View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2722_low_7 (Length: 684)

Name: NF2722_low_7
Description: NF2722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2722_low_7
NF2722_low_7
[»] chr8 (51 HSPs)
chr8 (393-612)||(8410794-8411014)
chr8 (214-386)||(11287779-11287951)
chr8 (213-389)||(12353286-12353460)
chr8 (213-389)||(10007687-10007864)
chr8 (213-357)||(18978051-18978195)
chr8 (213-389)||(12351921-12352097)
chr8 (213-388)||(18979046-18979220)
chr8 (210-385)||(45112875-45113043)
chr8 (213-390)||(10006343-10006521)
chr8 (213-389)||(24122883-24123058)
chr8 (213-389)||(30335639-30335816)
chr8 (222-390)||(22220387-22220556)
chr8 (249-386)||(29968298-29968434)
chr8 (213-357)||(18970942-18971085)
chr8 (222-389)||(22221297-22221465)
chr8 (222-389)||(22227639-22227807)
chr8 (218-389)||(42982584-42982758)
chr8 (213-357)||(24123827-24123967)
chr8 (213-362)||(18488187-18488336)
chr8 (210-389)||(45114438-45114617)
chr8 (222-384)||(1824011-1824174)
chr8 (222-384)||(1858456-1858619)
chr8 (259-386)||(11282011-11282138)
chr8 (259-389)||(5513982-5514111)
chr8 (259-389)||(11283180-11283310)
chr8 (213-318)||(30570181-30570286)
chr8 (13-105)||(39889321-39889410)
chr8 (13-92)||(28977933-28978009)
chr8 (228-387)||(43661267-43661427)
chr8 (281-389)||(1823552-1823660)
chr8 (281-389)||(1857997-1858105)
chr8 (258-389)||(8388464-8388593)
chr8 (213-325)||(30568950-30569062)
chr8 (223-391)||(36249550-36249718)
chr8 (215-389)||(30336427-30336602)
chr8 (213-389)||(43661747-43661924)
chr8 (258-386)||(8389659-8389787)
chr8 (213-268)||(17844395-17844450)
chr8 (251-387)||(29043400-29043536)
chr8 (332-390)||(24483142-24483200)
chr8 (312-389)||(5514294-5514370)
chr8 (97-138)||(28977860-28977901)
chr8 (272-357)||(32207309-32207394)
chr8 (259-389)||(32968456-32968586)
chr8 (635-668)||(8411001-8411034)
chr8 (272-357)||(24488664-24488748)
chr8 (338-390)||(3819488-3819539)
chr8 (221-265)||(11288831-11288875)
chr8 (333-389)||(11456638-11456694)
chr8 (306-390)||(38974794-38974878)
chr8 (306-390)||(39005892-39005976)
[»] scaffold0302 (3 HSPs)
scaffold0302 (210-389)||(17470-17649)
scaffold0302 (13-141)||(17720-17848)
scaffold0302 (213-391)||(18701-18879)
[»] chr2 (44 HSPs)
chr2 (213-389)||(36449778-36449954)
chr2 (215-386)||(7898694-7898865)
chr2 (213-386)||(36450846-36451018)
chr2 (213-389)||(38840418-38840594)
chr2 (213-389)||(38839242-38839418)
chr2 (220-389)||(7899814-7899983)
chr2 (213-389)||(41879137-41879313)
chr2 (213-389)||(13570482-13570658)
chr2 (213-389)||(22587879-22588054)
chr2 (213-390)||(41878091-41878264)
chr2 (225-389)||(11257622-11257786)
chr2 (213-389)||(22848191-22848368)
chr2 (258-390)||(18299372-18299504)
chr2 (213-325)||(22587564-22587676)
chr2 (259-389)||(11938760-11938889)
chr2 (213-389)||(11258735-11258912)
chr2 (272-389)||(23869519-23869635)
chr2 (213-386)||(8534586-8534758)
chr2 (213-386)||(26544152-26544325)
chr2 (213-389)||(16446154-16446330)
chr2 (222-389)||(18797246-18797415)
chr2 (272-389)||(18904367-18904484)
chr2 (213-389)||(802516-802691)
chr2 (213-357)||(810706-810850)
chr2 (213-389)||(18905912-18906088)
chr2 (284-386)||(8535652-8535752)
chr2 (13-90)||(8972574-8972648)
chr2 (213-357)||(13568004-13568148)
chr2 (258-372)||(24475241-24475355)
chr2 (213-386)||(28617926-28618098)
chr2 (312-389)||(18868924-18869001)
chr2 (222-388)||(13030293-13030457)
chr2 (306-389)||(32739623-32739706)
chr2 (18-90)||(35780107-35780176)
chr2 (213-357)||(26545445-26545590)
chr2 (20-90)||(20440113-20440180)
chr2 (20-90)||(20445718-20445785)
chr2 (224-311)||(27553701-27553788)
chr2 (213-325)||(32739715-32739827)
chr2 (294-389)||(1034475-1034570)
chr2 (213-349)||(18869086-18869224)
chr2 (307-361)||(24476863-24476917)
chr2 (307-355)||(18300743-18300791)
chr2 (333-389)||(26829333-26829389)
[»] chr3 (64 HSPs)
chr3 (213-389)||(54540715-54540891)
chr3 (215-386)||(7268754-7268924)
chr3 (213-389)||(22776737-22776913)
chr3 (215-386)||(7267647-7267817)
chr3 (213-389)||(55191920-55192095)
chr3 (213-389)||(19984849-19985025)
chr3 (213-389)||(54539755-54539931)
chr3 (213-389)||(19985995-19986173)
chr3 (213-319)||(22775816-22775922)
chr3 (225-388)||(8456479-8456642)
chr3 (213-365)||(34940112-34940264)
chr3 (222-389)||(51038723-51038891)
chr3 (223-389)||(7758402-7758569)
chr3 (213-389)||(29931226-29931403)
chr3 (213-389)||(29980380-29980557)
chr3 (213-390)||(49216246-49216423)
chr3 (213-389)||(53614819-53614995)
chr3 (213-325)||(10457604-10457716)
chr3 (260-391)||(46719939-46720070)
chr3 (213-390)||(47614184-47614362)
chr3 (217-386)||(49398130-49398298)
chr3 (222-390)||(51037535-51037703)
chr3 (258-390)||(51469971-51470103)
chr3 (213-389)||(12700175-12700350)
chr3 (213-366)||(4271463-4271616)
chr3 (215-356)||(55191544-55191684)
chr3 (213-357)||(31645005-31645149)
chr3 (257-390)||(52840573-52840706)
chr3 (258-386)||(47610550-47610678)
chr3 (13-90)||(18009857-18009931)
chr3 (287-385)||(24516464-24516562)
chr3 (220-386)||(39843054-39843220)
chr3 (222-319)||(47615510-47615608)
chr3 (284-389)||(29932695-29932799)
chr3 (284-389)||(29981849-29981953)
chr3 (226-389)||(47609697-47609861)
chr3 (213-269)||(49220477-49220533)
chr3 (213-389)||(52839037-52839213)
chr3 (213-389)||(12703424-12703600)
chr3 (228-386)||(23770346-23770505)
chr3 (225-389)||(8875906-8876071)
chr3 (224-367)||(11670406-11670550)
chr3 (453-501)||(19543733-19543781)
chr3 (294-357)||(534531-534594)
chr3 (213-386)||(34019069-34019241)
chr3 (258-389)||(46721190-46721321)
chr3 (287-389)||(5029682-5029783)
chr3 (331-389)||(47615591-47615649)
chr3 (284-386)||(53616012-53616114)
chr3 (222-386)||(51347271-51347436)
chr3 (224-315)||(10583976-10584067)
chr3 (213-320)||(26722601-26722708)
chr3 (213-297)||(49401413-49401497)
chr3 (260-389)||(11671313-11671441)
chr3 (213-386)||(54986931-54987103)
chr3 (260-318)||(53897173-53897231)
chr3 (293-390)||(535787-535884)
chr3 (329-389)||(5001200-5001260)
chr3 (213-268)||(6171168-6171223)
chr3 (306-389)||(28263129-28263212)
chr3 (213-299)||(32829829-32829915)
chr3 (258-389)||(51470425-51470555)
chr3 (213-316)||(26723786-26723889)
chr3 (291-390)||(53901391-53901488)
[»] chr5 (43 HSPs)
chr5 (213-389)||(40255597-40255773)
chr5 (213-389)||(28538676-28538852)
chr5 (213-389)||(36486413-36486589)
chr5 (213-386)||(28539745-28539917)
chr5 (213-389)||(33160212-33160387)
chr5 (213-387)||(36485302-36485476)
chr5 (213-389)||(18486826-18487003)
chr5 (213-386)||(24332916-24333089)
chr5 (213-389)||(25523069-25523246)
chr5 (213-389)||(16650779-16650956)
chr5 (213-389)||(1797222-1797397)
chr5 (213-386)||(20216687-20216861)
chr5 (213-389)||(19752912-19753088)
chr5 (218-390)||(22940552-22940724)
chr5 (213-381)||(1015492-1015660)
chr5 (213-390)||(20214195-20214372)
chr5 (213-390)||(1796053-1796231)
chr5 (213-389)||(19754054-19754232)
chr5 (213-386)||(1016789-1016961)
chr5 (222-389)||(25055412-25055580)
chr5 (213-389)||(18485138-18485322)
chr5 (222-386)||(42195137-42195300)
chr5 (213-348)||(25524022-25524158)
chr5 (258-389)||(5778806-5778937)
chr5 (294-393)||(25056387-25056486)
chr5 (213-319)||(5961476-5961582)
chr5 (215-336)||(16650045-16650167)
chr5 (309-389)||(25524148-25524229)
chr5 (213-304)||(14061537-14061628)
chr5 (259-361)||(2686372-2686474)
chr5 (455-598)||(20424808-20424952)
chr5 (258-357)||(5730832-5730931)
chr5 (294-357)||(7311622-7311685)
chr5 (272-389)||(5777901-5778016)
chr5 (272-346)||(21835083-21835157)
chr5 (307-389)||(33158098-33158180)
chr5 (329-389)||(5730441-5730502)
chr5 (13-66)||(32234222-32234275)
chr5 (211-302)||(24468509-24468601)
chr5 (222-389)||(42196133-42196301)
chr5 (455-538)||(12402285-12402368)
chr5 (331-390)||(41663768-41663827)
chr5 (258-386)||(2186774-2186901)
[»] chr6 (31 HSPs)
chr6 (213-389)||(10784592-10784770)
chr6 (213-384)||(29473082-29473253)
chr6 (215-389)||(14822360-14822534)
chr6 (213-386)||(1829528-1829701)
chr6 (213-389)||(16704422-16704598)
chr6 (215-389)||(14823502-14823677)
chr6 (213-357)||(26574979-26575123)
chr6 (213-389)||(7316218-7316395)
chr6 (213-361)||(10785838-10785986)
chr6 (213-390)||(7314879-7315056)
chr6 (258-389)||(8659265-8659396)
chr6 (258-389)||(27437828-27437959)
chr6 (258-386)||(34834549-34834677)
chr6 (242-389)||(26574619-26574765)
chr6 (258-386)||(5658759-5658887)
chr6 (258-389)||(8660174-8660304)
chr6 (222-388)||(12382644-12382811)
chr6 (272-389)||(8821873-8821990)
chr6 (258-389)||(3721612-3721743)
chr6 (272-390)||(8822777-8822895)
chr6 (213-370)||(26949110-26949264)
chr6 (287-389)||(27322067-27322168)
chr6 (339-389)||(1828739-1828789)
chr6 (213-390)||(16703569-16703734)
chr6 (259-389)||(17496793-17496928)
chr6 (222-319)||(26717046-26717144)
chr6 (272-357)||(3333010-3333095)
chr6 (288-355)||(12350832-12350898)
chr6 (338-389)||(27447963-27448014)
chr6 (215-256)||(13345682-13345723)
chr6 (313-389)||(6842308-6842384)
[»] chr4 (51 HSPs)
chr4 (213-389)||(31599789-31599965)
chr4 (213-390)||(31600910-31601087)
chr4 (213-386)||(35935458-35935631)
chr4 (213-389)||(52491534-52491708)
chr4 (213-386)||(8758766-8758935)
chr4 (213-389)||(10448185-10448361)
chr4 (222-389)||(1290131-1290299)
chr4 (257-389)||(1963196-1963328)
chr4 (213-386)||(35934347-35934518)
chr4 (213-389)||(17388135-17388311)
chr4 (240-389)||(8757675-8757822)
chr4 (214-389)||(10447006-10447182)
chr4 (213-390)||(50909597-50909775)
chr4 (213-389)||(17382993-17383169)
chr4 (222-389)||(1835035-1835203)
chr4 (213-386)||(12129626-12129800)
chr4 (286-376)||(21539069-21539159)
chr4 (222-390)||(1964374-1964543)
chr4 (258-387)||(19750545-19750673)
chr4 (258-387)||(19789133-19789261)
chr4 (258-390)||(10471358-10471490)
chr4 (222-390)||(1834118-1834288)
chr4 (213-325)||(21178060-21178172)
chr4 (258-394)||(25684929-25685065)
chr4 (214-389)||(13509284-13509459)
chr4 (258-389)||(5526096-5526226)
chr4 (258-389)||(10470546-10470677)
chr4 (258-389)||(25685792-25685923)
chr4 (213-268)||(46637804-46637859)
chr4 (272-389)||(48780248-48780365)
chr4 (258-389)||(5525360-5525490)
chr4 (227-389)||(26421561-26421722)
chr4 (258-386)||(37728535-37728662)
chr4 (218-386)||(1289100-1289269)
chr4 (13-90)||(44890878-44890952)
chr4 (213-300)||(54107948-54108035)
chr4 (307-389)||(49308046-49308127)
chr4 (258-389)||(13386502-13386634)
chr4 (213-318)||(8896835-8896940)
chr4 (13-63)||(43242654-43242704)
chr4 (258-389)||(13386014-13386147)
chr4 (213-386)||(8155741-8155914)
chr4 (306-386)||(33296227-33296306)
chr4 (213-386)||(55603456-55603628)
chr4 (313-389)||(50909273-50909348)
chr4 (258-309)||(2193425-2193476)
chr4 (286-389)||(3928856-3928959)
chr4 (259-381)||(46638696-46638817)
chr4 (338-392)||(51291421-51291475)
chr4 (341-389)||(20919584-20919632)
chr4 (213-265)||(50909386-50909438)
[»] chr1 (58 HSPs)
chr1 (215-390)||(39699694-39699868)
chr1 (213-390)||(36613828-36614006)
chr1 (213-386)||(39153041-39153214)
chr1 (213-390)||(45148580-45148756)
chr1 (213-386)||(45149895-45150068)
chr1 (225-389)||(24422800-24422965)
chr1 (213-386)||(39151934-39152107)
chr1 (222-389)||(11436042-11436210)
chr1 (217-389)||(39698563-39698734)
chr1 (213-354)||(44411891-44412032)
chr1 (258-391)||(51684364-51684497)
chr1 (225-405)||(52274952-52275133)
chr1 (218-389)||(11437128-11437300)
chr1 (213-357)||(44404474-44404618)
chr1 (213-389)||(14999285-14999457)
chr1 (213-386)||(50680335-50680508)
chr1 (213-389)||(14999876-15000056)
chr1 (213-386)||(37526802-37526975)
chr1 (455-610)||(20424927-20425083)
chr1 (242-389)||(45157163-45157309)
chr1 (258-395)||(24426045-24426182)
chr1 (222-389)||(35594217-35594383)
chr1 (259-389)||(35066973-35067103)
chr1 (213-386)||(43378637-43378810)
chr1 (213-389)||(36612853-36613029)
chr1 (213-357)||(52276087-52276232)
chr1 (258-390)||(41364828-41364959)
chr1 (226-389)||(52827347-52827511)
chr1 (258-386)||(52828040-52828168)
chr1 (213-390)||(39222397-39222576)
chr1 (222-389)||(35595125-35595294)
chr1 (259-357)||(43058817-43058915)
chr1 (280-389)||(23980458-23980567)
chr1 (258-386)||(7983053-7983180)
chr1 (218-315)||(46525730-46525827)
chr1 (286-375)||(7675457-7675546)
chr1 (213-389)||(12389906-12390082)
chr1 (213-309)||(16281227-16281321)
chr1 (213-389)||(16290093-16290270)
chr1 (260-390)||(50681580-50681706)
chr1 (272-389)||(51685749-51685866)
chr1 (213-367)||(43377742-43377897)
chr1 (240-366)||(40384748-40384874)
chr1 (245-386)||(45156052-45156193)
chr1 (333-389)||(21185208-21185264)
chr1 (213-357)||(33088099-33088243)
chr1 (258-389)||(41366101-41366231)
chr1 (213-320)||(14512547-14512654)
chr1 (222-315)||(46524613-46524706)
chr1 (312-389)||(7674528-7674603)
chr1 (257-310)||(17505040-17505093)
chr1 (280-357)||(33088609-33088686)
chr1 (213-299)||(39221404-39221491)
chr1 (222-268)||(46312185-46312232)
chr1 (340-389)||(11190385-11190434)
chr1 (333-389)||(21945708-21945763)
chr1 (213-276)||(21946523-21946587)
chr1 (226-357)||(43059943-43060075)
[»] scaffold2034 (2 HSPs)
scaffold2034 (213-391)||(231-409)
scaffold2034 (213-368)||(903-1058)
[»] chr7 (35 HSPs)
chr7 (213-389)||(22629483-22629663)
chr7 (213-389)||(7500455-7500631)
chr7 (213-361)||(14999080-14999228)
chr7 (213-389)||(7501776-7501953)
chr7 (213-389)||(11658379-11658556)
chr7 (225-390)||(31659621-31659788)
chr7 (222-390)||(18371423-18371592)
chr7 (213-389)||(769413-769589)
chr7 (252-386)||(11662515-11662649)
chr7 (213-365)||(18372381-18372534)
chr7 (213-389)||(34352711-34352887)
chr7 (226-386)||(42886224-42886384)
chr7 (258-389)||(31949322-31949453)
chr7 (213-357)||(34351524-34351664)
chr7 (258-389)||(3227564-3227695)
chr7 (258-390)||(47525337-47525469)
chr7 (223-321)||(14998048-14998145)
chr7 (284-390)||(48934899-48935005)
chr7 (13-92)||(33131956-33132032)
chr7 (258-389)||(31949772-31949903)
chr7 (258-388)||(3227109-3227238)
chr7 (226-387)||(17781663-17781825)
chr7 (259-389)||(22630423-22630553)
chr7 (213-389)||(47369781-47369958)
chr7 (220-318)||(770693-770791)
chr7 (258-389)||(127337-127466)
chr7 (223-361)||(6618235-6618374)
chr7 (213-387)||(46482599-46482774)
chr7 (258-386)||(128571-128699)
chr7 (293-389)||(17782558-17782654)
chr7 (213-319)||(32253352-32253458)
chr7 (310-394)||(43899443-43899525)
chr7 (97-133)||(33131885-33131921)
chr7 (272-389)||(21505416-21505531)
chr7 (317-389)||(20163585-20163657)
[»] scaffold0320 (1 HSPs)
scaffold0320 (213-389)||(19488-19665)
[»] scaffold0059 (2 HSPs)
scaffold0059 (213-370)||(3694-3851)
scaffold0059 (213-388)||(4655-4829)
[»] scaffold0632 (1 HSPs)
scaffold0632 (213-389)||(3233-3408)
[»] scaffold0019 (2 HSPs)
scaffold0019 (258-388)||(61429-61559)
scaffold0019 (258-390)||(60089-60221)
[»] scaffold0294 (1 HSPs)
scaffold0294 (258-389)||(5408-5539)
[»] scaffold0045 (1 HSPs)
scaffold0045 (313-390)||(49109-49186)
[»] scaffold1303 (1 HSPs)
scaffold1303 (222-389)||(1439-1607)
[»] scaffold0003 (2 HSPs)
scaffold0003 (258-389)||(49403-49534)
scaffold0003 (338-389)||(39344-39395)
[»] scaffold0321 (1 HSPs)
scaffold0321 (222-387)||(18730-18896)
[»] scaffold0049 (1 HSPs)
scaffold0049 (272-389)||(7399-7516)
[»] scaffold0112 (1 HSPs)
scaffold0112 (258-390)||(37147-37278)
[»] scaffold0586 (2 HSPs)
scaffold0586 (213-386)||(6346-6509)
scaffold0586 (259-389)||(8998-9126)
[»] scaffold0186 (1 HSPs)
scaffold0186 (213-390)||(23080-23255)
[»] scaffold0093 (2 HSPs)
scaffold0093 (258-388)||(2435-2564)
scaffold0093 (258-388)||(7058-7187)
[»] scaffold0227 (1 HSPs)
scaffold0227 (306-390)||(137-221)


Alignment Details
Target: chr8 (Bit Score: 177; Significance: 5e-95; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 393 - 612
Target Start/End: Original strand, 8410794 - 8411014
Alignment:
Q  393 tttgtattattatcatcattaaaatcaaccacgtgtcaaaattatatcaaaccactttggtgggatttaaaacctctttggaaacctcgacaatagagga 492  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  8410794 tttgtattattatcatcattaaaatcaatcacgtgtcaaaattatatgaaaccactttagtgggatttaaaacctctttggaaacctcgacattagagga 8410893  T
Q  493 acccaaaccacaccaagatggtggttcttgaatatagtccaagtatgctacg-ggacactccagggaccaacaatgtgcatatcaagaaatttactactt 591  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  8410894 acccaaaccacaccaagatggtggttcttgaatatagtccaaatatgttacgacgacacttcagggaccaacaatgtgcatatcaagaaatttactactt 8410993  T
Q  592 tgttggttttctctttgttcc 612  Q
    |||||| ||||||||||||||    
T  8410994 tgttggatttctctttgttcc 8411014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 214 - 386
Target Start/End: Complemental strand, 11287951 - 11287779
Alignment:
Q  214 taattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 313  Q
    |||||||||||||||||| |||||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  11287951 taattcaataattacacatgtggcatgccgcataggcgttgaccggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggcca 11287852  T
Q  314 aaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||| |||||||  |||||||||||||||||||| ||| ||| ||| | |||| |||||||||    
T  11287851 aaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 12353286 - 12353460
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||  ||||| || |||||||||| |||||||| |||| |||||||    
T  12353286 ttaattaaataattacacacgtggcacgccatgtaagcattgaccggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggcc 12353385  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||||| | |||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  12353386 aaaattatagttt-tgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 12353460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 10007687 - 10007864
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| |||| |    
T  10007687 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggac 10007786  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  10007787 caaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10007864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 18978195 - 18978051
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||| ||||  ||||||    
T  18978195 ttaatttaataattagacacgtggcgtgccacgtaggcattgacccgtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggcc 18978096  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| | |||||||| ||||||||||| ||| ||||    
T  18978095 aaaattgtagtttttgtacttagggggccaaaattgaaagatttt 18978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 12352097 - 12351921
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||| || ||||| || ||||||||||||||||||||   |||||| | |||||||||| | |||||| |||| ||||| |    
T  12352097 ttaattaaataattacacacgtgacacgccacatatgcattgaccggtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttagggggtc 12351998  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| || ||||||||||| ||||| ||| ||||||| || ||||||||||||||||    
T  12351997 aaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcc 12351921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 213 - 388
Target Start/End: Original strand, 18979046 - 18979220
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||| ||||| | || ||||||||||||| ||||||||||  ||||||||||||| ||||||| ||||||| || |  ||||||    
T  18979046 ttaatttaataattacacacatggca-gtcatgtaggcattgacctgtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggcc 18979144  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 388  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| || ||| ||| ||| |||||| |||||||||||    
T  18979145 aaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 210 - 385
Target Start/End: Complemental strand, 45113043 - 45112875
Alignment:
Q  210 aaattaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 309  Q
    ||||||||||||||||||||||||||     ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  45113043 aaattaattcaataattacacacgtg-----ccacgtaggtattgaccagtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttagggg 45112949  T
Q  310 gccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttt 385  Q
     |||||||| || ||| | |||||| ||| | |||||| ||| ||||| ||| || ||||||||||||||||||||    
T  45112948 accaaaattataatttttgtactta-gagactaaaattacaaatttttgaaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 10006521 - 10006343
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||    
T  10006521 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggc 10006422  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || |||||| |||||||||||||    
T  10006421 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcca 10006343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 24123058 - 24122883
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||||||||  ||||||| ||||  |||||||  ||||| |||| |||| |     
T  24123058 ttaatttaataattacacacatgtcgtgccacgtaggcattgaccggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggact 24122959  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||||| | |||||||| || ||||||||||| ||||| ||| || |||| |||||||||||||||||||    
T  24122958 aaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcc 24122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 30335816 - 30335639
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || ||||||| ||||||||||||  | || |||||  ||||||||||||  ||||||| ||||  |||||||||||||| |||| |||||     
T  30335816 ttaattcattatttacacatgtggcatgccacacatgcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggt 30335717  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||||| ||| | |||||||   ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  30335716 taaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 22220556 - 22220387
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  ||||||||  | ||||||||||| ||||||| ||||  |||||| ||||||| |||| |||||||||||||||    
T  22220556 taattacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgt 22220457  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||| ||||| |||| || ||||||||||||| ||| ||| |||  || |||||| |||||||||||||    
T  22220456 agtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcca 22220387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 249 - 386
Target Start/End: Original strand, 29968298 - 29968434
Alignment:
Q  249 gcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattg 348  Q
    ||||||||||||||||||||   |||| ||| ||| |||||| |||||||| |||| |||| ||| ||||||||||| | |||||||| |||||||||||    
T  29968298 gcattgaccggtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattg 29968397  T
Q  349 caagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| ||||||| |||||| |||||||||    
T  29968398 caagtttttaaaagttaaggg-ggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 18971085 - 18970942
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||| ||||| | || ||||||||||||||||||||||||  |||||||| |||| ||||||||||| ||| ||||  |||| |    
T  18971085 ttaatttaataattacacacatggca-gtcatgtaggcattgaccggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtc 18970987  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| | |||||||| ||||||||||| ||| ||||    
T  18970986 aaaattgtagtttttgtacttagggggccaaaattgaaagatttt 18970942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 22221297 - 22221465
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||||||||||| |||  || || ||||||  ||||||||||   ||||||||||||  || ||||||||||| |||| ||||| |||||||||    
T  22221297 taattacacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgt 22221396  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  22221397 agttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 22227639 - 22227807
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||||||||||| |||  || || ||||||  ||||||||||   ||||||||||||  || ||||||||||| |||| ||||| |||||||||    
T  22227639 taattacacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgt 22227738  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  22227739 agttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22227807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 218 - 389
Target Start/End: Original strand, 42982584 - 42982758
Alignment:
Q  218 tcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg---ataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    ||||||||||||||||| || | |||| ||||| |||||||||||||||||   | ||||| ||||||||||| ||| ||||||||||||| |||| |||    
T  42982584 tcaataattacacacgtagcgtaccacataggctttgaccggtcaaaattggcaaaaaaaatgatcaaaattgtaaatgggctaattcttgaggggtcaa 42982683  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||| | |    ||| |||||||||| ||| ||||||||| |||| || |||||| ||||||||||||    
T  42982684 aattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcc 42982758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 24123827 - 24123967
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||| |||||||    |||| |||||||||||||||  ||||||| ||||  |||||||||||||| |||| || |||     
T  24123827 ttaatttaataattacacacgtggcgtgccacg----cattaaccggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggct 24123922  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||| |||   |||||| ||||||||||||||||||||||    
T  24123923 aaaattgtaattttagtacttaagaggccaaaattgcaagttttt 24123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 213 - 362
Target Start/End: Original strand, 18488187 - 18488336
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||| || | ||||||| ||||  |||||||||| ||  |||| | |||||    
T  18488187 ttaattcaataattacacatttggcatgccacgtaggcattgactggtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggcc 18488286  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaa 362  Q
    ||||||||||||| | ||  |||| | | |||||||||| ||||| ||||    
T  18488287 aaaattgtagtttttgtatataggggactaaaattgcaacttttttaaaa 18488336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 45114438 - 45114617
Alignment:
Q  210 aaattaattc-aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggg 308  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |  |||| ||| ||| |||||| | || ||| ||||  |     
T  45114438 aaattaattccaataattacacacgtggtgtgccacgtaggcattgaccggtcaaaattaaccaaaatgattaaagttgcaatgaggttaaatctt-aga 45114536  T
Q  309 ggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||||||| | ||| |||    |||||||||||||||||| ||| ||| ||| |||||| ||||||| ||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcc 45114617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 1824011 - 1824174
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| ||||| | |||||||||| ||||    |||||||||||  ||||||| ||||  ||||||  |||||| |||| |||||||||||||||    
T  1824011 taattacacatgtggcctaccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgt 1824110  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactt 384  Q
    ||||| | |||||||| | |||||||||||||||||| ||| |||  || ||||||||||||||    
T  1824111 agtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 1858456 - 1858619
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| ||||| | |||||||||| ||||    |||||||||||  ||||||| ||||  ||||||  |||||| |||| |||||||||||||||    
T  1858456 taattacacatgtggcctaccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgt 1858555  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactt 384  Q
    ||||| | |||||||| | |||||||||||||||||| ||| |||  || ||||||||||||||    
T  1858556 agtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 259 - 386
Target Start/End: Complemental strand, 11282138 - 11282011
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||| |||| ||||||||||||||||||| ||| |||| ||||| |||||||||  ||| | ||  |||| |||||||||||||| ||||||    
T  11282138 gtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaacttttta 11282039  T
Q  359 aaaattaagggaggaaaaatgcacttta 386  Q
    ||| ||||||| | |||| |||||||||    
T  11282038 aaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 259 - 389
Target Start/End: Complemental strand, 5514111 - 5513982
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||| ||||||| ||||  |||||||||||||| | || ||||| |||||||||||||| | |||||||| ||||||||||| ||||||||     
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttg 5514012  T
Q  359 aaaattaagggaggaaaaatgcactttagcc 389  Q
    ||| || |||| | |||| ||||||||||||    
T  5514011 aaagtt-agggggtaaaagtgcactttagcc 5513982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 11283180 - 11283310
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||  |||| ||||||||||||||||||||||| | || |||| ||||||||||  ||| ||||| |||| ||| |||||| ||| |||||     
T  11283180 gtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttg 11283279  T
Q  359 aaaattaagggaggaaaaatgcactttagcc 389  Q
    ||| ||||||| || ||||||||||||||||    
T  11283280 aaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 30570181 - 30570286
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||| |||||||||| ||||||| |||||||||||   ||||||| ||||  |||||| ||||||| |||| |||||||    
T  30570181 ttaattaaataattacacacgtggcgtgccacgtagacattgactggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggcc 30570280  T
Q  313 aaaatt 318  Q
    ||||||    
T  30570281 aaaatt 30570286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 39889321 - 39889410
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaagcaccttgatgagt 105  Q
    |||| ||||||||||||| |||||||||||||||||||||||   |||||||||||| || ||||||||||||||||||| | ||||| ||||    
T  39889321 tgagttgaagatgatgaagattcatgagtttgggtttgaatg---gaagaagaagaatcttgaggagtatgaagaagaagaatcttgaggagt 39889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 28978009 - 28977933
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaag 92  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||    
T  28978009 tgagttgaagatgatgaagattcatgagtttgggtttgaatggaagaaga---agaatcttgaggagtatgaagaagaag 28977933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 228 - 387
Target Start/End: Complemental strand, 43661427 - 43661267
Alignment:
Q  228 cacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttc 326  Q
    ||||||||||||||||| || || |||||  ||||||| ||||  ||||| | ||||  |||||||||||||| |||| ||||||||||||| ||||||     
T  43661427 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttt 43661328  T
Q  327 tatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 387  Q
    | ||| || | | ||||||||| || ||||| |||||||||||  ||||| ||||||||||    
T  43661327 tgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 1823660 - 1823552
Alignment:
Q  281 aaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgc 380  Q
    |||| |||||| ||||||| |||| |||| || |||||||||||| | |||||||  || ||||||||||||||||||||| ||||||| | |||| | |    
T  1823660 aaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtac 1823561  T
Q  381 actttagcc 389  Q
    |||||||||    
T  1823560 actttagcc 1823552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 1858105 - 1857997
Alignment:
Q  281 aaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgc 380  Q
    |||| |||||| ||||||| |||| |||| || |||||||||||| | |||||||  || ||||||||||||||||||||| ||||||| | |||| | |    
T  1858105 aaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtac 1858006  T
Q  381 actttagcc 389  Q
    |||||||||    
T  1858005 actttagcc 1857997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 8388593 - 8388464
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||   ||||||| |||||  ||||||||||||| |||| ||||||||||||| |||||| | ||| |||| ||| |||||||||| |||||    
T  8388593 ggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaacttttt 8388494  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| |||  || || ||| ||||||||||||    
T  8388493 aaaagtta--ggggggaaagtgcactttagcc 8388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 30569062 - 30568950
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||| ||||||||| |||||||||| ||||||| ||||| |||||   ||||||| ||||  |||||||||||||| |||| ||||  |    
T  30569062 ttaattaaataattatacacgtggcgtgccacgtagacattgactggtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatc 30568963  T
Q  313 aaaattgtagttt 325  Q
    |||||| ||||||    
T  30568962 aaaattatagttt 30568950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 36249718 - 36249550
Alignment:
Q  223 aattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtag 322  Q
    ||||| ||| ||||||||||||  | |||||||| |||||||||||   |||||||| || ||||||||||| ||||  | |  |||   ||| ||||      
T  36249718 aattatacatgtggcatgccacacatgcattgactggtcaaaattggacaaaaggattaatattgcaaagggcctaaaacataagggattaaatttgtca 36249619  T
Q  323 tttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccat 391  Q
    ||| ||| | ||||||||||||||||||| ||||| ||| ||||||| |||||| ||||||||||||||    
T  36249618 tttttattcataggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagccat 36249550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 30336427 - 30336602
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 313  Q
    |||||| || ||||| ||||||||||||||  | ||||||||  ||||||||||||  ||||||| ||||  ||||||  |||||| |||| | |||  |    
T  30336427 aattcattatttacatacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggtta 30336526  T
Q  314 aaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||| | |||||||||||| ||||||  |||||||| ||| ||| ||| | | || ||||||||||||    
T  30336527 aaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 43661747 - 43661924
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || ||||||| ||||||||||||  | || |||||  ||||||||||||| ||||||| ||||  |||||  |||| || |||| ||||||    
T  43661747 ttaattcattatttacacatgtggcatgccacacatgcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggc 43661846  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||| |||||| | ||| |||  |   |||||||||| ||||| ||| ||||||| |||||| ||||||| ||||    
T  43661847 caaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcc 43661924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 8389659 - 8389787
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| ||||| || ||||||| ||| |||| |||| | ||||||||||||| | ||| || | | |||||||||||| |||||    
T  8389659 ggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaacttttt 8389758  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     ||| ||||| | |||||| |||||||||    
T  8389759 gaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 17844450 - 17844395
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg 268  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||    
T  17844450 ttaattcaataattacacacgtgacgtgccatgtaggcattgaccgatcaaaattg 17844395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 387
Target Start/End: Complemental strand, 29043536 - 29043400
Alignment:
Q  251 attgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgca 350  Q
    |||||| |||||||||||   ||||||||||||  | |||||||||||| |||| | |||  ||||||||||||| | ||| |||| || |||||| ||     
T  29043536 attgactggtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcg 29043437  T
Q  351 agtttttaaaaattaagggaggaaaaatgcactttag 387  Q
    | ||||| ||  |||||||||||||| || |||||||    
T  29043436 actttttgaaggttaagggaggaaaagtgaactttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 332 - 390
Target Start/End: Complemental strand, 24483200 - 24483142
Alignment:
Q  332 ttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||| |||||||||||||||||||| ||||||| | | |||||| |||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcca 24483142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 5514294 - 5514370
Alignment:
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | || |||| |||| |||||||||||||||| ||||||| ||||  |||| ||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattagggga-taaaagtgcactttagcc 5514370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 28977901 - 28977860
Alignment:
Q  97 ttgatgagtgattttaattggatgatttgattttaaagattt 138  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  28977901 ttgatgaatgattttaattggatgatttgattttaaaaattt 28977860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 32207309 - 32207394
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||| ||||  ||||||| |||||| ||||  | ||||||||||||||||| | ||||||||  | |||||||||||||||||    
T  32207309 aaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagttttt 32207394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 389
Target Start/End: Complemental strand, 32968586 - 32968456
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||| | |||||||   ||| ||||||||||||||  | | | ||||||||||||| ||||  |||| | || ||||||||| ||||  ||||     
T  32968586 gtcaaaattgctcaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttg 32968487  T
Q  359 aaaattaagggaggaaaaatgcactttagcc 389  Q
    ||| ||| ||| |||||| ||||||||||||    
T  32968486 aaagttagggggggaaaagtgcactttagcc 32968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 635 - 668
Target Start/End: Original strand, 8411001 - 8411034
Alignment:
Q  635 tttctctttgttcctcagtcgtcgaggtatgaac 668  Q
    |||||||||||||||| |||||||||||||||||    
T  8411001 tttctctttgttcctcggtcgtcgaggtatgaac 8411034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 24488664 - 24488748
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||| ||| ||| |||||| |||||||| ||||  ||||| |||||||| ||||  ||| ||||| ||||||||||||||||||||    
T  24488664 aaaatgatgaaatttgcaatggggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagttttt 24488748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 3819539 - 3819488
Alignment:
Q  338 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||||  |||| ||| ||||||| ||||||||||||||||||||    
T  3819539 ggccaaaattgcaacattttgaaacttaaggg-ggaaaaatgcactttagcca 3819488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 11288831 - 11288875
Alignment:
Q  221 ataattacacacgtggcatgccacgtaggcattgaccggtcaaaa 265  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  11288831 ataattacacacgtgacgtgccacgtaaacattgaccggtcaaaa 11288875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 11456694 - 11456638
Alignment:
Q  333 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| |||||||||||||| ||||| ||||||| |||  ||||| ||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 38974878 - 38974794
Alignment:
Q  306 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||| ||| ||| ||| |||||| |||||||||||||    
T  38974878 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcca 38974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 39005976 - 39005892
Alignment:
Q  306 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||| ||| ||| ||| |||||| |||||||||||||    
T  39005976 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcca 39005892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 132; Significance: 3e-68; HSPs: 3)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 17649 - 17470
Alignment:
Q  210 aaattaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 309  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||||    
T  17649 aaattaattcaataattacactcgtggcatgccacgtaggcattgaccggtcaaaattggtaaaaaagatcgaaattgcaaaggggataattcttggggg 17550  T
Q  310 gccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||| | |||| ||||||||||||    
T  17549 gccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcc 17470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 17848 - 17720
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaagcaccttgatgagtgatttta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  17848 tgagaagaagatgatgaatattcatgagtttgggtttgaatggaagaagaagacgaacctggaggagtatgaagaagaagcatcttgatgaatgatttta 17749  T
Q  113 attggatgatttgattttaaagatttcga 141  Q
    || ||||||||||||||||||||||||||    
T  17748 atcggatgatttgattttaaagatttcga 17720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 213 - 391
Target Start/End: Original strand, 18701 - 18879
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||  |||| ||| ||| |||||| |||||||| | ||  ||||||    
T  18701 ttaattcaataattacacaagtggtgtgccacgtaggcattgaccggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggcc 18800  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccat 391  Q
    |||||| |||||| | ||| |||| | |||||||||||| ||||||||| ||| | | | |||| ||||||||||||||    
T  18801 aaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagccat 18879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 2e-66; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 36449954 - 36449778
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |    
T  36449954 ttaattcaataattacacacatggcatgccacgtaggcattgaccggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggc 36449855  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  36449854 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 215 - 386
Target Start/End: Complemental strand, 7898865 - 7898694
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||| |||||||| |||| |||||||||    
T  7898865 aatttaataattacacacgtggcatgccacgtaagcattgactggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaa 7898766  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||  ||||| |||||||||    
T  7898765 aattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 36450846 - 36451018
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||   |||||||||||||||||||||| ||||||||||||||||||    
T  36450846 ttaattcaataattacatacgtggtatgccacgtaggcattgaccagtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggcc 36450945  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
     |||||||||||||| |||||||| | |||||||||||||||||| ||| ||||||| |||||| |||||||||    
T  36450946 gaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 38840418 - 38840594
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||| ||||||     
T  38840418 ttaattaaataattacacacgtggcacgccgcgtaggcattgaccggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggct 38840517  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| ||| |||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  38840518 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 38840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 38839418 - 38839242
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||||  |||| ||| |||||||||| |||||||| |||| |||||||    
T  38839418 ttaattaaataattacacaagtggcacgccacgtaagcattgacgggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggcc 38839319  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | || ||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||||||    
T  38839318 aaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcc 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 220 - 389
Target Start/End: Original strand, 7899814 - 7899983
Alignment:
Q  220 aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 319  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||  |||| ||| ||| || ||| |||||||| |||| |||||| |||||||    
T  7899814 aataattacacacgtggcgtgccacgtatgcattgaccggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattg 7899913  T
Q  320 tagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||| |||||||| | |||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  7899914 tagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 41879137 - 41879313
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||| |||||||||| || ||||| | || |||||      
T  41879137 ttaattaaataattacacacgtggcacgccacgtaggcattgactggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggtt 41879236  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||| | |||| || |||||||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcc 41879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 13570482 - 13570658
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||| |||||||| |||||| |||| |||||||| |||||||||  ||||||||||||| ||| |||||| |||||||||||||| ||    
T  13570482 ttaattaaataattacgcacgtggcgtgccacataggaattgaccgctcaaaattggcaaaaaggatcaaagttgtaaagggactaattcttgggggacc 13570581  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||||| | |||||| | | | |||||||||||||||| ||| ||| |||  ||||||||||||||||||    
T  13570582 aaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcc 13570658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 22587879 - 22588054
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||| ||||||||||||||||||| ||| | ||||| |||| ||||||   ||||||| ||||  |||||||||||||| ||||  ||||||    
T  22587879 ttaattaaataaatacacacgtggcatgccacatagacgttgactggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggcc 22587978  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | ||| |||| |||||||||||||||||||| ||| ||| | | |||||||||||||||||||    
T  22587979 aaaattgtagtttttgtacatagg-ggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcc 22588054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 41878264 - 41878091
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||     |||||||| ||||||||||||||||||||  |||| ||| |||||||||| |||||||| ||||  ||||||    
T  41878264 ttaattaaataattacacacgtg-----ccacgtag-cattgaccggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggcc 41878171  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgca---agtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||||| |||||||| |||||||||||||   ||||||| ||| ||||||| || ||| |||||||||||||    
T  41878170 aaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggg-gggaaagtgcactttagcca 41878091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 225 - 389
Target Start/End: Complemental strand, 11257786 - 11257622
Alignment:
Q  225 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 323  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||| |||||||||||| |||||| |||||||| |||| || |||||||||||||||    
T  11257786 ttacacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagt 11257687  T
Q  324 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    || |||||||||| |   |||||||||||||||| ||| |||  |||| |||| ||||||||||||    
T  11257686 ttttatacttagg-gtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcc 11257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 22848368 - 22848191
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||| ||||||| ||||  |||||||||||||| |||| ||| ||    
T  22848368 ttaattaattaattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagc 22848269  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | || ||||| | |||||||||||||||||| ||| ||| ||| | |||| ||||||||||||    
T  22848268 caaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 22848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 18299504 - 18299372
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  ||||||||||||  |||||| ||||||| || | |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  18299504 ggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagttttt 18299405  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
     ||| ||| ||| |||||| |||||||||||||    
T  18299404 gaaagttacgggtggaaaagtgcactttagcca 18299372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 22587676 - 22587564
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||||||||| |||||||||||| |||||||||||   ||||||| ||||  ||||||| |||||| |||| |||||||    
T  22587676 ttaattaaataattacacacgtggcatgccatgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggcc 22587577  T
Q  313 aaaattgtagttt 325  Q
    |||||||||||||    
T  22587576 aaaattgtagttt 22587564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 11938760 - 11938889
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    ||||||||||  ||||| ||||||||||||||| | |||||||||| ||||| ||||||| || ||| | |||||||||| ||||||||||||||||||     
T  11938760 gtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaaaattatatttt-tgtacttaggagaccaaaattgcaagtttttg 11938858  T
Q  359 aaaattaagggaggaaaaatgcactttagcc 389  Q
    ||| ||| ||| |||||| ||||||||||||    
T  11938859 aaagttaggggtggaaaagtgcactttagcc 11938889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 11258735 - 11258912
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || || ||| |||||||||||| | | || |||||  ||||||||||||  ||||||||||||  ||||| |||||||| |||| |||| |    
T  11258735 ttaattcattatttgcacgcgtggcatgccatgcaagcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggac 11258834  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  |  || ||||||||||||||||    
T  11258835 taaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcactttagcc 11258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 23869519 - 23869635
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||||||||  |||||||||||||| |||| ||| || ||||||||||||| | || ||||| |||||||||||||||||||| ||| ||||||| |    
T  23869519 aaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtg 23869617  T
Q  372 gaaaaatgcactttagcc 389  Q
    ||||| ||||||||||||    
T  23869618 gaaaagtgcactttagcc 23869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 8534758 - 8534586
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||||||||||||||||| || |||||  ||||| ||||||  |||||||||||   ||||||  |  ||||||||| |||||||||||||||  |    
T  8534758 ttaattcaataattacacacgtagcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgcaaagaggctaattcttgggga-c 8534660  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||||||||||||   |  |||||||| |||||||| ||||||||||| ||||||  ||||||||    
T  8534659 caaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaaggg-ggaaaagagcacttta 8534586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 26544325 - 26544152
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || ||||||||| |||||||||| || || |||||  ||||||||||||| ||||||| ||||  |||||||| ||||| |||| || |||    
T  26544325 ttaattcattatttacacacgcggcatgccacatatgcgttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggc 26544226  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
     |||| |||||||| | |||||||||  ||||||||| || ||||||||||||| |||  ||||| |||||||||    
T  26544225 taaaactgtagtttttgtacttagga-accaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 16446330 - 16446154
Alignment:
Q  213 ttaattcaataa-ttacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||||||| ||||||||||||| |||||  |||||||||||  || ||||||||   ||||||  |  |||||||| ||| ||||||||||||       
T  16446330 ttaattcaataaattacacacgtggc-tgccatataggcattgacgagttaaaattgaactaaaggactactattgcaaatgggttaattcttggggtat 16446232  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | || ||| ||||  |||||||||||||||| ||| |||||||  ||||||||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcc 16446154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 222 - 389
Target Start/End: Complemental strand, 18797415 - 18797246
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  || || ||||||  ||||||||||   ||||||| ||||  |||||||||||||| | || ||||| |||||||||    
T  18797415 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgt 18797316  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 389  Q
    |||||  ||||||| | || ||||||||||||||||| ||| |||  ||| |||||| ||||||||||||    
T  18797315 agttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcc 18797246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 18904484 - 18904367
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| ||||  || |||||||||||||||| |||  ||||||||||||||| | |||||| | ||||||||||||| |||||| ||| ||||||| |    
T  18904484 aaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggg 18904385  T
Q  372 gaaaaatgcactttagcc 389  Q
    ||||| ||||||||||||    
T  18904384 gaaaagtgcactttagcc 18904367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 802516 - 802691
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||| || |||||||| |||| |||||| | ||||||||||   |||||| ||||  ||||||||||  || |||| | ||| |    
T  802516 ttaatttaataattacacacatgacatgccacctaggtattgactgctcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtc 802615  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||  ||| |||||||||||||||||||| ||| || |||| |||||| | ||||||||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcc 802691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 810706 - 810850
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||| || |||||||| |||| |||||| | |||||||||||  |||||| ||||  ||||||||||  || |||| | ||| |    
T  810706 ttaatttaataattacacacatgacatgccacctaggtattgactgctcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtc 810805  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| | |||  ||| ||||||||||||||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 18905912 - 18906088
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||  |||||||||||| ||||    |||||||||||| |||| || ||||  |||||| | ||||| |||| |||| |    
T  18905912 ttaattaattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttagggg-c 18906010  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||||||||| | |||||||| ||| |||||||||||||||| ||| |||   | |||||| ||||||||||||    
T  18906011 taaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcc 18906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 8535652 - 8535752
Alignment:
Q  284 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 383  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||   |  ||||||| ||||||||||||| |||  ||||||||| || |||    
T  8535652 attgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtact 8535749  T
Q  384 tta 386  Q
    |||    
T  8535750 tta 8535752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 8972648 - 8972574
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 90  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||||||   ||||| |||||||||||| ||||||    
T  8972648 tgagttgaagatgatgaagattcatgagtttgggtttgaatgaaagaaga---agaacatggaggagtatgtagaaga 8972574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 13568148 - 13568004
Alignment:
Q  213 ttaattcaat-aattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggggg 310  Q
    |||||||||| ||||||||||||||| |||||  ||||| ||||||| |||||||||||   ||| ||  |  |||||||||||||||||| |||||       
T  13568148 ttaattcaatgaattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacctaaatgactactattgcaaaggggctaatttttgggat- 13568050  T
Q  311 ccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
     |||||||||||||| | || ||||| ||||||||||||||||||||    
T  13568049 -caaaattgtagtttttgtatttagggggccaaaattgcaagttttt 13568004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 24475355 - 24475241
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  ||||||| ||||  |||||| | ||||| |  | |||||||||||||||||||| |||||||||| ||| |||||| |||||||||    
T  24475355 ggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagttttt 24475256  T
Q  358 aaaaattaagggagg 372  Q
     ||| ||| ||||||    
T  24475255 gaaagttaggggagg 24475241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 28618098 - 28617926
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||  |||||||||||||||||    |||||||| ||  ||||  | ||||  |||||||||||||| |||| ||||||    
T  28618098 ttaattaattaattacacacgtggtctgccacgtaggcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttagggggc 28617999  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
     ||||||| ||||| | ||||| || ||||||||||||||| |||| ||| || |||||| ||||||| ||||||    
T  28617998 -aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtt-agggagaaaaaatgtacttta 28617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 18869001 - 18868924
Alignment:
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | || |||||||||||||||||||||||||| ||| ||| ||| |||||| | ||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 18868924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 222 - 388
Target Start/End: Complemental strand, 13030457 - 13030293
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| ||||| |||||||||||| ||||    |||||||||||  |||| || ||||  |||||| | ||||| |||| |||||| ||||||||    
T  13030457 taattacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgt 13030358  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 388  Q
    | ||| | |||||||| |||||||||| ||||||||| ||| |||  || |||||| |||||||||||    
T  13030357 aatttttgtacttagg-ggccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 32739706 - 32739623
Alignment:
Q  306 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||||||||| | ||| || | |||||||||||||||||||| ||| ||| ||||  |||||| ||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaaaaatacactttagcc 32739623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 35780176 - 35780107
Alignment:
Q  18 tgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 90  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||   ||||| |||||||||||| ||||||    
T  35780176 tgaagatgatgaagaatcatgaatttgggtttgaatggaagaaga---agaacatggaggagtatgtagaaga 35780107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 26545445 - 26545590
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || |||||||||||||||||||| || || ||||   ||||||||||||| |||| || ||||  |||||||||||||| |||| | |||     
T  26545445 ttaattcattatttacacacgtggcatgccacatatgcgttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggt 26545544  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||| || ||| | || ||| | || ||||||||||| |||||    
T  26545545 caaaattataatttttgtatttaaggggtcaaaattgcaaattttt 26545590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 20440113 - 20440180
Alignment:
Q  20 aagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 90  Q
    ||||||||||| | |||||| ||||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  20440113 aagatgatgaagaatcatgaatttgggtttgaatg---gaagaagaagaacatggaggagtatgtagaaga 20440180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 20445718 - 20445785
Alignment:
Q  20 aagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 90  Q
    ||||||||||| | |||||| ||||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  20445718 aagatgatgaagaatcatgaatttgggtttgaatg---gaagaagaagaacatggaggagtatgtagaaga 20445785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 27553701 - 27553788
Alignment:
Q  224 attacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||||||  |||||| || | |||||||||||||||| |||| ||||||    
T  27553701 attacatacgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagg-tcgatattgcaaaggggctaaatcttagggggc 27553788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 32739827 - 32739715
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||   ||| ||| ||||  || |||  | |||| ||||  ||||||    
T  32739827 ttaattcaataattacacacgtggtgtgcgatgtaggcgttgaccggtcaaaattggccaaatggaccaaagatggaaaatgactaaatcttaaggggcc 32739728  T
Q  313 aaaattgtagttt 325  Q
    |||||||||||||    
T  32739727 aaaattgtagttt 32739715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 1034475 - 1034570
Alignment:
Q  294 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||| ||||| | ||||||| ||||   ||| |||| ||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 349
Target Start/End: Original strand, 18869086 - 18869224
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaag-gggctaattcttgggggg 310  Q
    |||||| | |||||||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||  ||||||  ||||||| |||| ||||     
T  18869086 ttaattaattaattacacacgtggcctgccacataggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttagggga 18869185  T
Q  311 ccaaaattgtagtttctatacttaggaggccaaaattgc 349  Q
      ||||||||||||| | ||||||| |||||||||||||    
T  18869186 taaaaattgtagtttttgtacttagaaggccaaaattgc 18869224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 24476863 - 24476917
Alignment:
Q  307 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaa 361  Q
    |||| |||||||||||||| | |||||||| | |||||||| |||||||||||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaa 24476917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 307 - 355
Target Start/End: Original strand, 18300743 - 18300791
Alignment:
Q  307 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttt 355  Q
    |||| |||||||||||||| | |||||||| || |||||||||||||||    
T  18300743 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttt 18300791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 26829333 - 26829389
Alignment:
Q  333 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| ||||||||| ||||  |||||||| |||||||| ||||| ||||||||||||    
T  26829333 tagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcc 26829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 54540715 - 54540891
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||    
T  54540715 ttaattcattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggcc 54540814  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||| | || ||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  54540815 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 54540891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 215 - 386
Target Start/End: Original strand, 7268754 - 7268924
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||| |||| |||| || ||||||    
T  7268754 aatttaataattacacacgtggcgtgccacgtaagcattgaccggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaa 7268853  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||| |||||||||    
T  7268854 aattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 22776737 - 22776913
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||  ||||||||||||||||||| |||||||    
T  22776737 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggcc 22776836  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | ||| |||| |||||||||||||| ||| | ||| ||| ||| |||||| ||||||||||||    
T  22776837 aaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcc 22776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 215 - 386
Target Start/End: Complemental strand, 7267817 - 7267647
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||  |||||||| ||| |||||| | |||||| |||| |||||||||    
T  7267817 aatttaataattacacacgtggcgtgccatgtatgcattgaccggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaa 7267718  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||| |||||||||    
T  7267717 aattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 55191920 - 55192095
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| ||||  ||||| |||| |||| |||| |||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||    
T  55191920 ttaattcaataattacacatgtggtgtgccatgtagacattaaccgatcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggcc 55192019  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||  |||||||||||||||||||| ||| ||||||| || ||||| ||||||||||    
T  55192020 aaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggg-gggaaaatacactttagcc 55192095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 19985025 - 19984849
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| ||||   ||| |    
T  19985025 ttaatttaataattacacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtc 19984926  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | ||| |||| |||||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 54539931 - 54539755
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| |||||||||||||||||||||||||| || |||||| ||||||||||  ||||||||||||| ||||||| | ||||| |||| ||||  |    
T  54539931 ttaattcattaattacacacgtggcatgccacgtatgctttgaccagtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatc 54539832  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | || ||||| ||  |||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  54539831 aaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcc 54539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 19985995 - 19986173
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| || ||||  |||||||||| ||| |||| | ||| |    
T  19985995 ttaatttaataattacacacgtggcatgccacgtaggcattgactggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtc 19986094  T
Q  313 aaaattgtagtttctatacttagga--ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| ||||| |||||  |||||||||||||||||||| ||| ||||| | |||||| ||||||||||||    
T  19986095 aaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 22775922 - 22775816
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||    
T  22775922 ttaattcaataattacacacgtaacatgccacgtaggcattgaccggtcaaaattgggaaaaaggaccaaatctgcaaaggggctaattcttggggggcc 22775823  T
Q  313 aaaattg 319  Q
    |||||||    
T  22775822 aaaattg 22775816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 225 - 388
Target Start/End: Complemental strand, 8456642 - 8456479
Alignment:
Q  225 ttacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 323  Q
    ||||||||||||||||||||| |||| |||||  ||||||||||||  |||||||||||| |||||| | |||||| |||| ||||||||||||||||||    
T  8456642 ttacacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagt 8456543  T
Q  324 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 388  Q
    || | || ||||| | |||||||||||||||||| |||||| |||| | |||| |||||||||||    
T  8456542 ttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 213 - 365
Target Start/End: Original strand, 34940112 - 34940264
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| | ||||||||||| ||||| || ||||  | |||| ||||||||| || | || ||    
T  34940112 ttaattcaataattacacatgtggcatgctacgtaggcattgatcagtcaaaattgagaaaaaagaccaaatatacaaatgggctaattattagaggacc 34940211  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta 365  Q
    ||||||||| ||| ||||| || |||   ||||||||||||||||||||||||    
T  34940212 aaaattgtaatttttatacataagagattaaaattgcaagtttttaaaaatta 34940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 51038723 - 51038891
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  || ||||| |||||||||||| ||||||||| ||  ||||||||||||  |||||||  ||| ||||||||||    
T  51038723 taattacacacgtggcatgccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattcttaagggaccaaaattgt 51038822  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||| | | | |||| || ||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  51038823 agtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcc 51038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 223 - 389
Target Start/End: Complemental strand, 7758569 - 7758402
Alignment:
Q  223 aattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgta 321  Q
    ||||| |||||||||||||||| || || |||||  ||||||||||||  ||||||| ||||  | |||||||| ||| |||| |||||| |||||||||    
T  7758569 aattatacacgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgta 7758470  T
Q  322 gtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| | |||||||| || ||||||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  7758469 gtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 7758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 29931403 - 29931226
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || |||||||||||| ||||||   |||| ||||| | |||||||||||  |||||||  |  |||||||||||| ||| |||| ||||||    
T  29931403 ttaattcattatttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggc 29931304  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | || ||||| ||| |||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  29931303 caaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29931226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 29980557 - 29980380
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || |||||||||||| ||||||   |||| ||||| | |||||||||||  |||||||  |  |||||||||||| ||| |||| ||||||    
T  29980557 ttaattcattatttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggc 29980458  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | || ||||| ||| |||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  29980457 caaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 49216423 - 49216246
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||| |||||||||||| |||||| ||||||||||||   |||| |||||||  |||||| | ||||| ||||  |||| |    
T  49216423 ttaattaaataattacacacgtgacatgccacgtagacattgatcggtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggac 49216324  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    | ||||||||||| | ||| |||| || ||||||||||| ||||| ||| ||| | | |||||| |||||||||||||    
T  49216323 ataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcca 49216246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 53614995 - 53614819
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||||||||||| | |||||  ||||| |||| || ||||||||||| | ||||||     |||||||| ||||||||||||||||| |    
T  53614995 ttaatttaataattacacacgtgacctgccatataggcgttgatcgagtcaaaattgacataaaggactgctattgcaaatgggctaattcttggggg-c 53614897  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| ||||  |||  | | ||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  53614896 caaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcc 53614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 10457716 - 10457604
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||| ||||  | ||||  | ||||||| | |||||||    
T  10457716 ttaattcaataattacacacgtggaatgccacgtaggcattgaccagtcaaaattgggaaaaaggaccaaatatacaaatagactaattcctagggggcc 10457617  T
Q  313 aaaattgtagttt 325  Q
    |||||||||||||    
T  10457616 aaaattgtagttt 10457604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 46720070 - 46719939
Alignment:
Q  260 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaa 359  Q
    ||||||||||  ||||||| ||||  |||||| ||||||| |||| | || | ||||||||||||| ||||| |||| ||||||||| |||| |||||||    
T  46720070 tcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaa 46719971  T
Q  360 aaattaagggaggaaaaatgcactttagccat 391  Q
    || ||||||| |||||||||||||||||||||    
T  46719970 aagttaaggggggaaaaatgcactttagccat 46719939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 47614362 - 47614184
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    ||||||||| |  ||||| | ||||  ||||||| |||||| |||| ||||||    
T  47614362 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggc 47614263  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || | |||| |||||||||||||    
T  47614262 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcca 47614184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 217 - 386
Target Start/End: Complemental strand, 49398298 - 49398130
Alignment:
Q  217 ttcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 316  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||| | ||||| ||||  | ||||||||    
T  49398298 ttcagtaattacacacatggcgtgccacgtaggcattgaccggtcaacattggtaaaaaggatcaaagttgcaaatgagctaaatcttaagaggccaaaa 49398199  T
Q  317 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||| ||| | | | ||| |  |||||||   || ||||||||| ||||||| |||||| |||||||||    
T  49398198 ttgtaatttttgttcatagaacaccaaaataataattttttaaaacttaaggg-ggaaaagtgcacttta 49398130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 51037703 - 51037535
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  |  ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||||| |||||| ||||||||    
T  51037703 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgttaaaaaggaccactactgcaaaggggctaattcttagggggctaaaattgt 51037604  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||| | | | |||  || ||||||||||| ||||| ||| |||||||| ||||| |||||||||||||    
T  51037603 agtttttgttcatagagggtcaaaattgcaactttttgaaagttaaggga-gaaaagtgcactttagcca 51037535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 51470103 - 51469971
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| |||||   ||||||| ||||   |||||||| ||||||||||||||||||||    
T  51470103 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagttttt 51470004  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
     ||||||| ||  |||||| |||||||||||||    
T  51470003 gaaaattagggagggaaaagtgcactttagcca 51469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 12700350 - 12700175
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||| | |||||| || | |||||     
T  12700350 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggt 12700251  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  || || ||| ||||||||||||    
T  12700250 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcc 12700175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 213 - 366
Target Start/End: Complemental strand, 4271616 - 4271463
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||| ||||| || ||  ||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||  |  ||     
T  4271616 ttaatttaataattacacatgtggcgtgtcatatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgct 4271517  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaa 366  Q
    ||||||||||||| |||| ||| |||  ||||||| ||| ||||| ||| ||||    
T  4271516 aaaattgtagtttttatatttaagagatcaaaattacaaatttttgaaagttaa 4271463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 55191684 - 55191544
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||| |||||||||||||||||| | || | ||||| ||||| | |||||| ||||||||||||||||||||||||||||||||| ||||| | ||  ||    
T  55191684 aatttaataattacacacgtggcgtaccgcataggctttgactgatcaaaagtgataaaaaggatcaaaattgcaaaggggctaaatcttgagagg-gaa 55191586  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttt 356  Q
    |||| |||||| | || |||||  | ||||||||||||||||    
T  55191585 aattatagtttttgtatttagggtgtcaaaattgcaagtttt 55191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 31645149 - 31645005
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||| ||||||||| |||| ||| ||| | ||||||||||||||||| | ||||||| ||||  |||||| ||||||| |||| || ||      
T  31645149 ttaattaaataataacacacgtgacatgacacatagacgttgaccggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggtt 31645050  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| |  ||||||| ||||||||||| ||||||||    
T  31645049 aaaattgtagtttttgcacttagggggccaaaattgtaagttttt 31645005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 52840573 - 52840706
Alignment:
Q  257 cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttt 356  Q
    ||||||||||| |  |||| ||| ||| |||||| |||||||| |||| ||||| ||||||||| ||||  ||| |||||  ||||||||||||||||||    
T  52840573 cggtcaaaattaaccaaaatgataaaatttgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttt 52840672  T
Q  357 taaaaattaagggaggaaaaatgcactttagcca 390  Q
    | ||| ||| ||||||||||  ||||||||||||    
T  52840673 tgaaagttaggggaggaaaagggcactttagcca 52840706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 47610550 - 47610678
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  47610550 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 47610649  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     ||| |||  || |||||| |||||||||    
T  47610650 gaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 18009857 - 18009931
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 90  Q
    |||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  18009857 tgagttgaagatgatgaagattcatgagtttgggtttgaatg---gaagaagaagaacatggaggagtatgtagaaga 18009931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 287 - 385
Target Start/End: Complemental strand, 24516562 - 24516464
Alignment:
Q  287 gcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttt 385  Q
    ||||||| ||||| ||||  ||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||| ||| ||| | |||| ||||||||    
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 386
Target Start/End: Complemental strand, 39843220 - 39843054
Alignment:
Q  220 aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 319  Q
    ||||||||||| |||||||||||| | | || |||||| |||||||| | | |||| ||| |||||||||||||| ||||||  | | |||||||| |||    
T  39843220 aataattacacgcgtggcatgccatgcaagcgttgacctgtcaaaatcggtcaaaatgatgaaaattgcaaagggactaatttatagagggccaaatttg 39843121  T
Q  320 tagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |  ||||| ||| |||| | | |||||||||| ||||| ||| ||||||| | |||| |||||||||    
T  39843120 tcatttctttacataggggactaaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 47615510 - 47615608
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 319  Q
    |||||||||||||||| |||||||||||||||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||||||||||    
T  47615510 taattacacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 29932695 - 29932799
Alignment:
Q  284 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 383  Q
    ||||||||||| |||| ||||  |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||    
T  29932695 attgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcact 29932793  T
Q  384 ttagcc 389  Q
    ||||||    
T  29932794 ttagcc 29932799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 29981849 - 29981953
Alignment:
Q  284 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 383  Q
    ||||||||||| |||| ||||  |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||    
T  29981849 attgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcact 29981947  T
Q  384 ttagcc 389  Q
    ||||||    
T  29981948 ttagcc 29981953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 389
Target Start/End: Complemental strand, 47609861 - 47609697
Alignment:
Q  226 tacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 324  Q
    |||||| |||||||||||  | ||| |||||  ||||||||||| | ||||||| |||| |||||| |||||||| |||| |||||   ||||||| |||    
T  47609861 tacacatgtggcatgccaaattggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggtt 47609762  T
Q  325 tctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |   |||||||| || ||||||||||||||||| ||| ||| ||| |||||| |||| |||||||    
T  47609761 ttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcc 47609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 49220477 - 49220533
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattga 269  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  49220477 ttaattaaataattacacacgtggcaagccacgtagacattgaccggtcaaaattga 49220533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 52839213 - 52839037
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||| ||||| ||||||||| | |||| ||||| ||||||||||||||||||  |||||||| ||| |||||| |||||||| | || | |||      
T  52839213 ttaattcaacaattatacacgtggcgtaccacataggctttgaccggtcaaaattgaccaaaaggatgaaatttgcaatggggctaaattttagaggggt 52839114  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||| ||||   |||||||  || ||||||| ||| |||||  || |||  || |||||| ||||||||||||    
T  52839113 aaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagcc 52839037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 12703424 - 12703600
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||  |||||||||||| ||||    |||||||||  | |||| || ||||  ||||| |||||||| || | ||||||    
T  12703424 ttaattaattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattattcaaaatgaccaaagatgcaatggggctaaatcatagggggc 12703523  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||||| |||||||||| ||| ||||| ||| ||| |||||  |||| ||||||||||||    
T  12703524 caaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagaggga--aaaagtgcactttagcc 12703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 386
Target Start/End: Original strand, 23770346 - 23770505
Alignment:
Q  228 cacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttc 326  Q
    ||||||||||||||||| || || |||||  ||||||| ||||  |||||||  |||  |||||||||| ||| |||| |||||| |||||||||||||     
T  23770346 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttt 23770445  T
Q  327 tatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    | ||| || | | ||||||||| || ||||| |||||||||||  ||||| |||||||||    
T  23770446 tgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 389
Target Start/End: Complemental strand, 8876071 - 8875906
Alignment:
Q  225 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 323  Q
    ||||||| ||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||||  |||||| |||| ||||||||||||||||||    
T  8876071 ttacacatgtggcctgccacgtaggcgttgaataagtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagt 8875972  T
Q  324 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    || | ||| || | ||| |||||||||  |||||  || |||||||  ||||| ||||||||||||    
T  8875971 ttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 11670550 - 11670406
Alignment:
Q  224 attacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtag 322  Q
    |||||||||||||| ||||||||| || ||||    |||||||||||| |||||||  |||| ||||| ||| |||| || |  ||| |||||||| |||    
T  11670550 attacacacgtggcctgccacgtaagcgttgaataagtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatag 11670451  T
Q  323 tttctatacttaggaggccaaaattgcaagtttttaaaaattaag 367  Q
    ||| |||||||||| | | |||||||||| ||||| |||||||||    
T  11670450 tttttatacttaggggactaaaattgcaaatttttgaaaattaag 11670406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 19543733 - 19543781
Alignment:
Q  453 tgggatttaaaacctctttggaaacctcgacaatagaggaacccaaacc 501  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  19543733 tgggatttaaaacctctttggaaacctcgacattggaggaacccaaacc 19543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 534594 - 534531
Alignment:
Q  294 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||| |||| |||||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  534594 ggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagttttt 534531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 34019069 - 34019241
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| || ||||||||| ||||     ||||||||||  ||||||| ||||  |||||| | ||||| | || |||| |    
T  34019069 ttaattaattaattacacacgtggcctgtcacgtaggcgttgaataaatcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggac 34019168  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||| | | ||| |||| || ||||||||||||||||| ||| ||||||  ||||||||| ||||||    
T  34019169 caaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagg--ggaaaaatgtacttta 34019241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 46721190 - 46721321
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  | ||||| ||||  |||||||||||||| |||| |||| | ||||||||||||| | ||| |||| ||  ||||| |||| |||||    
T  46721190 ggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaacttttt 46721289  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| ||| |||  ||||| ||||||||||||    
T  46721290 aaaagttagggggagaaaagtgcactttagcc 46721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 5029682 - 5029783
Alignment:
Q  287 gcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||| ||||||||||||| |||||  |||||||| ||||   |||||||||||||||||||||||| |||| |||  | |||| |||||| |||||||||    
T  5029682 gcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 5029780  T
Q  387 gcc 389  Q
    |||    
T  5029781 gcc 5029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 47615591 - 47615649
Alignment:
Q  331 cttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 53616012 - 53616114
Alignment:
Q  284 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 383  Q
    |||||||||| |||||||||||||||||  |||||||||||| | ||| || |     |||||| ||||| ||||||| |||||||||||||| ||||||    
T  53616012 attgcaaaggagctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcact 53616111  T
Q  384 tta 386  Q
    |||    
T  53616112 tta 53616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 51347436 - 51347271
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||| || ||||||||| || |||||  |||||| |||||| |||| ||||||| ||||||| ||| ||| |||| ||||| |||||||||    
T  51347436 taattacacacgtagcctgccacgtatgcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgt 51347337  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
      ||| | | | |||  | |||||||||||| ||||| ||| ||||| | || ||| |||||||||    
T  51347336 catttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 10583976 - 10584067
Alignment:
Q  224 attacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaa 315  Q
    |||||| |||||||||||||| ||||  |||||  ||||||||||||  |||||| |||| |||||||||||||||| |||| ||||||||||    
T  10583976 attacatacgtggcatgccacttaggtgttgacttggtcaaaattgaccaaaagg-tcaatattgcaaaggggctaaatcttagggggccaaa 10584067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 320
Target Start/End: Complemental strand, 26722708 - 26722601
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | ||||||||||||||||||||||| ||||| |||||  |||||||||||   |||||| |||  |||||||||||||||| || | |||| |    
T  26722708 ttaatttagtaattacacacgtggcatgccacttaggcgttgactaggtcaaaattggctaaaagg-tcactattgcaaaggggctaaatcataggggac 26722610  T
Q  312 caaaattgt 320  Q
    |||||||||    
T  26722609 caaaattgt 26722601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 49401413 - 49401497
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggct 297  Q
    ||||||||||||||||| |  ||   ||||||||||||||||| | ||||||||||| ||||||||| |||| |||||| |||||    
T  49401413 ttaattcaataattacatatatgatgtgccacgtaggcattgatcagtcaaaattgacaaaaaggataaaaaatgcaaatgggct 49401497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 389
Target Start/End: Original strand, 11671313 - 11671441
Alignment:
Q  260 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaa 359  Q
    ||||||||||| ||||||| ||||  || ||||||| ||| || | ||||| ||||  |||||||| |||| ||||| ||| |||||||||||||||| |    
T  11671313 tcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttga 11671412  T
Q  360 aaattaagggaggaaaaa-tgcactttagcc 389  Q
    || |||  || ||||||| ||||||||||||    
T  11671413 aagtta--ggcggaaaaagtgcactttagcc 11671441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 54986931 - 54987103
Alignment:
Q  213 ttaattcaataattacacacgt-ggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||| |||| | ||| |||||| |||  ||||||||||||||||||   |||| |||||||  |||||||| ||||| |||| | |||     
T  54986931 ttaattaaataattaaacacctaggcgtgccacatagaaattgaccggtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggt 54987030  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||| |||||| ||||| |||| | | ||||| |||| ||||| ||| |||  || |||||| |||||||||    
T  54987031 caaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 53897231 - 53897173
Alignment:
Q  260 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaatt 318  Q
    ||||||||||  |||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  53897231 tcaaaattgaccaaaaggatcaaagttgcaaatgggctaatacttagggggccaaaatt 53897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 535787 - 535884
Alignment:
Q  293 gggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||| |||| |||||  |||||| ||||||  ||||||| | | |||||||||||||||||| ||| ||| ||| |||||| | |||||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcca 535884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 5001260 - 5001200
Alignment:
Q  329 tacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||| ||||||||||||||| |||| |||  || |||||||||| ||||||||||||    
T  5001260 tacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcc 5001200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 6171168 - 6171223
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg 268  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||   ||||||||||    
T  6171168 ttaattcaataattacacatgtggcgtgccaagtaggcattgattagtcaaaattg 6171223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 28263129 - 28263212
Alignment:
Q  306 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||||||| ||| ||| |||||| ||||||||||||    
T  28263129 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcc 28263212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 32829915 - 32829829
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattga-ccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaa 299  Q
    |||||||||||| ||||||| ||||||||||| |||   |||| ||||||||||||||| |||||| |||   |||||||||||||||    
T  32829915 ttaattcaataaatacacacatggcatgccacatagtggttgacccggtcaaaattgatcaaaagg-tcacttttgcaaaggggctaa 32829829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 51470425 - 51470555
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| || ||||| |||| ||||  | ||||||| ||||   |||||||| |  | |||||||||||||||    
T  51470425 ggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagttttt 51470524  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| || |||| |||| | ||||||||||||    
T  51470525 gaaagtt-aggggggaagagtgcactttagcc 51470555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 26723786 - 26723889
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||| |||||||||||| || || |||||  ||||||||||||  |||||| |||  |||||||||||||||| || | |||| |    
T  26723786 ttaatttagtaattacacatgtggcatgccacttaagcgttgactaggtcaaaattgactaaaagg-tcactattgcaaaggggctaaatcataggggac 26723884  T
Q  312 caaaa 316  Q
    |||||    
T  26723885 caaaa 26723889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 53901391 - 53901488
Alignment:
Q  291 aggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||  || ||||||||| |||||||||| | |||||| |  | ||||||||||| ||||| ||| |||  || |||||| |||||||||||||    
T  53901391 aggggctaatatttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcca 53901488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 7e-57; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 40255597 - 40255773
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||| ||| |||| |||||||    
T  40255597 ttaattaaataattacacacgtggcacgccacgtaggcattgaccggtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttagggggcc 40255696  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||||| || ||||| || ||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  40255697 aaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcc 40255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 28538852 - 28538676
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||     
T  28538852 ttaattcattaattacacacgtggcatgccacatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggct 28538753  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||| | || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  28538752 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcc 28538676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 36486413 - 36486589
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||| |||| ||    
T  36486413 ttaatttattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggacc 36486512  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||| ||| ||| | |||| ||||||| ||||    
T  36486513 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 36486589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 28539745 - 28539917
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| |||| |||| ||    
T  28539745 ttaatttattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggacc 28539844  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | |||||||  || ||||||||||||||||||||| || |||| ||||||||||||||||    
T  28539845 aaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 33160212 - 33160387
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||   |||||||| ||| |||||| ||| |||| ||||  |||| |    
T  33160212 ttaattcaataattacacatgtggcgtgccacgtaggcattgaccggtcaaaattggctaaaaggattaaagttgcaatggg-ctaaatcttaaggggtc 33160310  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  33160311 aaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 213 - 387
Target Start/End: Complemental strand, 36485476 - 36485302
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| ||||||||  ||||||||||||  |||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||| |||| |||||||    
T  36485476 ttaattcattaattacatccgtggcatgccatataggcattgaccggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggcc 36485377  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 387  Q
    |||||| |||||| | |||||| |||| |||||||| |||||||| ||| ||| ||| |||||||||||||||||    
T  36485376 aaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 18486826 - 18487003
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||    
T  18486826 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggc 18486925  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||| || ||| ||||||||||||    
T  18486926 caaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcc 18487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 24333089 - 24332916
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| |||| | ||| |    
T  24333089 ttaatttaataattacacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc 24332990  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | ||| || | |||||||||||||||||||| ||| ||||||| | |||| |||||||||    
T  24332989 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 25523246 - 25523069
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | ||||||||||||||||| ||||||||||| ||||     ||||||||||| ||||||||||||  |||||||||||||| |||| |||||     
T  25523246 ttaattaattaattacacacgtggcaggccacgtaggcgttgaataaatcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggt 25523147  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||||| ||| |||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  25523146 caaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 25523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 16650779 - 16650956
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| |||||||||||||||||||||||  | || |||||  | ||||||||||  ||||||| ||||  |||||| |||||||  ||| ||||||    
T  16650779 ttaattcattaattacacacgtggcatgccacacatgcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggc 16650878  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||||||||| |||||||||| || ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  16650879 taaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 1797222 - 1797397
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| |||| | |||||| ||||||||||||||| ||||  ||| ||    
T  1797222 ttaattcaataattacacatgtggcgtgccacataggcattgaccggtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggacc 1797321  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |   || |  ||||||||||||||||||||||| |||| || | |||||| ||||||||||    
T  1797322 aaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaaagg-gaaaaaatccactttagcc 1797397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 20216687 - 20216861
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||||||||||| | |||||  ||||| ||||||| |||||||||||   ||||||  |  |||||||| |||||||||||||||||||    
T  20216687 ttaatttaataattacacacgtgacctgccatataggcgttgaccgagtcaaaattgacgtaaaggactactattgcaaatgggctaattcttggggggc 20216786  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||| | ||  ||||  || |||||||||||||||| ||||||||||| |||||| |||||||||    
T  20216787 caaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 19753088 - 19752912
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||| |||||||| || | ||||||    
T  19753088 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggc 19752989  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| ||| || |||| |||||| ||||||||||||    
T  19752988 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 19752912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 218 - 390
Target Start/End: Original strand, 22940552 - 22940724
Alignment:
Q  218 tcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 316  Q
    |||||||||| |||||||||||||||| ||||| |||||  ||||||||||||  |||||||| |||  || ||||||||||| | || |||| | ||||    
T  22940552 tcaataattatacacgtggcatgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttaggggtc-aaaa 22940650  T
Q  317 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||| ||| | |||||||| |||||||||||||||||||| ||| ||||||| |||||| |||||||||||||    
T  22940651 ttgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcca 22940724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 213 - 381
Target Start/End: Complemental strand, 1015660 - 1015492
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||   ||||||| ||||  ||||||||| ||||||||| |||||      
T  1015660 ttaattcaataattacacatgtggcatgtcacgtaggcattgattggtcaaaattggggaaaaggaccaaatatgcaaagggactaattcttagggggtt 1015561  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgca 381  Q
    |||||||||| || | |||  ||| ||||||||||| || ||||||||| ||| |||||||||| ||||    
T  1015560 aaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 20214372 - 20214195
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||||||||||||| |||||  ||||| ||||||| ||||||||||| | ||||||  |  |||||||| ||| ||||||||| |||||    
T  20214372 ttaatttaataattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattcttgaggggc 20214273  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    |||||||||||||| | ||| |||   || |||||||||||||||| ||| ||||||| |||||| |||||||||||||    
T  20214272 caaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcca 20214195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 1796231 - 1796053
Alignment:
Q  213 ttaattcaataa-ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggggg 310  Q
    |||||||||||| ||||||| ||||| |||||  ||||| ||||| | |||||||||||   ||||||  |  |||||||| ||| |||||||||||||     
T  1796231 ttaattcaataaattacacatgtggc-tgccatataggcgttgactgagtcaaaattgaactaaaggactactattgcaaatgggttaattcttggggga 1796133  T
Q  311 ccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
     |||||||||||||| | |||||||| ||||||| |||||||||||| ||| ||| ||| ||||||||||||||||||||    
T  1796132 tcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcca 1796053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 19754054 - 19754232
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| | |||||||||| ||||    |||||||||| | ||||||| ||||  ||||| |||||||| || | ||||||    
T  19754054 ttaattaattaattacacacgtggccttccacgtaggcgttgaataagtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggc 19754153  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag-gaaaaatgcactttagcc 389  Q
    |||||||||||||| | || ||||| |||||||||||||||||||| ||| ||| ||| |  |||||||||||||||||    
T  19754154 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcc 19754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 1016789 - 1016961
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   |||| || |||   |||||||| ||||||||||  || | |    
T  1016789 ttaattcaataattacacacgtgacatgctacgtaggcattgaccgatcaaaattggggaaaatgaccaactatgcaaaggagctaattctt-aggagtc 1016887  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | ||| ||| || |||||||| ||| ||||||||||||| |||   |||||| |||||||    
T  1016888 aaaattgtagtttttgtacatagaagaccaaaattacaattttttaaaaattagggggaaaaaaatacacttta 1016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 389
Target Start/End: Complemental strand, 25055580 - 25055412
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  ||||||||  | ||||||||||| ||||||| ||||  |||||| ||||||| |||| |||||||||||||||    
T  25055580 taattacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgt 25055481  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||| ||||| |||| |  ||||||||||||   || ||| |||  || |||||| ||||||||||||    
T  25055480 agtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcc 25055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 18485322 - 18485138
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    ||||||||| |  ||||||||||||  |||||||||||||| |||| ||||||    
T  18485322 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggc 18485223  T
Q  312 c-------aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |       |||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || | |||| ||||||||||||    
T  18485222 caaaacccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcc 18485138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 42195300 - 42195137
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  || |||||  ||||||||||||  ||||||| ||||  |||||||||||||| |||| |||| ||||||||||    
T  42195300 taattacacacgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgt 42195201  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    || || | ||| |||| ||||||||| |||| ||||| ||| ||||||| |||||| |||||||||    
T  42195200 agattttgtacatagggggccaaaatcgcaacttttt-aaagttaaggg-ggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 25524022 - 25524158
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||  |||||||||||| ||||    |||||||||||  |||||||  |||  |||||||||||||| |||| |||||     
T  25524022 ttaattaattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggt 25524121  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattg 348  Q
    ||||||| |||||| | ||||||||||||||||||||    
T  25524122 caaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 5778806 - 5778937
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||| ||||||||||||||||    
T  5778806 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagttttt 5778905  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| |||  || |||||| ||||||||||||    
T  5778906 gaaagttagagggggaaaagtgcactttagcc 5778937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 393
Target Start/End: Original strand, 25056387 - 25056486
Alignment:
Q  294 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccatat 393  Q
    |||||| |||| ||||| ||||||||||||||  ||||||||| || ||||||||||||||||| ||| ||| | | |||||| ||||||||||||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagccatat 25056486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 5961582 - 5961476
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||| |||||||||||||| || |||| ||||||||||| |||| || | ||||||||||||  |||||||||| ||| | || ||||||     
T  5961582 ttaattaaataataacacacgtggcatgtcatgtagacattgaccggttaaaaatggtcaaaaggatcaaagatgcaaaggggttaaattttagggggct 5961483  T
Q  313 aaaattg 319  Q
    |||||||    
T  5961482 aaaattg 5961476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 16650167 - 16650045
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 313  Q
    |||||| || ||||||||||||||||||||  | ||||||||  ||||||||||||  ||||||| ||||  |||||||||| ||| |||| | ||| ||    
T  16650167 aattcattatttacacacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtca 16650068  T
Q  314 aaattgtagtttctatacttagg 336  Q
    |||||||||||| | ||||||||    
T  16650067 aaattgtagtttttgtacttagg 16650045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 25524148 - 25524229
Alignment:
Q  309 ggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 389  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| |||||||||||||  ||| |||||| ||||||||||||    
T  25524148 ggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcc 25524229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 14061537 - 14061628
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt 304  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||| || ||||||  | ||||||||||||| |||||| | ||||| ||||    
T  14061537 ttaattcaataattatatacgtggcatgccacataggcgttgaccagtaaaaatttgtcaaaaggatcaaaaatgcaaatgagctaaatctt 14061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 2686372 - 2686474
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||| ||||||| ||||  ||||| | |||||| || | |||| |||||||| |||||| | |||||| |||  ||||||||||||||||||    
T  2686372 gtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagttttta 2686471  T
Q  359 aaa 361  Q
    |||    
T  2686472 aaa 2686474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 598
Target Start/End: Complemental strand, 20424952 - 20424808
Alignment:
Q  455 ggatttaaaacctctttggaaacctcgacaatagaggaacccaaaccacaccaagatggtggttcttgaatatagtccaagtatgctac-gggacactcc 553  Q
    ||||||||||||||||| ||||||  |||| | || ||||| |||||| |||||||||| || |||||| ||||||| |||| ||  || | | ||||||    
T  20424952 ggatttaaaacctctttagaaaccatgacattggaagaacctaaaccataccaagatgggggatcttgattatagtctaagtctgtcacagcgtcactcc 20424853  T
Q  554 agggaccaacaatgtgcatatcaagaaatttactactttgttggt 598  Q
    | | |||||| ||| |||||||| |||||||  | ||||||||||    
T  20424852 aagaaccaactatgcgcatatcaggaaatttgttgctttgttggt 20424808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 357
Target Start/End: Original strand, 5730832 - 5730931
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||| | |||| |||||| |||| ||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||| ||||||||    
T  5730832 ggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 7311685 - 7311622
Alignment:
Q  294 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||| |||| |||||| ||||||||||||| | ||||| ||||||||| |||||||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagttttt 7311622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 5778016 - 5777901
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| || ||||||||||||||||| ||| |||  || |    
T  5778016 aaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--gggg 5777919  T
Q  372 gaaaaatgcactttagcc 389  Q
    | ||| ||||||||||||    
T  5777918 ggaaagtgcactttagcc 5777901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 21835157 - 21835083
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaat 346  Q
    |||||||||||| ||||||||||| ||| |||| ||||| |||||||||||||| | ||| |||| || ||||||    
T  21835157 aaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaat 21835083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 33158180 - 33158098
Alignment:
Q  307 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| |||||||||||||| | ||||||||  | ||||||||||||||||| ||| ||| |||   |||||||||||||||||    
T  33158180 ggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcc 33158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 5730502 - 5730441
Alignment:
Q  329 tacttaggaggccaaaattgcaagtttttaaaaattaa-gggaggaaaaatgcactttagcc 389  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||    
T  5730502 tacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcc 5730441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 32234275 - 32234222
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaa 66  Q
    |||| |||||||||| || ||||||||||||| |||||||| ||||||||||||    
T  32234275 tgagttgaagatgataaagattcatgagtttgagtttgaattgaagaagaagaa 32234222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 24468509 - 24468601
Alignment:
Q  211 aattaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattc 302  Q
    |||||||| ||||||||||||||||||||| ||| || ||| |||  | |||||||||||| |||||||  || |||| ||| ||||||||||    
T  24468509 aattaattgaataattacacacgtggcatgacacataagcaatgattgagtcaaaattgattaaaaggactaatattgtaaatgggctaattc 24468601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 42196133 - 42196301
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| |||||||||||  |  || |||||  ||||||||||||  ||||||| ||||  |||||| ||||||| |||| |||| | |||| |||    
T  42196133 taattacacatgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgt 42196232  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||| | ||| |||  ||||||| |  ||| ||||||||| ||| ||| || ||| ||||||||||||    
T  42196233 agtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagcc 42196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 538
Target Start/End: Original strand, 12402285 - 12402368
Alignment:
Q  455 ggatttaaaacctctttggaaacctcgacaatagaggaacccaaaccacaccaagatggtggttcttgaatatagtccaagtat 538  Q
    ||||||||||| ||||| ||||||  |||| | || |||| ||||||| ||||||| || || ||||||||||| |||||||||    
T  12402285 ggatttaaaacatctttagaaaccatgacattggaagaactcaaaccataccaagacgggggatcttgaatataatccaagtat 12402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 41663768 - 41663827
Alignment:
Q  331 cttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    |||||| ||||||||| |||| ||||||||| |||| ||  |||||||||||||||||||    
T  41663768 cttagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagcca 41663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 2186901 - 2186774
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  ||||||| ||||  || |||  |||||| |||| ||||   ||||||||||||| | ||| ||| || |||||||||||| |||||    
T  2186901 ggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaacttttt 2186802  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     ||| || |||| | ||||||||||||||    
T  2186801 gaaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 3e-53; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 10784770 - 10784592
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaa-ggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| ||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||    
T  10784770 ttaatttaataattacacacatggcgtgccccgtaggcattaaccggtcaaaattgataaaaaaggatcaaagttgcaaaggggctaaatctttgggggc 10784671  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga-ggaaaaatgcactttagcc 389  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  10784670 caaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcc 10784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 213 - 384
Target Start/End: Complemental strand, 29473253 - 29473082
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  29473253 ttaattcaataattacacatgtggcatgccacgtaggcattgaccggtaaaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggcc 29473154  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactt 384  Q
    ||||||||  ||| | | | ||||   |||||||||||| ||||||||| ||||||| |||||| |||||||    
T  29473153 aaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 215 - 389
Target Start/End: Complemental strand, 14822534 - 14822360
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||| |||||| | | |||| |||| |||||||||    
T  14822534 aatttaataattacacacgtggcgtgccacgtaagcattgaccggtcaaaatagattaaaaggattaaagttgcaatgagactaaatcttagggggccaa 14822435  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||||||||  ||||| |||||| |||||    
T  14822434 aattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 1829528 - 1829701
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| || ||||||||||||||  |||||||||||||||||||||||||||||||  |||| || ||||  |||||||||||||| |||| |||||||    
T  1829528 ttaatttaacaattacacacgtggtgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggcc 1829627  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||| ||| |||   |||| |||||||||    
T  1829628 aaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 16704422 - 16704598
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||  |||||||||| ||||||||||| | |||||||| |||||| ||||   ||  |    
T  16704422 ttaattcattaattacatacgtggcataccacgtaggcattgaccaatcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatc 16704521  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcc 16704598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 14823502 - 14823677
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || ||  |||||| ||  |||| |||| |||||||||    
T  14823502 aatttaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaa 14823601  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaa-tgcactttagcc 389  Q
    ||||||||||||| |||||| | ||| |||||||||||||||| ||||||||||| | ||||| ||||||||||||    
T  14823602 aattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcc 14823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 26574979 - 26575123
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| ||||||| || |||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||| | ||| |||| |||||||    
T  26574979 ttaattcattaattacgcatgtggcatgccacgtagacattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggcc 26575078  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| | |||||| | ||  ||||||||||||||||    
T  26575079 aaaattgtagtttttgtacttaaggggttaaaattgcaagttttt 26575123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 7316218 - 7316395
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| || |  |||||||||||||| ||||  |||||    
T  7316218 ttaattaattaattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggc 7316317  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| ||||| ||| ||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  7316318 caaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 10785838 - 10785986
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||||  |||||||||| |||||||||||||| ||||||||||||||| ||||  ||||      
T  10785838 ttaatttaataattacacacgtggcgtgccatgtatgcattgactagtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggtt 10785937  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaa 361  Q
    ||||||||||||| | |||||||| ||  |||||||||| |||||||||    
T  10785938 aaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaa 10785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 7315056 - 7314879
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  |||| || ||||  |||||||||||||| |||| |||||     
T  7315056 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggt 7314957  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || |||||| |||||||||||||    
T  7314956 caaaattgttgttttgatacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcca 7314879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 8659396 - 8659265
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  8659396 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 8659297  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| |||  || |||||| ||||||||||||    
T  8659296 gaaagttagagggggaaaagtgcactttagcc 8659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 27437959 - 27437828
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||   ||||||| |||| ||||||||| ||||| |||| ||||| |||||||||||||| |||   |||| |||||||||||||| |||||    
T  27437959 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 27437860  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| |||||||  ||||| ||||||||||||    
T  27437859 taaagttaaggggagaaaagtgcactttagcc 27437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 34834549 - 34834677
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||  |||||||||||  |||||||||||||||||    
T  34834549 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagttttt 34834648  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     ||| ||| ||  |||||| |||||||||    
T  34834649 gaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 389
Target Start/End: Complemental strand, 26574765 - 26574619
Alignment:
Q  242 cacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggcc 341  Q
    |||||||||||| | ||||||||||||| ||||| ||||||| ||||||||||||||| ||||  |||  ||||| |||||||| | |||||||  |  |    
T  26574765 cacgtaggcattaatcggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaa-tgtagtttttgtacttagaggttc 26574667  T
Q  342 aaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||||| ||| |||  || || ||| ||||||||||||    
T  26574666 aaaattgcaagtttttgaaagttagaggtgggaaattgcactttagcc 26574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 5658887 - 5658759
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  |||||||||||| ||||||| ||||||| ||||  |||  |||||||||||||| | ||| ||||   | ||||||  || |||||    
T  5658887 ggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataacttttt 5658788  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
    |||| ||||||| ||||||||||||||||    
T  5658787 aaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 8660174 - 8660304
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | |||||||||||| |||||| || ||||| |||| ||||| | ||||||| ||||   |||||||| || |||||||||||||||||    
T  8660174 ggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagg-ggtcaaaattgcaagttttt 8660272  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| ||| | | |||||| ||||||||||||    
T  8660273 gaaagttaggaggggaaaagtgcactttagcc 8660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 388
Target Start/End: Original strand, 12382644 - 12382811
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  || || ||||||  |||||||||    ||||||| ||||  |||||| ||| ||| |||| ||||  ||||||| |    
T  12382644 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattat 12382743  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 388  Q
    |||||  ||||||||| || ||||||| ||| |||||||||||||  || |||||| |||||||||||    
T  12382744 agttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 8821990 - 8821873
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| |||| |||||| || ||||| |||| ||||| | ||||||| ||||   |||||||| |||||||||||||||||||| ||| |||  || |    
T  8821990 aaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggg 8821891  T
Q  372 gaaaaatgcactttagcc 389  Q
    ||||| ||||||||||||    
T  8821890 gaaaagtgcactttagcc 8821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 3721743 - 3721612
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| ||||  |||| | ||||| | ||||   |||||||| || |||||||||||||||||    
T  3721743 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagttttt 3721644  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| |||  || |||||| ||||||||||||    
T  3721643 gaaagttagagggggaaaagtgcactttagcc 3721612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 8822777 - 8822895
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| |||| ||||||  ||||||| |||| ||||| | ||||||| ||||   |||||||| || ||||||||||||||||| ||| |||| |  |    
T  8822777 aaaaggaccaaagttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagg 8822876  T
Q  372 gaaaaatgcactttagcca 390  Q
    ||||| |||||||||||||    
T  8822877 gaaaagtgcactttagcca 8822895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 370
Target Start/End: Original strand, 26949110 - 26949264
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||| ||||| ||||| | |||||||||| ||||||||||||| ||||  |  |||  |||||||||| ||| |||| |  |       
T  26949110 ttaatttaataattacacatgtggcgtgccatgaaggcattgactggtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagatt 26949209  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga 370  Q
    ||||||||||||| |||||||||  || ||||||||||| ||||| ||| ||||||||    
T  26949210 aaaattgtagtttttatacttag--gggcaaaattgcaa-tttttgaaagttaaggga 26949264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 27322067 - 27322168
Alignment:
Q  287 gcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||||||| |||||  |||||||| ||||   |||||||| ||||||||||||||| |||| |||  | |||| |||||| |||||||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 27322165  T
Q  387 gcc 389  Q
    |||    
T  27322166 gcc 27322168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 1828789 - 1828739
Alignment:
Q  339 gccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| |||||||||||||| || | |||||||||||||||||    
T  1828789 gccaaaattgcaaatttttaaaaattaaaggggaaaaaatgcactttagcc 1828739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 16703734 - 16703569
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| ||||||||||||||| |||||||||| | ||||||||||         |||||||||||||| |||  |||||| ||| | || ||||||     
T  16703734 ttaattcattaattacacacgtggaatgccacgtaagtattgaccggt---------taaaaaggatcaaagttgggaaggggttaaattttagggggct 16703644  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||| | || ||| | |  ||||||||||||||||| |||  ||  || |||||| |||||||||||||    
T  16703643 aaaattgtagtttttgtatttatg-gatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcca 16703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 259 - 389
Target Start/End: Complemental strand, 17496928 - 17496793
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||| ||||||| ||||  ||||||| || ||| |||| ||||||||||||||| ||||| | |||||||  ||  ||||||| ||||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagttttt 17496829  T
Q  358 aaaaattaag----ggaggaaaaatgcactttagcc 389  Q
     ||| ||| |    || |||||||||||||||||||    
T  17496828 gaaagttagggggagggggaaaaatgcactttagcc 17496793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 26717046 - 26717144
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 319  Q
    |||||||| | |||||||||||  || ||||||||  ||||||||||||| |||||||||||| ||||||| | ||||| ||||  |||| ||||||||    
T  26717046 taattacataggtggcatgccaattaagcattgacttggtcaaaattgatcaaaaggatcaaagttgcaaaagagctaaatcttaaggggtcaaaattg 26717144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 3333010 - 3333095
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||| ||||||||||||||| | || | |||  ||||||||||||| | ||| |||| ||||||||| |||| |||||    
T  3333010 aaaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaacttttt 3333095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 355
Target Start/End: Complemental strand, 12350898 - 12350832
Alignment:
Q  288 caaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttt 355  Q
    |||||||||||| |||| |||||  ||||||||||||| ||||| |||| || |||||||||||||||    
T  12350898 caaaggggctaaatcttagggggttaaaattgtagtttttatacatagg-ggtcaaaattgcaagttt 12350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 27447963 - 27448014
Alignment:
Q  338 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||| || ||||||||| ||||||| |||||| ||||||||||||    
T  27447963 ggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 27448014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 13345682 - 13345723
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgac 256  Q
    ||||||||||||||||| |||||||||||| || ||||||||    
T  13345682 aattcaataattacacatgtggcatgccacatatgcattgac 13345723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 6842308 - 6842384
Alignment:
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| |  || |||| |||||||||||||| ||||| ||| |||  || |||||| ||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 31599965 - 31599789
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||| |||| ||    
T  31599965 ttaatttattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggacc 31599866  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||| ||| ||| | |||| ||||||| ||||    
T  31599865 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 31599789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 213 - 390
Target Start/End: Original strand, 31600910 - 31601087
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||  |||| |    
T  31600910 ttaattcattaattacacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtc 31601009  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||| |||  || | |||| |||||||||||||    
T  31601010 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcca 31601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 35935458 - 35935631
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||   |||||||| ||| |||||| | |||||| |||| |||||||    
T  35935458 ttaattcaataattatacacgtggcgtgccacataggcattgaccggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggcc 35935557  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | |||||||| ||| |||||||||| ||||||||| ||||||| || ||| |||||||||    
T  35935558 aaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 52491534 - 52491708
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||  |||||||| ||| |||||| |||||||| | || |||||||    
T  52491534 ttaattcaataattacacacgtggc--gccacgtaggcattgacctgtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggcc 52491631  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||||| || ||||  | |||||||||||||||||| ||| ||||||| |||||| | ||||||||||    
T  52491632 aaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcc 52491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 8758766 - 8758935
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||    |||||||||||||| || ||||||||||  |||||||| |||||||||| || ||||| ||||  ||||||    
T  8758766 ttaattaaataattacacacgtggc----cacgtaggcattgatcgatcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggcc 8758861  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||| |||| ||||    
T  8758862 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 10448185 - 10448361
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||  |||||||||||||  |||| | |||||    
T  10448185 ttaattcaataattacacacgtggcatgccacgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggcc 10448284  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | ||| |||| ||| ||||| |||| ||||| ||| ||| ||||||  || ||||||||||||    
T  10448285 aaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcc 10448361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 1290131 - 1290299
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| |||||||||||| ||||| ||||| |||||||||||||  ||||||| ||||  |||||||||| ||| |||| |||||| ||||||||    
T  1290131 taattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgt 1290230  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||| | |||||||  ||||||||||||||| |||| ||| ||||||| |||||| ||||||||||||    
T  1290231 agtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcc 1290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 257 - 389
Target Start/End: Complemental strand, 1963328 - 1963196
Alignment:
Q  257 cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttt 356  Q
    |||||||||||| ||||||||| ||  ||||||||||||||||||||| |||||| ||||||||||||| | ||| ||||||||||||||||||| ||||    
T  1963328 cggtcaaaattgctaaaaaggaccactattgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttt 1963229  T
Q  357 taaaaattaagggaggaaaaatgcactttagcc 389  Q
    | ||| ||||||| |||||| ||||||||||||    
T  1963228 tgaaagttaaggggggaaaagtgcactttagcc 1963196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 35934518 - 35934347
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||  ||||| || ||| |||||| |||||||| ||||  ||||||    
T  35934518 ttaattcattaattacacacgtgacatgccacgtaggcattgactggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggcc 35934419  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||| || ||||| |||||||| | |||||||| ||||||||| ||| |||  || |||||| |||||||||    
T  35934418 aaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 17388135 - 17388311
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    ||||||||||||||||||||||||| |||||  ||||| ||||||  |||||||||||   ||||||  |  |||| |||||||||||||||||||||||    
T  17388135 ttaattcaataattacacacgtggcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggc 17388234  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||| | | |||||||||||||||||| ||| || |||| |||||| ||||||||||||    
T  17388235 caaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 17388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 240 - 389
Target Start/End: Complemental strand, 8757822 - 8757675
Alignment:
Q  240 gccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggagg 339  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||||||| |||||||| ||||  ||| ||||||||||||||||| |||||||| ||    
T  8757822 gccacgtaggcattgaccg-tcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttaggggg 8757724  T
Q  340 ccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    | ||||||| |||||||| ||| ||||||| | |||| ||||||||||||    
T  8757723 ctaaaattgtaagtttttgaaagttaaggg-gaaaaagtgcactttagcc 8757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 389
Target Start/End: Complemental strand, 10447182 - 10447006
Alignment:
Q  214 taattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 313  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    ||||||| ||||  |||||||||||||| |||| |||||  |    
T  10447182 taattcaataattacacacgtggcgtgccacgtaggcattgactggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggta 10447083  T
Q  314 aaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaag-ggaggaaaaatgcactttagcc 389  Q
    ||||||| |||| | ||| |||| ||| |||||||||| ||||| ||| ||||| || |||||| ||||||||||||    
T  10447082 aaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 390
Target Start/End: Original strand, 50909597 - 50909775
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggc 311  Q
    |||||| ||||||||||| ||| ||||| ||| ||| ||||||||||||||||||||| ||||||| ||||  |||||||||||||| ||||  |||||     
T  50909597 ttaattaaataattacacgcgttgcatgtcacatagacattgaccggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggt 50909696  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaa-tgcactttagcca 390  Q
    |||||||||||||| ||||| ||||  | |||||| |||| ||||||||| || |||| ||||||| |||||||||||||    
T  50909697 caaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaactt-agggtggaaaaagtgcactttagcca 50909775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 17383169 - 17382993
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    ||||||||||||||||||| ||||  |||||  ||||| ||||||  |||||||||||   ||||||  |  |||||||||||| |||||||||||||||    
T  17383169 ttaattcaataattacacaggtggtctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggc 17383070  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||| | | |||||||||||||||||| ||| ||| |||| ||||| ||||||||||||    
T  17383069 caaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttagggga-gaaaagtgcactttagcc 17382993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 1835035 - 1835203
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  || || ||||||  ||||||||||   ||||||| ||||  |||||||||||||| |||| ||||| |||||||||    
T  1835035 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgt 1835134  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||  |||||| ||||||||||||    
T  1835135 agttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagcc 1835203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 12129800 - 12129626
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||| |||| || ||||  |||||| ||||||| ||||  ||||     
T  12129800 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggt 12129701  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||| | |||||| | |||||||||||||||||||| ||| ||||| | |||||| |||||||||    
T  12129700 caaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 286 - 376
Target Start/End: Original strand, 21539069 - 21539159
Alignment:
Q  286 tgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaa 376  Q
    |||||||| ||||| |||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  21539069 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaa 21539159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 222 - 390
Target Start/End: Original strand, 1964374 - 1964543
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  || |||||  ||||||||||| ||||||||| ||  || ||||||||| ||||||||  ||| ||||||||||    
T  1964374 taattacacacgtggcatgccaaatcagcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattcttaagggaccaaaattgt 1964473  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||| | | | |||| ||||||||||| || ||||||||| ||||||| |||||| |||||||||||||    
T  1964474 agtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcca 1964543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 387
Target Start/End: Original strand, 19750545 - 19750673
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||| |||  |||||||||||| |||||| |||||||| |||| |||||  ||||||||||||| | |||||||| ||||||||||||||||||||    
T  19750545 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19750644  T
Q  358 aaaaattaagggaggaaaaatgcactttag 387  Q
    |||| || |||| |||||| ||||||||||    
T  19750645 aaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 19789261 - 19789133
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||| |||  |||||||||||| |||||| |||||||| |||| |||||  ||||||||||||| | |||||||| ||||||||||||||||||||    
T  19789261 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19789162  T
Q  358 aaaaattaagggaggaaaaatgcactttag 387  Q
    |||| || |||| |||||| ||||||||||    
T  19789161 aaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 258 - 390
Target Start/End: Original strand, 10471358 - 10471490
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  10471358 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 10471457  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
     ||| ||||||| |||||| |||||||||||||    
T  10471458 gaaagttaaggggggaaaagtgcactttagcca 10471490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 1834288 - 1834118
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggccaaaattg 319  Q
    ||||||||||||||||||||||  |  |||||||   ||||||||||||  ||||||| ||||  |||||| ||||||| |||| |||||||||||||||    
T  1834288 taattacacacgtggcatgccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattg 1834189  T
Q  320 tagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    |||||| ||||| |||| || |||||||| |||||||| ||| |||  || |||||| |||||||||||||    
T  1834188 tagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcca 1834118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 21178172 - 21178060
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| ||||| |||||||||| |||||| |||||||||||| ||||||||||  ||||| ||||||| ||||||| ||||||| | || ||||| |    
T  21178172 ttaattcattaattgcacacgtggcgtgccacataggcattgaccagtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtc 21178073  T
Q  313 aaaattgtagttt 325  Q
    |||||||||||||    
T  21178072 aaaattgtagttt 21178060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 258 - 394
Target Start/End: Complemental strand, 25685065 - 25684929
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||  || |||||||||||||||||    
T  25685065 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagttttt 25684966  T
Q  358 aaaaattaagggaggaaaaatgcactttagccatatt 394  Q
     ||| ||| ||| |||||| |||||||||||||||||    
T  25684965 gaaagttagggggggaaaagtgcactttagccatatt 25684929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 214 - 389
Target Start/End: Original strand, 13509284 - 13509459
Alignment:
Q  214 taattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||| || ||||||| ||||||||||||  | || |||||  |||||||||||   ||||||| ||||  |||||||||||||| |||| ||||  |    
T  13509284 taattcattatttacacatgtggcatgccacacatgcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatc 13509383  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||  |||||| || |||||||||||||| ||||||||| || |||| |||||| | ||||||||||    
T  13509384 aaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactttagcc 13509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 5526096 - 5526226
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| ||||||||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  5526096 ggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagttttt 5526195  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| || || | |||||| ||||||||||||    
T  5526196 gaaagtt-agaggggaaaagtgcactttagcc 5526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 10470677 - 10470546
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||| | |||||||  |||   |||||||  || |||||||||||||||||    
T  10470677 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagttttt 10470578  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| ||||||| |||||| ||||||||||||    
T  10470577 gaaagttaaggggggaaaagtgcactttagcc 10470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 25685792 - 25685923
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  25685792 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagttttt 25685891  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| |||  || |||||| ||||||||||||    
T  25685892 gaaagttagagggggaaaagtgcactttagcc 25685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 46637859 - 46637804
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg 268  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46637859 ttaattcaataattacacatgtggcatgccacgtaggcattgaccggtcaaaattg 46637804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 48780365 - 48780248
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| || ||||||||||||||||||||| ||| ||| |    
T  48780365 aaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggg 48780266  T
Q  372 gaaaaatgcactttagcc 389  Q
    ||||| ||||||||||||    
T  48780265 gaaaagtgcactttagcc 48780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 5525490 - 5525360
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| || |||||||||||||||||    
T  5525490 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagttttt 5525391  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| || |||| ||||||||| |||||||||    
T  5525390 gaaagtt-aggggggaaaaatgtactttagcc 5525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 389
Target Start/End: Original strand, 26421561 - 26421722
Alignment:
Q  227 acacacgtggcatgccacgtaggcattgaccggtc-aaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagttt 325  Q
    ||||||||||||||||||| |||| |||||   |  ||||||||  |||| ||||||| |||||| ||| |||| ||||  |||| ||||||||||||||    
T  26421561 acacacgtggcatgccacgcaggcgttgactattttaaaattgactaaaatgatcaaatttgcaatggg-ctaaatcttaaggggtcaaaattgtagttt 26421659  T
Q  326 ctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
     | ||||||||||| ||||||||||||||||| ||| || || | |||||| ||||||||||||    
T  26421660 ttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcc 26421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 37728535 - 37728662
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  ||||||||||||  |||||||  ||||| ||||   ||| |||||||||||||| | ||| ||||||||||||||||||| |||||    
T  37728535 ggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaacttttt 37728634  T
Q  358 aaaaattaagggagg-aaaaatgcacttta 386  Q
    |||| |||  ||||| ||||||||||||||    
T  37728635 aaaagtta--ggaggaaaaaatgcacttta 37728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 218 - 386
Target Start/End: Complemental strand, 1289269 - 1289100
Alignment:
Q  218 tcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 316  Q
    |||||||||| |||||||||||||||| || || ||||| |||||||||||||  ||||||| ||||  ||||| |||| ||| ||||  | ||| ||||    
T  1289269 tcaataattatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaa 1289170  T
Q  317 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||| |||||||||  |  ||||||| ||| | ||| ||| ||||||| |||||| | |||||||    
T  1289169 ttgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 44890952 - 44890878
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 90  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||   |||| ||| |||||||||||| ||||||    
T  44890952 tgagttgaagatgatgaagattcatgagtttgggtttgaatggaaga---agaaaaacatggaggagtatgtagaaga 44890878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 54108035 - 54107948
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaat 300  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||   |||| || ||||  |||||||||||||||    
T  54108035 ttaattcaataattacacacgtggcgtgccatgtaggcattgactggttaaaattggccaaaaagaccaaagatgcaaaggggctaat 54107948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 49308046 - 49308127
Alignment:
Q  307 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||| || |||| |||||| ||||||||||||    
T  49308046 gggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 49308127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 13386502 - 13386634
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||  |||| ||||| | ||||||| ||||   |||||| | || |||||||||||||||||    
T  13386502 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagttttt 13386601  T
Q  358 aaaaattaagggaggaaaaa-tgcactttagcc 389  Q
     ||| ||| ||| ||||||| ||||||||||||    
T  13386602 gaaagttagggggggaaaaagtgcactttagcc 13386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 8896835 - 8896940
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||| |||||||||||||||| ||||| ||||| |||||||||||||  |||| | |||| |||||||||||||||| ||||  ||| |    
T  8896835 ttaatttagtaattatacacgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaag-tcaatattgcaaaggggctaaatcttaagggac 8896933  T
Q  312 caaaatt 318  Q
    |||||||    
T  8896934 caaaatt 8896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 43242704 - 43242654
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaa 63  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  43242704 tgagttgaagatgatgaagaatcatgagtttgggtttgaatggaagaagaa 43242654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 13386147 - 13386014
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca-aaattgtagtttctatacttaggaggccaaaattgcaagt-tt 355  Q
    ||||||||||||| ||||||| |||| |||||| | |||||| |||| |||||  | ||||||| ||||   |||||||| |||||||||||||||| ||    
T  13386147 ggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagtttt 13386048  T
Q  356 ttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    || ||| |||  || |||||| ||||||||||||    
T  13386047 ttgaaagttagagggggaaaagtgcactttagcc 13386014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 8155914 - 8155741
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| ||| |||||||| ||||    |||||| ||||  |||| ||  |||  ||||||| |||||| |||| ||||||    
T  8155914 ttaattaattaattacacacgtggcctgctacgtaggcgttgaataagtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggc 8155815  T
Q  312 caaaattgtagtttctatacttaggag-gccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||||||| |  ||||||| | || |||||||||||||||| ||| |||  || |||||| |||||||||    
T  8155814 caaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 33296306 - 33296227
Alignment:
Q  306 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||| |||||||| |||||| |||||||||||| ||||||||  |||||||| |||||| |||||  ||||||||||||||    
T  33296306 ggggaccaaaattatagtttttatacttaggagaccaaaattataagtttttgaaaatt-agggaaaaaaaatgcacttta 33296227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 55603456 - 55603628
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||||||||||||| |||||   |||| |||| || ||||||||||| | ||||||  |  |||||||| | ||| |||||| ||||||    
T  55603456 ttaatttaataattacacacgtggcctgccatacaggcgttgatcgagtcaaaattgacataaaggactactattgcaaatgagcttattctt-gggggc 55603554  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||| ||||||| | |||  ||| |   |||||||||||||||| ||| ||||||| | |||| |||||||||    
T  55603555 caaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggg-gaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 50909348 - 50909273
Alignment:
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| ||||  ||||||| ||||||||||| ||||||||| ||| ||||  |||||| ||||||||||    
T  50909348 aaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttagggga-aaaaaatacactttagcc 50909273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 2193425 - 2193476
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 309  Q
    ||||||||||  | |||||||||||||||| |||||||||||||||| ||||    
T  2193425 ggtcaaaattagtcaaaaggatcaaaattgtaaaggggctaattcttagggg 2193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 389
Target Start/End: Original strand, 3928856 - 3928959
Alignment:
Q  286 tgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttt 385  Q
    ||||||||||||||  | | | ||||||||||||| ||||  |||| |||| ||||||||| ||||  |||| ||| ||| ||| |||||| ||||||||    
T  3928856 tgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 3928955  T
Q  386 agcc 389  Q
    ||||    
T  3928956 agcc 3928959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 381
Target Start/End: Original strand, 46638696 - 46638817
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||| |||| ||  ||| |||||||||| |||| |||| |||||| ||||||||| ||| | | | |||| |  ||||||| ||| |||||     
T  46638696 gtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttg 46638795  T
Q  359 aaaattaagggaggaaaaatgca 381  Q
    ||| |||| ||||||||||||||    
T  46638796 aaagttaa-ggaggaaaaatgca 46638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 51291421 - 51291475
Alignment:
Q  338 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccata 392  Q
    |||||||||||||| ||||||||| |||||||  ||||| || ||||||||||||    
T  51291421 ggccaaaattgcaactttttaaaacttaaggggtgaaaattggactttagccata 51291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 20919584 - 20919632
Alignment:
Q  341 caaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||| ||||||||| |||||||  ||||||||||||||||||    
T  20919584 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 20919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 50909438 - 50909386
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaa 265  Q
    |||||| |||||||||||||||||| |||||| |||  |||||| ||||||||    
T  50909438 ttaattaaataattacacacgtggcgtgccacatagatattgactggtcaaaa 50909386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 4e-49; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 39699694 - 39699868
Alignment:
Q  215 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 314  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |||||||| ||| |||||| |||||||| |||| |||||||||    
T  39699694 aattcaataattacacacatggcgtgccacgtaggcattgaccggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaa 39699793  T
Q  315 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||| |||||||| || |||||||||||||| || ||| || |||| |||||| |||||||||||||    
T  39699794 aattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagcca 39699868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 213 - 390
Target Start/End: Original strand, 36613828 - 36614006
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||| |||||||  ||| |||||||| |||||| |||| |||||     
T  36613828 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggt 36613927  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    |||||||||||||| | |||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  36613928 caaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcca 36614006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 39153041 - 39153214
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| |||| | ||| |    
T  39153041 ttaatttaataattacacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc 39153140  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | ||| || | |||||||||||||||||||| ||| ||||||| | |||| |||||||||    
T  39153141 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 45148756 - 45148580
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||   ||||||| ||||  |||||||||| ||| |||| ||||| |    
T  45148756 ttaatttaataattacacatgtggcatgccacgtaggctttgaccggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggc 45148657  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||| | |||||||| |||||||||||||||||||| ||| ||||| | | |||| |||||||||||||    
T  45148656 aaaattgtagttt-tttacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcca 45148580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 45149895 - 45150068
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggc 311  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||  |||||||||||||| |||| ||||||     
T  45149895 ttaatttaataattacacacgtggcattccacgtaggctttgaccggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttaggggggg 45149994  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||| |||| | |||||| | |||||||||||||||||||| ||| || |||| |||||| |||||||||    
T  45149995 caaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 225 - 389
Target Start/End: Complemental strand, 24422965 - 24422800
Alignment:
Q  225 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 323  Q
    ||||||||||||||||||||  |||| |||||   |||||||||||  |||||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  24422965 ttacacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagt 24422866  T
Q  324 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    || | |||||||| || ||||||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  24422865 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcc 24422800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 39152107 - 39151934
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| ||||   | | |    
T  39152107 ttaatttaataattacacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtc 39152008  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | ||| |||| |||||||||| ||||||||| ||| ||||||| | ||||||||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 222 - 389
Target Start/End: Complemental strand, 11436210 - 11436042
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| |||||||||||| ||||| ||||| |||||||||||||  ||||| | ||||  |||||| ||| ||| |||| |||||||||||||||    
T  11436210 taattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgt 11436111  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||| ||||||||  ||||||||||||||||||||| ||| |||| || |||||| ||||||||||||    
T  11436110 agtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcc 11436042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 217 - 389
Target Start/End: Complemental strand, 39698734 - 39698563
Alignment:
Q  217 ttcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 316  Q
    |||||||||||||||| | || ||||| ||||| |||||||||||||||||||  |||||||| ||| |||||| | |||||| |||| | || ||||||    
T  39698734 ttcaataattacacactttgcgtgccatgtaggtattgaccggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtgg-ccaaaa 39698636  T
Q  317 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    || |||||||| |||||||| ||||||||||| |||||||||||| ||||||| || ||| ||||||||||||    
T  39698635 ttatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 354
Target Start/End: Original strand, 44411891 - 44412032
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| ||||   |||      
T  44411891 ttaatttaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggt 44411990  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtt 354  Q
    ||||||||||||| | |||||||| | | |||||||||||||    
T  44411991 aaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 391
Target Start/End: Complemental strand, 51684497 - 51684364
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||   ||||||| ||||  |||||||||||||| |||| |||||||||||||||||||| ||||| |||| |||||||||||||| |||||    
T  51684497 ggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaacttttt 51684398  T
Q  358 aaaaattaagggaggaaaaatgcactttagccat 391  Q
    |||| ||||||| |||||| ||||||||||||||    
T  51684397 aaaagttaaggggggaaaagtgcactttagccat 51684364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 52275133 - 52274952
Alignment:
Q  225 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 323  Q
    |||||||| |||||||||||| |||| |||||   |||||||||||  |||||||||||| |||||| | |||||| |||| |||| |||||||||||||    
T  52275133 ttacacacttggcatgccacgcaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagt 52275034  T
Q  324 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccatatttgtattattat 405  Q
    || | |||||||| || ||||||||||||||||| ||| ||| ||| | |||| |||||||||||| |||| ||||||||||    
T  52275033 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagccttattagtattattat 52274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 218 - 389
Target Start/End: Original strand, 11437128 - 11437300
Alignment:
Q  218 tcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 316  Q
    |||||||||| |||||||||||||||| || || ||||| |||||||||||||  ||||||||||||  || ||| ||| ||| |||| |||||||||||    
T  11437128 tcaataattatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaa 11437227  T
Q  317 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| | |||||| | | |||||||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  11437228 ttgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 11437300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 44404618 - 44404474
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||  |||| || ||||  ||||||  |||||| | || |||||||    
T  44404618 ttaatttaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggcc 44404519  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||| |||||| | |||||||| ||| |||||||| |||||||    
T  44404518 aaaattatagtttttgtacttagggggctaaaattgctagttttt 44404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 14999457 - 14999285
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | | |||||    | | ||  |    
T  14999457 ttaattcattagttacacacatggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcagatgagctaa---atagaggatc 14999361  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| ||| || |||| |||||| | ||||||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcc 14999285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 50680508 - 50680335
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| ||| |||||||| ||||    |||||||||||  ||||||||||||  |||||||||| ||| |||| |||| |    
T  50680508 ttaattaattaattacacacgtggcctgctacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggac 50680409  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
     |||||| |||||| |||||||||| ||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  50680408 taaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaaggg-ggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 14999876 - 15000056
Alignment:
Q  213 ttaattcaataattacacacgtggc----atgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggg 308  Q
    |||||||| ||||||||||||||||    ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| || |||| | || ||     
T  14999876 ttaattcattaattacacacgtggctggcatgccacgtaggcattgacaggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggt 14999975  T
Q  309 ggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaa-tgcactttagcc 389  Q
    || ||  ||||||| || | |||||||| |  ||||||||||||||||||||| || |||||||||||| || |||||||||    
T  14999976 ggtcatgattgtagattttgtacttaggggatcaaaattgcaagtttttaaaagtt-agggaggaaaaagtgaactttagcc 15000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 37526802 - 37526975
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| | |||||||||| ||||    |||||||||||| |||| || ||||  |||||||||||||| |||| |||| |    
T  37526802 ttaattaattaattacacacgtggcctaccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatcttagggg-c 37526900  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||| ||| ||||||| |||||| | |||||||    
T  37526901 caaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 455 - 610
Target Start/End: Complemental strand, 20425083 - 20424927
Alignment:
Q  455 ggatttaaaacctctttggaaacctcgacaatagaggaacccaaaccacaccaagatggtggttcttgaatatagtccaagtatgctacggga-cactcc 553  Q
    ||||||||||||||||| ||||| |||||| | || ||  | |||||||||||| || |||| ||||||||||||||||||| || ||||  | ||||||    
T  20425083 ggatttaaaacctctttagaaacatcgacattggaagattctaaaccacaccaatatagtggatcttgaatatagtccaagtctgttacgacatcactcc 20424984  T
Q  554 agggaccaacaatgtgcatatcaagaaatttactactttgttggttttctctttgtt 610  Q
    | |||||||| ||| |||||||| ||||||| ||||| ||||||| |||||||||||    
T  20424983 aaggaccaacgatgcgcatatcaggaaatttgctactatgttggtcttctctttgtt 20424927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 242 - 389
Target Start/End: Original strand, 45157163 - 45157309
Alignment:
Q  242 cacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggcc 341  Q
    ||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| ||||   ||| |||||||||||||| | ||| |||| ||||    
T  45157163 cacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggcc 45157262  T
Q  342 aaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||||| ||| || |||| || ||| ||||||||||||    
T  45157263 aaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcc 45157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 395
Target Start/End: Original strand, 24426045 - 24426182
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  ||||| |||||| |||||| |||||||| |||| |||| | ||||||||||||| | |||||||| ||||||||||||||||||||    
T  24426045 ggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 24426144  T
Q  358 aaaaattaagggaggaaaaatgcactttagccatattt 395  Q
     ||| |||  || || ||| ||||||||| || |||||    
T  24426145 gaaagttagaggggggaaagtgcactttaaccttattt 24426182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 389
Target Start/End: Complemental strand, 35594383 - 35594217
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  || || ||||||  ||||||||||   ||||||| ||||  |||||||||||||| | || |||| | ||||||||    
T  35594383 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttaggggtc-aaaattgt 35594285  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  35594284 agttttaatacttagg-ggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 35594217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 35066973 - 35067103
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||  |||||||  |  |||||||||||||||| | || |||||||||||||||||||| | | | |||| ||||||||| |||| |||||     
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttg 35067072  T
Q  359 aaaattaagggaggaaaaatgcactttagcc 389  Q
    ||| ||||||| |||||| ||||||||||||    
T  35067073 aaacttaaggggggaaaagtgcactttagcc 35067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 213 - 386
Target Start/End: Original strand, 43378637 - 43378810
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    ||||||||||| |||||||||||||||||||| || || |||||  ||||||||| ||  |||||||| |||  |||||||| ||||| |||| || ||     
T  43378637 ttaattcaatatttacacacgtggcatgccacatatgcgttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggt 43378736  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||||||| ||| | |||||||| |  |||||||| |||||||| ||| ||||| || ||||| |||||||||    
T  43378737 caaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagaga-gaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 36613029 - 36612853
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| ||||||||| || ||||    || ||||||||  |||| || ||||  ||||||||| |||| |||| |||||     
T  36613029 ttaattaattaattacacacgtggcctgccacgtaagcgttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggt 36612930  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||||||||| | |||||| ||  |||||||||||| ||||| ||| ||||||| |||||||||||||||||||    
T  36612929 taaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 52276087 - 52276232
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || |||||| |||||||||||| | | || |||||  ||||||||||||| |||||||||||| |||||| |||||||| |||| |||| |    
T  52276087 ttaattcattatttacacgcgtggcatgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggac 52276186  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
     ||| || |||||| | |||||||| |||||||||| ||| |||||    
T  52276187 taaatttatagtttttgtacttagggggccaaaattacaaattttt 52276232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 41364959 - 41364828
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| |||| || |||| |||||| |||||||| |||| ||||| | ||||||| ||||   || ||||| ||||||||||||||||||||    
T  41364959 ggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagttttt 41364860  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
     ||| ||| |||| ||||| |||||||||||||    
T  41364859 gaaagttagggga-gaaaagtgcactttagcca 41364828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 226 - 389
Target Start/End: Complemental strand, 52827511 - 52827347
Alignment:
Q  226 tacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 324  Q
    |||||| |||||||||||  | ||| |||||  ||||||||||| | ||||||| |||| |||||| |||||||| |||| |||||   ||||||| |||    
T  52827511 tacacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggtt 52827412  T
Q  325 tctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |   |||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  52827411 ttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 52827347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 52828040 - 52828168
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   ||||||||  |||||||||||||||||||    
T  52828040 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagttttt 52828139  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     |||||||  || |||||| |||||||||    
T  52828140 gaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 213 - 390
Target Start/End: Original strand, 39222397 - 39222576
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||| ||||||| |||||||||||||| ||||    ||||||||||   |||| || ||||  |||||| |||| || |||| | ||||    
T  39222397 ttaattaattaattatacacgtgtcatgccacgtaggcgttgaataagtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggc 39222496  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatt-aagggaggaaaaatgcactttagcca 390  Q
     || |||||||||| |||||||||| |||||||||||||||||||| ||| || ||||| | |||| |||||||||||||    
T  39222497 taacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcca 39222576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 389
Target Start/End: Original strand, 35595125 - 35595294
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg- 319  Q
    ||||||||||||||||||||||  |  ||||||||  ||||||||||||  ||||||| ||||  |||||||||||||| ||||  |||||||||||||     
T  35595125 taattacacacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctt-aggggccaaaattgt 35595223  T
Q  320 tagtttctatacttaggaggccaaaattgc-aagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| ||||| |||| || ||||||||| |||||||| ||| |||  || |||||| | ||||||||||    
T  35595224 tagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcc 35595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 43058915 - 43058817
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||  ||||||||||||  || ||||||||||| |||| | |||| ||||||||||||| | |||||||| || |||||||||||||||||    
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 43058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 280 - 389
Target Start/End: Original strand, 23980458 - 23980567
Alignment:
Q  280 caaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatg 379  Q
    ||||| |||||||||||||| |||| || | |||||||| |||||| | ||||||||  ||||||||||||||||||| ||| |||  || |||||| ||    
T  23980458 caaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtg 23980557  T
Q  380 cactttagcc 389  Q
    ||||||||||    
T  23980558 cactttagcc 23980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 7983180 - 7983053
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  |||||||| ||| |||||| |||| ||| |||| ||||| ||||||||| ||||  |||| |||| ||||||||||||||||| ||    
T  7983180 ggtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgtt 7983081  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     ||| ||| |||| ||||| |||||||||    
T  7983080 gaaagttacggga-gaaaagtgcacttta 7983053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 46525730 - 46525827
Alignment:
Q  218 tcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaa 315  Q
    ||||||||||||||||||||||||||  || || |||||  ||||||||||||  ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  46525730 tcaataattacacacgtggcatgccaaataagcgttgacttggtcaaaattgaccaaaag-atcacaattgcaaaggggctaaatcttagggggccaaa 46525827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 7675457 - 7675546
Alignment:
Q  286 tgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaa 375  Q
    |||||||||||||| |||| ||||| ||||||| || ||| | ||||||||||| ||||||||||||||||| ||| |||| || |||||    
T  7675457 tgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaa 7675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 12389906 - 12390082
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || ||||||||||||||||||||  || | ||||  || ||||||| ||| |||||||  |  |||||||||||||||| ||| |||| ||    
T  12389906 ttaattcattatttacacacgtggcatgccacacagacgttgattgggtcaaaatagatcaaaaggactattattgcaaaggggctaaatctagggg-gc 12390004  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||| || ||| | ||| |||| |  |||||| |||| ||||| ||| ||||||  |||||||||||||||||||    
T  12390005 caaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 16281227 - 16281321
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 309  Q
    |||||||||||||||||||||  ||||| || |||||||||||| |||||||||||  ||||| || ||||  |||||||||| ||||| |||||||    
T  16281227 ttaattcaataattacacacg--gcatgtcaggtaggcattgacgggtcaaaattgggaaaaatgaccaaatatgcaaaggggttaatttttggggg 16281321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 16290270 - 16290093
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||| |||||||| || |  |||  ||||  ||||||||||  ||||| || ||||  || ||||||| ||||||||||| ||      
T  16290270 ttaattcaataattacacatgtggcatgtcatgatggcgctgactagtcaaaattggaaaaaatgaccaaatatgtaaaggggttaattcttgggaggtt 16290171  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 389  Q
    ||||||||||||| ||||| || | | |||||||||||| ||||| ||  ||| | || | |||||||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcc 16290093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 50681580 - 50681706
Alignment:
Q  260 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaa 359  Q
    ||||||||||| || |||| ||||  ||||||| |||||| ||    ||| |||| |||||||||| |||| ||||   ||||||||||||||||||| |    
T  50681580 tcaaaattgatcaataggaccaaagatgcaaagaggctaaatc----gggaccaatattgtagtttttatagttagagagccaaaattgcaagtttttga 50681675  T
Q  360 aaattaagggaggaaaaatgcactttagcca 390  Q
    |||||||| | |||||| |||||||||||||    
T  50681676 aaattaagaggggaaaagtgcactttagcca 50681706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 51685749 - 51685866
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| ||||  |||||||||||||| |||| ||||| |||||||||||||| | ||| |||  ||||||||| |||| ||||| ||| |||  || |    
T  51685749 aaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggg 51685848  T
Q  372 gaaaaatgcactttagcc 389  Q
    ||||| ||||||||||||    
T  51685849 gaaaagtgcactttagcc 51685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 367
Target Start/End: Complemental strand, 43377897 - 43377742
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||||| || ||||||||||||||||||||  | || |||||  ||||||||||||  ||||||||||||  || |||| | |||| | || || |||    
T  43377897 ttaattcattatttacacacgtggcatgccacacatgcgttgacttggtcaaaattgaccaaaaggatcaaaggtgtaaagagactaaattttaggaggc 43377798  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaag 367  Q
    ||||||| || ||| ||||||||   | | |||||||||||| |||||||||||||    
T  43377797 caaaattataatttttatacttaaaggactaaaattgcaagtgtttaaaaattaag 43377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 366
Target Start/End: Complemental strand, 40384874 - 40384748
Alignment:
Q  240 gccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggagg 339  Q
    ||||| ||| |||||| ||||||||||||   ||||||| ||||  ||||||| |||||| | || ||||  |||||||||||||| | ||| ||||||     
T  40384874 gccacatagacattgatcggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggaga 40384775  T
Q  340 ccaaaattgcaagtttttaaaaattaa 366  Q
    | |||||||||| ||||| ||||||||    
T  40384774 ctaaaattgcaactttttgaaaattaa 40384748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 245 - 386
Target Start/End: Complemental strand, 45156193 - 45156052
Alignment:
Q  245 gtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaa 344  Q
    |||| ||||||| ||||||||||||  |||| || ||||  | ||||| || ||| |||| | |||  ||||||||||||| | ||| ||| ||| ||||    
T  45156193 gtagacattgactggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaa 45156094  T
Q  345 attgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||| |||||||| ||| |||||||||||||| || ||||||    
T  45156093 attgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 21185264 - 21185208
Alignment:
Q  333 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||  |||| ||||||||| |||||||| ||||||||||||||||||    
T  21185264 taggaggccaaaagcgcaactttttaaaacttaagggatgaaaaatgcactttagcc 21185208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 33088243 - 33088099
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||| ||| | |||||||||| ||||||||| |||||||   |||||||  |||   ||||| ||||||| ||||  |||       
T  33088243 ttaatttaataattacacacgcggcgtaccacgtaggctttgaccggttaaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaat 33088144  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| |||| |||||||   |||||| |||||||||    
T  33088143 aaaattgtagtttttatatttaggagataaaaattacaagttttt 33088099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 41366101 - 41366231
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||| || | ||||||| |||| |||||| |||||||| |||| |||||| ||| |||| ||||  ||||||| | ||| ||||||||| ||||||    
T  41366101 ggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgttttt 41366199  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| ||| | | |||||| ||||||||||||    
T  41366200 gaaagttaggaggggaaaagtgcactttagcc 41366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 320
Target Start/End: Original strand, 14512547 - 14512654
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattg-ataaaaaggatcaaaattgcaaaggggctaattcttgggggg 310  Q
    |||||| | ||||||||||||||||||||||| ||||| |||||  |||||||||||  |||||||  |||  |||||||||||||||| || | ||||     
T  14512547 ttaatttagtaattacacacgtggcatgccacttaggcgttgactaggtcaaaattgcctaaaaag--tcactattgcaaaggggctaaatcatagggga 14512644  T
Q  311 ccaaaattgt 320  Q
    ||||||||||    
T  14512645 ccaaaattgt 14512654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 46524706 - 46524613
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaa 315  Q
    ||||||||||||||||||||||  || || |||||  |||||||||||   ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  46524706 taattacacacgtggcatgccaaataagcgttgacttggtcaaaattggccaaaag-atcacaattgcaaaggggctaaatcttagggggccaaa 46524613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 7674603 - 7674528
Alignment:
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | |||||||| | |||||||||||||||||||||| || |||| ||||||  |||||||||||    
T  7674603 caaaattgtagtttttgtacttagg-gcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcc 7674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 17505093 - 17505040
Alignment:
Q  257 cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggggg 310  Q
    ||||||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  17505093 cggtcaaaattgacaaaaaatatcaatattgcaaatgggctaattcttgggggg 17505040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 357
Target Start/End: Original strand, 33088609 - 33088686
Alignment:
Q  280 caaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||| ||||||||||||||| |||| ||| | |||||||||||||| | ||||||   || |||||||||||||||||    
T  33088609 caaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagttttt 33088686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 39221491 - 39221404
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaa 299  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||||||||||||    
T  39221491 ttaattaattaattacacacgtggcctgccacgtaggcgttgaattagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaa 39221404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 46312232 - 46312185
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattg 268  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  46312232 taattacacacgtggcatgccacctaggcgttgaccaggtcaaaattg 46312185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 11190434 - 11190385
Alignment:
Q  340 ccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||| ||||||||| |||||||  ||||| ||||||||||||    
T  11190434 ccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 21945763 - 21945708
Alignment:
Q  333 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||||||||||| ||||||||| |||| || |||||| | ||||||||||    
T  21945763 taggaggccaaaattgcaactttttaaaacttaaagg-ggaaaagtacactttagcc 21945708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 21946523 - 21946587
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaag 276  Q
    |||||| ||||||||||||||||||||| || ||| || |||| || ||||||||||| ||||||    
T  21946523 ttaatttaataattacacacgtggcatgtcatgtaagcgttgatcgagtcaaaattgaaaaaaag 21946587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 226 - 357
Target Start/End: Original strand, 43059943 - 43060075
Alignment:
Q  226 tacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 324  Q
    |||||| ||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||| | ||||| ||||  |||| |||||||||||||    
T  43059943 tacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtt 43060042  T
Q  325 tctatacttaggaggccaaaattgcaagttttt 357  Q
    | | |||||| | || ||||||| ||| |||||    
T  43060043 tttgtacttaaggggtcaaaatttcaaattttt 43060075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 213 - 391
Target Start/End: Complemental strand, 409 - 231
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||  ||||||||||||||||||| |||| ||    
T  409 ttaattcaataattacacacgtggcatgccacataggcgttgaccggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggacc 310  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccat 391  Q
    |||||| |||||| | ||| |||| | |||||||||||| ||||| ||| ||||||| || ||| ||||||||||||||    
T  309 aaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagccat 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 213 - 368
Target Start/End: Original strand, 903 - 1058
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||    
T  903 ttaattcaataattacacacgtggcatgccacgtaagcgttgaccggtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggcc 1002  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagg 368  Q
    |||||| |||||| | ||| || | | |||||||||||| ||||||||| ||||||    
T  1003 aaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 22629663 - 22629483
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | ||||||||||||||||| ||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||    
T  22629663 ttaattaattaattacacacgtggcaggccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggc 22629564  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga---ggaaaaatgcactttagcc 389  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||   |||||||||||||||||||    
T  22629563 caaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagcc 22629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 7500631 - 7500455
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | ||||||||||| |||| |||||||||||| ||||    |||||||||||  ||||||||||||  |||||||||||||| |||| ||||||    
T  7500631 ttaattaattaattacacacatggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggc 7500532  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| ||||||||||||||  |  ||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  7500531 caaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 7500455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 14999080 - 14999228
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| ||||||||||||  |||||||||||||| |||||||||||||||||||||   |||||| ||||  |||||||||||||| |||| ||| |||    
T  14999080 ttaatttaataattacacatatggcatgccacgtaagcattgaccggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgcc 14999179  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaa 361  Q
    ||||||||||||| | || ||||| || |||||||||||||||| ||||    
T  14999180 aaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa 14999228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 7501776 - 7501953
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||||||||||||||    |||||||||||  ||||||| ||||  |||||||||||||  ||||  |||||    
T  7501776 ttaattaattaattacacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggc 7501875  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||||||||    
T  7501876 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7501953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 11658556 - 11658379
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| |||||||||||||||||| |||||  ||||| ||||||| ||||||||||| | ||||||  |  ||| |||||||||||||||||| ||| |    
T  11658556 ttaatttaataattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattacaaaggggctaattcttgagggac 11658457  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| | ||| |||| ||| ||||||||| |||||| ||| ||||||| |||||| |||| |||||||    
T  11658456 caaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcc 11658379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 31659788 - 31659621
Alignment:
Q  225 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 323  Q
    ||||||||||||||||||||| | || |||||   |||||||||||  |||||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  31659788 ttacacacgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagt 31659689  T
Q  324 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggagg-aaaaatgcactttagcca 390  Q
    || | |||||||| || |||||||| |||||||| ||| ||| ||| || |||| |||||||||||||    
T  31659688 ttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcca 31659621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 18371592 - 18371423
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||| ||||||||| |||||||||||| ||||    |||||||||||  ||||||||||||  |||||| | ||||| |||| |||||||||||||||    
T  18371592 taattatacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgt 18371493  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||| | |||||| | |||||||||||||||||||| ||| ||| | | |||||| |||||||||||||    
T  18371492 agtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcca 18371423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 769589 - 769413
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||  | ||||||||||  ||||| ||||||||||||   ||||||||||||  |||||| ||| |||||||  ||| |||    
T  769589 ttaattaaataattacacacgtaacgtgccacgtagatattgatcggtcaaaattgggcaaaaggatcaaagatgcaaatgggttaattctaagggagcc 769490  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| || ||| | ||||||||| | ||||||||||||||||| |||||||  || |||||| ||||||||||||    
T  769489 aaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagcc 769413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 252 - 386
Target Start/End: Original strand, 11662515 - 11662649
Alignment:
Q  252 ttgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaa 351  Q
    ||||||| |||||||||| | ||||||  |  ||||||||||||||||||||||||||||||||||| |||||| | ||| |||   || ||||||||||    
T  11662515 ttgaccgatcaaaattgacataaaggactactattgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaa 11662614  T
Q  352 gtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    |||||| ||| ||||||| ||||||||||||||||    
T  11662615 gtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 213 - 365
Target Start/End: Original strand, 18372381 - 18372534
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | ||||||||||||||||| ||||| ||| | ||||    |||||||||||  ||||||| ||||  | |||||||||||| |||| ||||||    
T  18372381 ttaattaattaattacacacgtggcaggccacatagacgttgaataagtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggc 18372480  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta 365  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| |||||||    
T  18372481 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatta 18372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 34352711 - 34352887
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||   |||| ||| ||| ||||||   || ||| |||| | |||||    
T  34352711 ttaattcaataattacacacgtggcgtgtcacgtaggcattgaccggtcaaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggcc 34352810  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||||| | |||||| | | ||||||| | |||||||| |||||||  || | |||| ||||||||||||    
T  34352811 aaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcc 34352887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 226 - 386
Target Start/End: Original strand, 42886224 - 42886384
Alignment:
Q  226 tacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagttt 325  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||  |||| |||||||  |||||| ||||||| |||| |||||| |||||||||||||    
T  42886224 tacacacgtggcatgccacatagacattgatcggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagttt 42886323  T
Q  326 ctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
     | || ||||| || ||||||||||| ||||| ||| ||| | |  ||||| |||||||||    
T  42886324 ttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 31949453 - 31949322
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  31949453 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 31949354  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||| ||  |||||| ||||||||||||    
T  31949353 gaaaattagggagggaaaagtgcactttagcc 31949322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 34351664 - 34351524
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||    || ||  ||||||   |||||| ||||  ||||      
T  34351664 ttaattcaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattggtcaa----attaaggttgcaattaggctaaatcttaaggggtt 34351569  T
Q  313 aaaattgtagtttctatacttaggag-gccaaaattgcaagttttt 357  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  34351568 aaaattgtagtttctatactt-ggagagccaaaattgcaagttttt 34351524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 3227564 - 3227695
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||  | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  3227564 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227663  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| ||| ||| |||||| ||||||||||||    
T  3227664 gaaagttagggggggaaaagtgcactttagcc 3227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 258 - 390
Target Start/End: Original strand, 47525337 - 47525469
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||  ||||||||| ||| ||||||||||||||||    
T  47525337 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagttttt 47525436  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
     ||| |||  || |||||| |||||||||||||    
T  47525437 gaaagttagagggggaaaagtgcactttagcca 47525469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 14998145 - 14998048
Alignment:
Q  223 aattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgta 321  Q
    ||||||||||||||||||| | |||||||||||||| | ||||||||  ||||||| ||||  |||||||||||||| |||| ||||||||||||||||    
T  14998145 aattacacacgtggcatgc-atgtaggcattgaccgattaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 48934899 - 48935005
Alignment:
Q  284 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 383  Q
    |||||||| |||||||||||||||||  ||||||| |||||| | |||||||  || ||||||| ||||||||| ||| ||| ||| |||||||||||||    
T  48934899 attgcaaatgggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcact 48934998  T
Q  384 ttagcca 390  Q
    |||||||    
T  48934999 ttagcca 48935005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 33132032 - 33131956
Alignment:
Q  13 tgagatgaagatgatgaatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaag 92  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||    
T  33132032 tgagttgaagatgatgaagattcatgagtttgggtttgaatggaagaaga---agaatcttgaggagtatgaagaagaag 33131956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 31949772 - 31949903
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||  | ||||||| ||||   || ||||| ||||||||||||||||||||    
T  31949772 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagttttt 31949871  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| ||| ||| |||| | ||||||||||||    
T  31949872 gaaagttagggggggaagagtgcactttagcc 31949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 388
Target Start/End: Complemental strand, 3227238 - 3227109
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| ||||  |||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  3227238 ggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227139  T
Q  358 aaaaattaagggaggaaaaatgcactttagc 388  Q
     |||||| |||| || ||| |||||||||||    
T  3227138 gaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 226 - 387
Target Start/End: Complemental strand, 17781825 - 17781663
Alignment:
Q  226 tacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 324  Q
    |||||| |||||||||||  | ||| |||||  ||||||||||| | ||||||| |||| |||||| |||||||| |||| |||||   ||||||| |||    
T  17781825 tacacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggtt 17781726  T
Q  325 tctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 387  Q
    |   |||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||    
T  17781725 ttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 22630423 - 22630553
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||||  ||||||| ||||  | ||||| |||| | |||| |||||| ||||||||||||| | || ||||| ||||||||||||||||||||     
T  22630423 gtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttg 22630522  T
Q  359 aaaattaagggaggaaaaatgcactttagcc 389  Q
    ||| ||| ||  |||||| ||||||||||||    
T  22630523 aaagttatggagggaaaagtgcactttagcc 22630553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 47369958 - 47369781
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||||||||| |||||| ||||| ||||    |||||||||||  ||||  |  |||  |||||||||||||| ||||  |||||    
T  47369958 ttaattaattaattacacacgtggcctgccacataggcgttgaataagtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggc 47369859  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||| |||||| | |||||| ||||| |||||||||||||||| ||| ||| ||||  |||| |||| |||||||    
T  47369858 caaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcc 47369781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 318
Target Start/End: Original strand, 770693 - 770791
Alignment:
Q  220 aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaatt 318  Q
    |||||||||| ||||| |   |||||||| ||||||||||||||||||||  |||| |||||||  |||||||||||||| | || |||||||||||||    
T  770693 aataattacatacgtgactgaccacgtagacattgaccggtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 389
Target Start/End: Complemental strand, 127466 - 127337
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | ||||||| |||| ||||||  ||||||| |||| ||||| | ||||||| ||||   |||||||| | ||||||||||||||||||    
T  127466 ggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttaggggg-ctaaattgtggttttggtacttaggggaccaaaattgcaagttttt 127368  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| || |||| |||||| ||||||||||||    
T  127367 gaaagtt-aggggggaaaagtgcactttagcc 127337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 361
Target Start/End: Complemental strand, 6618374 - 6618235
Alignment:
Q  223 aattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgta 321  Q
    ||||||||| |||||||||||| ||||| |||||  ||||||||||||| |||| ||||||| |||||| | ||| || |||| ||| | ||||||||||    
T  6618374 aattacacatgtggcatgccacataggcgttgactaggtcaaaattgatcaaaatgatcaaatttgcaatgaggcaaaatcttagggagtcaaaattgta 6618275  T
Q  322 gtttctatacttaggaggccaaaattgcaagtttttaaaa 361  Q
     ||| |||| ||| |    |||||||||||||||| ||||    
T  6618274 atttttatatttaaggaatcaaaattgcaagttttgaaaa 6618235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 387
Target Start/End: Complemental strand, 46482774 - 46482599
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | ||||||||||| |||| |||||||||||||||||    |||||||||||  |||||||| |||| |||||||| | ||| |||| ||||      
T  46482774 ttaattaattaattacacacatggcttgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggat 46482675  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 387  Q
     |||||| |||||| | ||| |||| || |||| || ||| ||||| ||||||| | |  ||||||||||||||||    
T  46482674 taaaattatagtttttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttag 46482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 128571 - 128699
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||| | |||||| ||||| |||||| |||||| | |||| ||||| | ||||||| ||||   |||||||| || ||||||||||| |||||    
T  128571 ggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaattttt 128670  T
Q  358 aaaaattaagggaggaaaaatgcacttta 386  Q
     ||| ||| ||  |||||| |||||||||    
T  128671 gaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 17782558 - 17782654
Alignment:
Q  293 gggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||| |||| ||||| | ||||||| ||||   |||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 17782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 32253352 - 32253458
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||| |||  |||| |||||||||| ||||||||||||||||||    ||||||| ||||  ||||||||| |||| |||| || || |    
T  32253352 ttaattaaataattatacagatggcgtgccacgtagacattgaccggtcaaaatttgccaaaaggaccaaagatgcaaagggactaaatcttaggtggtc 32253451  T
Q  313 aaaattg 319  Q
    |||||||    
T  32253452 aaaattg 32253458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 394
Target Start/End: Complemental strand, 43899525 - 43899443
Alignment:
Q  310 gccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccatatt 394  Q
    |||||||||||| ||| |||| |||| ||  ||||||||||||||||| ||| ||||||||  ||||||| ||||||||| ||||    
T  43899525 gccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagttaaggga--aaaaatgtactttagccctatt 43899443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 33131921 - 33131885
Alignment:
Q  97 ttgatgagtgattttaattggatgatttgattttaaa 133  Q
    ||||||| |||||||||||||||||||||||||||||    
T  33131921 ttgatgaatgattttaattggatgatttgattttaaa 33131885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 21505531 - 21505416
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    ||||||| ||||  |||||||||||||| ||||  |||| |||||||||||||| | ||  | || ||||||||| |||| ||||| ||| |||  || |    
T  21505531 aaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggg 21505434  T
Q  372 gaaaaatgcactttagcc 389  Q
    ||||| ||||||||||||    
T  21505433 gaaaagtgcactttagcc 21505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 317 - 389
Target Start/End: Original strand, 20163585 - 20163657
Alignment:
Q  317 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||| | ||| ||||  ||||||||||||||||||| ||| ||| ||| ||| || ||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcc 20163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 19665 - 19488
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 311  Q
    |||||| | |||||||||| ||||| |||||||||||| ||||    |||||||||||  |||| |||||||  |||||||||| ||| |||| ||||      
T  19665 ttaattaattaattacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggat 19566  T
Q  312 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  19565 caaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcc 19488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 370
Target Start/End: Complemental strand, 3851 - 3694
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||  |||| ||| ||| |||||| | |||||| |||| |||| |     
T  3851 ttaattaaataattacacacgtggcgtgccacgtaggcattgaccagtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggggact 3752  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga 370  Q
    |||||| |||||||| |||| ||| |||||||||||||||||||| ||| ||| ||||    
T  3751 aaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagttagggga 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 213 - 388
Target Start/End: Original strand, 4655 - 4829
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||||  |||||||| || |||| |||||||||||||| |||||||||||| | |||||||| ||| |||||| ||||||||   || | ||| |    
T  4655 ttaattcaatcgttacacacatgacatgtcacgtaggcattgatcggtcaaaattggtcaaaaggattaaagttgcaatggggctaaaatttagagggtc 4754  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 388  Q
    ||||||||||||||| || ||||| ||||||||||||| |||||||||| || ||||||| ||| |||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcactttagc 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 3233 - 3408
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||||| |||| ||||| ||||||||| ||||||||||||||| || |||||||  ||||||||||||| ||||||||||||||| |||| |||| ||    
T  3233 ttaattcattaataacacatgtggcatgctacgtaggcattgaccagtaaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggacc 3332  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    |||||| |||||| | ||| || | || |||||||| ||||||||  ||| |||||| |||||| ||||||||||||    
T  3333 aaaattatagtttttgtacctatggggtcaaaattgtaagttttt-gaaagtaaggggggaaaagtgcactttagcc 3408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 61429 - 61559
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  ||||||| ||||  |||||| ||||||| || | ||||||||||||| |||||| | |||||||| ||| ||||||||||||||||    
T  61429 ggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagttttt 61528  T
Q  358 aaaaattaagggaggaaaaatgcactttagc 388  Q
     |||||||||||||||||| |||||||||||    
T  61529 gaaaattaagggaggaaaagtgcactttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 60221 - 60089
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  |||| || ||||  |||||||||||||| || | ||||| |||||||||||||| ||||| |||| || |||||||||||||||||    
T  60221 ggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagttttt 60122  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
    |||| |||  ||||||||| |||||||||||||    
T  60121 aaaagttagaggaggaaaagtgcactttagcca 60089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 5408 - 5539
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||| |  |||||||||||| ||| || |||||||| ||||  |||| |||||||||||||| | |||||| | || |||||||||||||||||    
T  5408 ggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 5507  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||||||| ||| |||||| ||||||||||||    
T  5508 gaaaattagggggggaaaagtgcactttagcc 5539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 49109 - 49186
Alignment:
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcca 49186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 389
Target Start/End: Complemental strand, 1607 - 1439
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    |||||||||| |||||||||||  |  ||||||||  ||||||||||||  ||||||| ||||  |||||| ||||||| |||| ||||| ||||||| |    
T  1607 taattacacatgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattat 1508  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||| ||||| |||| || ||||||||||||||||| ||| |||  || |||||| | ||||||||||    
T  1507 agtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcc 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 389
Target Start/End: Original strand, 49403 - 49534
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    |||||||||||   ||||||| |||| ||||||||| ||||| |||| ||||| |||||||||||||| |||   |||| |||||||||||||| |||||    
T  49403 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 49502  T
Q  358 aaaaattaagggaggaaaaatgcactttagcc 389  Q
     ||| |||||||  ||||| ||||||||||||    
T  49503 taaagttaaggggagaaaagtgcactttagcc 49534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 39395 - 39344
Alignment:
Q  338 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 389  Q
    ||||||||||| || ||||||||| ||||||| |||||| ||||||||||||    
T  39395 ggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 39344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 222 - 387
Target Start/End: Complemental strand, 18896 - 18730
Alignment:
Q  222 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 320  Q
    ||||||||||||||||||||||  |  || ||||| ||| |||||||| ||||||||| ||  |||| ||||||| |||||||| || || |||||||||    
T  18896 taattacacacgtggcatgccaaatcagcgttgactcggccaaaattgctaaaaaggaccactattgtaaaggggttaattcttaggaggtcaaaattgt 18797  T
Q  321 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 387  Q
    ||||| | | | ||||||| |||||| |||| ||||||||| ||||| | | |||| ||||||||||    
T  18796 agtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 7399 - 7516
Alignment:
Q  272 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 371  Q
    |||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||| ||| |||| || |||||| | || ||||| ||| |||  || |    
T  7399 aaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggg 7498  T
Q  372 gaaaaatgcactttagcc 389  Q
    || || ||||||||||||    
T  7499 gacaagtgcactttagcc 7516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 37278 - 37147
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  |||| ||| ||| || ||| |||||||| || | ||||||||||||||| |||| | |||||||| || ||||||||||| |||||    
T  37278 ggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T
Q  358 aaaaattaagggaggaaaaatgcactttagcca 390  Q
     ||||   |||| |||||| |||||||||||||    
T  37178 taaaagataggg-ggaaaagtgcactttagcca 37147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 386
Target Start/End: Complemental strand, 6509 - 6346
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    |||||| |||||||||| |||||| | ||||||||| ||||||||||||||||          ||| ||||  ||||||  |||||| |||| ||||| |    
T  6509 ttaattaaataattacatacgtgggacgccacgtagacattgaccggtcaaaa----------ggaccaaagatgcaaaaaggctaaatcttagggggtc 6420  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 386  Q
    ||||||||||||| | ||| |||| ||| ||||| | || ||||| ||| ||||||| |||||| |||||||||    
T  6419 aaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 8998 - 9126
Alignment:
Q  259 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 358  Q
    |||||||||| | ||||||||||||  ||||   ||||||| |||| |||| ||||||||||||||| | ||| |||||||| |||||  ||| |||||     
T  8998 gtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatcttagggg-ccaaaattgtagtttttgtacataggaggcaaaaatcacaacttttt- 9095  T
Q  359 aaaattaagggaggaaaaa-tgcactttagcc 389  Q
     ||||||| |||||||||| ||||||||||||    
T  9096 gaaattaa-ggaggaaaaagtgcactttagcc 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 23255 - 23080
Alignment:
Q  213 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 312  Q
    ||||||||| ||| | ||||||||| |  ||| ||||| |||||| |||||||||||  |||| ||| ||| |||||| ||||||||  ||| ||||  |    
T  23255 ttaattcaacaatcatacacgtggcgtatcacataggctttgaccagtcaaaattgagcaaaatgataaaatttgcaatggggctaaagcttaggggagc 23156  T
Q  313 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    || ||||| ||||   |||||||  || ||||||||||||||||| ||| |||  || |||||| |||||||||||||    
T  23155 aagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcca 23080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 2435 - 2564
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  |||||||| ||| |||||| |  ||||| || | |||||||||||| || |||| | |||||||| || |||||||||||||||||    
T  2435 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 2534  T
Q  358 aaaaattaagggaggaaaaatgcactttagc 388  Q
      ||| | |||| |||||| |||||||||||    
T  2535 tgaaagttaggg-ggaaaagtgcactttagc 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 7058 - 7187
Alignment:
Q  258 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 357  Q
    ||||||||||||  |||||||| ||| |||||| |  ||||| || | |||||||||||| || |||| | |||||||| || |||||||||||||||||    
T  7058 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 7157  T
Q  358 aaaaattaagggaggaaaaatgcactttagc 388  Q
      ||| | |||| |||||| |||||||||||    
T  7158 tgaaagttaggg-ggaaaagtgcactttagc 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 137 - 221
Alignment:
Q  306 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 390  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||| ||| ||| ||| |||||| |||||||||||||    
T  137 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcca 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University