View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2723_high_3 (Length: 644)

Name: NF2723_high_3
Description: NF2723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2723_high_3
NF2723_high_3
[»] chr6 (11 HSPs)
chr6 (11-626)||(14830030-14830649)
chr6 (13-230)||(14153392-14153609)
chr6 (11-260)||(16444276-16444524)
chr6 (64-155)||(14154482-14154573)
chr6 (27-93)||(14154377-14154443)
chr6 (11-104)||(35053467-35053564)
chr6 (190-267)||(4321738-4321815)
chr6 (184-274)||(17436535-17436625)
chr6 (190-268)||(35060895-35060973)
chr6 (195-270)||(806543-806618)
chr6 (107-143)||(14154443-14154479)
[»] chr3 (24 HSPs)
chr3 (12-268)||(35485243-35485501)
chr3 (19-268)||(16967808-16968061)
chr3 (11-203)||(53824355-53824549)
chr3 (11-269)||(42947374-42947622)
chr3 (11-273)||(42387748-42388010)
chr3 (11-149)||(2325432-2325570)
chr3 (19-149)||(42993635-42993763)
chr3 (11-110)||(44833583-44833682)
chr3 (130-267)||(42993567-42993704)
chr3 (192-270)||(44836480-44836558)
chr3 (190-268)||(53827661-53827739)
chr3 (128-271)||(2325498-2325642)
chr3 (190-270)||(42381613-42381693)
chr3 (195-274)||(39688757-39688836)
chr3 (195-239)||(30533883-30533927)
chr3 (190-271)||(19866730-19866811)
chr3 (195-276)||(26998292-26998373)
chr3 (195-227)||(54528961-54528993)
chr3 (64-151)||(47068202-47068288)
chr3 (190-268)||(6162682-6162760)
chr3 (130-199)||(47068217-47068286)
chr3 (184-269)||(53814555-53814640)
chr3 (190-270)||(16931444-16931524)
chr3 (17-70)||(25574862-25574917)
[»] chr2 (14 HSPs)
chr2 (11-269)||(22495894-22496155)
chr2 (16-271)||(42121818-42122073)
chr2 (11-265)||(11712961-11713215)
chr2 (11-268)||(18394792-18395048)
chr2 (130-273)||(12967265-12967409)
chr2 (11-149)||(12967340-12967477)
chr2 (130-271)||(37891619-37891760)
chr2 (134-268)||(2154262-2154397)
chr2 (190-269)||(25678271-25678350)
chr2 (187-270)||(31133177-31133260)
chr2 (196-268)||(30760154-30760226)
chr2 (64-151)||(2154329-2154416)
chr2 (192-230)||(42119195-42119233)
chr2 (190-267)||(12969264-12969340)
[»] chr1 (12 HSPs)
chr1 (11-268)||(39650196-39650455)
chr1 (11-203)||(47485451-47485646)
chr1 (11-131)||(50065600-50065720)
chr1 (130-230)||(45690987-45691088)
chr1 (193-268)||(3792560-3792635)
chr1 (187-269)||(28475979-28476061)
chr1 (190-268)||(47489027-47489105)
chr1 (195-272)||(42883759-42883836)
chr1 (193-268)||(50069237-50069312)
chr1 (186-270)||(3792449-3792534)
chr1 (195-268)||(5119036-5119109)
chr1 (184-269)||(33617643-33617728)
[»] chr4 (24 HSPs)
chr4 (11-269)||(28796619-28796878)
chr4 (11-231)||(47043809-47044030)
chr4 (11-245)||(53265815-53266049)
chr4 (11-230)||(33161668-33161886)
chr4 (27-155)||(42099394-42099522)
chr4 (11-144)||(12572490-12572624)
chr4 (27-181)||(887036-887191)
chr4 (11-239)||(46813884-46814110)
chr4 (11-245)||(36174400-36174634)
chr4 (188-268)||(46817430-46817510)
chr4 (192-271)||(28798147-28798226)
chr4 (108-265)||(40312710-40312869)
chr4 (108-265)||(40322786-40322945)
chr4 (190-268)||(24972390-24972468)
chr4 (190-268)||(33164505-33164583)
chr4 (195-268)||(55523725-55523798)
chr4 (190-268)||(36172165-36172243)
chr4 (191-268)||(12572820-12572897)
chr4 (195-268)||(40450931-40451004)
chr4 (184-268)||(55527907-55527991)
chr4 (11-75)||(1227928-1227994)
chr4 (190-261)||(42099526-42099597)
chr4 (184-230)||(24974140-24974186)
chr4 (182-239)||(27992296-27992353)
[»] chr5 (24 HSPs)
chr5 (11-230)||(1974194-1974413)
chr5 (11-268)||(40017173-40017433)
chr5 (11-226)||(3461404-3461620)
chr5 (27-143)||(1975118-1975235)
chr5 (11-245)||(19401820-19402054)
chr5 (57-149)||(6270696-6270789)
chr5 (19-106)||(6270771-6270858)
chr5 (95-165)||(19401907-19401976)
chr5 (190-268)||(1975302-1975380)
chr5 (190-268)||(3458014-3458092)
chr5 (190-268)||(40008712-40008790)
chr5 (182-271)||(1145138-1145227)
chr5 (12-85)||(4846835-4846908)
chr5 (213-268)||(6269236-6269291)
chr5 (184-268)||(34016002-34016086)
chr5 (184-262)||(6706029-6706107)
chr5 (196-230)||(17644606-17644640)
chr5 (187-269)||(28677885-28677967)
chr5 (187-268)||(34017616-34017697)
chr5 (183-268)||(36580223-36580308)
chr5 (195-267)||(7335534-7335606)
chr5 (184-244)||(11135765-11135825)
chr5 (17-70)||(28784766-28784821)
chr5 (195-243)||(33037386-33037434)
[»] chr7 (22 HSPs)
chr7 (11-268)||(1537066-1537324)
chr7 (11-203)||(48211845-48212037)
chr7 (11-269)||(26502251-26502510)
chr7 (11-269)||(26590204-26590463)
chr7 (29-181)||(31826066-31826215)
chr7 (11-155)||(38790965-38791104)
chr7 (51-155)||(46302321-46302425)
chr7 (191-269)||(38790883-38790962)
chr7 (130-268)||(30362817-30362955)
chr7 (130-198)||(31826114-31826182)
chr7 (210-268)||(31853291-31853349)
chr7 (130-199)||(38790971-38791040)
chr7 (190-270)||(31823587-31823667)
chr7 (185-265)||(38047649-38047729)
chr7 (64-151)||(30362802-30362888)
chr7 (190-245)||(38792048-38792103)
chr7 (184-230)||(5166-5212)
chr7 (192-230)||(48221700-48221738)
chr7 (213-274)||(41800049-41800110)
chr7 (128-245)||(41957024-41957141)
chr7 (184-268)||(19365389-19365473)
chr7 (184-264)||(38386178-38386258)
[»] chr8 (14 HSPs)
chr8 (11-156)||(28703954-28704100)
chr8 (82-236)||(43635162-43635316)
chr8 (130-268)||(4640735-4640873)
chr8 (196-269)||(35841396-35841469)
chr8 (185-268)||(33220782-33220865)
chr8 (77-151)||(4640733-4640806)
chr8 (190-268)||(33800498-33800576)
chr8 (184-268)||(34279555-34279639)
chr8 (195-270)||(24897975-24898050)
chr8 (64-151)||(37686683-37686769)
chr8 (18-60)||(43635317-43635359)
chr8 (184-269)||(5967231-5967316)
chr8 (130-199)||(37686685-37686754)
chr8 (11-43)||(4639839-4639871)
[»] scaffold1455 (1 HSPs)
scaffold1455 (11-230)||(195-413)
[»] scaffold0024 (3 HSPs)
scaffold0024 (455-573)||(117503-117625)
scaffold0024 (465-582)||(117979-118105)
scaffold0024 (360-406)||(117821-117868)
[»] scaffold0016 (1 HSPs)
scaffold0016 (77-230)||(69761-69912)
[»] scaffold1063 (1 HSPs)
scaffold1063 (190-268)||(1475-1553)
[»] scaffold0163 (1 HSPs)
scaffold0163 (205-271)||(35773-35839)


Alignment Details
Target: chr6 (Bit Score: 465; Significance: 0; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 11 - 626
Target Start/End: Complemental strand, 14830649 - 14830030
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  14830649 cacagaccaaaacacgtttgttcttcagttctgcaccggccaactggcgcgagttaactcacgctcagaatacactagcgcaagttaaatcacgctacgt 14830550  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
      |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14830549 ttcttaacttaggtaagaaaatacactagcgcatgttaagtcacgtagcgtgacttaacataggtaaaaaatacactagcgcatgttaacatgtgtaggg 14830450  T
Q  211 gtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaaaacaacgaaaatcgagctcagatccaatacaactttag 310  Q
      ||||||||||||||||||   |||||| || |||||||   |||| | || ||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  14830449 acattttggacatttactttgggaatgagcgatactgtttgagtaataaacataattcttaaaacaacgaaagtcgagctgagatccaatacaaatttag 14830350  T
Q  311 tcaaatgaagac-aaataatatgaggctttataagaggcctaacgaaggaggcttttcaatttgaggtatttttacagctctaaacctaacacaaactcc 409  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||     
T  14830349 tcaaatgaagacaaaataatatgaggctttataagaggcctaacgaggggggcttttcaatttgaggtatttttacagctctaaacctaacacaaactcg 14830250  T
Q  410 aa-gaccttgcggcgccgtttgaaatttcatcacactcggtatcattgttatctcccatttacagagaattgataatttgatatttcattatctatctat 508  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14830249 aaggaccttgcggcgccgtttgaaatttcatcacactcggtatcattgttatctcccatttacagagaattgataatttgatatttcattatctatctat 14830150  T
Q  509 ttatcactattagatgtttaagatatatt--cacacacactcataaatttttgttgaacgacacacagatatacttcaaataactgaatttatcatgatg 606  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14830149 ttatcactattagatgtttaagatatattcacacacacactcataaatttttgttgaacgacacacatatatacttcaaataactgaatttatcatgatg 14830050  T
Q  607 atattttagggagggtgcat 626  Q
    ||||||||||||||||||||    
T  14830049 atattttagggagggtgcat 14830030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 14153609 - 14153392
Alignment:
Q  13 cagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtga 112  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  14153609 cagaccaaaaaacgtttgttcttcagttctgcaccggccaactagcgcgagttaactcacgctcagactacactagcgcaacttaagtcacgctacgtga 14153510  T
Q  113 cttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggt 212  Q
    |||| |||| || | ||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  14153509 cttagcttaagttaaaaaatacactagcgcatgttaagtcacgtagcgcgactaaacataggtaaaaaatacactagcgcatgttaacatgcgtaggggt 14153410  T
Q  213 attttggacatttacttt 230  Q
    ||||||| ||||||||||    
T  14153409 attttggtcatttacttt 14153392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 16444524 - 16444276
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||||||| |||||  |||||||||||||||||||||| |||||| ||| ||||||||||| ||||| || ||||||| |||| ||||||||||   | |    
T  16444524 cacagaccgaaaaatgtttgttcttcagttctgcaccggccaactagcgtgagttaactcacgctcaaaa-acactagtgcaagttaagtcacgtagctt 16444426  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
       |||||||| |    |||||||| ||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||||||||||||||| | ||||    
T  16444425 aggttaacttacgctc-aaaatacattagcgcatgttaagtcatgtagcgtaacttaacataggtaaaaaatacactagcgcatgttaacatgcgcaggg 16444327  T
Q  211 gtattttggaca-tttactttaaaaatgagtgaaactgtttagataatgag 260  Q
    | |||||||| | ||||||||| |||||||||| ||||||| | |||||||    
T  16444326 gcattttggatattttactttagaaatgagtgatactgtttgggtaatgag 16444276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 14154482 - 14154573
Alignment:
Q  64 ttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagtcacg 155  Q
    |||||||| |||||||||||||||| |||| ||||||||| |||||||||||||||||||| | ||||||||||| ||||  ||||||||||    
T  14154482 ttaactcacgctcagaatacactagtgcaacttaagtcacactacgtgacttaacttaggttaaaaaatacactaacgcaacttaagtcacg 14154573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 14154377 - 14154443
Alignment:
Q  27 tttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaa 93  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| ||||    
T  14154377 tttgttcttcagttctgcaccggccaactggtgcgagttaactcacgctcagaatacactagtgcaa 14154443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 35053564 - 35053467
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcg----cgagttaactcatgctcagaatacactagcgcaaattaagtcacg 104  Q
    |||||||||| |||| |||||||||||||||||||  | |||||| ||     |||||||||||| ||||||||||||||||||||| ||||||||||    
T  35053564 cacagaccaacaaacgtttgttcttcagttctgcattggccaactagcatgatcgagttaactcacgctcagaatacactagcgcaagttaagtcacg 35053467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 4321738 - 4321815
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaatt 267  Q
    ||||||||||| || |||| || ||||||  |||||||||| |||||||| |||||| ||||| ||||||||||||||    
T  4321738 cgcatgttaacttgcgtagaggcattttgatcatttactttgaaaatgagcgaaactatttaggtaatgagcagaatt 4321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 17436535 - 17436625
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaaaa 274  Q
    |||||||||||||||||||||||||||  |||| || ||||||||||   || ||| ||| |  ||| | |||||||||||||||||||||    
T  17436535 cactagcgcatgttaacatgtgtagggacatttcggtcatttactttgggaacgagcgaatccatttgggtaatgagcagaattcttaaaa 17436625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 35060895 - 35060973
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| ||||||| ||||||||||||||||||  ||||||| | ||   ||| | |||||||||||||||    
T  35060895 cgcatgttaacatgcgtaggggcattttggacatttactttggaaatgagcggaatcatttgggtaatgagcagaattc 35060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 806618 - 806543
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    ||||||||  ||||| ||||||| |||||||||||| | ||||||  ||||||||| | ||| |||||||||||||    
T  806618 gttaacatacgtaggagtattttagacatttactttgagaatgagcaaaactgtttgggtaaagagcagaattctt 806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 14154443 - 14154479
Alignment:
Q  107 acgtgacttaacttaggtaataaaatacactagcgca 143  Q
    |||||||||||||||||| | ||||||||||||||||    
T  14154443 acgtgacttaacttaggttaaaaaatacactagcgca 14154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 1e-89; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 35485501 - 35485243
Alignment:
Q  12 acagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtg 111  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||     
T  35485501 acagaccaaaaaacgtttgttctttagttctgcaccgaccaactggcgcgagttaactcacgctcagaatacactagcgcaggttaagtcacgctacgta 35485402  T
Q  112 acttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatag--ataaaaaatacactagcgcatgttaacatgtgtagg 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||  | |||||||| ||||||||||||||||||||| |||    
T  35485401 acttaacttaggtaaaaaaatacactagcgcatgttaagtcacgtaacgtgacttaacataggtaaaaaaaatatactagcgcatgttaacatgtgcagg 35485302  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    || |||||  ||||||||||||| |||||| || ||||||| |||||||||||||||||    
T  35485301 ggcattttaaacatttactttaagaatgagcgatactgtttggataatgagcagaattc 35485243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 16967808 - 16968061
Alignment:
Q  19 aaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaac 118  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16967808 aaaaaacgtttgttcttcagttctgcaccggccaactggcgcgagttaactcacgctcagaatacactagcgcaaattaagtcacgctacgtgacttaac 16967907  T
Q  119 ttaggt--aataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatag---ataaaaaatacactagcgcatgttaacatgtgtaggggta 213  Q
    ||||||  || ||||||||||||||||||||||||||||||| |||||| |||||||   | ||||||||||||||  |||||||||||  |||||||||    
T  16967908 ttaggtaaaaaaaaatacactagcgcatgttaagtcacgtagcgtgacttaacataggtaaaaaaaaatacactag-acatgttaacatacgtaggggta 16968006  T
Q  214 ttttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||| |||||||| ||||  ||||||||| || |||||  |||||||||||||||    
T  16968007 ttttagacatttattttaggaatgagtgatacggtttaagtaatgagcagaattc 16968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 53824549 - 53824355
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  53824549 cacaaaccaaaaaacgtttgttcttcagttctgcaccggccaactggcgcgagttaactcacgctcagaatacactagcgcaacttaagtcacgctacgt 53824450  T
Q  111 gacttaacttaggt--aataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatg 203  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||||||    
T  53824449 gacttaacttaggtaaaaaaaaatacactagcgcatgttaagtcacgtagcgtgacttaacataggtaaaaattacactagcgcatgttaacatg 53824355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 42947622 - 42947374
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||| |||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||| |||          |||    
T  42947622 cacataccaaaaaacgtttgttcttcagttctgcaccggccaactagcgtgagttaactcacgctcagaatacactagcgcaagtta----------cgt 42947533  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaataca-ctagcgcatgttaacatgtgtagg 209  Q
    |||||||||||||||| |||||||||||||||||||||| ||| |||| |||||| ||||||  || | | |||| |||||||||||||||||| |||||    
T  42947532 gacttaacttaggtaa-aaaatacactagcgcatgttaaatcaggtagcgtgacttaacataagtacatattacaactagcgcatgttaacatgcgtagg 42947434  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
     | ||||||||| |||||||| | |||||||||||   ||||| ||||||||||||||||    
T  42947433 agcattttggacttttactttgagaatgagtgaaatcatttaggtaatgagcagaattct 42947374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 42387748 - 42388010
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||| |||||| | ||||||||||||||||||||| |||||| ||| ||||||||||  ||||||||||||||||||||| ||||||||||   | |    
T  42387748 cacagacaaaaaaaaaattgttcttcagttctgcaccggccaactagcgtgagttaactcccgctcagaatacactagcgcaagttaagtcacgtagctt 42387847  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaa-aatacactagcgcatgttaacatgtgtagg 209  Q
       |||||| | |    | ||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||| || |    
T  42387848 aggttaactcacgctc-agaatacactagcgcatgttaagtcacgtagcgtgacttaacataggtaaaaaaatacactagcgcatgttaacatgtatatg 42387946  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaaa 273  Q
     | ||||| ||| |||||||||||||| |  || ||||||||  ||| ||||| ||||||||||    
T  42387947 agcatttttgacttttactttaaaaataaacgatactgtttaagtaacgagcataattcttaaa 42388010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 2325432 - 2325570
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||||||||| ||    
T  2325432 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaactagcgtgagttaactcacgctcaaaatacactagcgcaagttaagtcacgctatgt 2325531  T
Q  111 gacttaac-ttaggtaataaaatacactagcgcatgttaa 149  Q
    ||| |||| |||||| | ||||||||||||||||||||||    
T  2325532 gacataactttaggt-acaaaatacactagcgcatgttaa 2325570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 42993763 - 42993635
Alignment:
Q  19 aaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaac 118  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||   |||||||| ||    
T  42993763 aaaaaacttttgttcttcagttctgcaccg-ccaactggcgcgagttaactcacgctcagaatacactagtgcaagttaagtcacgtagcgtgactttac 42993665  T
Q  119 ttaggtaataaaatacactagcgcatgttaa 149  Q
     ||||| | ||||||||||||||||||||||    
T  42993664 ataggtta-aaaatacactagcgcatgttaa 42993635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 44833682 - 44833583
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||| |||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  44833682 cacataccaaaaaacgtttgttcttcagttctgcaccggccaactagcgtgagttaactcacgctcagaatacactagcgcaagttaagtcacgctacgt 44833583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 42993704 - 42993567
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttactt 229  Q
    |||||||||| ||| |||||||||||||| ||||||  |||||| | ||||||||||||||||||||||||||  | ||||| |||| ||| ||||||||    
T  42993704 aatacactagtgcaagttaagtcacgtagcgtgactttacataggttaaaaatacactagcgcatgttaacatacgcaggggcatttaggaaatttactt 42993605  T
Q  230 taaaaatgagtgaaactgtttagataatgagcagaatt 267  Q
    |   |||||| || ||| ||||| || |||||||||||    
T  42993604 tgggaatgagcgatactctttaggtagtgagcagaatt 42993567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 44836480 - 44836558
Alignment:
Q  192 catgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    |||||||||||| ||||||| | | ||||||||||||||| ||||||| | |||  |||||||||||||||||||||||    
T  44836480 catgttaacatgcgtaggggcaatatggacatttactttagaaatgagcggaaccatttagataatgagcagaattctt 44836558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 53827661 - 53827739
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| ||||||| ||||||||||||||||||   |||||| || ||| ||||| |||||||||||||||    
T  53827661 cgcatgttaacatgcgtaggggcattttggacatttactttgggaatgagcgatactatttaggtaatgagcagaattc 53827739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 2325498 - 2325642
Alignment:
Q  128 aaaatacactagcgcatgttaagtcacgtagtgtgactgaacat-agataaaaaatacactagcgcatgttaacatgtgtaggggtattttggacattta 226  Q
    |||||||||||||||| |||||||||||   ||||||  ||| | || || |||||||||||||||||||||||||| ||||||  |||||  || ||||    
T  2325498 aaaatacactagcgcaagttaagtcacgctatgtgacataactttaggtacaaaatacactagcgcatgttaacatgcgtagggacattttaaactttta 2325597  T
Q  227 ctttaaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    ||||   ||||   |||||  |||||||||||| |||||||||||    
T  2325598 ctttgggaatggacgaaaccatttagataatgaccagaattctta 2325642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 42381693 - 42381613
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    |||||||||||||| ||| ||| ||||||||||||||||||  ||||||| ||   ||||||| |||||||||||||||||    
T  42381693 cgcatgttaacatgcgtaagggcattttggacatttactttggaaatgagcgatgttgtttaggtaatgagcagaattctt 42381613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 39688757 - 39688836
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaaaa 274  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||  | ||||||||  |||| ||||||||||||||||    
T  39688757 gttaacatgtgtaggggtattttcgacttttactttgagaatgagcaatactgtttaagtaatcagcagaattcttaaaa 39688836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 30533883 - 30533927
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgag 239  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  30533883 gttaacatgtgtaggggtattttggatatttactttgaaaatgag 30533927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 19866811 - 19866730
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    |||| ||||||||| ||||||| ||||| ||| ||||||||   |||||| || ||||||| | ||||||||||||||||||    
T  19866811 cgcaagttaacatgcgtaggggcatttttgacttttactttgggaatgagcgatactgtttgggtaatgagcagaattctta 19866730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 26998292 - 26998373
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaaaaca 276  Q
    |||||||||||||||| |||||||  |||||| |||| ||||||| |||||  ||| ||| | ||||||||||||| |||||    
T  26998292 gttaacatgtgtagggatattttgatcatttattttagaaatgagcgaaaccatttggatgaagagcagaattcttcaaaca 26998373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 54528961 - 54528993
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttac 227  Q
    |||||||||||||||||||||||||||||||||    
T  54528961 gttaacatgtgtaggggtattttggacatttac 54528993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 47068202 - 47068288
Alignment:
Q  64 ttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagt 151  Q
    |||| ||| ||||| ||||||||||||||  |||||||||| ||||||||||||| || || | | |||||| ||||| |||||||||    
T  47068202 ttaagtcacgctcataatacactagcgcatgttaagtcacgttacgtgacttaacataagt-acataatacattagcgtatgttaagt 47068288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 6162682 - 6162760
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| ||||||| ||||||||| ||||||||   |||||| | |||  ||| | |||||||||||||||    
T  6162682 cgcatgttaacatgcgtaggggcattttggacttttactttgggaatgagcggaaccatttgggtaatgagcagaattc 6162760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 47068217 - 47068286
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaa 199  Q
    |||||||||||||||||||||||||||   |||||| ||||||  || | |||||| ||||| |||||||    
T  47068217 aatacactagcgcatgttaagtcacgttacgtgacttaacataagtacataatacattagcgtatgttaa 47068286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 53814555 - 53814640
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    ||||||||||| |||||||| ||||||| ||||||  ||||||||||   |||||| ||| |  ||| | ||||||||||||||||    
T  53814555 cactagcgcatattaacatgcgtaggggcattttgatcatttactttgggaatgagcgaatccatttgggtaatgagcagaattct 53814640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 16931524 - 16931444
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    |||||||||||||| | || | ||| ||||||||||||||||  || ||| || ||| |||  ||||||||||||||||||    
T  16931524 cgcatgttaacatgcgcagagatatattggacatttactttaggaacgagcgatactatttgaataatgagcagaattctt 16931444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 25574917 - 25574862
Alignment:
Q  17 ccaaaaaacatttgttcttcagttctg--caccgaccaactggcgcgagttaactc 70  Q
    ||||||||| |||||||||||||||||  |||||||||||  ||| ||||||||||    
T  25574917 ccaaaaaacgtttgttcttcagttctgaccaccgaccaacgtgcgtgagttaactc 25574862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 1e-89; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 22495894 - 22496155
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  22495894 cacagaccaaaaaacgtttgttcttcagttctacaccggccaactggcgcgagttaactcacgctcagaatacactagcgcaagttaagtcacgctacgt 22495993  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatag---ataaaaaatacactagcgcatgttaacatgtgta 207  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||   | ||||||||||||| |||||||||||||| |||    
T  22495994 gacttaacttaggtaaaaaaatacactagcgcatgttaagtcacgtagcgtgacttaacataggtaaaaaaaaatacactatcgcatgttaacatgcgta 22496093  T
Q  208 ggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
     ||| ||||| |||||||||||| |||||||| || ||| ||||| ||||||||| ||||||    
T  22496094 agggcattttagacatttactttgaaaatgagcgatactatttaggtaatgagcataattct 22496155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 16 - 271
Target Start/End: Original strand, 42121818 - 42122073
Alignment:
Q  16 accaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgactt 115  Q
    |||||||||  ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||    
T  42121818 accaaaaaatgtttgttcttcagttctgcatcggccaactggcgcgagttaactcacgctcagaatacactagcgcaagttcagtcacactacgtgactt 42121917  T
Q  116 aacttaggt-aataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtat 214  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| | |  |  ||    
T  42121918 aacttaggtaaaaaaaatacactagcgcatgttaagtcacgtagtgtgacttaacataggtaaaaaatacactaacgcatgttaacatgcgca-tgacat 42122016  T
Q  215 tttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    |||  ||||||| ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  42122017 tttaaacatttattttaaaaatgagtgatactatttggataatgagcagaattctta 42122073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 11713215 - 11712961
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||| ||||||| |||||| || |||||||||||| | |||| ||| ||||||||||| |||||||||||||| | |||| ||||||||||||||||    
T  11713215 cacagactaaaaaacgtttgttttttagttctgcaccggctaactagcgtgagttaactcacgctcagaatacacttgtgcaagttaagtcacgctacgt 11713116  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatac-actagcgcatgttaacatgtgtagg 209  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||  ||||| ||||||  || | | ||| ||||||||||||||||||  |||||    
T  11713115 gacttaacttaggt-acaaaatacactagcgcatgttaagtcacgtagcatgacttaacataagtacatattacaactagcgcatgttaacatacgtagg 11713017  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaa 265  Q
    || ||||||||| ||||||||   |||||| |||||  | ||| ||||||||||||    
T  11713016 ggcattttggacttttactttgggaatgagcgaaaccatctaggtaatgagcagaa 11712961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 18394792 - 18395048
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||  ||||||||| |||||||||||| |||||| ||| | |||||||||  ||||||||| |||||||||| ||||||||||   | |    
T  18394792 cacagaccaaaaaatgtttgttctttagttctgcaccggccaactagcgtgggttaactcaccctcagaatagactagcgcaagttaagtcacgtagctt 18394891  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
       |||||| |  |   | ||||||||||||| |||||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||   || |    
T  18394892 aggttaactcac-tctcagaatacactagcgcgtgttaagtcacgtagcttgacttaacataggtaaaaaatacactagcgcatgttaacatgcacagag 18394990  T
Q  211 gtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    | |||||||||| |||||||   |||||| || | ||||| | |||||||||||||||    
T  18394991 gcattttggacaattactttgggaatgagcgatattgtttgggtaatgagcagaattc 18395048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 12967409 - 12967265
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtattttggac-atttact 228  Q
    |||||||||||||| |||||||||||||| |||||| ||||||| || ||||||||  |||||||||||||||| |||||||||||||||||  ||||||    
T  12967409 aatacactagcgcaagttaagtcacgtagcgtgacttaacataggtacaaaatacagcagcgcatgttaacatgcgtaggggtattttggactttttact 12967310  T
Q  229 ttaaaaatgagtgaaactgtttagataatgagcagaattcttaaa 273  Q
    || | |||||| | |||  ||||| ||||||||||||||||||||    
T  12967309 ttgagaatgagcggaaccatttaggtaatgagcagaattcttaaa 12967265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 12967477 - 12967340
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| ||||||||||| |||| ||||| |||||| ||| ||||||||||| | ||||||||||||||||||| ||||||||||   |||    
T  12967477 cacagaccaaaaaacgtttgttcttcaattctacaccggccaactagcgtgagttaactcacgttcagaatacactagcgcaagttaagtcacgtagcgt 12967378  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaa 149  Q
    |||||||| ||||| | ||||||||  ||||||||||||    
T  12967377 gacttaacataggt-acaaaatacagcagcgcatgttaa 12967340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 130 - 271
Target Start/End: Complemental strand, 37891760 - 37891619
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttactt 229  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||  || ||||||||||||| ||||||||  |||| ||||| ||||| ||| |||| ||    
T  37891760 aatacactagtgcatgttaagtcacgtaatgtgacttaacataagtacaaaatacactagcacatgttaagttgtgcaggggcattttagacttttagtt 37891661  T
Q  230 taaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    |   ||||| |||||   |||  |||| ||||||||||||||    
T  37891660 tgggaatgactgaaatgatttgaataaagagcagaattctta 37891619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 2154397 - 2154262
Alignment:
Q  134 cactagcgcatgttaagtcacgtagtgtgactgaacatagat-aaaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttactttaa 232  Q
    |||||| |||||||||||||||||| |||||| ||||||| | |||||||||||||  |||||||||  || ||||||  ||||||  | ||||||||      
T  2154397 cactagtgcatgttaagtcacgtagcgtgacttaacataggtaaaaaaatacactaatgcatgttaagttgcgtagggacattttgatcttttactttgg 2154298  T
Q  233 aaatgagtgaaactgtttagataatgagcagaattc 268  Q
     |||||| || | ||||| | |||||||||||||||    
T  2154297 gaatgagcgatattgtttgggtaatgagcagaattc 2154262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 25678350 - 25678271
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    |||| |||||||||| |||| | ||||| ||| |||||||| |||||||| || ||||||| ||||||||||||||||||    
T  25678350 cgcaagttaacatgtttaggagcatttttgacttttactttgaaaatgagcgatactgtttggataatgagcagaattct 25678271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 31133260 - 31133177
Alignment:
Q  187 tagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    |||||||||||||| |||||||||| ||||  ||||||||||||||||||||| ||||   ||| | ||| |||||||||||||    
T  31133260 tagcgcatgttaacttgtgtaggggcatttatgacatttactttaaaaatgagcgaaatgatttgggtaaagagcagaattctt 31133177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 30760226 - 30760154
Alignment:
Q  196 ttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||| | ||||  ||||| ||||||||||||| |||||||||| | |||||  ||||||||||||||||    
T  30760226 ttaacatgcgcagggacattttagacatttactttagaaatgagtgatattgtttgaataatgagcagaattc 30760154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 2154416 - 2154329
Alignment:
Q  64 ttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagt 151  Q
    |||| ||| ||| ||||| |||||| |||  ||||||||||   ||||||||||| ||||||| |||||||||||  |||||||||||    
T  2154416 ttaagtcacgctaagaatgcactagtgcatgttaagtcacgtagcgtgacttaacataggtaaaaaaatacactaatgcatgttaagt 2154329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 230
Target Start/End: Complemental strand, 42119233 - 42119195
Alignment:
Q  192 catgttaacatgtgtaggggtattttggacatttacttt 230  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  42119233 catgttaacatgcgtaggggcattttggacatttacttt 42119195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 12969264 - 12969340
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaatt 267  Q
    |||||||||||||| ||||||| |||||| || ||||||||   |||||| | |||  ||||||||||||||||||||    
T  12969264 cgcatgttaacatgcgtaggggcattttgaacttttacttt-ggaatgagcggaaccatttagataatgagcagaatt 12969340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 6e-88; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 11 - 268
Target Start/End: Complemental strand, 39650455 - 39650196
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| ||  ||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  39650455 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaactagcatgagttaactcacgctcagaatacactagagcaagttaagtcacgctacgt 39650356  T
Q  111 gacttaacttaggtaataaaa--tacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtag 208  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||||| ||||    
T  39650355 gacttaacttaggtaaaaaaaaatacactagcgcatgttaagtcacgtagcgtgacttaacataggtagaaaatacactagcgcatgttaacatgcgtag 39650256  T
Q  209 gggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||| |||||||||||||||||||  |||||| |||||  ||||| |||||||||||||||    
T  39650255 gggcattttggacatttactttaggaatgagcgaaaccatttaggtaatgagcagaattc 39650196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 47485646 - 47485451
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||| ||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  47485646 cacataccaaaaaacggttgttcttcagttctgcaccggccaactggtgcgagttaactcacgctcagaatacactagcgcaagttaagtcacgctacgt 47485547  T
Q  111 gacttaacttaggt-aataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatag---ataaaaaatacactagcgcatgttaacatg 203  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||  ||||||   | ||||||||||| ||||||||||||||||    
T  47485546 gacttaacttaggtaaaaaaaatacactagcgcatgttaagtcgcgtagtgtgact-tacataggtaaaaaaaaatacacgagcgcatgttaacatg 47485451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 50065720 - 50065600
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||  ||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |    
T  50065720 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaacctgcgtgagttaactcatgctcagaatgcactagcgcaagttaagtcacgctacat 50065621  T
Q  111 gacttaacttaggtaataaaa 131  Q
    |||||||||||| ||| ||||    
T  50065620 gacttaacttagataaaaaaa 50065600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 45690987 - 45691088
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaataca-ctagcgcatgttaacatgtgtaggggtattttggacatttact 228  Q
    |||||||||||||||||||||||||||||   |||| ||||||  || | | || | ||||| |||||||||||||||||||| ||||||||| ||||||    
T  45690987 aatacactagcgcatgttaagtcacgtagctagacttaacataagtacacattataactagctcatgttaacatgtgtaggggcattttggacttttact 45691086  T
Q  229 tt 230  Q
    ||    
T  45691087 tt 45691088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 3792635 - 3792560
Alignment:
Q  193 atgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||||| ||| ||| ||||||||| ||||||||  ||||||| |||||| ||| | |||||||||||||||    
T  3792635 atgttaacatgcgtaagggcattttggacttttactttggaaatgagcgaaactatttgggtaatgagcagaattc 3792560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 28475979 - 28476061
Alignment:
Q  187 tagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    ||||||||||||||||||||||||| |||| |  |||||||||| | |||||| | |||  ||| | ||||||||||||||||    
T  28475979 tagcgcatgttaacatgtgtaggggcatttcgatcatttactttgagaatgagcggaaccatttgggtaatgagcagaattct 28476061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 47489027 - 47489105
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||||| | | | ||||| |||||||| |||||||||||| || ||||||| ||||||||  |||||||    
T  47489027 cgcatgttaacatgtgcaagagcattttagacatttattttaaaaatgagcgatactgtttggataatgaagagaattc 47489105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 42883759 - 42883836
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaa 272  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||  ||||  ||||| ||| ||||| |||| ||||    
T  42883759 gttaacatgtgtagggatattttggacatttattttagaaatgagcaaaaccatttagctaaagagcataatttttaa 42883836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 50069237 - 50069312
Alignment:
Q  193 atgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||||| | ||||| ||||||||||||||||||   |||||| ||  |||||| | |||||||||||||||    
T  50069237 atgttaacatgcgcaggggcattttggacatttactttgggaatgagcgatgctgtttgggtaatgagcagaattc 50069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 3792449 - 3792534
Alignment:
Q  186 ctagcgcatgttaacatgtgtaggggt-attttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    |||| ||||||||||||||||| |||  ||||||||| ||||| ||  ||||||| |||||  ||| ||||||||||| |||||||    
T  3792449 ctagagcatgttaacatgtgtatgggacattttggacttttacgttggaaatgagcgaaaccatttggataatgagcataattctt 3792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 5119036 - 5119109
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||| ||||||||  ||||||| |||||||||||||  ||||||  |||| |||| ||||| |||||||||||    
T  5119036 gttaatatgtgtagcagtattttagacatttactttaggaatgagcaaaaccgtttggataaagagcagaattc 5119109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 33617728 - 33617643
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    ||||||||||||||||||||  |||||| |||| || |||||||||| | |||||| ||| |  ||| | ||||||||| ||||||    
T  33617728 cactagcgcatgttaacatgcataggggcatttcggtcatttactttgagaatgagcgaatccatttgggtaatgagcataattct 33617643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 2e-75; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 28796878 - 28796619
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||| |||||||||  ||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  28796878 cacataccaaaaaatgtttgttcttcagttctgcaccggtcaactggcgcgagttaactcacgctcagaaaacactagcgcaagttaagtcacgctacgt 28796779  T
Q  111 gacttaacttaggt-aataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtagg 209  Q
    |||||||||||| | || |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||||||   | |    
T  28796778 gacttaacttagataaaaaaaatacactagcgcatgttaagtcatgtagcgtgacttaacatagataaaaaatacactagcgcgtgttaacatgcacatg 28796679  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    |  |||||||||||||||||| | |||||| || | ||||| | ||||||||||||||||    
T  28796678 gacattttggacatttactttgagaatgagcgatattgtttgggtaatgagcagaattct 28796619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 47043809 - 47044030
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||| |||| |    
T  47043809 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaactggcgcgagttaactcacgctccgaatacactagcgcaacttaagtcacactacat 47043908  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagat-aaaaaatacactagcgcatgttaacatgtgtagg 209  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||| | |||| ||||||| | ||||||||||||||| |||||||||||| | |||    
T  47043909 gacttaacttaggttaaaaaatacactagcgcatgttaactcacgtagcgcgacttaacataggtaaaaaaatacactagcacatgttaacatgcgcagg 47044008  T
Q  210 ggtattttggacatttacttta 231  Q
    || |||||| | ||||||||||    
T  47044009 ggcattttgaatatttacttta 47044030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 53266049 - 53265815
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||| |||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  53266049 cacaaaccaaaaaacgtttgttcttcagttctgcaccggccaactagcgtgagttaactcacgctcagaacacactagcgcaagttaagtcacgctacgt 53265950  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatac-actagcgcatgttaacatgtgtagg 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||  || ||| ||| ||||||||||||||||||| |||||    
T  53265949 gacttaacttaggt-ataaaatacactagcgcatgttaagtcacgtagcgtgacttaacataagtacaaattacaactagcgcatgttaacatgcgtagg 53265851  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaac 245  Q
     | ||||||||  |||||||||  |||||| |||||    
T  53265850 agcattttggaattttactttaggaatgagcgaaac 53265815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 33161886 - 33161668
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||| ||||||| ||||||||||   | |    
T  33161886 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaactagcgtgagttaactcacgctcagaatacaccagcgcaagttaagtcacgtagctt 33161787  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
       |||||| | |    | ||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||| |||||||||||| || ||||    
T  33161786 aggttaactcacgctc-agaatacactagcgcatgttaagtcacatagcgtgacttaacataggtaaaaaatacactagtgcatgttaacatatgcaggg 33161688  T
Q  211 gtattttggacatttacttt 230  Q
    |||||||||| |||||||||    
T  33161687 gtattttggatatttacttt 33161668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 155
Target Start/End: Original strand, 42099394 - 42099522
Alignment:
Q  27 tttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaa 126  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  42099394 tttgttcttcagttctgcaccggccaactggcgcgagttaactcacgttcagaatacactagcgcaacttaagtcacgctacgtgacttaacttaggtta 42099493  T
Q  127 taaaatacactagcgcatgttaagtcacg 155  Q
     ||||||||||||||||  ||||||||||    
T  42099494 aaaaatacactagcgcaacttaagtcacg 42099522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 12572624 - 12572490
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  12572624 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaactggcgtgagttaactcacgctcagaatacactagcgc-aagtaagtcacgctacgt 12572526  T
Q  111 gacttaacttaggt--aataaaatacactagcgcat 144  Q
    ||||||||||||||  || |||||||||||||||||    
T  12572525 gacttaacttaggtaaaaaaaaatacactagcgcat 12572490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 887036 - 887191
Alignment:
Q  27 tttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggt-a 125  Q
    |||||||||||||| || |||| |||||| ||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||| |    
T  887036 tttgttcttcagttatgtaccggccaactagcgtgagttaactcacgctcagaataaactagcgcaagttaagtcacgctacgtgacttaacttaggtaa 887135  T
Q  126 ataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaa 181  Q
    | ||||| |||||||||||||||||||| |||| || ||| ||||||| |||||||    
T  887136 aaaaaattcactagcgcatgttaagtcatgtagcgtaactcaacataggtaaaaaa 887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 46814110 - 46813884
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||  |||||||||||| |||||||||  ||||| ||| ||||||||||| |||||||||||||||||  || |||||||| |   | |    
T  46814110 cacagaccaaaaaatgtttgttcttcagctctgcaccgggcaactagcgtgagttaactcacgctcagaatacactagcataagttaagtcatgtagctt 46814011  T
Q  111 gacttaacttagg-taataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataa-aaaatacactagcgcatgttaacatgtgtag 208  Q
       |||||| | | | ||||  | |||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||| |||||||||| ||| ||||    
T  46814010 aggttaactcacgctcataa--tgcactagcgcatgttaagtcatgtagcgtgacttaacatagataaaaaaatacactaacgcatgttaatatgcgtag 46813913  T
Q  209 gggtattttggacatttactttaaaaatgag 239  Q
    ||| |  || ||| ||||||||| |||||||    
T  46813912 gggca--ttagacttttactttataaatgag 46813884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 36174400 - 36174634
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| ||| |||||||||||||||||  |||||| | | ||||||||||| |||||||||||||||| |||| |||||||||| ||  |    
T  36174400 cacagaccaaaaaacgtttcttcttcagttctgcacctgccaactagtgtgagttaactcacgctcagaatacactagtgcaagttaagtcacg-tagtt 36174498  T
Q  111 ga-cttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatac-actagcgcatgttaacatgtgtag 208  Q
     |  |||||| | |    | |||||||||||||| |||||||||||||| |||||| ||||||  || | | ||| ||| ||||||||||||||| ||||    
T  36174499 taggttaactcacg-ctcagaatacactagcgcaagttaagtcacgtagcgtgacttaacataagtacatattacaactggcgcatgttaacatgcgtag 36174597  T
Q  209 gggtattttggacatttactttaaaaatgagtgaaac 245  Q
     || ||||||||  ||||||||   ||||||||||||    
T  36174598 tggcattttggatttttactttgggaatgagtgaaac 36174634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 46817430 - 46817510
Alignment:
Q  188 agcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| |||||| || |||||| || |||||||||||||||    
T  46817430 agcgcatgttaacatgcgtaggggcattttgaacatttactttaagaatgagcgatactgttcaggtaatgagcagaattc 46817510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 28798147 - 28798226
Alignment:
Q  192 catgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    |||||||||||||| ||||| |||||||||||||||||| | |||||| || ||||||| | ||||||||||||||||||    
T  28798147 catgttaacatgtgcaggggcattttggacatttactttgagaatgagcgatactgtttgggtaatgagcagaattctta 28798226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 265
Target Start/End: Original strand, 40312710 - 40312869
Alignment:
Q  108 cgtgacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagata---aaaaatacactagcgcatgttaacatgt 204  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||||| |||||  ||||||  ||   |  | |||||||||||||||||||||      
T  40312710 cgtgacttaacttaggtac-aaaatatactagcgcatgttaagtcacgtagcgtgacctaacataagtacatactattacactagcgcatgttaacatac 40312808  T
Q  205 gtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaa 265  Q
    ||| | ||||||| ||| ||||||||  ||||||| ||||   ||| | ||||||||||||    
T  40312809 gtaagagtattttagacttttactttggaaatgagcgaaatcatttgggtaatgagcagaa 40312869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 265
Target Start/End: Original strand, 40322786 - 40322945
Alignment:
Q  108 cgtgacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagata---aaaaatacactagcgcatgttaacatgt 204  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||||| |||||  ||||||  ||   |  | |||||||||||||||||||||      
T  40322786 cgtgacttaacttaggtac-aaaatatactagcgcatgttaagtcacgtagcgtgacctaacataagtacatactattacactagcgcatgttaacatac 40322884  T
Q  205 gtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaa 265  Q
    ||| | ||||||| ||| ||||||||  ||||||| ||||   ||| | ||||||||||||    
T  40322885 gtaagagtattttagacttttactttggaaatgagcgaaatcatttgggtaatgagcagaa 40322945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 24972468 - 24972390
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||| ||||||||| |||||||| |||| ||| |||||||||  |||||| || ||||||||| |||||||||||||||    
T  24972468 cgcaagttaacatgcgtaggggtgtttttgacttttactttaggaatgagcgatactgtttaggtaatgagcagaattc 24972390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 33164505 - 33164583
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| ||||||| |||||||||||||||||| | |||||| | |||  ||| | |||||||||||||||    
T  33164505 cgcatgttaacatgcgtaggggcattttggacatttactttgagaatgagcggaaccatttgggtaatgagcagaattc 33164583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 55523798 - 55523725
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||| ||||||| ||||| ||| |||||||| |||||||| || | ||||| |||||||||||||||||    
T  55523798 gttaacatgcgtaggggcattttcgacttttactttgaaaatgagcgataatgtttggataatgagcagaattc 55523725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 36172243 - 36172165
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||   |||||||||||||||| ||||||||   |||||||| |||| ||| | |||||||||||||||    
T  36172243 cgcatgttaacatacataggggtattttggacttttactttgggaatgagtggaactatttgggtaatgagcagaattc 36172165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 12572820 - 12572897
Alignment:
Q  191 gcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||| |||||||| | ||||| |||||||||||||||||| | |||||  || ||||||| ||| |||||||||||||    
T  12572820 gcatattaacatgcgcaggggcattttggacatttactttgagaatgaacgatactgtttggatgatgagcagaattc 12572897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 40451004 - 40450931
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||| ||||||| ||||| ||| ||||||||   |||||| || ||||||||| |||||||||||||||    
T  40451004 gttaacatgcgtaggggcattttcgacttttactttgggaatgagcgatactgtttaggtaatgagcagaattc 40450931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 55527907 - 55527991
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||| |||||||||| ||||||| |||| || ||||| ||||  ||||||| ||| |  |||| ||||||||||||||||    
T  55527907 cactagcgcgtgttaacatgcgtaggggcatttcggtcatttgctttggaaatgagcgaatccatttaaataatgagcagaattc 55527991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 1227928 - 1227994
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctg--caccgaccaactggcgcgagttaactcatgct 75  Q
    ||||||||||||||| |||||||||||||||||  ||||| |||||| | | |||||||||| ||||    
T  1227928 cacagaccaaaaaacgtttgttcttcagttctgaccaccggccaactagtgtgagttaactcgtgct 1227994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 42099526 - 42099597
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagc 261  Q
    |||||||||||||| | ||| ||||||||||||||||||||  ||||||| || | |||||  |||||||||    
T  42099526 cgcatgttaacatgcgcaggtgtattttggacatttactttggaaatgagcgatattgtttgaataatgagc 42099597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 24974140 - 24974186
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttacttt 230  Q
    |||||||||||||||||||| ||||||| |||| || ||||||||||    
T  24974140 cactagcgcatgttaacatgcgtaggggcatttcggtcatttacttt 24974186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 27992296 - 27992353
Alignment:
Q  182 tacactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgag 239  Q
    ||||||||||   |||||||||  ||||||||||||||||||||| |||| |||||||    
T  27992296 tacactagcgtgagttaacatgcataggggtattttggacatttattttagaaatgag 27992353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 5e-73; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 1974413 - 1974194
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  1974413 cacagaccaaaaaacttttgttcttcggttctgcaccggccaactggcgcaagttaactcacgctcagaatacactagcgcaacttaagtcacactacgt 1974314  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
    ||||||||||||  || ||||||||||||||||||||||||||| || || |||| ||||||| ||||||||||||||||||||||||||||| | | |     
T  1974313 gacttaacttagacaacaaaatacactagcgcatgttaagtcacataatgcgacttaacataggtaaaaaatacactagcgcatgttaacatgcgcaaga 1974214  T
Q  211 gtattttggacatttacttt 230  Q
    | ||||||||||||||||||    
T  1974213 gcattttggacatttacttt 1974194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 40017173 - 40017433
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||  |||| ||||||||||||||| ||||||||||||||||    
T  40017173 cacagaccaaaaaacgtttgttcttcagttctgcaccggccaactgacgcgagttaactcacactcataatacactagcgcaagttaagtcacgctacgt 40017272  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
    |||||||||||||||| |||||||||||||| || |||||||||||| ||||||| ||||||| |||||||||||||||| ||||||||| || ||| ||    
T  40017273 gacttaacttaggtaaaaaaatacactagcgaattttaagtcacgtaatgtgactcaacataggtaaaaaatacactagcacatgttaacctgcgtaagg 40017372  T
Q  211 gtattttggacatttactttaaaaatgagtgaaactgtttag---ataatgagcagaattc 268  Q
      ||||| |||||||| |||   ||||||||| ||| ||| |   ||||||||||||||||    
T  40017373 acattttagacatttattttgggaatgagtgatactctttgggtaataatgagcagaattc 40017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 11 - 226
Target Start/End: Original strand, 3461404 - 3461620
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||||| ||||| ||||||||||||||||    
T  3461404 cacagaccaaaaaacgtttgttctttagttctgcaccggccaactggcgtgagttaactcacgttcagaatacactaacgcaagttaagtcacgctacgt 3461503  T
Q  111 gacttaacttaggt-aataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtagg 209  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||  |||||| ||||||| |||||||| ||||||| ||||||||| |  | |||    
T  3461504 gacttaacttaggtaaaaaaaatacattagcgtatgttaagtcacgtaacgtgacttaacataggtaaaaaatgcactagcacatgttaacttacgcagg 3461603  T
Q  210 ggtattttggacattta 226  Q
    |||||||| ||||||||    
T  3461604 ggtattttagacattta 3461620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 1975118 - 1975235
Alignment:
Q  27 tttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttagg-ta 125  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  1975118 tttgttcttcagttctgcaccgaccaaccggcgcgagttaactcacgctcagaatacactagcgcaacttaagtcacgctacgtgacttaacttaggtta 1975217  T
Q  126 ataaaatacactagcgca 143  Q
    | ||||||||||| ||||    
T  1975218 aaaaaatacactaacgca 1975235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 19401820 - 19402054
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  19401820 cacagaccaaaaaatatttgtttttcagttctgcaccggccaactagtgtgagttaactcacgctcagaatacactagcgcaagttaagtcacgctacgt 19401919  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatac-actagcgcatgttaacatgtgtagg 209  Q
    ||||||||||  |  |    ||    || |  | |||||||||||||| |||||| ||||||  || ||| ||| ||||||||||||||||||| ||| |    
T  19401920 gacttaacttgcgctagtgtattttgta-cctaagttaagtcacgtagcgtgacttaacataagtacaaattacaactagcgcatgttaacatgcgtatg 19402018  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaac 245  Q
    || ||||||||| |||||||| | ||||||||||||    
T  19402019 ggcattttggacttttactttgagaatgagtgaaac 19402054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 6270789 - 6270696
Alignment:
Q  57 gcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggt-aataaaatacactagcgcatgttaa 149  Q
    |||| |||||||||| |||||||||||||||| |||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  6270789 gcgcaagttaactcacgctcagaatacactagtgcaagttaagtcaccctacgtgacttaacttaggtaaaaaaaatacactagcgcatgttaa 6270696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 6270858 - 6270771
Alignment:
Q  19 aaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgct 106  Q
    ||||||| |||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||    
T  6270858 aaaaaacgtttgtttttcagttctgcaccggccaactggcgtgagttaactcacgctcagaatacactagcgcaagttaactcacgct 6270771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 19401976 - 19401907
Alignment:
Q  95 ttaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgact 165  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||    
T  19401976 ttaagtcacgctacgtgacttaacttaggt-acaaaatacactagcgcaagttaagtcacgtagcgtgact 19401907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 1975302 - 1975380
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| | | ||| ||||||||||||||||||  |||||||  |  ||||||||||||||||||||||||    
T  1975302 cgcatgttaacatgcgcatgggcattttggacatttactttggaaatgagcaatgctgtttagataatgagcagaattc 1975380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 3458092 - 3458014
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||||| | ||||||||||||||||||||||  |||||||  | || |||| | |||||||||||||||    
T  3458092 cgcatgttaacatgtgcatgggtattttggacatttactttggaaatgagcaatacggtttcggtaatgagcagaattc 3458014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 40008790 - 40008712
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| | ||||| ||||| |||||||||||| | |||||| || | ||||||| |||||||||||||||    
T  40008790 cgcatgttaacatgcgcaggggcattttagacatttactttgagaatgagcgataatgtttaggtaatgagcagaattc 40008712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 1145227 - 1145138
Alignment:
Q  182 tacactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    ||||||||||   ||||||||| |||| || ||||||| ||||||||||   |||||| |||||||||| ||||||||||| ||||||||    
T  1145227 tacactagcgtgagttaacatgcgtagaggcattttggtcatttactttgggaatgagcgaaactgtttggataatgagcataattctta 1145138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 4846835 - 4846908
Alignment:
Q  12 acagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacac 85  Q
    |||||| |||||| ||||||||||||||||||||||   |||||||||||| | |||| | |||||||||||||    
T  4846835 acagacaaaaaaatatttgttcttcagttctgcaccagtcaactggcgcgaatcaactaacgctcagaatacac 4846908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 6269291 - 6269236
Alignment:
Q  213 attttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||||||||| || |||||||| || ||||||| |||||||||||||||||    
T  6269291 attttggacatttacattgaaaatgagcgatactgtttggataatgagcagaattc 6269236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 34016086 - 34016002
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||| ||||||||||||||||||||| ||||  | ||||||||||   |||||| ||| |  ||||| |||||||||||||||    
T  34016086 cactagtgcatgttaacatgtgtaggggcatttcagtcatttactttgggaatgagcgaatccatttaggtaatgagcagaattc 34016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 6706029 - 6706107
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagca 262  Q
    |||||||||||||||||||| ||||||| ||||  | ||||||||||  ||||||| ||| |  ||| |||||||||||    
T  6706029 cactagcgcatgttaacatgcgtaggggcatttcagtcatttactttggaaatgagcgaatccatttggataatgagca 6706107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 17644606 - 17644640
Alignment:
Q  196 ttaacatgtgtaggggtattttggacatttacttt 230  Q
    |||||||| ||||||||||||||||||||||||||    
T  17644606 ttaacatgcgtaggggtattttggacatttacttt 17644640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 28677967 - 28677885
Alignment:
Q  187 tagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    |||||||||||||| |  |||||||||||| || |||||||||||  |||||| ||  |  ||| ||||||||||||||||||    
T  28677967 tagcgcatgttaacttacgtaggggtatttcggtcatttactttaggaatgagcgattccatttggataatgagcagaattct 28677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 34017616 - 34017697
Alignment:
Q  187 tagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||||||| || || |||||||||||| || |||||||||| |||||||| | |||  |||   |||||||||||||||    
T  34017616 tagcgcatgtttacttgcgtaggggtatttcggtcatttactttgaaaatgagcggaaccatttgagtaatgagcagaattc 34017697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 36580308 - 36580223
Alignment:
Q  183 acactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||||| ||| |||||||||||||||| ||||||| || |||| |||| |||| || | |||  ||||  |||||||||||||||    
T  36580308 acactagtgcaagttaacatgtgtagggatattttgaacttttattttagaaataagcggaaccatttaagtaatgagcagaattc 36580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 7335606 - 7335534
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaatt 267  Q
    |||||||||| |||||||||||||| |||||| ||||  ||||||  |||| |||| |||||  |||||||||    
T  7335606 gttaacatgtataggggtattttggtcatttattttaggaatgagcaaaaccgtttggataaaaagcagaatt 7335534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 11135825 - 11135765
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaa 244  Q
    |||||||| | ||||||||| ||||||||||||||| |||||| |||  ||||||| ||||    
T  11135825 cactagcgtaagttaacatgcgtaggggtattttggtcatttattttggaaatgagcgaaa 11135765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 28784766 - 28784821
Alignment:
Q  17 ccaaaaaacatttgttcttcagttctg--caccgaccaactggcgcgagttaactc 70  Q
    ||||||||| |||||||||||||||||  |||||||||||  ||| ||||||||||    
T  28784766 ccaaaaaacgtttgttcttcagttctgaccaccgaccaacgtgcgtgagttaactc 28784821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 33037386 - 33037434
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaa 243  Q
    ||||||||||||||||| ||||||| ||||||||||   ||||||||||    
T  33037386 gttaacatgtgtaggggcattttggtcatttactttgggaatgagtgaa 33037434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 2e-72; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 1537066 - 1537324
Alignment:
Q  11 cacagaccaaaaaa-catttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacg 109  Q
    |||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||| |||||| |||||||||  ||||||||||||||||| |    
T  1537066 cacagaccaaaaaaacgtttgttcttcagttctgcaccggccaattggcgcgagttaactcacgctcagcatacactagttcaaattaagtcacgctatg 1537165  T
Q  110 tgacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtagg 209  Q
    ||||||||||| ||| | ||||||||| |||| ||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||| | |||    
T  1537166 tgacttaactttggtcaaaaaatacaccagcgtatgttaagtaacgtagcgtgacttaacataggtaaaaaatacactagcgcatgttaacatgcgcagg 1537265  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    || |||||| ||||||||||| | |||||  || ||||||| | |||||||||||||||    
T  1537266 ggcattttgaacatttactttgagaatgaacgatactgtttgggtaatgagcagaattc 1537324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 48212037 - 48211845
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||  ||||||    
T  48212037 cacagaccaaaaaacgtttgttcttcagttatgcaccaaccaactggtgcgagttaactcacgctcagaatacactagcgcaagttaagtcatactacgt 48211938  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatg 203  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    |  | ||||||  |||||||||||||| | ||||||||||||    
T  48211937 gacttaacttaggtaagaaaatacactagcgcatgttaagtcacgtaacacggtttaacataagtaaaaaatacactaacacatgttaacatg 48211845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 26502251 - 26502510
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| | ||  ||||||||||  ||| ||||||||||||||||| ||||||||||   |||    
T  26502251 cacagaccaaaaaacgtttgttcttcagttctgccccggccaagtagcatgagttaactcgcgctaagaatacactagcgcaagttaagtcacgtagcgt 26502350  T
Q  111 gacttaacttaggtaataaaa-tacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtagg 209  Q
     ||||||| ||||||| |||| |||||| |||||||||||| ||||||| |||||| |||||| ||| | | |||||||||||||||| | |||||||||    
T  26502351 aacttaacataggtaaaaaaaatacactggcgcatgttaagccacgtagcgtgacttaacataaatacagattacactagcgcatgttgaaatgtgtagg 26502450  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
     | ||||||||| |||||||| | |||||| |||||  ||||||||| ||||| ||||||    
T  26502451 cgcattttggacttttactttgagaatgagcgaaaccatttagataaggagcataattct 26502510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 26590463 - 26590204
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| | ||  ||||||||||  ||| ||||||||||||||||| ||||||||||   |||    
T  26590463 cacagaccaaaaaacgtttgttcttcagttctgccccggccaagtagcatgagttaactcgcgctaagaatacactagcgcaagttaagtcacgtagcgt 26590364  T
Q  111 gacttaacttaggtaataaaa-tacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtagg 209  Q
     ||||||| ||||||| |||| |||||| |||||||||||| ||||||| |||||| |||||| ||| | | |||||||||||||||| | |||||||||    
T  26590363 aacttaacataggtaaaaaaaatacactggcgcatgttaagccacgtagcgtgacttaacataaatacagattacactagcgcatgttgaaatgtgtagg 26590264  T
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
     | ||||||||| |||||||| | |||||| |||||  ||||||||| ||||| ||||||    
T  26590263 cgcattttggacttttactttgagaatgagcgaaaccatttagataaggagcataattct 26590204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 31826066 - 31826215
Alignment:
Q  29 tgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaata 128  Q
    ||||||||| ||||||||||  |||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |    
T  31826066 tgttcttcaattctgcaccggtcaactggcgcgagttaactca--ctcagaatacactagcgcaagttaagtcacgctacgtgacttaacttagataa-a 31826162  T
Q  129 aaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaa 181  Q
    |||||||||||||| ||||| ||||||||| |||||| ||||||| |||||||    
T  31826163 aaatacactagcgcttgttatgtcacgtagcgtgacttaacataggtaaaaaa 31826215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 38791104 - 38790965
Alignment:
Q  11 cacagaccaaaaaa-catttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacg 109  Q
    |||||||||||||| | |||||||||||||||| ||||  |||||| ||| ||     |||| ||||||||||||||||||||| |||||||||||||||    
T  38791104 cacagaccaaaaaaacgtttgttcttcagttctacaccagccaactagcgtga-----ctcacgctcagaatacactagcgcaagttaagtcacgctacg 38791010  T
Q  110 tgacttaacttaggtaataaaatacactagcgcatgttaagtcacg 155  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  38791009 tgacttaacttaggt-acaaaatacactagcgcatgttaagtcacg 38790965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 46302425 - 46302321
Alignment:
Q  51 caactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaag 150  Q
    ||||| ||| ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||| ||  |||||    
T  46302425 caactagcgtgagttaactcacgctcagaatacattagcgcaacttaagtcacgctacgtgacttaacttaggttaaaaaatacactagcacaacttaag 46302326  T
Q  151 tcacg 155  Q
    |||||    
T  46302325 tcacg 46302321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 38790962 - 38790883
Alignment:
Q  191 gcatgttaacatgtgtaggggtattttggacatttacttt-aaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    ||||||||||||| ||||||||||||||||| ||||||||  |||||||| |||||  ||| ||||||||||||||||||    
T  38790962 gcatgttaacatgcgtaggggtattttggacttttactttggaaaatgagcgaaaccatttggataatgagcagaattct 38790883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 130 - 268
Target Start/End: Original strand, 30362817 - 30362955
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttactt 229  Q
    ||||||||||||||| ||||||||||||  |||||| ||||||  || | ||||||||||| ||||||||  || | | | | |||||| || |||||||    
T  30362817 aatacactagcgcatcttaagtcacgtaacgtgacttaacataagtacataatacactagcacatgttaagttgcgcatgagcattttgaacttttactt 30362916  T
Q  230 taaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||| |||||| |||||  |||| |||| |||||||||||    
T  30362917 taagaatgagcgaaacgatttaaataaagagcagaattc 30362955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 31826114 - 31826182
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgtta 198  Q
    |||||||||||||| |||||||||||    |||||| ||| |||||||||||||||||||||| |||||    
T  31826114 aatacactagcgcaagttaagtcacgctacgtgacttaacttagataaaaaatacactagcgcttgtta 31826182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 31853291 - 31853349
Alignment:
Q  210 ggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||| |||||| |||||||||||| | |||| ||| |||||||||||||||||    
T  31853291 ggtattttggtcatttattttaaaaatgagcggaactatttggataatgagcagaattc 31853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 38791040 - 38790971
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaa 199  Q
    |||||||||||||| |||||||||||    |||||| ||| ||| || ||||||||||||||||||||||    
T  38791040 aatacactagcgcaagttaagtcacgctacgtgacttaacttaggtacaaaatacactagcgcatgttaa 38790971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 31823667 - 31823587
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    |||||||||||||||| ||||| |||||||| ||||| |||   |||||| || | ||||| | |||||||||||||||||    
T  31823667 cgcatgttaacatgtgcaggggcattttggatatttattttgggaatgagcgatattgtttgggtaatgagcagaattctt 31823587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 38047729 - 38047649
Alignment:
Q  185 actagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaa 265  Q
    ||||||||||||||||||| |||| |  ||||||  |||||| ||||||||| || ||| || |||||||||| |||||||    
T  38047729 actagcgcatgttaacatgcgtagagacattttgatcatttattttaaaaataagcgaatctatttagataataagcagaa 38047649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 30362802 - 30362888
Alignment:
Q  64 ttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagt 151  Q
    |||| ||| ||||| ||||||||||||||  ||||||||||  |||||||||||| || || | | ||||||||||| ||||||||||    
T  30362802 ttaagtcacgctcataatacactagcgcatcttaagtcacgtaacgtgacttaacataagt-acataatacactagcacatgttaagt 30362888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 38792048 - 38792103
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaac 245  Q
    ||||||||| || ||||||||||||||| ||| |||||||| | ||||||||||||    
T  38792048 cgcatgttatcaagtgtaggggtattttagacttttactttgagaatgagtgaaac 38792103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 5166 - 5212
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttacttt 230  Q
    |||||||||||||||||||| ||||||| |||| || ||||||||||    
T  5166 cactagcgcatgttaacatgcgtaggggcatttcggtcatttacttt 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 48221700 - 48221738
Alignment:
Q  192 catgttaacatgtgtaggggtattttggacatttacttt 230  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  48221700 catgttagcatgcgtaggggtattttggacatttacttt 48221738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 41800049 - 41800110
Alignment:
Q  213 attttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattcttaaaa 274  Q
    ||||| ||| |||| |||||||||||  || | |||||||||||||||||||||||| ||||    
T  41800049 attttcgacttttattttaaaaatgaacgatattgtttagataatgagcagaattctaaaaa 41800110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 41957141 - 41957024
Alignment:
Q  128 aaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttac 227  Q
    |||||||||||| | |||||||||||||| | |||||| | ||||  || | | ||||  |||||||||||||||   || ||||||||||||| ||||     
T  41957141 aaaatacactagtgtatgttaagtcacgtggcgtgacttaccataagtacagattacatgagcgcatgttaacatacttatgggtattttggacttttat 41957042  T
Q  228 tttaaaaatgagtgaaac 245  Q
    |||  ||||||| |||||    
T  41957041 tttggaaatgagcgaaac 41957024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 19365389 - 19365473
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||||| ||| |||||||||||| || |||||  |||   |||||| ||| |  ||||| |||||||||||||||    
T  19365389 cactagcgcatgttaaaatgcgtaggggtatttcggtcattttatttgggaatgagcgaatccatttaggtaatgagcagaattc 19365473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 38386258 - 38386178
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcaga 264  Q
    |||||||||||||||||||| ||||||| ||||    ||||||||||  ||||||| ||| |  ||| |||||||||||||    
T  38386258 cactagcgcatgttaacatgcgtaggggcatttcaatcatttactttggaaatgagcgaatccatttggataatgagcaga 38386178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 6e-51; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 28704100 - 28703954
Alignment:
Q  11 cacagaccaaaaaa-catttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacg 109  Q
    |||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  28704100 cacagaccaaaaaaacgtttgttcttcaattctgcaccggccaactggcgcgagttaactcacgctcagaatacactagcgcaagttaaatcacgctacg 28704001  T
Q  110 tgacttaacttaggtaataaaatacactagcgcatgttaagtcacgt 156  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||    
T  28704000 tgacttaacttaggtaagaaaatacattaacgcatgttaagtcacgt 28703954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 43635316 - 43635162
Alignment:
Q  82 acactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaa 181  Q
    |||||||| ||| |||||||| |||||| || ||||||||||||| |||||||||||||||||||||||||||| || || ||| ||||||  || |||     
T  43635316 acactagcacaagttaagtcatgctacgcgaattaacttaggtaaaaaaatacactagcgcatgttaagtcacgaagcgtaacttaacataagtacaaat 43635217  T
Q  182 tacactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaat 236  Q
    |||||||||||||||||||||| ||| ||| | | | ||||||||||||| ||||    
T  43635216 tacactagcgcatgttaacatgcgtacgggcaatatagacatttactttagaaat 43635162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 130 - 268
Target Start/End: Original strand, 4640735 - 4640873
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttactt 229  Q
    |||||||||||||||||||||||||| || ||| || ||||||  |||||||||||||||||||||||||  |||||||||| ||||| | | |||||||    
T  4640735 aatacactagcgcatgttaagtcacgaagcgtggcttaacatatgtaaaaaatacactagcgcatgttaagttgtgtaggggcattttagtcttttactt 4640834  T
Q  230 taaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |  ||||||| || || |||| | |||||||||||||||    
T  4640835 tggaaatgagcgatacagtttgggtaatgagcagaattc 4640873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 35841469 - 35841396
Alignment:
Q  196 ttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    |||||||| |||||| ||||||||||||||||||||||||||||   |||||||| | ||| ||||||||||||    
T  35841469 ttaacatgcgtagggatattttggacatttactttaaaaatgagcacaactgttttggtaaagagcagaattct 35841396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 33220782 - 33220865
Alignment:
Q  185 actagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||| |||||||||||||| ||||||| |||||| || ||||||||   ||||||||||||  ||| | |||||||||||||||    
T  33220782 actaacgcatgttaacatgcgtaggggcattttgaacttttactttgggaatgagtgaaaccatttgggtaatgagcagaattc 33220865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 4640733 - 4640806
Alignment:
Q  77 agaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagt 151  Q
    ||||||||||||||||  ||||||||||   |||| |||||| || |||| ||||||||||||||||||||||||    
T  4640733 agaatacactagcgcatgttaagtcacgaagcgtggcttaacatatgtaa-aaaatacactagcgcatgttaagt 4640806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 33800498 - 33800576
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| | | ||| ||||| |||||||||||||  |||||| || |||||||| ||||||||| ||||||    
T  33800498 cgcatgttaacatgcgcaagggcattttagacatttactttaggaatgagcgatactgtttaaataatgagcggaattc 33800576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 34279555 - 34279639
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    ||||| |||||||||||||||||||||| |||| |  |||||||||||  |||||| ||| |  ||||  |||||||||||||||    
T  34279555 cactaacgcatgttaacatgtgtaggggcatttcgatcatttactttaggaatgagcgaatccatttaagtaatgagcagaattc 34279639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 24898050 - 24897975
Alignment:
Q  195 gttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctt 270  Q
    ||||||||||||| ||||||||| || |||||||||| ||| |||  ||| ||||| ||||| ||||||| |||||    
T  24898050 gttaacatgtgtaagggtatttttgatatttactttagaaacgagcaaaaatgtttggataaagagcagatttctt 24897975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 37686769 - 37686683
Alignment:
Q  64 ttaactcatgctcagaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagt 151  Q
    |||| ||| ||||| ||||||||||||||  | |||||| || |||||||||||| || || | |||||||||||| |||||||||||    
T  37686769 ttaagtcacgctcataatacactagcgcatgtcaagtcatgcaacgtgacttaacataagt-acaaaatacactagtgcatgttaagt 37686683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 43635359 - 43635317
Alignment:
Q  18 caaaaaacatttgttcttcagttctgcaccgaccaactggcgc 60  Q
    |||||||| |||||||||||||||||||||| |||||| ||||    
T  43635359 caaaaaacgtttgttcttcagttctgcaccggccaactagcgc 43635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 5967231 - 5967316
Alignment:
Q  184 cactagcgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattct 269  Q
    |||||||||||||||||||| ||||||| |||| |  ||||||||||   |||||| ||| |  ||| | ||||||||||||||||    
T  5967231 cactagcgcatgttaacatgcgtaggggcatttcgatcatttactttgggaatgagcgaatccatttgggtaatgagcagaattct 5967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 37686754 - 37686685
Alignment:
Q  130 aatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaa 199  Q
    ||||||||||||||||| |||||| | |  |||||| ||||||  || |||||||||||| |||||||||    
T  37686754 aatacactagcgcatgtcaagtcatgcaacgtgacttaacataagtacaaaatacactagtgcatgttaa 37686685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 4639871 - 4639839
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctg 43  Q
    ||||||||||||||||||||||||||| |||||    
T  4639871 cacagaccaaaaaacatttgttcttcaattctg 4639839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 195 - 413
Alignment:
Q  11 cacagaccaaaaaacatttgttcttcagttctgcaccgaccaactggcgcgagttaactcatgctcagaatacactagcgcaaattaagtcacgctacgt 110  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||| | | ||||||||||  ||| ||||||||||||||||| ||||||||||   |||    
T  195 cacagactaaaaaacgtttgttcttcagttctgcaccggccaactagtgtgagttaactcgcgctaagaatacactagcgcaagttaagtcacgtagcgt 294  T
Q  111 gacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagataaaaaatacactagcgcatgttaacatgtgtaggg 210  Q
    |||||||| ||||| | ||||||||| ||||||| ||||||||||||| |||||| ||||||  || | | ||||||||||||||||||    |||| ||    
T  295 gacttaacataggt-acaaaatacaccagcgcatattaagtcacgtagcgtgacttaacataagtacagattacactagcgcatgttaagtcatgtaagg 393  T
Q  211 gtattttggacatttacttt 230  Q
    | ||||||||| ||||||||    
T  394 gcattttggacttttacttt 413  T

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Target: scaffold0024 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 455 - 573
Target Start/End: Complemental strand, 117625 - 117503
Alignment:
Q  455 tgttatctcccatttacagagaattgataatttgatatttcattatctatctatttatcactattagatgtttaagatatattcacaca----cactcat 550  Q
    ||||||||| |||||||||||||||| |||| | ||  |||||||||||||||||||| |||||||||| |||||||||||||| ||||    |||  ||    
T  117625 tgttatctcgcatttacagagaattggtaatctaatgattcattatctatctatttattactattagatatttaagatatattcgcacatgcacacatat 117526  T
Q  551 aaatttttgttgaacgacacaca 573  Q
    | |||||||||||||| ||||||    
T  117525 acatttttgttgaacggcacaca 117503  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 582
Target Start/End: Original strand, 117979 - 118105
Alignment:
Q  465 catttacagagaattgataatttgatatttcattatctat---ctatttatcactattagatgt--ttaagatatattcacaca----cactcataaatt 555  Q
    |||||||||||||||| |||| | ||  ||||||||||||   |||||||| |||||||||| |  ||||||||||||| ||||    |||  ||| |||    
T  117979 catttacagagaattggtaatctaatgattcattatctattatctatttattactattagatatatttaagatatattcgcacagccacacatatacatt 118078  T
Q  556 tttgttgaacgacacacagatatactt 582  Q
    ||||||||||| |||||| ||||||||    
T  118079 tttgttgaacggcacacatatatactt 118105  T

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Target: scaffold0024; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 406
Target Start/End: Original strand, 117821 - 117868
Alignment:
Q  360 ggcttttcaatttgaggtattttt-acagctctaaacctaacacaaac 406  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  117821 ggcttttcaatctgaggtttttttgacagctctaaacctaacacaaac 117868  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 230
Target Start/End: Complemental strand, 69912 - 69761
Alignment:
Q  77 agaatacactagcgcaaattaagtcacgctacgtgacttaacttaggtaataaaatacactagcgcatgttaagtcacgtagtgtgactgaacatagata 176  Q
    |||||| |||||||||| ||||||||||    |||||||||| |||||   |||||||||| |||||||| |||||||||||  ||| | ||||||  ||    
T  69912 agaataaactagcgcaagttaagtcacgtagtgtgacttaacataggttc-aaaatacacttgcgcatgtcaagtcacgtagcatgatttaacataagta 69814  T
Q  177 aaaaatacactagcgcatgttaacatgtgtaggggtattttggacatttacttt 230  Q
     | ||||||||| || |||||||||||||||  || ||||||||| ||||||||    
T  69813 cataatacactaacgtatgttaacatgtgta-aggcattttggacttttacttt 69761  T

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Target: scaffold1063 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 1553 - 1475
Alignment:
Q  190 cgcatgttaacatgtgtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattc 268  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||||| | |||  ||| | |||||||||||||||    
T  1553 cgcatgttaacatgcgcaggggcattttggacttttactttaaaaatgagcggaaccatttgggtaatgagcagaattc 1475  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 35839 - 35773
Alignment:
Q  205 gtaggggtattttggacatttactttaaaaatgagtgaaactgtttagataatgagcagaattctta 271  Q
    ||||||| |||||||||||||||||| | ||||||  ||| ||||| | ||| ||||||||||||||    
T  35839 gtaggggcattttggacatttactttgagaatgagcaaaattgtttggttaaagagcagaattctta 35773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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