View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2722_high_13 (Length: 449)

Name: NF2722_high_13
Description: NF2722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2722_high_13
NF2722_high_13
[»] chr4 (8 HSPs)
chr4 (1-432)||(7224939-7225366)
chr4 (80-255)||(8186311-8186486)
chr4 (74-243)||(21833241-21833410)
chr4 (146-204)||(1755548-1755606)
chr4 (73-186)||(1547724-1547837)
chr4 (151-258)||(553759-553866)
chr4 (77-186)||(571256-571365)
chr4 (77-122)||(641933-641978)
[»] chr8 (5 HSPs)
chr8 (77-186)||(32151894-32152003)
chr8 (73-189)||(18314656-18314772)
chr8 (77-183)||(17635680-17635786)
chr8 (73-118)||(17643024-17643069)
chr8 (152-185)||(18318665-18318698)
[»] chr1 (2 HSPs)
chr1 (77-273)||(19467362-19467561)
chr1 (77-272)||(7555124-7555319)
[»] chr5 (2 HSPs)
chr5 (149-272)||(32268533-32268656)
chr5 (239-272)||(41900429-41900462)
[»] chr6 (2 HSPs)
chr6 (159-205)||(6395545-6395591)
chr6 (77-122)||(7993631-7993676)
[»] chr7 (3 HSPs)
chr7 (77-186)||(7977799-7977908)
chr7 (145-189)||(10169068-10169112)
chr7 (145-189)||(10176593-10176637)
[»] chr3 (2 HSPs)
chr3 (230-274)||(51763323-51763367)
chr3 (98-205)||(1657474-1657581)
[»] scaffold1155 (1 HSPs)
scaffold1155 (168-272)||(1821-1925)
[»] scaffold0345 (1 HSPs)
scaffold0345 (168-272)||(8291-8395)
[»] scaffold0105 (1 HSPs)
scaffold0105 (168-272)||(30584-30688)


Alignment Details
Target: chr4 (Bit Score: 346; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 432
Target Start/End: Complemental strand, 7225366 - 7224939
Alignment:
Q  1 cctacggagttttaaaagtgctgatgaaagagcctctactccaccaacaatgtttgtcaaccttccactttgactaaggtcgagttcttcgagcaaaggg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7225366 cctacggagtttgaaaagtgctgatgaaagagcctctactccaccaacaatgtttgtcaaccttccacgttgactaaggtcgagttcttcgagcaaaggg 7225267  T
Q  101 aaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgca 200  Q
    |||||||  |||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7225266 aaacaatccgcgatgaggaacatgtcagtgctagtgacagaataaatgt-ggaacatgtgagagaggtcaaagttgtaatattttgagaaagagcttgca 7225168  T
Q  201 acccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgagagattttgaggagaagcgtgtggagttcaaattg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||    
T  7225167 acccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggaaaacgagagatttcgaggagaagcgcgtggagttcaaattg 7225068  T
Q  301 gaagcttgggatatcagtagtgtagcaacgggagaggtttagggaggtgagattgggaaacctttgaaataggagacaagagtaagggagtgttgcagta 400  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   | || ||||||||||||||||| |    
T  7225067 gaagctagggatatcagtagtgtagcaacggaagaggtttagggaggtgagattgggaaacctttgaaatagg---cgagcgtaagggagtgttgcagga 7224971  T
Q  401 tagatagtgagagagaattggaaattgttggt 432  Q
    ||||||||||||||||||||||||||||||||    
T  7224970 tagatagtgagagagaattggaaattgttggt 7224939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 255
Target Start/End: Complemental strand, 8186486 - 8186311
Alignment:
Q  80 tcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttgtaa 179  Q
    ||||||||||| || ||||| ||||||| |||||||||||| |||||||||||| ||| |||   |||||||||||||||||| ||||||||||||||||    
T  8186486 tcgagttcttctaggaaaggaaaacaatcggcgatgaggaagatgtcagtgctattgatagattcaatgttggaacatgtgagtgaggtcaaagttgtaa 8186387  T
Q  180 tattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaa 255  Q
    ||||| | || ||| || |||| |||  ||| |||||| ||| ||| || |||| ||| ||||||||||| |||||    
T  8186386 tatttcgggagagaactcgcaatccatttgcaggaatggtgggtttgttagagagattgagtgatgtgaggttcaa 8186311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 21833410 - 21833241
Alignment:
Q  74 ctaaggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaag 173  Q
    |||| ||||||||||||| |||| |||||||| | | |||||||||||| ||||||| || |||||  |  ||| |||||||| ||||| ||||||||||    
T  21833410 ctaacgtcgagttcttcgtgcaaggggaaacattcgacgatgaggaacaggtcagtggtattgaaattagcaattttggaacaagtgagagaggtcaaag 21833311  T
Q  174 ttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtga 243  Q
    | ||||| ||||| | || | || ||||||||  ||| |||||| ||| ||| || |||||||| |||||    
T  21833310 tagtaatgttttgtgcaaaaactcgcaacccatctgcgggaatggtgggtttgttggagatattgagtga 21833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 1755548 - 1755606
Alignment:
Q  146 atgttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgcaaccc 204  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||    
T  1755548 atgttggaacatgtgagagaggtcaaagttgtaatcttttgagagaaagcttgcaaccc 1755606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 1547837 - 1547724
Alignment:
Q  73 actaaggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaa 172  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||  ||||||||| ||||   |  |    |||||| |||||||||||| || ||||||    
T  1547837 actaaggtcgagttcttcgagaaaagggaaacaatcggcaatgatcaacatgtcaatgctttggggacgggaaatgtgggaacatgtgagagatgtcaaa 1547738  T
Q  173 gttgtaatattttg 186  Q
    |||||||| |||||    
T  1547737 gttgtaatgttttg 1547724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 553759 - 553866
Alignment:
Q  151 ggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagt 250  Q
    |||||| ||||| ||||||||||||||||| ||||| || | |||| ||||||||  ||| |||||| ||| ||| |  |||| ||  |||||||||||     
T  553759 ggaacaggtgagagaggtcaaagttgtaatgttttgggagaaagctcgcaacccatttgcgggaatggtgggtttttgggagagatcgagtgatgtgagg 553858  T
Q  251 ttcaatgg 258  Q
    ||||||||    
T  553859 ttcaatgg 553866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 571256 - 571365
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 176  Q
    |||| |||||||||||||||||||||||| |  | |||||| |||| ||| ||| || ||| ||||    ||| ||||||  |||| || ||||||||||    
T  571256 aggtggagttcttcgagcaaagggaaacagtccgagatgagcaacaagtcggtggtactgatagaatccttgtaggaacaattgagagatgtcaaagttg 571355  T
Q  177 taatattttg 186  Q
    ||||||||||    
T  571356 taatattttg 571365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 641933 - 641978
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaaca 122  Q
    ||||| ||||||||||| ||||||||||||||||| || |||||||    
T  641933 aggtcaagttcttcgagtaaagggaaacaattggcaataaggaaca 641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 32151894 - 32152003
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 176  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||| ||| |||| | |||||||| ||||    ||||| ||||| |||||||||||||    
T  32151894 aggtcaagttcttcgagcaaagggaaacaatcggcaatgaggaacaagtcggtgccattgaaagaataaatacgagaacaagtgagagaggtcaaagttg 32151993  T
Q  177 taatattttg 186  Q
    |||| |||||    
T  32151994 taatgttttg 32152003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 18314772 - 18314656
Alignment:
Q  73 actaaggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaa 172  Q
    |||||||||||||||||||||||||||||||||||  || |||||||| |  ||||||| |  || |||   |||||  ||||||| ||| |||||||||    
T  18314772 actaaggtcgagttcttcgagcaaagggaaacaatcagcaatgaggaagagatcagtgccatggagagattgaatgtaagaacatgagagtgaggtcaaa 18314673  T
Q  173 gttgtaatattttgaga 189  Q
    |||||||||||||||||    
T  18314672 gttgtaatattttgaga 18314656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 17635786 - 17635680
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 176  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||  ||||  || ||    ||||  |||||| ||||| |||||||||||||    
T  17635786 aggtcaagttcttcgagcaaagggaaacaaccggcgatgaggaacatgtcaaagctacggagagtgttaatgcaggaacaagtgagagaggtcaaagttg 17635687  T
Q  177 taatatt 183  Q
    |||||||    
T  17635686 taatatt 17635680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 17643069 - 17643024
Alignment:
Q  73 actaaggtcgagttcttcgagcaaagggaaacaattggcgatgagg 118  Q
    |||||| ||||||||||| ||||||||||||||||  |||||||||    
T  17643069 actaagatcgagttcttctagcaaagggaaacaatcagcgatgagg 17643024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 18318698 - 18318665
Alignment:
Q  152 gaacatgtgagcgaggtcaaagttgtaatatttt 185  Q
    ||||||||||| ||||||||||||||||||||||    
T  18318698 gaacatgtgagtgaggtcaaagttgtaatatttt 18318665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 273
Target Start/End: Complemental strand, 19467561 - 19467362
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 176  Q
    |||| |||||||||||||||||| ||||| |  ||||||||||||| ||||||| || |||||     ||||| | |||| ||||| |||||||||||||    
T  19467561 aggttgagttcttcgagcaaaggaaaacattccgcgatgaggaacaggtcagtggtattgaaatctgcaatgtcgaaacaagtgagagaggtcaaagttg 19467462  T
Q  177 taatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgag---tttcaatggtaaatgagagatttt 273  Q
    ||||||||||||  | | || ||||||||  ||| |||||| ||  | | || |||||| | || ||||||||   ||||||||| ||||||||||||||    
T  19467461 taatattttgagtgaaaactcgcaacccatttgcgggaatggtgtgtctgttggagataatgagagatgtgagttttttcaatgggaaatgagagatttt 19467362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 272
Target Start/End: Original strand, 7555124 - 7555319
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 176  Q
    |||| |||||||||||||||||||||||| |  || ||||| |||| |||| ||||| ||| ||||   || |||||||| ||||| ||||| |||||||    
T  7555124 aggttgagttcttcgagcaaagggaaacattcagcaatgagtaacaagtcattgctattgatagaatccattttggaacaagtgagtgaggttaaagttg 7555223  T
Q  177 taatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgagagattt 272  Q
    |||||||||| || | |||| |||| |||  ||| || ||| ||| ||  || || |||| ||||||||| || |||||||| |||  ||||||||    
T  7555224 taatattttgggagaaagctcgcaatccaattgcagggatggtgggttggttggaaatatcaagtgatgttaggttcaatgggaaacaagagattt 7555319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 32268533 - 32268656
Alignment:
Q  149 ttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtga 248  Q
    |||||||| ||||| ||||||||||||||||| || |  |||| ||  |||||||||  ||  ||||||||| |||| || |||| ||| ||||| ||||    
T  32268533 ttggaacaagtgagagaggtcaaagttgtaatcttcttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtga 32268632  T
Q  249 gtttcaatggtaaatgagagattt 272  Q
    |||||||||| ||| |||||||||    
T  32268633 gtttcaatggaaaacgagagattt 32268656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 41900462 - 41900429
Alignment:
Q  239 agtgatgtgagtttcaatggtaaatgagagattt 272  Q
    |||||||||||||||||||| |||||||||||||    
T  41900462 agtgatgtgagtttcaatggaaaatgagagattt 41900429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 6395545 - 6395591
Alignment:
Q  159 tgagcgaggtcaaagttgtaatattttgagaaagagcttgcaaccca 205  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||    
T  6395545 tgagagaggtcaaagttgtaatattttgggagagagcttgcaaccca 6395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 7993676 - 7993631
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaaca 122  Q
    |||| |||||||| ||||||||||||||||||||| ||||| ||||    
T  7993676 aggttgagttctttgagcaaagggaaacaattggcaatgagtaaca 7993631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 7977799 - 7977908
Alignment:
Q  77 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 176  Q
    |||||||||||||| ||||||||||||||||  || ||||| |||||||   || || | | |||   |||||| |||||| |||| |||||||||||||    
T  7977799 aggtcgagttcttcaagcaaagggaaacaatctgctatgagaaacatgtggttgatattaatagattcaatgttagaacatttgagtgaggtcaaagttg 7977898  T
Q  177 taatattttg 186  Q
     |||||||||    
T  7977899 caatattttg 7977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 10169112 - 10169068
Alignment:
Q  145 aatgttggaacatgtgagcgaggtcaaagttgtaatattttgaga 189  Q
    ||||| |||||| ||||| |||||||||||| |||||||||||||    
T  10169112 aatgtcggaacaagtgagagaggtcaaagttctaatattttgaga 10169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 10176637 - 10176593
Alignment:
Q  145 aatgttggaacatgtgagcgaggtcaaagttgtaatattttgaga 189  Q
    ||||| |||||| ||||| |||||||||||| |||||||||||||    
T  10176637 aatgtcggaacaagtgagagaggtcaaagttctaatattttgaga 10176593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 51763367 - 51763323
Alignment:
Q  230 gagatattaagtgatgtgagtttcaatggtaaatgagagattttg 274  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||    
T  51763367 gagagattaagtgatgtgagtttcaatgggaaacgagagattttg 51763323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 1657474 - 1657581
Alignment:
Q  98 gggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagctt 197  Q
    ||||||||||  || |||||||||| |||||||| | ||| |||   ||||  |||||| ||||| ||||| |||||| |||| |||||||| | |||||    
T  1657474 gggaaacaatcagcaatgaggaacaggtcagtgcgattgatagattcaatgaaggaacacgtgagagaggttaaagttttaatgttttgagagaaagctt 1657573  T
Q  198 gcaaccca 205  Q
    ||||||||    
T  1657574 gcaaccca 1657581  T

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Target: scaffold1155 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 272
Target Start/End: Complemental strand, 1925 - 1821
Alignment:
Q  168 tcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgaga 267  Q
    ||||||||||||||||||| || | | || ||||||||  ||| ||||| |||| ||  |  |||| ||| ||||||||||| |||||||| ||| ||||    
T  1925 tcaaagttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgaga 1826  T
Q  268 gattt 272  Q
    |||||    
T  1825 gattt 1821  T

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Target: scaffold0345 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 272
Target Start/End: Original strand, 8291 - 8395
Alignment:
Q  168 tcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgaga 267  Q
    ||||||||||||||||||| || | | || ||||||||  ||| ||||| |||| ||  |  |||| ||| ||||||||||| |||||||| ||| ||||    
T  8291 tcaaagttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgaga 8390  T
Q  268 gattt 272  Q
    |||||    
T  8391 gattt 8395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 272
Target Start/End: Complemental strand, 30688 - 30584
Alignment:
Q  168 tcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgaga 267  Q
    ||||||||||||||||||| || | | || ||||||||  ||| ||||| |||| ||  |  |||| ||| ||||||||||| |||||||| ||| ||||    
T  30688 tcaaagttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgaga 30589  T
Q  268 gattt 272  Q
    |||||    
T  30588 gattt 30584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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