View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2723_high_19 (Length: 286)
Name: NF2723_high_19
Description: NF2723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2723_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 18103459 - 18103203
Alignment:
| Q |
13 |
aaaataaaactttacaggtgtccttgatgtaactgagacaatggcctagatgttaatttgacaaaaccaagcaaaaccaaatatgtgttcattaaaactc |
112 |
Q |
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| T |
18103459 |
aaaataaaactttacgggtgtccttgatgtaactgagacaatggcctagatgttaatttgacaaaaccaagcaaaaccaaatatgtgttcattaaaactc |
18103360 |
T |
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| Q |
113 |
agctcgtatttgtttttgtcaaaccggtacttatcgggtgactttctcggtatcggaaacaaatataagtgaacataagcttcaaaagaaatacacatat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
18103359 |
agctcgtatttgtttttgtcaaaccggtacttatcgggtgactttctcggtatcggaaacaaatataagtgaacatatgcttcaaaagaaatacacatat |
18103260 |
T |
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| Q |
213 |
cgttgctgttttagccaattttaagtactagtctatggtgaaagtggttcaccacta |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
18103259 |
cgttgctgttttagccaattttaagtactagtctatggtggaagtggttcaccacta |
18103203 |
T |
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