43958264-43958311)
chr8 (241-297)||(18805267-18805322)
chr8 (135-172)||(9177666-9177703)
[»] chr7 (34 HSPs)
chr7 (135-322)||(19590884-19591071)
chr7 (133-322)||(19830779-19830967)
chr7 (135-322)||(2658838-2659025)
chr7 (135-322)||(38859000-38859187)
chr7 (125-322)||(32004603-32004800)
chr7 (135-322)||(34533790-34533977)
chr7 (136-322)||(35288903-35289089)
chr7 (135-322)||(37787126-37787313)
chr7 (135-319)||(23952729-23952914)
chr7 (139-322)||(4641803-4641983)
chr7 (149-322)||(29099863-29100036)
chr7 (120-297)||(37786751-37786927)
chr7 (130-297)||(19830414-19830580)
chr7 (136-297)||(32004999-32005159)
chr7 (136-297)||(19590525-19590685)
chr7 (133-297)||(38858640-38858803)
chr7 (132-297)||(29100236-29100400)
chr7 (134-297)||(4641438-4641600)
chr7 (135-297)||(35289286-35289447)
chr7 (135-297)||(2659225-2659386)
chr7 (135-297)||(34534176-34534337)
chr7 (142-297)||(23953114-23953268)
chr7 (139-297)||(4478085-4478242)
chr7 (130-262)||(28583433-28583565)
chr7 (135-252)||(38160950-38161067)
chr7 (235-322)||(4477800-4477887)
chr7 (137-262)||(28584341-28584466)
chr7 (241-297)||(32427406-32427461)
chr7 (241-296)||(9393840-9393894)
chr7 (230-297)||(24929689-24929756)
chr7 (247-297)||(35579009-35579058)
chr7 (235-297)||(35579272-35579333)
chr7 (260-297)||(26026704-26026741)
chr7 (260-297)||(48247714-48247751)
[»] chr2 (42 HSPs)
chr2 (135-323)||(7446704-7446892)
chr2 (134-322)||(18450828-18451016)
chr2 (138-322)||(40815347-40815531)
chr2 (135-322)||(22374684-22374871)
chr2 (135-322)||(43058692-43058878)
chr2 (135-322)||(11090879-11091066)
chr2 (133-320)||(40027501-40027688)
chr2 (134-322)||(28616973-28617161)
chr2 (135-322)||(1978468-1978655)
chr2 (137-322)||(239711-239896)
chr2 (136-322)||(3025822-3026006)
chr2 (135-297)||(26538463-26538625)
chr2 (134-297)||(40027138-40027300)
chr2 (130-297)||(22374314-22374480)
chr2 (135-297)||(239352-239512)
chr2 (139-315)||(8425358-8425533)
chr2 (138-322)||(14432500-14432684)
chr2 (139-297)||(11090524-11090681)
chr2 (139-297)||(40815730-40815887)
chr2 (134-297)||(26538095-26538257)
chr2 (139-297)||(14432145-14432302)
chr2 (135-297)||(18451216-18451377)
chr2 (136-297)||(43058333-43058493)
chr2 (135-297)||(1978107-1978268)
chr2 (139-297)||(8425745-8425902)
chr2 (136-297)||(28616613-28616774)
chr2 (135-254)||(28847122-28847241)
chr2 (137-251)||(35781093-35781207)
chr2 (133-262)||(20444746-20444875)
chr2 (142-297)||(3025472-3025625)
chr2 (134-293)||(7446340-7446497)
chr2 (138-249)||(15551501-15551612)
chr2 (138-262)||(8972239-8972363)
chr2 (135-251)||(20440461-20440577)
chr2 (136-262)||(35779708-35779834)
chr2 (138-253)||(15552482-15552596)
chr2 (126-295)||(31797166-31797333)
chr2 (235-297)||(28143416-28143477)
chr2 (126-297)||(6949441-6949612)
chr2 (235-297)||(16953320-16953382)
chr2 (172-297)||(44219680-44219804)
chr2 (260-296)||(38008074-38008110)
[»] chr6 (38 HSPs)
chr6 (135-322)||(12935156-12935343)
chr6 (135-322)||(22219712-22219899)
chr6 (134-322)||(31470313-31470501)
chr6 (135-322)||(11445346-11445533)
chr6 (135-322)||(23075487-23075674)
chr6 (126-297)||(10899928-10900100)
chr6 (133-322)||(20741460-20741652)
chr6 (135-322)||(2319671-2319857)
chr6 (139-322)||(18504922-18505105)
chr6 (136-322)||(18257496-18257682)
chr6 (134-297)||(15828026-15828188)
chr6 (137-316)||(15827639-15827819)
chr6 (136-297)||(10900315-10900475)
chr6 (135-297)||(18257136-18257297)
chr6 (126-299)||(11276580-11276753)
chr6 (136-297)||(11276967-11277127)
chr6 (135-297)||(20741099-20741260)
chr6 (136-297)||(1149816-1149977)
chr6 (136-322)||(4811616-4811801)
chr6 (127-296)||(18505305-18505473)
chr6 (137-297)||(31470701-31470860)
chr6 (135-297)||(12935542-12935703)
chr6 (135-297)||(28472636-28472796)
chr6 (135-297)||(29859825-29859985)
chr6 (135-297)||(11444986-11445147)
chr6 (139-297)||(2322604-2322760)
chr6 (136-297)||(4811372-4811532)
chr6 (134-297)||(23073997-23074148)
chr6 (135-253)||(18296144-18296262)
chr6 (132-279)||(29033430-29033577)
chr6 (135-224)||(1149464-1149553)
chr6 (138-249)||(29035069-29035180)
chr6 (230-299)||(35163570-35163638)
chr6 (134-262)||(3835145-3835273)
chr6 (266-322)||(1149558-1149614)
chr6 (249-315)||(32836114-32836179)
chr6 (230-279)||(22534163-22534211)
chr6 (278-322)||(28472997-28473041)
[»] chr3 (66 HSPs)
chr3 (135-322)||(4275723-4275910)
chr3 (136-322)||(25853234-25853420)
chr3 (136-322)||(37727289-37727475)
chr3 (134-322)||(27393659-27393847)
chr3 (135-322)||(17464490-17464677)
chr3 (132-322)||(20840920-20841110)
chr3 (133-315)||(39555575-39555757)
chr3 (133-322)||(31778650-31778839)
chr3 (135-322)||(5137340-5137527)
chr3 (135-322)||(43973799-43973986)
chr3 (126-322)||(32534949-32535145)
chr3 (135-322)||(29801775-29801962)
chr3 (134-306)||(30098138-30098310)
chr3 (135-322)||(22424813-22425000)
chr3 (132-322)||(24300553-24300742)
chr3 (136-322)||(23644823-23645010)
chr3 (139-314)||(26837363-26837538)
chr3 (128-322)||(26274559-26274753)
chr3 (133-320)||(41047060-41047245)
chr3 (139-297)||(5136983-5137140)
chr3 (135-297)||(20840559-20840720)
chr3 (135-297)||(31779037-31779198)
chr3 (139-297)||(41046703-41046860)
chr3 (136-297)||(39555962-39556122)
chr3 (135-292)||(48452988-48453144)
chr3 (135-297)||(24300941-24301102)
chr3 (132-297)||(23644458-23644622)
chr3 (132-297)||(37726925-37727089)
chr3 (136-253)||(29801356-29801473)
chr3 (136-297)||(43973441-43973601)
chr3 (135-297)||(30104481-30104641)
chr3 (136-297)||(32535344-32535508)
chr3 (138-297)||(25853612-25853770)
chr3 (134-297)||(27393962-27394124)
chr3 (140-286)||(22425209-22425354)
chr3 (135-297)||(26837741-26837901)
chr3 (134-297)||(17464876-17465039)
chr3 (139-262)||(25612396-25612519)
chr3 (135-278)||(51474737-51474880)
chr3 (136-262)||(50116828-50116954)
chr3 (136-262)||(23228427-23228552)
chr3 (160-297)||(26274952-26275087)
chr3 (138-262)||(25420560-25420684)
chr3 (137-253)||(32697128-32697244)
chr3 (135-253)||(37220556-37220674)
chr3 (132-250)||(51473424-51473542)
chr3 (135-247)||(45965937-45966049)
chr3 (135-222)||(37222030-37222117)
chr3 (135-297)||(49407795-49407955)
chr3 (241-297)||(55192222-55192277)
chr3 (229-316)||(8873783-8873869)
chr3 (85-135)||(29631741-29631791)
chr3 (230-297)||(37075782-37075848)
chr3 (235-297)||(27200078-27200139)
chr3 (241-315)||(50900637-50900710)
chr3 (235-312)||(2323477-2323553)
chr3 (137-233)||(25419145-25419242)
chr3 (190-250)||(18010176-18010236)
chr3 (235-297)||(50900914-50900975)
chr3 (260-297)||(32730775-32730812)
chr3 (238-322)||(37076034-37076119)
chr3 (229-297)||(43222775-43222843)
chr3 (229-297)||(47431789-47431857)
chr3 (229-297)||(51473241-51473309)
chr3 (229-297)||(51828343-51828411)
chr3 (241-297)||(55389983-55390039)
[»] chr1 (42 HSPs)
chr1 (127-322)||(17433574-17433769)
chr1 (127-322)||(8678532-8678727)
chr1 (135-322)||(15173453-15173639)
chr1 (134-322)||(39154379-39154567)
chr1 (135-322)||(15646191-15646378)
chr1 (126-322)||(33143905-33144103)
chr1 (135-322)||(50970277-50970464)
chr1 (137-322)||(5539817-5540002)
chr1 (138-322)||(21856044-21856228)
chr1 (136-322)||(29869978-29870164)
chr1 (134-322)||(18984478-18984666)
chr1 (132-322)||(4636330-4636520)
chr1 (136-297)||(29307326-29307487)
chr1 (134-297)||(5962963-5963125)
chr1 (135-297)||(9019347-9019509)
chr1 (136-306)||(26859059-26859229)
chr1 (136-297)||(29306953-29307113)
chr1 (133-297)||(50970663-50970826)
chr1 (137-320)||(5962579-5962762)
chr1 (136-322)||(17112282-17112467)
chr1 (132-297)||(5540203-5540367)
chr1 (134-297)||(15646580-15646742)
chr1 (134-297)||(29869618-29869780)
chr1 (135-297)||(18984118-18984279)
chr1 (139-297)||(15173099-15173256)
chr1 (138-297)||(33144304-33144462)
chr1 (138-297)||(39154021-39154179)
chr1 (136-297)||(8678927-8679086)
chr1 (136-297)||(17433216-17433376)
chr1 (136-297)||(21856428-21856588)
chr1 (135-286)||(9018972-9019122)
chr1 (135-297)||(26859445-26859605)
chr1 (134-262)||(52268288-52268416)
chr1 (138-252)||(52269177-52269291)
chr1 (138-211)||(47826966-47827039)
chr1 (209-297)||(4636045-4636132)
chr1 (144-236)||(47827033-47827125)
chr1 (173-297)||(17088526-17088648)
chr1 (135-222)||(2733416-2733503)
chr1 (230-297)||(17088244-17088310)
chr1 (235-286)||(45048533-45048583)
chr1 (260-297)||(37421285-37421322)
[»] chr5 (52 HSPs)
chr5 (139-322)||(5818932-5819115)
chr5 (135-322)||(8647797-8647984)
chr5 (135-322)||(19359495-19359682)
chr5 (138-320)||(14215243-14215425)
chr5 (138-322)||(2864756-2864940)
chr5 (139-322)||(18182973-18183156)
chr5 (134-322)||(8461290-8461478)
chr5 (134-322)||(29454738-29454926)
chr5 (136-322)||(164191-164376)
chr5 (127-322)||(25000448-25000643)
chr5 (135-322)||(24331558-24331747)
chr5 (136-315)||(15709335-15709513)
chr5 (130-322)||(16018946-16019138)
chr5 (136-293)||(19359136-19359292)
chr5 (126-297)||(2865140-2865310)
chr5 (135-297)||(18183354-18183515)
chr5 (136-297)||(5819314-5819474)
chr5 (136-297)||(8647438-8647598)
chr5 (135-297)||(15708970-15709130)
chr5 (135-297)||(24362221-24362382)
chr5 (134-297)||(29455127-29455289)
chr5 (135-297)||(8460929-8461090)
chr5 (142-322)||(24361843-24362022)
chr5 (138-322)||(15371873-15372060)
chr5 (139-297)||(15372258-15372415)
chr5 (142-322)||(24325218-24325397)
chr5 (135-297)||(164576-164737)
chr5 (135-297)||(14215628-14215789)
chr5 (135-297)||(14463906-14464066)
chr5 (133-253)||(16018586-16018705)
chr5 (136-262)||(7349436-7349562)
chr5 (155-297)||(25000109-25000250)
chr5 (136-253)||(4623148-4623265)
chr5 (137-253)||(4222150-4222266)
chr5 (218-298)||(14462686-14462770)
chr5 (138-297)||(24331945-24332107)
chr5 (136-253)||(4219663-4219780)
chr5 (235-319)||(10721884-10721967)
chr5 (142-262)||(6019189-6019309)
chr5 (136-262)||(7348559-7348685)
chr5 (235-315)||(27307159-27307238)
chr5 (137-264)||(6018315-6018441)
chr5 (128-297)||(41834445-41834613)
chr5 (235-322)||(28494942-28495029)
chr5 (158-262)||(4624644-4624748)
chr5 (235-297)||(28495227-28495288)
chr5 (235-297)||(32305916-32305977)
chr5 (241-297)||(14340793-14340849)
chr5 (241-297)||(27307444-27307499)
chr5 (235-297)||(16752680-16752741)
chr5 (230-304)||(16752948-16753021)
chr5 (172-297)||(19291392-19291517)
[»] scaffold0951 (2 HSPs)
scaffold0951 (135-320)||(2028-2213)
scaffold0951 (135-297)||(1666-1827)
[»] scaffold0417 (2 HSPs)
scaffold0417 (136-315)||(10989-11168)
scaffold0417 (158-297)||(10643-10781)
[»] scaffold0273 (2 HSPs)
scaffold0273 (179-322)||(4246-4389)
scaffold0273 (135-297)||(4592-4753)
[»] scaffold0007 (3 HSPs)
scaffold0007 (133-322)||(64664-64853)
scaffold0007 (134-297)||(64300-64462)
scaffold0007 (235-297)||(205754-205815)
[»] scaffold1223 (2 HSPs)
scaffold1223 (136-297)||(1125-1286)
scaffold1223 (138-297)||(755-912)
[»] scaffold0157 (2 HSPs)
scaffold0157 (158-322)||(16855-17019)
scaffold0157 (205-297)||(16565-16656)
[»] scaffold0295 (2 HSPs)
scaffold0295 (135-297)||(4792-4953)
scaffold0295 (138-316)||(5160-5334)
[»] scaffold0019 (1 HSPs)
scaffold0019 (135-297)||(134058-134219)
[»] scaffold0432 (2 HSPs)
scaffold0432 (139-322)||(9935-10116)
scaffold0432 (139-296)||(10259-10414)
[»] scaffold0027 (2 HSPs)
scaffold0027 (128-297)||(42161-42330)
scaffold0027 (135-297)||(42544-42704)
[»] scaffold0113 (1 HSPs)
scaffold0113 (126-250)||(28674-28798)
[»] scaffold0176 (2 HSPs)
scaffold0176 (133-297)||(18832-18994)
scaffold0176 (136-233)||(19069-19166)
[»] scaffold1585 (1 HSPs)
scaffold1585 (137-261)||(568-692)
[»] scaffold1696 (1 HSPs)
scaffold1696 (140-252)||(454-565)
[»] scaffold0057 (2 HSPs)
scaffold0057 (139-262)||(61877-62000)
scaffold0057 (135-217)||(61027-61109)
[»] scaffold0168 (1 HSPs)
scaffold0168 (191-279)||(7691-7778)
[»] scaffold0076 (1 HSPs)
scaffold0076 (139-239)||(8451-8551)


Alignment Details
Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 45082969 - 45082783
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 132 - 322
Target Start/End: Original strand, 11153142 - 11153332
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||||||||||| ||||||| || |||||||||||| ||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||| ||    
T  11153142 aaaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcattt 11153241  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11153242 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 22434179 - 22434365
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 20471057 - 20470870
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| |||| || ||||||||||| ||||||||||| | |||||||| ||| ||||||||||| |||||    
T  20471057 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttg 20470958  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  20470957 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 131 - 322
Target Start/End: Complemental strand, 12234879 - 12234688
Alignment:
Q  131 taaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagt 230  Q
    |||| |||||||||| ||||||| || |||||||||||| ||||||| |||||| |||||||||||||||| | |||||||| ||||||||||||||| |    
T  12234879 taaatggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 12234780  T
Q  231 tttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||| |||||||||||||||    
T  12234779 tttgttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 15523234 - 15523421
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||| | ||||     
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  15523334 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 25447247 - 25447433
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||  ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 46193405 - 46193591
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||  ||||||||||||||| ||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 18751597 - 18751785
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||| ||||||||||||||| || |||||||||||| |||||| |||||||||||||||||||||||| | |||||||| ||||||||| ||||| ||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| || ||||||||||||    
T  18751697 gttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 133 - 317
Target Start/End: Complemental strand, 48526729 - 48526545
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||| ||||||| ||||||| || |||||||||||  ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||    
T  48526729 aaaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttt 48526630  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccct 317  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  48526629 tgttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 51021341 - 51021155
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| |||||| |||||||| |||||    
T  51021341 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttg 51021243  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||    
T  51021242 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 23494989 - 23494802
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  23494989 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23494890  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||| ||||||| |||||||||| ||||| | ||||||| || ||||||||||||||| |||||||||||||||    
T  23494889 ttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 133 - 322
Target Start/End: Complemental strand, 25938219 - 25938030
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || | |||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||||||||||||||||||| |||    
T  25938219 aaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttt 25938120  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| |||||||||||||||||||||||||| |||| || ||||||| |||||||| ||||||||| ||||||| |||||||    
T  25938119 tgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 4220101 - 4219918
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||| || ||| ||||||||| | |||||||  ||| ||||||||||| |||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 54995072 - 54995255
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||| ||||| ||||||| ||||| ||| | ||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||||| ||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 133 - 322
Target Start/End: Original strand, 2118290 - 2118480
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    |||| |||||||||||||||| || | |||||||||| ||||||| ||| ||||| ||||||||||||| | ||||||| |||||||||||||||| |||    
T  2118290 aaagacttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttt 2118389  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctac-ccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||||||||| |||||| |||||||||    
T  2118390 tgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 322
Target Start/End: Original strand, 12503458 - 12503622
Alignment:
Q  158 tcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcct 257  Q
    |||||||||| ||||||||| |||||| ||  ||| |||||||| | |||||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  12503458 tcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcct 12503557  T
Q  258 attttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  12503558 attttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||| ||||| || |||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    |||||||||||||||| || ||||| |  ||||||||||||||||||||||||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 15523781 - 15523619
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||| |||||||||  ||||||||| ||||| ||||    
T  15523781 aaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattttt 15523682  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  ||||||||||||| |||||||||||||||||    
T  15523681 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 15523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 138 - 297
Target Start/End: Original strand, 33109686 - 33109844
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||| ||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||| ||||||||||||||| ||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 25447782 - 25447621
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  25447782 aggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 25447683  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||  | ||||| |  |||||||||||||||||||| ||||||||||    
T  25447682 ttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagttttag 25447621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 12234328 - 12234488
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || || |||||||||||| |||| ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  12234328 aggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 12234427  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||| |||||||||    
T  12234428 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 11153692 - 11153532
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| |||||||| | ||||||||  |||||||||||||| ||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||  | ||||| |  |||||||||||||||||||| ||||||||||    
T  11153592 tgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagttttag 11153532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 46193954 - 46193790
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    ||||| |||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||||||||||||||| ||    
T  46193954 aaaagacttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 46193855  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    || ||||||||||||||||||| || ||||| |  ||||||||||| |||||| ||||||||||||    
T  46193854 ttattgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagttttag 46193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 25937669 - 25937830
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || ||||||||| || ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  25937669 aggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25937768  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| |||||  | || ||||| |  |||||||||||||||||||||||||||||||    
T  25937769 ttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 25937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 51020796 - 51020957
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || || |||||||||| | |||| ||||||||| ||||||||||||| | ||||||||  |||||||||||||| |||||    
T  51020796 aggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttg 51020895  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  || |||||||| |||||||||||||||||||    
T  51020896 ttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagttttag 51020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 22170485 - 22170322
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||||||||||||||||||| || |||||||||| | |||| || ||| || || |||| |||||||| |||||||||| ||| ||||||||||| ||    
T  22170485 aaaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcattt 22170387  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  22170386 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 22170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 23494440 - 23494603
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    |||| |||||||||| ||||| || |||||||||||| ||||||| ||||| ||| ||||||||||||| | |||||| | ||||||||||||||| |||    
T  23494440 aaagacttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttt 23494539  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    | ||||||||||||||||||| || ||||| |  ||||||| |||||||||||||||||||||||    
T  23494540 tattgcatttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagttttag 23494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 33110010 - 33109883
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || || ||||||||| | ||||| ||| ||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  33110010 aggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 33109911  T
Q  235 ttgcatttttcgtcctacctcctatttt 262  Q
    ||||||||||||||||||||||||||||    
T  33109910 ttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 297
Target Start/End: Complemental strand, 38962362 - 38962204
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||| ||||| || |||||||||||  || |||| |||||||||  |||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||| || ||||| |  || ||||||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttag 38962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 54995609 - 54995453
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||| |||||||||||||||||| |||||||| ||||||||| ||||| |||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||| | || ||||| |  ||| ||||||||| |||||||| ||||||||    
T  54995510 atttttcgtcctaacccccatttt-attctctaaaaacgcaaagaaatgatagttttag 54995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 22434718 - 22434563
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||| ||||| || |||||||||||| ||||||| ||||||||| |||| |||||||  | |||||||| ||| ||||||||||| |||||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaac-agaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  22434619 atttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 22434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 45082435 - 45082590
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    |||||||| |||||| ||||||||||||||  ||||||| || |||||  ||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 45082533  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||| ||||||||||||| ||||||    
T  45082534 atttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatgacaattttag 45082590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 48526195 - 48526355
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| |  |||||||||| | ||||||  |||||||   ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  ||||||||| |||||||||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagttttag 48526355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 297
Target Start/End: Complemental strand, 2118843 - 2118681
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||| ||||||||||||||| || |||||||||||| | ||||  ||||||||| |  |||||||||| | |||||||| ||| ||||||||||| |||    
T  2118843 aaaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttt 2118744  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||| || ||||| |  |||||||||||||||||||| | ||||||||    
T  2118743 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaataatagttttag 2118681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||||||||| |||||||||| | |||||||  ||| ||||| ||||| ||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  238 catttttcgtcct 250  Q
    |||||||||||||    
T  18763963 catttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 253
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgccctttt-aaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||  ||| ||||| |||| |||||||||| ||| ||||||||||| |||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  235 ttgcatttttcgtcctacc 253  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 43243803 - 43243708
Alignment:
Q  158 tcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacc 253  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||| | |||||||  || |||||||||||| ||||||||||||||| ||||||||    
T  43243803 tcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 48293593 - 48293708
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||| || || || |  ||||||| |||||||||  || |||||||||||| |||||    
T  48293593 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttg 48293692  T
Q  235 ttgcatttttcgtcct 250  Q
    ||||||||||| ||||    
T  48293693 ttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  143 ttacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcattt 242  Q
    ||||| ||||| || ||| |||||||||||||||| ||| ||||||| | ||||||||| | |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  243 ttcgtc 248  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 12503912 - 12503821
Alignment:
Q  205 aacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||| |||| || ||||| |  |||||||||||||||||||||||||||||||    
T  12503912 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 20958403 - 20958288
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||  || |||| ||||||| ||||||| ||| ||||| ||||||||||||| | ||||||   ||||||||||||||| |||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  237 gcatttttcgtcctacc 253  Q
    |||||||| ||||||||    
T  20958303 gcattttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 48713888 - 48713777
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||  |  ||||||||| || ||||||  ||| ||||||||| ||||||||| | |||||||  ||||||||||||||| |||||||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  239 atttttcgtcct 250  Q
    ||||||||||||    
T  48713788 atttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 16690933 - 16691062
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||| ||||||||| ||||| || | ||||||||   ||||||| ||| ||||| ||||  ||||||| |||||||||   |||||||||||||| |||    
T  16690933 aaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttt 16691032  T
Q  233 tgttgcatttttcgtcctacctcctatttt 262  Q
    ||||||||||||||||||||| || |||||    
T  16691033 tgttgcatttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 264
Target Start/End: Complemental strand, 10258440 - 10258304
Alignment:
Q  128 aaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatc 227  Q
    ||||| |||||||||||||||||||| || ||||||| |||| ||||||  ||| ||||| ||||||||||||| | |  ||||  ||  ||||||||||    
T  10258440 aaatataaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatc 10258341  T
Q  228 agttttgttgcatttttcgtcctacctcctattttca 264  Q
    | |||||||||| |||| ||| |||| ||||||||||    
T  10258340 atttttgttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 43281313 - 43281210
Alignment:
Q  158 tcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcct 257  Q
    |||||||||||| ||||||| ||| |||||||||| |||||||| | |||||||  || |||||||||| | |||||||||||||||||||||||| ||     
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacccccc 43281215  T
Q  258 atttt 262  Q
    |||||    
T  43281214 atttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 16318323 - 16318256
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaa 201  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||| || |||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaa 16318256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 48295088 - 48294961
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||| ||||| |||||||||||||   ||||||| ||| ||||| ||||  ||||||| | |||||||  ||| ||||||||||| ||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  236 tgcattttt-cgtcctacctcctatttt 262  Q
    ||||||||| ||||||||| || |||||    
T  48294988 tgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 48708294 - 48708401
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| ||   |||||||||| ||  ||| ||| || || ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  48708294 aggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttg 48708393  T
Q  235 ttgcattt 242  Q
    ||||||||    
T  48708394 ttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 44892692 - 44892576
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||| | ||||| || |||||||||| | ||||||| ||| ||||  |||| |||||||| | |||||||| ||| |||||||||   |||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  237 gcatttttcgtcctacc 253  Q
    |||||||||||||||||    
T  44892592 gcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  194 ttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctatttt 262  Q
    |||||||| | |||||||| ||| ||||||||||| |||| |||||||||||||||||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||| | ||||| || |||||||||| | || ||| |||| |||| |||||||||||||||| |||||||  ||| ||||||||||| |||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  236 tgcattttt 244  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 44890512 - 44890643
Alignment:
Q  131 taaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagt 230  Q
    ||||| ||||||||||| ||||| || | |||||||| | || |||| ||| ||||||||||||||||||| | |||||||   ||||| ||||||   |    
T  44890512 taaaatgcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattt 44890611  T
Q  231 tttgttgcatttttcgtcctacctcctatttt 262  Q
    ||||||||||||||| || |||| || |||||    
T  44890612 tttgttgcatttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| ||   |||||||| | ||||||| ||| ||||| ||||  ||||||  | |||||||  |||||| |||||| | ||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaac-ataacaaaattgtcctttaattattatttttgt 16691518  T
Q  236 tgcatttttcgtcctacctcctatttt 262  Q
    ||||||||||||| ||||||| |||||    
T  16691517 tgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 17504072 - 17504133
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 17504436 - 17504345
Alignment:
Q  205 aacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||| |||||| || |||  ||||| ||||| |||| || ||||||||||||||  ||||| | |||||||||||||||||||||||||    
T  17504436 aacaaaaccgtccttaaactatatgtttt-ttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttag 17504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 35193406 - 35193467
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| |||||| ||||||||||||| || || |||||||||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 10795730 - 10795692
Alignment:
Q  278 cagagaaatgacagttttaggcggttttaaacctacccc 316  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacccc 10795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 14439864 - 14439988
Alignment:
Q  172 actcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactcca 271  Q
    |||||| ||| ||||||| || |||| |||| ||||||||  |||| | || |||  ||||| ||||| |||| |||||| ||||   |||| |||||||    
T  14439864 actcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgtttt-ttgcagttttagtcctatctccctatttccaactcca 14439962  T
Q  272 aaaacgcagagaaatgacagttttag 297  Q
     ||||||| |||||||||||||||||    
T  14439963 gaaacgcacagaaatgacagttttag 14439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 34789836 - 34789768
Alignment:
Q  229 gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| | |||||||||||||||    
T  34789836 gtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 34789768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 7e-77; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 125 - 322
Target Start/End: Complemental strand, 13225195 - 13224998
Alignment:
Q  125 caaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatt 224  Q
    ||||||| ||||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| |||||||||||    
T  13225195 caaaaattaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaatt 13225096  T
Q  225 atcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  13225095 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 19176289 - 19176476
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||| ||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  19176289 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176388  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  19176389 ttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 44831245 - 44831433
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || || ||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||||||| ||||||| ||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 44831344  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  44831345 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 41681679 - 41681493
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| || |||| ||||||||| | ||||||||||| | |||||||| ||||||||||||||| ||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 138 - 322
Target Start/End: Complemental strand, 33328683 - 33328499
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||| ||||||| || ||||||||| || ||||||| ||||| ||||||| ||||||||| | |||||||| ||||||||||||||| ||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 9928912 - 9929095
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || ||||||||||   ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 12572393 - 12572210
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||  ||||||| ||||| ||||||| ||||||||| | |||||||| ||||||||||||||| |||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 133 - 322
Target Start/End: Complemental strand, 11657005 - 11656816
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| |||||||||  | |||||||||| | |||||||  ||||||||||||||| |||    
T  11657005 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttt 11656906  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| || || |||||||||||||||    
T  11656905 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 33742921 - 33743107
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||| | ||||||| ||||||||| ||||||||||||| | |||||| | ||| ||||||||||| |||||    
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcatttttg 33743019  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
     ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  33743020 atgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 137 - 322
Target Start/End: Complemental strand, 31133764 - 31133579
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||| || |||||||||||| ||||||| |||||| || ||||||||||||| | |||||||| ||||||||||||| | |||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  237 gcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||| ||||| | |||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 34541094 - 34540934
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||  ||||||||||||||| |||||    
T  34541094 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 34540995  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttt 295  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||    
T  34540994 ttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 41681133 - 41681292
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  41681133 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681232  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    ||||||||||||||||||| || ||||| |  ||||||||||||||||||||||||||||||    
T  41681233 ttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 19176836 - 19176675
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| |||||||  |||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  19176836 aggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176737  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  ||||||||||||||| |||||||||||||||    
T  19176736 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagttttag 19176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 31133219 - 31133380
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||| | ||||||| |||||||||  |||||||||||| |||||||||||||||||||| ||||| |||||    
T  31133219 aggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttg 31133318  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  31133319 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 31133380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 140 - 297
Target Start/End: Original strand, 13224645 - 13224800
Alignment:
Q  140 taattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgca 239  Q
    |||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | ||||||||| |||||||||||||| |||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  240 tttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 13224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 4629796 - 4629952
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    |||||||||| |||||||  |  |||||||||||| || |||| ||||||||| ||||||||||||||| |||||||| ||| ||||||||||| ||||     
T  4629796 aggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttta 4629895  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacag 291  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  4629896 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 297
Target Start/End: Complemental strand, 9930205 - 9930042
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||| ||||||| ||||||| ||||||||| ||||||||||||||| |||||||  ||||||||| ||||| |||    
T  9930205 aaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttt 9930106  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||| || ||||| |  |||||||| ||||||||||||| ||||||||    
T  9930105 tgttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagttttag 9930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 11656454 - 11656616
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| |||||||||||||||||||||||   |||||||| |||||||||||| || |||||    
T  11656454 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttg 11656553  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactcc-aaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||| ||||||||||||||||| |||||||||    
T  11656554 ttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagttttag 11656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 33328156 - 33328318
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||| ||||||||||||||| || |||||||||||| ||||||| |||||| |||||||||||||||| | |||||||| ||||||||| ||||| ||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||  | ||||| |  ||||||||||||| |||||||||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagttttag 33328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 12571862 - 12572024
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||  | ||||||||||| | |||||||| ||| ||||||||||| |||||    
T  12571862 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttg 12571961  T
Q  235 ttgcatttttcgtccta-cctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||| || || ||||| |  |||||||||||||||||||||||||||||||    
T  12571962 ttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 44831791 - 44831630
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||| ||||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||| ||  ||||||||||| |||||    
T  44831791 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttg 44831692  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| |||||||| || ||||| |  |||||||||| ||||||||||||||||||||    
T  44831691 ttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 44831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 9178180 - 9178021
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| |||||| ||||||||| |||||| | |||||||| ||||||||| ||||| ||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| || |||| || ||||| |  ||| |||||||||||||||||||| ||||||    
T  9178080 tgcatttttcatcttacc-cccatttt-attctcaaaaaacgcagagaaatgacaattttag 9178021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 9177726 - 9177818
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||| ||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  9177726 ttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 11337068 - 11336959
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||| |||||  |||||||||||| | || ||||| ||| ||||||||||| |||||    
T  11337068 aggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttg 11336969  T
Q  235 ttgcattttt 244  Q
    ||||||||||    
T  11336968 ttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 33743411 - 33743304
Alignment:
Q  189 tgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatga 288  Q
    |||| |||||||| | |||||||| ||  ||||||||||| |||||||||||||||||||||||| || ||||| |  |||||||||||||||||||| |    
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataa 33743313  T
Q  289 cagttttag 297  Q
    |||||||||    
T  33743312 cagttttag 33743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 4630328 - 4630177
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| ||||||||||||||  ||||||| ||| ||||| |||  |||||||| | || | ||| ||||||||||||      |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||| ||||||| || ||||| |  ||||||||||||||| |||||||||||||||    
T  4630234 atttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagttttag 4630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 8074098 - 8073985
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||| ||| ||||||| || |||||||||||| || |||| ||| || ||||| |||||||||| | |||||||   |||||||||||||| ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-tttt 8074000  T
Q  234 gttgcatttttcgtc 248  Q
    |||||||||| ||||    
T  8073999 gttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  215 tccttcaattatcagttttgttgcatttttcgtcctacctcctatttt 262  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 18805267 - 18805322
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| |||||||||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 9177666 - 9177703
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggctta 172  Q
    ||||||||||||||||||| || |||||||||||||||    
T  9177666 aggcttaattacacttttggtcctcgtgttttggctta 9177703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 3e-73; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 19591071 - 19590884
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| |  |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  19591071 aggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19590972  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19590971 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 133 - 322
Target Start/End: Complemental strand, 19830967 - 19830779
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||||||||| || |||||||||| | |||||||| || |||||||||||| |||    
T  19830967 aaaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttt 19830868  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  19830867 tgttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 2658838 - 2659025
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||  || |||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||  ||||||||||||||| |||||    
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 2658937  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||    
T  2658938 ttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 38859187 - 38859000
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||||||| ||||||| |||||    
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 38859088  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  38859087 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 125 - 322
Target Start/End: Original strand, 32004603 - 32004800
Alignment:
Q  125 caaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatt 224  Q
    ||||||| | ||||||||||||||||||| || |||||||||||| ||||||| ||| || || ||||||||||||| | |||||||  |||||||||||    
T  32004603 caaaaattataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaatt 32004702  T
Q  225 atcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32004703 atcatttttgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 34533790 - 34533977
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||| ||||||||| | || ||||  ||| ||||||||||| |||||    
T  34533790 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttg 34533889  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  34533890 ttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 35288903 - 35289089
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| ||||||||||||| | |||||||  ||||||||||||||| ||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 37787313 - 37787126
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||| ||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||  | |||||||| || |||||||||||| |||||    
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttg 37787214  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  37787213 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 135 - 319
Target Start/End: Original strand, 23952729 - 23952914
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggct-tactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    ||||||||||||||||||| || |||||||||| |  ||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||| |||     
T  23952729 aggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttg 23952828  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctat 319  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  23952829 gttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 4641983 - 4641803
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||||   |||||| || |||||||||| | |||||||| ||||||||||||||| |||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcaca---ctggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    || ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| || |||| |||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 149 - 322
Target Start/End: Original strand, 29099863 - 29100036
Alignment:
Q  149 ttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtc 248  Q
    ||||| || |||||||||||| ||||||| |||||| || ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  249 ctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||| ||| ||||| ||| ||||||||||||||||  |||||| ||||||| |||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 120 - 297
Target Start/End: Original strand, 37786751 - 37786927
Alignment:
Q  120 caacccaaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtcctt 219  Q
    ||||||| |||  ||||||||||||||||||||| || |||||||||||| |||| || ||||||||| ||||||||||||| | |||||||| ||||||    
T  37786751 caacccataaaataaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtcctt 37786850  T
Q  220 caattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  37786851 caattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 19830414 - 19830580
Alignment:
Q  130 ataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcag 229  Q
    |||| ||| ||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| |||||||||||||||     
T  19830414 ataataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat 19830513  T
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  19830514 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 19830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 32005159 - 32004999
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || || ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||  || ||||| |  |||||||||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 32004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 19590525 - 19590685
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| ||||||| || ||||| |  |||||||||| ||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagttttag 19590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 38858640 - 38858803
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||| ||||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||| ||| ||||||||||| |||    
T  38858640 aaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttt 38858739  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||| |||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  38858740 tgttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 38858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 29100400 - 29100236
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||| ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||||||||||||| | |||||||| ||| ||||||||||| ||    
T  29100400 aaaaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29100301  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||| |||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  29100300 ttgttgcattttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 29100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 4641438 - 4641600
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||| ||||||||||||||| || |||||||||||||||||||| ||||||||| ||| ||||| ||| | |||||||| ||| ||||||||||| ||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  ||||||||| |||||||||||| ||||||||    
T  4641538 gttgcatttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagttttag 4641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 35289447 - 35289286
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||| |    
T  35289447 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 35289348  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||| |||| || ||||| |  ||| |||||||||||||||| | ||||||||    
T  35289347 ttgcatttttcgtcataccccccatttt-attctctaaaaacgcagagaaataatagttttag 35289286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 2659386 - 2659225
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || ||| |||||||| || |||  ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  2659386 aggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2659287  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||| ||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  2659286 ttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 2659225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 34534337 - 34534176
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||| ||||||| |  |||||||||||| ||||||| |||||| || ||||| ||||||| | |||||||| ||||||||||||||| |||||    
T  34534337 aggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttg 34534238  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||  ||||||||||||||||||||    
T  34534237 ttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagttttag 34534176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 297
Target Start/End: Complemental strand, 23953268 - 23953114
Alignment:
Q  142 attacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatt 241  Q
    |||||| ||||| || ||||||||||   ||||||| |||||||||  ||||||| |||| | |||||||| ||||||||||||||| ||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  242 tttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||| |||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  23953168 tttcgtcataccccccatttt-attctccaaaaacgcagagaaataacagttttag 23953114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 4478242 - 4478085
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    |||| |||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | || || |  ||||||||||||||| |||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| || | |||  ||| |  |||||||||||||||||||| ||||||||||    
T  4478142 atttttcgtcttatc-cctcattttattctccaaaaacgcagagaaataacagttttag 4478085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 130 - 262
Target Start/End: Original strand, 28583433 - 28583565
Alignment:
Q  130 ataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcag 229  Q
    |||| ||||||||||||||||||| || |||||||||||| ||||||  | | ||||  ||||||||||||| | || ||||| |||||||||||||||     
T  28583433 ataataggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcat 28583532  T
Q  230 ttttgttgcatttttcgtcctacctcctatttt 262  Q
    |||| ||||||||||||||||||| || |||||    
T  28583533 ttttattgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 38160950 - 38161067
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || ||| |||||||| ||||||| ||| |  || ||||||||||||| | |||||||  ||||||||||||| | |||||    
T  38160950 aggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttg 38161049  T
Q  235 ttgcatttttcgtcctac 252  Q
    ||||||||||||||||||    
T  38161050 ttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 4477800 - 4477887
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||  |||||| |||||||||||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 28584466 - 28584341
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||  || ||||| |||||| || |||| ||| |||||||| |||||||||| | |||||||  ||||||||||||||| |||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  237 gcatttttcgtcctacctcctatttt 262  Q
    | |||||||||| |||| || |||||    
T  28584366 gtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 32427461 - 32427406
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaa-ctctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 9393840 - 9393894
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    |||| |||||||||||||||||| ||||||| |||| ||| |||||||||||||||    
T  9393840 ttttagtcctacctcctattttc-aactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 24929756 - 24929689
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  24929756 tttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttag 24929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 35579009 - 35579058
Alignment:
Q  247 tcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||| |||||||||||| ||||| |||||||||||||||||| ||||||    
T  35579009 tcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 35579333 - 35579272
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| ||| |||||||||||||| ||||| |||||||||| ||||| ||||||||||    
T  35579333 ttgcagttttagtcatacctcctattttc-aactctaaaaacgcagggaaataacagttttag 35579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 26026741 - 26026704
Alignment:
Q  260 tttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  26026741 tttccaactccaaaaacgcatagaaatgacagttttag 26026704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 48247714 - 48247751
Alignment:
Q  260 tttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  48247714 tttccaactccaaaaacgcacagaaatgacagttttag 48247751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 135 - 323
Target Start/End: Complemental strand, 7446892 - 7446704
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || |||||||||| ||||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  7446892 aggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 7446793  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgctt 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  7446792 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgctt 7446704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 18450828 - 18451016
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||||  |||||||||||| | |||||||| ||||||||||||||| ||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
     |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 40815347 - 40815531
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| || |||||||||||| ||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 22374871 - 22374684
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374772  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| ||||||||||    
T  22374771 ttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 43058878 - 43058692
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||  ||||||||||||||| |||||    
T  43058878 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttg 43058780  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  43058779 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 11091066 - 11090879
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| | |||    
T  11091066 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattg 11090967  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||||| ||||||    
T  11090966 ttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 133 - 320
Target Start/End: Complemental strand, 40027688 - 40027501
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||| ||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||| ||||||||||| |||    
T  40027688 aaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 40027589  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 320  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| |||||||| ||||    
T  40027588 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 134 - 322
Target Start/End: Complemental strand, 28617161 - 28616973
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||  || |||||||||| | |||||||  ||||||||||||||| ||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  28617061 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 1978655 - 1978468
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || | |||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||||||||||||||||||| |||||    
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 1978556  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||| |||||||||||||||||||||||| | |||| || ||||||| |||||||| ||||||||| ||||||| |||||||    
T  1978555 ttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 137 - 322
Target Start/End: Complemental strand, 239896 - 239711
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||| ||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||  ||||||||||||||| |||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  237 gcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    || ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| | |||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 3026006 - 3025822
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||| ||||  ||||||||||||| ||| |||||| ||||||||||||| | ||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaacaaa-caaaacggtccttcaattattatttttgt 3025909  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||| |||||||| ||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 26538625 - 26538463
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||||| |||||| | |||||||| ||||||||||||||| |||||    
T  26538625 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttg 26538526  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||||||||    
T  26538525 ttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttag 26538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 40027138 - 40027300
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 40027237  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||| ||||||||  | ||||| |  |||||||||||||||||||||||||||||||    
T  40027238 gttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttag 40027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 22374314 - 22374480
Alignment:
Q  130 ataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcag 229  Q
    |||| ||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| |||||||||||||||     
T  22374314 ataataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 22374413  T
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||||| || ||||| |  ||||||||||||| |||||||| ||||||||    
T  22374414 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagttttag 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 239352 - 239512
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||| ||||||||||||||| |||||    
T  239352 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 239450  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  239451 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 239512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 139 - 315
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || | |||||||||| ||||||| ||| ||||| | || |||||||| | |||||||| ||| ||||||||||| || ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 138 - 322
Target Start/End: Complemental strand, 14432684 - 14432500
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||| ||||| || |||||||||||| ||||||  |||||||||||||| |||||||| | || ||||  || |||||||||| | ||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 11090524 - 11090681
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| ||||| ||| ||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 11090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 40815887 - 40815730
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||||| |||||||||||||| | |||||||| | ||||||||||||| |||||||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  40815787 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 40815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 26538095 - 26538257
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||||||  ||||||||||||| | |||||| | ||||||||||||||| ||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 26538194  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  |||||||||| ||||||||| ||||||||||    
T  26538195 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagttttag 26538257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 14432145 - 14432302
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||  ||||||||| ||||||||||||||| |||||||| ||||||||| ||||| |||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||| |||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 14432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 18451377 - 18451216
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| |||| || ||||||||| ||||||||||||| | ||||||| |||||||||| ||||| |||||    
T  18451377 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttg 18451278  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||| ||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  18451277 ttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 43058333 - 43058493
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || ||||||||||||  |||||| ||||||||| |||| |||||||| | |||||||| ||||||||||||||| ||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||| ||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 43058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 1978107 - 1978268
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || | |||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  1978107 aggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 1978206  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| |||||  | || ||||| |  |||||||||||||||||||||||||||||||    
T  1978207 ttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 1978268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 8425902 - 8425745
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| |  | |||||||||  ||||||| ||| ||||| ||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| |||| || ||||| |  |||||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagttttag 8425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 28616613 - 28616774
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||||||||||| || |||||   |  | ||||||||||||||||  |||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttag 28616774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 28847241 - 28847122
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || |||||||||||  ||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||    
T  28847241 aggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttg 28847142  T
Q  235 ttgcatttttcgtcctacct 254  Q
    ||||||||||||||||||||    
T  28847141 ttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||| || |||||||||||| ||||||| ||| ||||||||||||||||||| | ||||||||  |||||||||||||| |||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  237 gcatttttcgtccta 251  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 20444746 - 20444875
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || ||||||||||||  |||||| ||||||||| ||||||||||||| | |||||||| |||||||| |||||| |||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 20444845  T
Q  233 tgttgcatttttcgtcctacctcctatttt 262  Q
    ||||||| ||||||||||||| || |||||    
T  20444846 tgttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 297
Target Start/End: Original strand, 3025472 - 3025625
Alignment:
Q  142 attacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatt 241  Q
    |||||| ||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||| ||||||||| ||||| ||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  242 tttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||| || ||||| |  ||| ||||||||| |||||||||||||||||    
T  3025572 tttcgtcctacc-cccatttt-attctcaaaaaacgcaaagaaatgacagttttag 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 293
Target Start/End: Original strand, 7446340 - 7446497
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||  ||||||  ||| ||||| ||||||||||||| | |||||||| ||| ||||||||||| ||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtt 293  Q
     |||||||||||||| |||| || ||||| |  |||||||||||||||||||||||||||    
T  7446440 attgcatttttcgtcatacc-cccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || ||||||||||| |||||||| ||| |||||||||| |||||||| |||||||||  |||||||| |||||| ||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  238 catttttcgtcc 249  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 262
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||| | ||||| ||| |||||||||||||| |||| | |||||||  ||| ||||||||||| ||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  238 catttttcgtcctacctcctatttt 262  Q
    |||||||||| ||||| ||||||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 20440577 - 20440461
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || ||||||||||||  |||||| ||||||||| ||||||||||||| | |||||||| ||| |||| |||||| |||||    
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttg 20440478  T
Q  235 ttgcatttttcgtccta 251  Q
    ||||| |||||||||||    
T  20440477 ttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 35779708 - 35779834
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||| | ||||||| ||| ||||| |||| |||||||| | |||||||  ||||||||||||||| ||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  236 tgcatttttcgtcctacctcctatttt 262  Q
    ||||||||| |||||||| || |||||    
T  35779808 tgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 253
Target Start/End: Complemental strand, 15552596 - 15552482
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| ||||  ||||||||| ||||||| ||| || ||  |||||||||||| | |||||||  ||| ||||||||||| ||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  238 catttttcgtcctacc 253  Q
     |||||||||||||||    
T  15552497 tatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 295
Target Start/End: Complemental strand, 31797333 - 31797166
Alignment:
Q  126 aaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatta 225  Q
    ||||| |||||||||||||||||||||| || ||   ||||| |   ||||| ||| ||||||||||  ||| ||||  |||||||| |||| | || ||    
T  31797333 aaaaaaaaaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaacta 31797234  T
Q  226 tcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttt 295  Q
    |  ||||| ||||| |||| |||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  31797233 tatgtttt-ttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 28143477 - 28143416
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  28143477 ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 297
Target Start/End: Original strand, 6949441 - 6949612
Alignment:
Q  126 aaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatta 225  Q
    |||||||||||||||||||||| ||||| || |    ||||| || |||||| ||| ||||| |  | |||| ||||  |||||||  |||||| || ||    
T  6949441 aaaaataaaaggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaacta 6949540  T
Q  226 tcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |  ||||| ||||| |||| |||||| ||||   |||| ||||||| ||||||| |||||||||||||||||    
T  6949541 tatgtttttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttag 6949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 16953382 - 16953320
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  16953382 ttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttag 16953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 44219680 - 44219804
Alignment:
Q  172 actcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactcca 271  Q
    |||||||||| || || | || |||| ||||  |||||||  |||||| ||||||  ||||| ||||| |||| |||||| ||||   |||| |||||||    
T  44219680 actcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgtttt-ttgcagttttagtcctatctccctgtttccaactcca 44219778  T
Q  272 aaaacgcagagaaatgacagttttag 297  Q
     ||||||| |||||||||||||||||    
T  44219779 gaaacgcacagaaatgacagttttag 44219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 38008074 - 38008110
Alignment:
Q  260 tttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  38008074 tttccaactccaaaaacgcacagaaatgacagtttta 38008110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 6e-71; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 12935156 - 12935343
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  12935156 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12935255  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  12935256 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 22219899 - 22219712
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  22219899 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22219800  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  22219799 ttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 31470313 - 31470501
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||| ||||||||| | |||||||||||| ||||||||| | ||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattattttt 31470412  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  31470413 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 11445533 - 11445346
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||| ||||||||||||||| |||||    
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 11445434  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  11445433 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 23075674 - 23075487
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  23075674 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23075575  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||    
T  23075574 ttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 297
Target Start/End: Original strand, 10899928 - 10900100
Alignment:
Q  126 aaaaataaaaggctt-aattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatt 224  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| |||||||||||    
T  10899928 aaaaaaaaaaggctttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 10900027  T
Q  225 atcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10900028 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 10900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 133 - 322
Target Start/End: Complemental strand, 20741652 - 20741460
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||| ||| || |||||||||||| ||||||| |||||| || ||||||||||||| | |||||||| ||||||||||||||| |||    
T  20741652 aaaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 20741553  T
Q  233 tgtt---gcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | ||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20741552 tttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 2319671 - 2319857
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || |||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  2319671 aggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2319770  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  2319771 ttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 18504922 - 18505105
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||| || |||||||||||| ||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||| ||||| |||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 18257682 - 18257496
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||| ||||||| || |||||||||| | ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||| | ||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | |||||||||||||||||| ||||||| ||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 15828188 - 15828026
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  15828088 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 15828026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 137 - 316
Target Start/End: Original strand, 15827639 - 15827819
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaa--acagtccttcaattatcagttttg 234  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||  || |||||||||| | ||||||  || ||||||||| ||||| |||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccc 316  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| || ||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacccc 15827819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 10900475 - 10900315
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||| ||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 10900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 18257136 - 18257297
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  18257136 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18257235  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||| |||| || ||||| |  |||||||||||||||||||||||||||||||    
T  18257236 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 11276580 - 11276753
Alignment:
Q  126 aaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatta 225  Q
    ||||||||||||||||||||||| |||  ||  ||||||||||  ||||||  |||||| || | ||||||||||| | |||||||  |||||||||||     
T  11276580 aaaaataaaaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattg 11276679  T
Q  226 tcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggc 299  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11276680 tcatttttgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggc 11276753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 11277127 - 11276967
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||||| | |||||||| || |||||||||||| ||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagttttag 11276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 20741099 - 20741260
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||  ||||||||| ||||| |||||    
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttg 20741198  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  20741199 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 20741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 1149977 - 1149816
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || ||||||||| || ||||||  ||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  236 tgcatttttcgtcctacctcctattttcaaactcc-aaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  |||| |||||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagttttag 1149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 4811801 - 4811616
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||| ||||||| || |||||||||||| ||||||  |||||| ||||||  |||||||| | |||||||| ||||||||||||||| ||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||| || |||||||||||||||||| ||| ||||||||| ||||| || |||||||  |||||| |||||||||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 127 - 296
Target Start/End: Complemental strand, 18505473 - 18505305
Alignment:
Q  127 aaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattat 226  Q
    |||| |||| ||||||||| ||||||| || |||||||||||  ||||||| |||||| || ||||||||||||| | ||||||||||||||||||||||    
T  18505473 aaaaaaaaaagcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattat 18505374  T
Q  227 cagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    || |||||||||||||||||||||||| || ||||| |  |||||| |||| ||||||||||||||||||    
T  18505373 catttttgttgcatttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 297
Target Start/End: Complemental strand, 31470860 - 31470701
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||| || | ||||||| || ||||||| ||||||||  ||||||||||||| | |||||||| ||||||||||||||| |||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  237 gcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||| || ||||| |  |||||||||||||||||||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaattttag 31470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 12935703 - 12935542
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| || ||||| | |||||||| ||||||||||||||| |||||    
T  12935703 aggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttg 12935604  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    || |||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  12935603 ttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagttttag 12935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 28472636 - 28472796
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || ||||||||||||  |||||| ||| ||||| |||| |||||||| | |||||||  ||| ||||||||||| |||||    
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 28472735  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  28472736 ttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 28472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 29859825 - 29859985
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || ||||||||||||  |||||| ||| ||||| |||| |||||||| | |||||||  ||| ||||||||||| |||||    
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 29859924  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  29859925 ttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 29859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 11444986 - 11445147
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| || |||||| ||||| ||||||| | || ||||  ||||||||||||||| |||||    
T  11444986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttg 11445085  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||  | ||||| |  ||| |||||| ||||||||||||||||||||    
T  11445086 ttgcatttttcgtcctaccctccatttt-attctctaaaaacacagagaaatgacagttttag 11445147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 2322760 - 2322604
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||  ||||||| ||||| ||| |||| |||||||| | |||||||| ||||||||||||||| |||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| |||  ||| |  |||| ||||| ||||||||||||||||||||    
T  2322660 atttttcgtcctacc-cctcattttattctcc-aaaacacagagaaatgacagttttag 2322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 4811372 - 4811532
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| ||   || ||||||  ||||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    | ||||||||||| |||| || ||||| |  || |||||||||||| |||| ||||||||||    
T  4811472 ttcatttttcgtcttaccccccatttt-attcttcaaaaacgcagataaataacagttttag 4811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 23073997 - 23074148
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||           
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat------- 23074089  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
        |||||||||||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  23074090 ----catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 23074148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 18296144 - 18296262
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||| | ||||  || |||||||||| ||||||||||||| || |  ||||||||||||| | |||||||| |||||||| |||||| |||||    
T  18296144 aggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttg 18296243  T
Q  235 ttgcatttttcgtcctacc 253  Q
    |||||||||||||||||||    
T  18296244 ttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 279
Target Start/End: Original strand, 29033430 - 29033577
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    ||||| |||||||||||||||| || |||| ||||||| | ||||| ||| ||||| ||||||||||||| | |||||||| |||||||| |||||| ||    
T  29033430 aaaagacttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcattt 29033529  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgca 279  Q
    ||||||||  |||| ||||||| || |||||    |||||||||||||    
T  29033530 ttgttgcacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 1149464 - 1149553
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatt 224  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||  |||||||||||    
T  1149464 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 138 - 249
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||  || ||||||||| || ||||||| ||| |||| |||||||||||||| | |||||||  |||||| | |||||| ||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  238 catttttcgtcc 249  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 35163638 - 35163570
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggc 299  Q
    |||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  35163638 tttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacacagagaaatgacagttttaggc 35163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 3835273 - 3835145
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||| ||||||||||||||| ||   |||||||| | ||||||| ||| ||||| ||||  ||||||| | |||||||  |||||| |||||||| ||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattttt 3835174  T
Q  234 gttgcatttttcgtcctacctcctatttt 262  Q
    || ||||||||||||||||| || |||||    
T  3835173 gtggcatttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  266 actccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||| |||| |||||||||  |||||||||||| ||||| |||||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 32836114 - 32836179
Alignment:
Q  249 ctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    ||||||||||||||||| ||||  |||| |||||||||||||||||||| |  ||||| ||||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 22534163 - 22534211
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgca 279  Q
    |||| ||||| |||| |||||||||||||||||| |||||||||||||||    
T  22534163 tttttttgcagttttagtcctacctcctattttc-aactccaaaaacgca 22534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 28473041 - 28472997
Alignment:
Q  278 cagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||| |||||||||||||||| ||||||| |||||||| ||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacccatatgct 28472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 6e-71; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 4275910 - 4275723
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||| ||||||||| | |||||||| |||||| |||||||| |||||    
T  4275910 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttg 4275811  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4275810 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 25853234 - 25853420
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 37727475 - 37727289
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || || ||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||| ||||||||||||||| ||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 27393659 - 27393847
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||| | ||||||||||||||||| |||| |||||||| | |||||||| ||||||||||||||| ||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattttt 27393758  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  27393759 gttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 17464490 - 17464677
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| || || | ||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  17464490 aggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 17464589  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||| |||||||||||||||    
T  17464590 ttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 132 - 322
Target Start/End: Complemental strand, 20841110 - 20840920
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||||||||||||||||||| |  |||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||| ||||||||||||||| ||    
T  20841110 aaaaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 20841011  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |  ||||||||||||    
T  20841010 ttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 133 - 315
Target Start/End: Original strand, 39555575 - 39555757
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||  ||||||||||||||| |||    
T  39555575 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttt 39555674  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39555675 tgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 133 - 322
Target Start/End: Original strand, 31778650 - 31778839
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||||||||||  ||||||  ||||||||| ||||||||||||| | |||||||| |||||||  |||||| |||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttt 31778749  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  31778750 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 5137527 - 5137340
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||  ||||||||  ||||||||||||||| |||||||  ||||||||||||||| |||||    
T  5137527 aggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 5137428  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  5137427 ttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 43973986 - 43973799
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||  ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  43973986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 43973887  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  43973886 ttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 126 - 322
Target Start/End: Original strand, 32534949 - 32535145
Alignment:
Q  126 aaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatta 225  Q
    ||||| |||||| ||||||||||||||| || |||||||||||| ||||||| ||| ||||| |||| |||||||| | |||||||| ||||||||||||    
T  32534949 aaaaaaaaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaatta 32535048  T
Q  226 tcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||| |||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  32535049 tcatttttgttgcatttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 29801962 - 29801775
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||| ||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  29801962 aggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29801863  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||| |||||||    
T  29801862 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 30098310 - 30098138
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||| | ||||||| ||||||||| ||||||||||||| | |||||||  ||||||||||||||| ||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattttt 30098211  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggtttta 306  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  30098210 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggtttta 30098138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 22424813 - 22425000
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| |  ||||||||  || |||| || ||||||||  || |||||||||| | |||||||| ||||||||||||||| |||||    
T  22424813 aggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 22424912  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  22424913 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 132 - 322
Target Start/End: Original strand, 24300553 - 24300742
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||| ||||||||| ||||| || ||||||||||||||| |||| ||||||||| || |||||||||| | || ||||| || |||||||||||| ||    
T  24300553 aaaaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcattt 24300651  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  24300652 ttgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 23645010 - 23644823
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||| ||||||| || |||||||||||| ||||||| ||| ||||| | ||||||||||| | |||||||| ||| ||||||||||| ||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacct-acccctatgct 322  Q
    |||||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 139 - 314
Target Start/End: Original strand, 26837363 - 26837538
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||| || | ||| |||| ||||||||||||||| |||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacc 314  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 128 - 322
Target Start/End: Original strand, 26274559 - 26274753
Alignment:
Q  128 aaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatc 227  Q
    |||||||||| ||||||||| ||||| || | || ||||||  ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||    
T  26274559 aaataaaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc 26274658  T
Q  228 agttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | ||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||| |||||| ||||||  |||||||    
T  26274659 atttttgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 133 - 320
Target Start/End: Complemental strand, 41047245 - 41047060
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||| ||||||||||||| || | || ||||||||| ||||||| ||||||||  || |||||||||| | || ||||| ||||||||||||||| |||    
T  41047245 aaaggtttaattacactttcgt-cttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttt 41047148  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  41047147 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 5136983 - 5137140
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || ||||||||||||  |||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 20840559 - 20840720
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| |||||||||| |||||||| ||||||||||||||| |||||    
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttg 20840658  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  ||||  |||||||||||||||||||||||||    
T  20840659 ttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagttttag 20840720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 31779198 - 31779037
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  31779198 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 31779099  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| ||| || ||||| |  ||||||||||||||||||||| |||||||||    
T  31779098 ttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagttttag 31779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 41046703 - 41046860
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| || | || ||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 41046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 39556122 - 39555962
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||  ||||||||||||||| ||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 39555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 135 - 292
Target Start/End: Original strand, 48452988 - 48453144
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    |||||| |||||||||||| ||||||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||| ||||||||||||||| |||||    
T  48452988 aggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 48453087  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagt 292  Q
    ||||||||||||||||||| || ||||| |  ||||||||||||||||||||||||||    
T  48453088 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 24301102 - 24300941
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||| ||||| |||| |||||||| |||||||||| ||||||| | ||||| |||||    
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttg 24301003  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  24301002 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 297
Target Start/End: Original strand, 23644458 - 23644622
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||||||||||||||||||| || |||| ||||||| ||||||| ||| ||||| |||| |||||||| | |||||||||||||||||||||||| ||    
T  23644458 aaaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcattt 23644557  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||||||||||| | ||||||||    
T  23644558 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 23644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 297
Target Start/End: Original strand, 37726925 - 37727089
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||||||||||||||||||| || |||||||||||  | || || ||||||||  ||||||||||||| | |||||||| ||||||||||||||| ||    
T  37726925 aaaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattt 37727024  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  37727025 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37727089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 253
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||| ||||||||| ||||| ||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  236 tgcatttttcgtcctacc 253  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 43973441 - 43973601
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||| | ||||||| ||| || | |||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  ||||||||||||||| |||| ||||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagttttag 43973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 30104481 - 30104641
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||| | ||||||| ||| ||||| ||||||||||||| |||| | ||| ||||||||||||||| |||||    
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttg 30104580  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |   || |||||||||||||||||||||||||||    
T  30104581 ttgcatttttcgtcctacc-cccatttt-attatctaaaaacgcagagaaatgacagttttag 30104641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 32535508 - 32535344
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatc-----agt 230  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||     | |    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  231 tttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||||| || ||||| |  |||||||||||||||||||||| ||||||||    
T  32535408 tttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgatagttttag 32535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 297
Target Start/End: Complemental strand, 25853770 - 25853612
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || ||||||||||   ||||||| ||||||||| || | |||||||| | |||||||  ||||||||||||||| ||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 25853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 27394124 - 27393962
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||  |||| |||| |||||||| | ||||||||  |||||||||||||| ||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattttt 27394025  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| | ||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  27394024 gttgcattttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagttttag 27393962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 140 - 286
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  140 taattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgca 239  Q
    |||||||||||||| || |||||||| ||| ||||||| || |||||||||||||| ||||| | |||||||| || |||||||||||| ||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  240 tttttcgtcctacctcctattttcaaactccaaaaacgcagagaaat 286  Q
    |||||||||||||| || ||||| |  ||||||||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 26837901 - 26837741
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| |||| || ||||||||  |||||||| |||||| |||||||| ||| ||||| ||||| |||||    
T  26837901 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttg 26837803  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| |||||||| || ||||| |  ||||||||| |||||||||||||||||||||    
T  26837802 ttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 26837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 17465039 - 17464876
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||| ||||| || |||||||||||| ||| ||  |||||||||   ||||||||||||| |||||||| ||||||||||||||| ||||    
T  17465039 aaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcattttt 17464940  T
Q  234 gttgcat-ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||| |||| |||||||| || ||||| |  ||||||||| |||||||||||||||||||||    
T  17464939 gttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 17464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 25612519 - 25612396
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||| | ||||||| ||| ||||| ||||||||||||||| |||||||| ||| || |||||||| |||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  239 atttttcgtcctacctcctatttt 262  Q
    ||||||||||||||| || |||||    
T  25612419 atttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 51474880 - 51474737
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| |   ||||||||||| ||||||| ||| ||||||||||||||||||| | |||||||  |||||| | |||||| |||||    
T  51474880 aggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttg 51474781  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgc 278  Q
    ||||||||||||||||||| || ||||| |  ||||||||||||    
T  51474780 ttgcatttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 50116954 - 50116828
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||| ||| |||| |||||| ||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  236 tgcatttttcgtcctacctcctatttt 262  Q
    |||| ||||||||||||| || |||||    
T  50116854 tgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| ||  ||||||||||| ||||||| ||| || ||||||||||||||||  || |||||  ||||||||||||||| |||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaacgaa-caaaattgtccttcaattatcatttttat 23228454  T
Q  236 tgcatttttcgtcctacctcctatttt 262  Q
    ||||||||||||||||||||| |||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 297
Target Start/End: Complemental strand, 26275087 - 26274952
Alignment:
Q  160 gtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctat 259  Q
    |||||||| | ||||||| ||||||||| | ||||||||||| | || ||||| |||| |||||||||| ||||||||| |||||||||||||| || ||    
T  26275087 gtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 26274989  T
Q  260 tttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||| |  |||||||| ||||||||||||||||||||||    
T  26274988 ttt-attctccaaaaccgcagagaaatgacagttttag 26274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 25420684 - 25420560
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| ||||||| ||||| | ||||||| ||| || ||| |||||||||||||| || ||||  ||||||||||||| | ||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  238 catttttcgtcctacctcctatttt 262  Q
    ||||||||||| |||| || |||||    
T  25420584 catttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 32697244 - 32697128
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||| | ||||| || ||||||||| || ||||||| ||| | |||| |||||||||||| | |||||||  || |||||||||||| |||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  237 gcatttttcgtcctacc 253  Q
    |||||||||||||||||    
T  32697144 gcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 37220556 - 37220674
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||| ||||||| ||||||||| |  | |||||| ||||||||| | || ||||  |||||||| |||||| |||||    
T  37220556 aggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttg 37220655  T
Q  235 ttgcatttttcgtcctacc 253  Q
    ||||| |||||||||||||    
T  37220656 ttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 51473424 - 51473542
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||| ||||||||||||||||| || |||||||||||  || |||| ||| ||||| ||||||||||||| | |||||||  |||||||  |||||| ||    
T  51473424 aaaatgcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcattt 51473523  T
Q  232 ttgttgcatttttcgtcct 250  Q
    |||||||| |||| |||||    
T  51473524 ttgttgcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 45965937 - 45966049
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||  |  || ||| ||||||||| | |||||||  ||||||| ||||||| || ||    
T  45965937 aggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtg 45966036  T
Q  235 ttgcatttttcgt 247  Q
    |||||||||||||    
T  45966037 ttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 37222117 - 37222030
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaa 222  Q
    ||||||||||||||||||| || |||||||||| | ||||||||||| ||||| |||| |||||||| | ||||||||  ||||||||    
T  37222117 aggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 49407795 - 49407955
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||  ||||| |   ||||| ||| ||||||||||  ||| ||||| |||||||| |||| | || | |  ||||||    
T  49407795 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttg 49407894  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |  || |||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  49407895 ta-cagttttagtcatacctcctattttcaa-ctccaaaaacgcagagaaatgacaattttag 49407955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 55192222 - 55192277
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 8873783 - 8873869
Alignment:
Q  229 gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccc 316  Q
    ||||| ||||| |||| ||| |||||||||||||||| || || |||||||||||||||||||||||||||  ||||  |||||||||    
T  8873783 gtttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacccc 8873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 29631791 - 29631741
Alignment:
Q  85 cggtcatgctaacttgtgtcctaagggatgttaagcaacccaaaaataaaa 135  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29631791 cggttatgctaacttgtgtcctaaggaatgttaaacaacccaaaaataaaa 29631741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 37075782 - 37075848
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||| |||| |||||||||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  37075782 tttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 27200139 - 27200078
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| ||| |||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  27200139 ttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 50900637 - 50900710
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    |||| ||||||||| |||||||||| ||| | ||||  ||||||||||||||||||||| |||||| ||||||||    
T  50900637 ttttagtcctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 2323477 - 2323553
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaaccta 312  Q
    ||||| |||| |||||||||||||||||| ||||||| |||| | || |||||||||||||||||  ||||| |||||    
T  2323477 ttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtcc-ttcaattatcagtttt 233  Q
    |||| |||| ||||||| || ||||||||| |||||||||| ||| | ||  ||||||||||||| | |||||||| |||| ||||||||||| ||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 18010236 - 18010176
Alignment:
Q  190 gcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcct 250  Q
    |||||||||||| | |||||||  ||  ||||||||||| |||||||||||||||||||||    
T  18010236 gcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 50900975 - 50900914
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| |||||||||||||||||| ||||||| ||||||| ||||||  |||||||||    
T  50900975 ttgcagtttttgtcctacctcctattttc-aactccataaacgcaaagaaattgcagttttag 50900914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 32730812 - 32730775
Alignment:
Q  260 tttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  32730812 tttcaaactccagaaacgcacagaaatgacagttttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 37076119 - 37076034
Alignment:
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaaccta-cccctatgct 322  Q
    ||||||| ||| ||||| |||||||  ||||| | ||||| ||||||||| ||||||||||| |||||| || || ||||||||||    
T  37076119 catttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagacttatcccctatgct 37076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 43222843 - 43222775
Alignment:
Q  229 gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| ||||| |||| |||| ||| ||||||||  ||||||| ||||||| | |||||||||||||||    
T  43222843 gtttttttgcagttttagtcccaccccctatttttcaactccagaaacgcacaaaaatgacagttttag 43222775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 47431789 - 47431857
Alignment:
Q  229 gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||| ||||||| |||||||||||||||||    
T  47431789 gtttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 47431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 51473309 - 51473241
Alignment:
Q  229 gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| | |||||||||||||||    
T  51473309 gtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 51473241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 51828411 - 51828343
Alignment:
Q  229 gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||| ||||||| |||||||||||||||||    
T  51828411 gtttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 51828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 55390039 - 55389983
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| |||||||||||   |||| ||||||| ||||||| |||||||||||||||||    
T  55390039 ttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttag 55389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 6e-71; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 127 - 322
Target Start/End: Complemental strand, 17433769 - 17433574
Alignment:
Q  127 aaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattat 226  Q
    ||||||| || |||||||||||||||| || ||||||| |||| ||||||| ||||||||||||||||||||||| | |||||||| |||||||||||||    
T  17433769 aaaataatagacttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattat 17433670  T
Q  227 cagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    || ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  17433669 catttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 127 - 322
Target Start/End: Original strand, 8678532 - 8678727
Alignment:
Q  127 aaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattat 226  Q
    ||||||| | ||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  8678532 aaaataatatgcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattat 8678631  T
Q  227 cagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    || ||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  8678632 catttttgttgcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 15173639 - 15173453
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||||| |||| |||||||| | |||||||  ||||||||||||||| |||||    
T  15173639 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttg 15173541  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15173540 ttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 134 - 322
Target Start/End: Complemental strand, 39154567 - 39154379
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||| | |||||||  ||||||||||||||| ||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  39154467 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 15646191 - 15646378
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||| ||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| | |||||||  || |||||||||||| |||||    
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttg 15646290  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  15646291 ttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 15646378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 126 - 322
Target Start/End: Original strand, 33143905 - 33144103
Alignment:
Q  126 aaaaataaaaggcttaatta--cacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaat 223  Q
    ||||| ||||||||||||||  |||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||    
T  33143905 aaaaaaaaaaggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaat 33144004  T
Q  224 tatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33144005 tatcattttttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 50970277 - 50970464
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||||  | |||||||| ||||||||||||||| |||||    
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttg 50970376  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  50970377 ttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 137 - 322
Target Start/End: Original strand, 5539817 - 5540002
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||| || |||||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||||||||||||||| |||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  237 gcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 21856044 - 21856228
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || ||||||||||   ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21856144 catttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 29870164 - 29869978
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||  ||||||||| |||| |||||||| | |||||||| ||||||||||||||| ||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 134 - 322
Target Start/End: Complemental strand, 18984666 - 18984478
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || | |||||||||| ||||||| ||| ||||| ||||||||||||| | |||||||| ||||||||||||||| ||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984567  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18984566 gttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 322
Target Start/End: Complemental strand, 4636520 - 4636330
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||| ||||||||||||||||| || |||||||||||| ||||||| |||||| || ||||||||||||| | ||||||||  |||||||||||||| ||    
T  4636520 aaaatgcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcattt 4636421  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||| |||||||||||||||    
T  4636420 ttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 29307487 - 29307326
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    ||||||||| |||||||| || |||||||||| | ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 5963125 - 5962963
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||| ||||||||||||||| || |||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcattttt 5963026  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  5963025 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 9019509 - 9019347
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||| | ||||||||||||||||  |||| |||||||| | |||||||| ||| ||||||||||| |||||    
T  9019509 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 9019410  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  9019409 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttag 9019347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 136 - 306
Target Start/End: Original strand, 26859059 - 26859229
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || | |||||||||| |||| || ||||||||| |||| |||||||| | |||||||| ||||||||||||||| ||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggtttta 306  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| | | |||||||||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggtttta 26859229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 29306953 - 29307113
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| |||||||||||| |||||||||| | |||||||| ||||||||||||||| ||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 29307113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 133 - 297
Target Start/End: Complemental strand, 50970826 - 50970663
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||||||||||| |||| || ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||    
T  50970826 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 50970727  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  50970726 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 50970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 137 - 320
Target Start/End: Original strand, 5962579 - 5962762
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||| ||||| || ||||||| |||  || |||| |||||||||  |||||||||||| | |||||||| ||| ||||| ||||| |||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  237 gcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 320  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 17112282 - 17112467
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| |  || |||||||   ||||||  ||| |||| | |||||||||||||| || |||| |||||||||||||||| |||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggt-aggcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 5540367 - 5540203
Alignment:
Q  132 aaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtt 231  Q
    |||||||||||||||||||||| || |||||||||||| ||||||| ||||||||| || |||||||||| | || ||||| ||||||||||||||| ||    
T  5540367 aaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcattt 5540268  T
Q  232 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  5540267 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 15646742 - 15646580
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||| || | ||||||||||| | |||||||| ||||||||||||||| ||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 15646643  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  15646642 gttgcatttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagttttag 15646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 29869618 - 29869780
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||| | ||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattttt 29869717  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||  || ||||| |  |||||||||||||||||||||||||||||||    
T  29869718 gttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagttttag 29869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 18984118 - 18984279
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||  ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  18984118 aggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984217  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||| ||||||||    
T  18984218 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagttttag 18984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 15173099 - 15173256
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| ||||| ||| ||||||||||||||  |||||||| || |||||||||||| |||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 15173256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 138 - 297
Target Start/End: Complemental strand, 33144462 - 33144304
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||  | ||||||| ||||| ||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 138 - 297
Target Start/End: Original strand, 39154021 - 39154179
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| ||||| ||||||||| ||||||| |||||| |||||||||||||||| | |||||||| ||||| ||||||||| ||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||| || ||| | |  ||||||||||||| |||||||||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagttttag 39154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 8679086 - 8678927
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| |||||||  |||||||| ||||||||||||| | |||||||  ||| ||||||||||| ||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||||| ||||| |  ||||||||| |||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagttttag 8678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 17433216 - 17433376
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || || ||||||||| ||||||  ||||||  ||||||||||||||| | |||||||| ||||||||| ||||| ||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| ||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 17433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 21856588 - 21856428
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||  |||||| || |||| |||||||| | |||||||| ||||||||| ||||| |||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||  || ||||| |  |||||||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 21856428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 286
Target Start/End: Original strand, 9018972 - 9019122
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| |||| || ||||||||  ||||||||||||| | |||||||| ||| ||||| ||||| |||||    
T  9018972 aggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttg 9019071  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaat 286  Q
    ||||||||||||||||||| || ||||| |  ||||||||||||||||||||    
T  9019072 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 26859605 - 26859445
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||  ||||||| |||||  || ||||||||||||| | ||||| || ||||||||||||||| |||||    
T  26859605 aggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttg 26859506  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||  |  |||||||||||||||||||| | ||||||||    
T  26859505 ttgcatttttcgtcctaccccccattt--attctccaaaaacgcagagaaataatagttttag 26859445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 52268288 - 52268416
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||| ||||||| | ||||| ||| ||||| ||||||||||||| | |||||||| ||| |||| |||||| ||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcattttt 52268387  T
Q  234 gttgcatttttcgtcctacctcctatttt 262  Q
    |||||| ||||||||||||| || |||||    
T  52268388 gttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 138 - 252
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||| ||||||||  |||  |||  ||||||||||||| | |||||||  ||| |||| |||||| ||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  238 catttttcgtcctac 252  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaa 211  Q
    |||||||||||||||| || |||||||||||  ||||||| ||| ||||||||||||||||||||| |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 4636045 - 4636132
Alignment:
Q  209 aaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||||||| ||||| ||||||||||||||| || ||||| || ||||| |  || ||||||||||||||||||||||||||||    
T  4636045 aaacggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttag 4636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  144 tacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    |||||||||| ||  | ||||||||| ||||||| ||| ||||||||||||||||||| | |||||||  |||||| |||||||| |||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 17088648 - 17088526
Alignment:
Q  173 ctcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaa 272  Q
    ||||| ||| ||||||||||  ||| |||| ||||||||| |||| | || |||   |||| ||||| |||| || |||||||||||||||||| || |     
T  17088648 ctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatatttt-ttgcagttttagttctacctcctattttcaaa-tctag 17088551  T
Q  273 aaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 2733503 - 2733416
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaa 222  Q
    ||||||||||| ||||||| || | |||||||||| || || | ||| ||||| ||||||||||||| | |||||||| |||||||||    
T  2733503 aggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 17088244 - 17088310
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||| |||| |||||||||||||||||| |||| || ||| ||||||||||| |||||||||    
T  17088244 tttttttgcaattttagtcctacctcctattttc-aacttcagaaatgcagagaaatggcagttttag 17088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 45048583 - 45048533
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaat 286  Q
    ||||| |||| |||||||||||||||||| ||||||| ||||||||||||||    
T  45048583 ttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 37421285 - 37421322
Alignment:
Q  260 tttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  37421285 tttccaactccaaaaacgcacagaaatgacagttttag 37421322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 5818932 - 5819115
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 8647984 - 8647797
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| |||||| || ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  8647984 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 8647885  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8647884 ttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Complemental strand, 19359682 - 19359495
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  19359682 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19359583  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  19359582 ttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 138 - 320
Target Start/End: Original strand, 14215243 - 14215425
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||| || ||||||||||| | |||||||  |||||||| |||||| ||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 320  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 2864756 - 2864940
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || | |||||||||| ||||||| ||| || |||||||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 18182973 - 18183156
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 134 - 322
Target Start/End: Complemental strand, 8461478 - 8461290
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||| || ||| ||||||||| | |||||||| ||||||||||||||| ||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattttt 8461379  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  8461378 gctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 29454738 - 29454926
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||| ||| ||||||||||||||||||| | |||||||| |||||| |||||||| ||||    
T  29454738 aaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcattttt 29454837  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  29454838 gctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 164191 - 164376
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||| | ||||||| ||||||||| |||||||||| || |||||||||| ||| ||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 127 - 322
Target Start/End: Complemental strand, 25000643 - 25000448
Alignment:
Q  127 aaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattat 226  Q
    |||| |||||||||||||||||||||| || || ||||||||| ||||||| ||| ||||||||  ||||||||| | |||||||  ||| |||||||||    
T  25000643 aaaaaaaaaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattat 25000544  T
Q  227 cagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  25000543 catttttgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 24331558 - 24331747
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt- 233  Q
    ||||||||||||||||||| || ||||||||||   ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||  ||||     
T  24331558 aggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttt 24331657  T
Q  234 -gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
     |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24331658 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 136 - 315
Target Start/End: Complemental strand, 15709513 - 15709335
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| |||| |||||||||| ||||||  ||||| |||||||||||| |||| | |||||||| |||||| | |||||| || |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 130 - 322
Target Start/End: Complemental strand, 16019138 - 16018946
Alignment:
Q  130 ataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcag 229  Q
    |||| ||| ||||||||||||||| || || ||||||||| ||||||| ||| ||||| ||| ||||||||||| || ||||  || ||||||||||||     
T  16019138 ataataggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcat 16019039  T
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  16019038 ttttgttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 19359136 - 19359292
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || || ||||||||| ||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtt 293  Q
    |||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 126 - 297
Target Start/End: Complemental strand, 2865310 - 2865140
Alignment:
Q  126 aaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatta 225  Q
    ||||| || ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||    
T  2865310 aaaaaaaataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 2865211  T
Q  226 tcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||| ||||||| |||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  2865210 tcatttttgtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 2865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 18183515 - 18183354
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  18183515 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183416  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| |||  ||| |  |||||||||||||||||||| ||||||||||    
T  18183415 ttgcatttttcgtcctacc-cctcattttattctccaaaaacgcagagaaataacagttttag 18183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 5819474 - 5819314
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| ||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  ||||||||||||| |||||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 5819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 8647438 - 8647598
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||| |||||||| | |||||||  ||||||||||||||| ||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 8647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 15708970 - 15709130
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || | |||||||||| ||||||| |||||||| |||||||||||||| | |||||||| ||||||||||||||| |||||    
T  15708970 aggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 15709069  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||| |||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  15709070 ttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 15709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 24362382 - 24362221
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||| ||||||| ||||||| ||||||||| ||||||||||||| | || ||||| ||||||||| ||||| |||||    
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttg 24362283  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  24362282 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 29455289 - 29455127
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    ||||||||||||||| |||| || |||||||||||  ||||||| ||||||||| ||||||||||||| | |||||||  ||||||||||||||| ||||    
T  29455289 aaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 29455190  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  29455189 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 29455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 8460929 - 8461090
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    |||||||||| |||||||| ||||||| ||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  8460929 aggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 8461028  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||| |||| || ||||| |  ||||||||| |||||||||||||||||||||    
T  8461029 ttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagttttag 8461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 322
Target Start/End: Original strand, 24361843 - 24362022
Alignment:
Q  142 attacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatt 241  Q
    |||||||||||| ||  | ||||||||| ||| ||| |||||| |||||||||| ||||| | |||||||  ||||||||| ||||| ||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  242 tttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 15371873 - 15372060
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||| ||||||  ||||||| ||  ||||| ||||||||||||| | |||||||  ||||||||||||||| ||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtt----ttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| ||||||||||| ||||||| | |||||||||||||||| ||||    ||||||||||||| ||||||| |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 15372415 - 15372258
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| ||||||||| ||||| |||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||| || |||| ||| ||||| |   ||||||||||||||||||||||||||||||    
T  15372315 attttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttag 15372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 322
Target Start/End: Original strand, 24325218 - 24325397
Alignment:
Q  142 attacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatt 241  Q
    |||||||||||| ||  | ||||||||| ||| ||| |||||| |||||||||| ||||| | |||||||  ||||||||| ||||| |||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  242 tttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 164737 - 164576
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||| | ||||| || || |||||||||  |||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||    
T  164737 aggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 164638  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| |||||||| || ||||| |  ||||||||| | |||||||||||||||||||    
T  164637 ttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagttttag 164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 14215789 - 14215628
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||| ||||| || |||||||||| | ||||||| |||||| || ||||||||||||| | |||||||| ||||||||| ||||| |||||    
T  14215789 aggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 14215690  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||| || | || ||||| |  ||||||||||| |||||||||||||||||||    
T  14215689 ttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttag 14215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 14464066 - 14463906
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||  || |||||||||||| ||||||| |||||  |  || |||||||||||| ||||||||  |||||||||||||| ||||     
T  14464066 aggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttta 14463967  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  14463966 ttgcatttttcgtcctacc-ccaatttt-attctccaaaaacgcagagaaatgacagttttag 14463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 16018586 - 16018705
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||||||||||||||||||| || |||||||||||| || |||| ||| || |||||||||||||||||| |||||||| ||||||||||||| | |||    
T  16018586 aaaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttt 16018684  T
Q  233 tgttgcatttttcgtcctacc 253  Q
    | ||||||||| |||||||||    
T  16018685 tattgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 7349562 - 7349436
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||  ||||||| ||| ||||| ||| ||||||||| ||||||||||  ||||||| |||||| ||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  236 tgcatttttcgtcctacctcctatttt 262  Q
    |||| ||||| ||||||| || |||||    
T  7349462 tgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 297
Target Start/End: Original strand, 25000109 - 25000250
Alignment:
Q  155 tcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacct 254  Q
    ||||||||||||||| ||||||| ||  |||||||||||| |||||| | || ||||  |||||| |||||||| |||| |||||||||| ||||||||     
T  25000109 tcatcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccc 25000208  T
Q  255 cctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    || ||||| |  ||||||||||| |||||||||||||||||||    
T  25000209 cccatttt-attctccaaaaacgtagagaaatgacagttttag 25000250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 253
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||| ||||| ||||  ||||||| | |||||||  ||||||||||||||| |||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  236 tgcatttttcgtcctacc 253  Q
     ||||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 4222266 - 4222150
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||| || |||||||||||  | ||||| ||| ||||||||||||||||||| | |||||||  ||| |||| |||||| |||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  237 gcatttttcgtcctacc 253  Q
    |||||||||||||||||    
T  4222166 gcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 14462686 - 14462770
Alignment:
Q  218 ttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactc----caaaaacgcagagaaatgacagttttagg 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    || ||||| ||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttagg 14462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 297
Target Start/End: Complemental strand, 24332107 - 24331945
Alignment:
Q  138 cttaattacactttt-gttcatcgtgttttggcttactcacaaaactggtcatgccctttt-aaaataaaacaaaacagtccttcaattatcagtttt-g 234  Q
    ||||||||||||||| | ||||| ||||||||| ||||||| |||||| || |||| |||| |||| | |||||||| ||||| ||||||||| |||| |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  235 ttgcattttt-cgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||| ||||||||| || ||| | |  |||||||||||||||||||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattct-attctccaaaaacgcagagaaatgacagttttag 24331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 253
Target Start/End: Original strand, 4219663 - 4219780
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||  || | |||||| |||||||||| |||||||| | ||||||   |||||| | |||||| ||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  236 tgcatttttcgtcctacc 253  Q
    ||||||||||||||||||    
T  4219763 tgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 10721884 - 10721967
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctat 319  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  10721884 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 6019309 - 6019189
Alignment:
Q  142 attacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcat- 240  Q
    |||||| ||||| ||||| |||||||||| |||||| |||||| || ||| ||||||||| | |||||||| ||| || |||||||| |||||||||||     
T  6019309 attacatttttggtcatcatgttttggct-actcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  241 ttttcgtcctacctcctatttt 262  Q
    |||||||||||||||| |||||    
T  6019210 ttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||| ||||| || || |||||| |  ||||||| ||| ||||| ||||||||||||| | ||||||||  ||||||  |||||| ||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  236 tgcatttttcgtcctacctcctatttt 262  Q
    |||| ||||||||||||| || |||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 27307159 - 27307238
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    ||||| |||| ||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||| ||||||||    
T  27307159 ttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 6018315 - 6018441
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||| ||||| |  ||||||||||   ||||||| |||||||||||| |||||||||| | |||||||   | |||||||||||| |||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  237 gcatttttcgtcctacctcctattttca 264  Q
    ||| |||| ||||||||  |||||||||    
T  6018414 gcagttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 41834613 - 41834445
Alignment:
Q  128 aaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatc 227  Q
    |||||||||||||||||||||||||| || |||  ||||| |   ||||| ||| ||||| ||||  ||| | ||  |||||||| |||||  || ||||    
T  41834613 aaataaaaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtccta-aactatc 41834515  T
Q  228 a-gttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    | ||||| ||||| |||| |||||||||||||||||||| |||   |||||||||||||||||||||||||    
T  41834514 atgtttttttgcagttttagtcctacctcctattttcaa-ctcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 28494942 - 28495029
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacc-cctatgct 322  Q
    ||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||| |||||||  |||||| ||||||| ||||||||    
T  28494942 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 4624748 - 4624644
Alignment:
Q  158 tcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcct 257  Q
    |||||||||  | ||||||| ||| |||||||| |  ||||||| | ||||||||  || ||||||||||| || ||||||||||||||||||||| ||     
T  4624748 tcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctacccccc 4624649  T
Q  258 atttt 262  Q
    |||||    
T  4624648 atttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 28495288 - 28495227
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| |||||||||||||||||| ||||||| || ||||||||||||| ||||||||    
T  28495288 ttgcagttttagtcctacctcctattttc-aactccagaaccgcagagaaatgatagttttag 28495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 32305916 - 32305977
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| |||||||||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  32305916 ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 14340849 - 14340793
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| |||||| |||||  |||| ||||||||||||| |||||||||||||||||||    
T  14340849 ttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 27307499 - 27307444
Alignment:
Q  241 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||| |||||||||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 16752680 - 16752741
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| ||| |||||||||||||| ||||||| ||||||| |||||||| ||||||||    
T  16752680 ttgcagtttttgtcatacctcctattttc-aactccataaacgcaaagaaatgatagttttag 16752741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 16753021 - 16752948
Alignment:
Q  230 ttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttt 304  Q
    |||| ||||| |||| | |||| ||||||||||||| ||||| ||||||||| ||||| ||||||||||| ||||    
T  16753021 tttttttgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcagttt 16752948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 19291392 - 19291517
Alignment:
Q  172 actcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactcca 271  Q
    |||||||||| ||||| |  | |||| ||||  |||||||  |||||| || |||  ||||| ||||| |||| ||| || |||||  |||| |||||||    
T  19291392 actcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcttatctccttatttccaactcca 19291491  T
Q  272 aaaacgcagagaaatgacagttttag 297  Q
     ||||||| |||||||||||||||||    
T  19291492 taaacgcacagaaatgacagttttag 19291517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 135 - 320
Target Start/End: Complemental strand, 2213 - 2028
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| |||| || ||||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  2213 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2114  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 320  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2113 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 1666 - 1827
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || || ||||||||| ||||||| ||||||||| ||||||||||||| | |||||||   |||||||||||||| |||||    
T  1666 aggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttg 1765  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  1766 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 136 - 315
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||| || |||||||||||| |||| || ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctaccc 315  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||| ||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 10643 - 10781
Alignment:
Q  158 tcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcct 257  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||| | |||||||| ||||||||| ||||| ||| ||||||||||||||||||||  |     
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctcc 10742  T
Q  258 attttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |  ||||||||| |||||||||||||||||||||    
T  10743 atttt-attctccaaaaatgcagagaaatgacagttttag 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 179 - 322
Target Start/End: Original strand, 4246 - 4389
Alignment:
Q  179 aaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgc 278  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||    
T  4246 aaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaaatgc 4345  T
Q  279 agagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  4346 agagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 4753 - 4592
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| |||||| |||||||| |||||    
T  4753 aggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 4654  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||| ||||||||||||||||||||    
T  4653 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 133 - 322
Target Start/End: Complemental strand, 64853 - 64664
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    ||||| ||||||||||||||| || |||||||||||| ||||||| |||||||||  |||||||||||| | |||||||| |||||| |||||||| |||    
T  64853 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttt 64754  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    ||||||||||||||||||| || |||||||||||||||| ||||| ||| |||| ||||||||||||||||||| ||||||| |||||||    
T  64753 tgttgcatttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 64300 - 64462
Alignment:
Q  134 aaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||||| || |||||||||| | ||||||| |||||| || || |||||||||| | |||||||| ||||||||||||||| ||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcattttt 64399  T
Q  234 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||| |||| || ||||| |  |||||||||||||||||||||||||||||||    
T  64400 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 205815 - 205754
Alignment:
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  205815 ttgcagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 1286 - 1125
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgt 235  Q
    |||||||||||||||||  || |||||||||||||||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  236 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttag 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 138 - 297
Target Start/End: Original strand, 755 - 912
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||| ||||||| | ||||||| ||||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 322
Target Start/End: Complemental strand, 17019 - 16855
Alignment:
Q  158 tcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcct 257  Q
    |||||||||| ||||||||| |||||| ||  ||| |||||||| | |||||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  17019 tcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcct 16920  T
Q  258 attttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  16919 attttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 16565 - 16656
Alignment:
Q  205 aacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||| |||| || ||||| |  |||||||||||||||||||||||||||||||    
T  16565 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 4792 - 4953
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  4792 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 4891  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  4892 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 5334 - 5160
Alignment:
Q  138 cttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttg 237  Q
    |||||||||||||||| || |||||||||||| || |||| ||||||||| || |||||||||| | || ||||| ||  ||||||||||| ||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  238 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccc 316  Q
    ||||||||||    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| || ||||||    
T  5234 catttttcgt----cctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttacccc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 134219 - 134058
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||||||||||| || |||||||||||| ||||||| ||||| ||||||||||||||| | | ||||||||  ||||||||||| || |||||    
T  134219 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttg 134120  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  134119 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 134058  T

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Target: scaffold0432 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 9935 - 10116
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||| ||||| || ||||||||| || || |||| |||||| || ||||||||||| ||| |||||||  ||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 322  Q
    | ||||| ||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

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Target: scaffold0432; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||  ||||||| ||||||||  | ||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  239 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 296  Q
    ||||||||||||||| || ||||| |  |||||||||  |||||||||||||||||||    
T  10314 atttttcgtcctacc-cccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 42161 - 42330
Alignment:
Q  128 aaataaaaggcttaattacactttt-gttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattat 226  Q
    ||||| |||| |||||||||||||| |||| |||||||||||  || |||| |||||| || |||| |||||||| | |||||||| ||| |||||||||    
T  42161 aaatataaggtttaattacacttttagttc-tcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattat 42259  T
Q  227 cagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    || ||||||||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||    
T  42260 catttttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttag 42330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 42704 - 42544
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttg 234  Q
    ||||||||||| |||||||  | |||||||||||  ||||||  |||||| |  ||||||||||||| | |||||||| |||||||| |||||| |||||    
T  42704 aggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 42605  T
Q  235 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    || |||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  42604 tttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 42544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 28798 - 28674
Alignment:
Q  126 aaaaataaaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaatta 225  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||| || ||||||||||||||||||||||| | |||||||| ||| ||||||||    
T  28798 aaaaataaaaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaatta 28699  T
Q  226 tcagttttgttgcatttttcgtcct 250  Q
    ||| |||||||||| ||||||||||    
T  28698 tcatttttgttgcagttttcgtcct 28674  T

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Target: scaffold0176 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 18832 - 18994
Alignment:
Q  133 aaaggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttt 232  Q
    |||||||| |||||||||||| || |  ||||||||| ||||||| ||||||||| ||||||||||||| | |||||||| || |||||||||||| |||    
T  18832 aaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttt 18931  T
Q  233 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 297  Q
    ||||||||||||| ||||||| || ||||| |  |||||||||||||||||||| ||||||||||    
T  18932 tgttgcatttttcatcctacc-cccatttt-attctccaaaaacgcagagaaataacagttttag 18994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  136 ggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagtttt 233  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||| ||| ||||||||||||| | |||||||| ||||||||||||||| ||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 568 - 692
Alignment:
Q  137 gcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgtt 236  Q
    ||||||||||||||||| || |||||||||||| ||||||| ||| || |||||||||||||||| | |||||||| ||||||||||||||| |||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  237 gcatttttcgtcctacctcctattt 261  Q
    | ||||||||||  |||||| ||||    
T  668 gtatttttcgtctcacctcccattt 692  T

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Target: scaffold1696 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 454 - 565
Alignment:
Q  140 taattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgca 239  Q
    |||||||| ||||| || |||||||||||| ||||||| ||| ||||||||  ||||||||| |||||| ||  ||||||||||||||| ||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  240 tttttcgtcctac 252  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 62000 - 61877
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || |||||||||||  ||||||| ||| ||||| | ||||||||||||| |||||||   || ||||| ||||| |||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  239 atttttcgtcctacctcctatttt 262  Q
    ||||||||||||||| || |||||    
T  61900 atttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 61027 - 61109
Alignment:
Q  135 aggcttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtcc 217  Q
    |||||||| |||||||||| || |||||||||||| ||||||| ||| || || |||| |||||||||| |||||| ||||||    
T  61027 aggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaagcagtcc 61109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 7778 - 7691
Alignment:
Q  191 cccttttaaaataaaacaaaacagtccttcaattatcagttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgca 279  Q
    ||||||||||| | |||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||||| |  |||||||||||||    
T  7778 cccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt-atcctccaaaaacgca 7691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  139 ttaattacacttttgttcatcgtgttttggcttactcacaaaactggtcatgcccttttaaaataaaacaaaacagtccttcaattatcagttttgttgc 238  Q
    ||||||||||||||| || || ||||||||  |||| || ||||||||| | ||||||||||| | | |||||| ||||||||||||||| |||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  239 a 239  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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