View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2723_low_13 (Length: 429)

Name: NF2723_low_13
Description: NF2723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2723_low_13
NF2723_low_13
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-61)||(1135-1193)
[»] chr7 (46 HSPs)
chr7 (1-61)||(3497594-3497652)
chr7 (1-56)||(40656185-40656240)
chr7 (1-56)||(4887590-4887643)
chr7 (2-57)||(45236927-45236980)
chr7 (2-56)||(2354875-2354927)
chr7 (2-56)||(35157162-35157214)
chr7 (1-56)||(40013261-40013315)
chr7 (1-55)||(48612516-48612568)
chr7 (4-54)||(9234327-9234377)
chr7 (1-54)||(27396391-27396442)
chr7 (1-55)||(33228698-33228751)
chr7 (2-55)||(48729762-48729813)
chr7 (1-56)||(1573918-1573971)
chr7 (1-56)||(4106552-4106605)
chr7 (1-56)||(6596540-6596593)
chr7 (1-56)||(29151581-29151634)
chr7 (1-56)||(35849293-35849346)
chr7 (2-56)||(9379989-9380041)
chr7 (1-55)||(10061093-10061145)
chr7 (1-55)||(19306711-19306763)
chr7 (1-55)||(31717296-31717348)
chr7 (2-55)||(1323682-1323733)
chr7 (1-51)||(1869818-1869867)
chr7 (3-56)||(18944922-18944973)
chr7 (2-55)||(40809044-40809095)
chr7 (1-49)||(33512802-33512848)
chr7 (2-58)||(37410780-37410834)
chr7 (1-57)||(47584748-47584802)
chr7 (1-56)||(4069193-4069246)
chr7 (1-56)||(17895632-17895685)
chr7 (1-57)||(47086377-47086432)
chr7 (2-52)||(7312531-7312579)
chr7 (1-51)||(10166873-10166921)
chr7 (1-56)||(34708671-34708725)
chr7 (1-55)||(42557579-42557631)
chr7 (1-55)||(45041810-45041862)
chr7 (1-55)||(46416548-46416600)
chr7 (2-55)||(2228158-2228209)
chr7 (1-51)||(23789490-23789539)
chr7 (2-55)||(31300075-31300126)
chr7 (1-55)||(43188528-43188581)
chr7 (1-30)||(8946450-8946479)
chr7 (1-49)||(21226070-21226116)
chr7 (1-29)||(19258447-19258475)
chr7 (1-56)||(29628461-29628514)
chr7 (1-52)||(38261003-38261052)
[»] chr3 (63 HSPs)
chr3 (1-57)||(28171056-28171111)
chr3 (1-60)||(6583312-6583369)
chr3 (1-56)||(8381077-8381130)
chr3 (1-56)||(13525167-13525220)
chr3 (1-56)||(46838804-46838857)
chr3 (2-56)||(2687557-2687609)
chr3 (1-55)||(4232254-4232306)
chr3 (1-55)||(4833186-4833238)
chr3 (1-56)||(47069004-47069058)
chr3 (2-55)||(3917765-3917816)
chr3 (1-55)||(11751210-11751263)
chr3 (1-51)||(40840171-40840220)
chr3 (1-57)||(8507929-8507983)
chr3 (1-57)||(24250722-24250776)
chr3 (1-56)||(4976785-4976838)
chr3 (1-56)||(24650624-24650677)
chr3 (1-56)||(29212142-29212195)
chr3 (1-56)||(30553045-30553098)
chr3 (1-56)||(41464662-41464715)
chr3 (1-51)||(11312593-11312641)
chr3 (1-55)||(17500926-17500978)
chr3 (1-55)||(22371449-22371501)
chr3 (1-55)||(27396853-27396905)
chr3 (1-55)||(32961055-32961107)
chr3 (2-56)||(34397678-34397730)
chr3 (1-55)||(38127919-38127971)
chr3 (1-55)||(54097517-54097569)
chr3 (3-56)||(6083220-6083271)
chr3 (1-55)||(9583500-9583553)
chr3 (1-55)||(11029662-11029715)
chr3 (2-55)||(24751752-24751803)
chr3 (3-56)||(24910367-24910418)
chr3 (2-55)||(44037522-44037573)
chr3 (3-55)||(47408839-47408889)
chr3 (3-55)||(53583960-53584010)
chr3 (1-56)||(28266524-28266577)
chr3 (1-56)||(32590970-32591023)
chr3 (1-56)||(40559672-40559725)
chr3 (1-51)||(1242220-1242268)
chr3 (1-56)||(8792806-8792860)
chr3 (1-55)||(27002817-27002869)
chr3 (1-55)||(43605653-43605705)
chr3 (1-55)||(43898040-43898092)
chr3 (1-55)||(46894812-46894864)
chr3 (2-55)||(2900254-2900305)
chr3 (1-43)||(3440736-3440777)
chr3 (3-55)||(14868934-14868983)
chr3 (1-58)||(19921389-19921444)
chr3 (2-55)||(47410830-47410881)
chr3 (1-49)||(10473991-10474037)
chr3 (1-57)||(12088359-12088413)
chr3 (11-55)||(21402745-21402787)
chr3 (1-56)||(2789055-2789108)
chr3 (1-56)||(8826623-8826676)
chr3 (1-56)||(10047870-10047923)
chr3 (1-52)||(12948812-12948861)
chr3 (1-56)||(17373669-17373722)
chr3 (1-56)||(24273957-24274010)
chr3 (1-56)||(35069311-35069364)
chr3 (1-56)||(40193033-40193086)
chr3 (2-56)||(42296710-42296761)
chr3 (1-52)||(46311520-46311569)
chr3 (1-52)||(50238917-50238966)
[»] chr6 (33 HSPs)
chr6 (1-56)||(16496729-16496783)
chr6 (1-56)||(8448219-8448272)
chr6 (1-56)||(8457023-8457076)
chr6 (1-56)||(31205260-31205313)
chr6 (2-56)||(17534601-17534653)
chr6 (2-55)||(2314677-2314728)
chr6 (1-57)||(735442-735496)
chr6 (1-56)||(4480472-4480525)
chr6 (1-56)||(13540238-13540291)
chr6 (1-52)||(18861844-18861893)
chr6 (2-52)||(1241597-1241645)
chr6 (1-55)||(4083586-4083638)
chr6 (2-56)||(8939624-8939676)
chr6 (1-55)||(10263148-10263200)
chr6 (2-55)||(10181044-10181095)
chr6 (5-55)||(31444371-31444420)
chr6 (1-56)||(13507387-13507440)
chr6 (1-56)||(32643805-32643858)
chr6 (1-55)||(4996871-4996923)
chr6 (1-55)||(5603524-5603576)
chr6 (1-55)||(7098805-7098857)
chr6 (1-55)||(8329635-8329687)
chr6 (1-56)||(10330802-10330856)
chr6 (2-52)||(21513074-21513122)
chr6 (2-52)||(32107913-32107961)
chr6 (2-55)||(4891007-4891058)
chr6 (9-62)||(2018847-2018899)
chr6 (2-55)||(8977153-8977205)
chr6 (1-57)||(16244408-16244462)
chr6 (1-56)||(8116823-8116876)
chr6 (1-29)||(9949228-9949256)
chr6 (1-56)||(11242674-11242727)
chr6 (1-56)||(28594148-28594201)
[»] chr5 (59 HSPs)
chr5 (1-56)||(21728658-21728712)
chr5 (1-55)||(23074721-23074774)
chr5 (1-56)||(2103024-2103077)
chr5 (1-56)||(28143309-28143362)
chr5 (1-56)||(36726987-36727040)
chr5 (1-56)||(42068539-42068592)
chr5 (1-55)||(1244258-1244310)
chr5 (2-56)||(4164957-4165009)
chr5 (1-55)||(6672240-6672292)
chr5 (2-56)||(12878196-12878248)
chr5 (1-55)||(17869201-17869253)
chr5 (1-55)||(18473913-18473965)
chr5 (1-55)||(23311250-23311302)
chr5 (1-55)||(36569278-36569330)
chr5 (1-55)||(41562457-41562509)
chr5 (1-55)||(1277436-1277489)
chr5 (3-55)||(1833398-1833449)
chr5 (1-52)||(9902578-9902627)
chr5 (1-60)||(12707953-12708010)
chr5 (1-56)||(25328381-25328434)
chr5 (1-52)||(29119608-29119657)
chr5 (3-55)||(40318864-40318915)
chr5 (3-55)||(41408625-41408676)
chr5 (1-56)||(42448209-42448262)
chr5 (1-55)||(9054048-9054100)
chr5 (1-55)||(22620728-22620780)
chr5 (1-55)||(40044993-40045045)
chr5 (1-58)||(23310396-23310451)
chr5 (4-49)||(8595567-8595611)
chr5 (1-56)||(1269596-1269649)
chr5 (1-52)||(10393579-10393628)
chr5 (1-56)||(24652391-24652444)
chr5 (1-56)||(39151003-39151056)
chr5 (2-56)||(671137-671189)
chr5 (1-55)||(1650290-1650342)
chr5 (3-56)||(4444927-4444977)
chr5 (1-55)||(4617843-4617895)
chr5 (1-55)||(16496599-16496651)
chr5 (1-55)||(26267078-26267130)
chr5 (1-55)||(33617095-33617147)
chr5 (1-55)||(36136939-36136991)
chr5 (1-56)||(36790392-36790446)
chr5 (1-51)||(37940921-37940969)
chr5 (2-55)||(6029611-6029662)
chr5 (1-58)||(11968772-11968827)
chr5 (1-55)||(15067217-15067270)
chr5 (2-55)||(24443945-24443996)
chr5 (2-55)||(42337921-42337972)
chr5 (1-57)||(12665092-12665146)
chr5 (4-49)||(22792190-22792234)
chr5 (1-58)||(25567759-25567815)
chr5 (1-42)||(34856592-34856632)
chr5 (1-53)||(38682929-38682979)
chr5 (1-60)||(12769202-12769259)
chr5 (1-52)||(19836164-19836213)
chr5 (1-56)||(29806565-29806618)
chr5 (1-56)||(37067699-37067752)
chr5 (1-56)||(39143439-39143492)
chr5 (6-49)||(40595962-40596003)
[»] chr8 (52 HSPs)
chr8 (1-70)||(2733600-2733667)
chr8 (1-55)||(11100365-11100417)
chr8 (2-56)||(38070559-38070611)
chr8 (2-55)||(4430813-4430864)
chr8 (2-55)||(6317299-6317350)
chr8 (1-55)||(25063338-25063391)
chr8 (4-56)||(4977114-4977164)
chr8 (1-57)||(8569942-8569996)
chr8 (1-56)||(3054022-3054075)
chr8 (1-56)||(14188088-14188141)
chr8 (1-56)||(25199044-25199097)
chr8 (1-56)||(25250783-25250836)
chr8 (1-52)||(26690696-26690745)
chr8 (1-56)||(33067465-33067518)
chr8 (1-56)||(36586480-36586533)
chr8 (1-52)||(37295128-37295177)
chr8 (1-55)||(4312132-4312184)
chr8 (2-56)||(7772128-7772180)
chr8 (1-55)||(19649575-19649627)
chr8 (1-55)||(24654973-24655025)
chr8 (1-55)||(27928157-27928209)
chr8 (1-55)||(34711632-34711684)
chr8 (2-56)||(38953558-38953610)
chr8 (1-55)||(43820867-43820919)
chr8 (2-55)||(8547208-8547259)
chr8 (1-55)||(24242662-24242715)
chr8 (2-55)||(26737970-26738021)
chr8 (1-55)||(27849819-27849872)
chr8 (1-58)||(37708524-37708579)
chr8 (2-51)||(44814866-44814913)
chr8 (1-57)||(2442759-2442813)
chr8 (1-53)||(6845060-6845110)
chr8 (1-56)||(26226789-26226841)
chr8 (1-52)||(25213631-25213680)
chr8 (1-52)||(25893853-25893902)
chr8 (1-56)||(31639179-31639232)
chr8 (1-52)||(34540141-34540190)
chr8 (1-51)||(10096615-10096663)
chr8 (2-56)||(18040134-18040186)
chr8 (1-55)||(41562441-41562493)
chr8 (1-50)||(9569728-9569775)
chr8 (3-56)||(9998722-9998773)
chr8 (3-52)||(26675559-26675606)
chr8 (4-49)||(1522697-1522741)
chr8 (1-58)||(16816821-16816877)
chr8 (1-49)||(37953788-37953834)
chr8 (1-56)||(34143431-34143484)
chr8 (1-56)||(34744343-34744396)
chr8 (1-56)||(35810235-35810288)
chr8 (1-56)||(37817374-37817427)
chr8 (1-52)||(39666972-39667021)
chr8 (2-49)||(40216783-40216830)
[»] chr1 (43 HSPs)
chr1 (1-55)||(270398-270451)
chr1 (1-57)||(28999371-28999425)
chr1 (1-57)||(29005087-29005141)
chr1 (1-56)||(10635487-10635540)
chr1 (1-56)||(19338255-19338308)
chr1 (1-56)||(40958651-40958704)
chr1 (1-56)||(42631062-42631115)
chr1 (1-56)||(48391954-48392007)
chr1 (1-55)||(43676101-43676153)
chr1 (2-55)||(40809291-40809342)
chr1 (2-55)||(48314166-48314217)
chr1 (1-56)||(17068150-17068203)
chr1 (2-52)||(24119658-24119706)
chr1 (1-55)||(43086548-43086600)
chr1 (1-55)||(49948240-49948292)
chr1 (2-55)||(5598300-5598351)
chr1 (1-51)||(39606407-39606456)
chr1 (2-55)||(49500860-49500911)
chr1 (1-57)||(4126572-4126626)
chr1 (1-57)||(18475106-18475160)
chr1 (3-55)||(26261372-26261422)
chr1 (2-58)||(50248025-50248079)
chr1 (1-52)||(3315796-3315845)
chr1 (1-49)||(10430416-10430463)
chr1 (1-56)||(15906244-15906297)
chr1 (1-56)||(30455202-30455255)
chr1 (1-56)||(32880656-32880709)
chr1 (1-56)||(34010092-34010145)
chr1 (2-57)||(40685526-40685579)
chr1 (6-49)||(7204590-7204632)
chr1 (1-55)||(25821027-25821079)
chr1 (1-55)||(35010666-35010718)
chr1 (2-52)||(41445108-41445156)
chr1 (2-51)||(5790061-5790108)
chr1 (2-51)||(13555802-13555849)
chr1 (3-56)||(19279931-19279982)
chr1 (1-46)||(20164150-20164193)
chr1 (1-57)||(11403166-11403220)
chr1 (1-49)||(15331139-15331185)
chr1 (4-55)||(8214622-8214671)
chr1 (1-52)||(39522835-39522884)
chr1 (1-56)||(43025884-43025937)
chr1 (2-30)||(43907264-43907292)
[»] chr4 (45 HSPs)
chr4 (1-57)||(49535882-49535936)
chr4 (2-56)||(9569473-9569525)
chr4 (1-55)||(12821164-12821216)
chr4 (1-56)||(13632087-13632141)
chr4 (1-55)||(30044661-30044713)
chr4 (1-55)||(42856562-42856614)
chr4 (2-56)||(46488195-46488247)
chr4 (1-55)||(49882786-49882838)
chr4 (2-55)||(5397018-5397069)
chr4 (2-55)||(42154216-42154267)
chr4 (3-55)||(23974721-23974771)
chr4 (1-56)||(3848895-3848948)
chr4 (1-56)||(7512765-7512818)
chr4 (2-57)||(29428052-29428105)
chr4 (1-52)||(35828276-35828325)
chr4 (1-56)||(47462113-47462166)
chr4 (1-51)||(1033526-1033574)
chr4 (6-56)||(1982559-1982607)
chr4 (1-55)||(3084319-3084371)
chr4 (1-55)||(36526218-36526270)
chr4 (1-51)||(54907969-54908017)
chr4 (2-55)||(24550812-24550863)
chr4 (2-55)||(24712087-24712138)
chr4 (4-49)||(24870601-24870645)
chr4 (3-55)||(35318539-35318589)
chr4 (2-50)||(37166142-37166188)
chr4 (1-52)||(37050703-37050752)
chr4 (1-56)||(50779868-50779921)
chr4 (1-55)||(4379306-4379358)
chr4 (1-55)||(14285094-14285146)
chr4 (2-55)||(13389019-13389070)
chr4 (2-51)||(18813373-18813420)
chr4 (2-55)||(29648763-29648814)
chr4 (2-55)||(34684202-34684252)
chr4 (1-55)||(35273383-35273436)
chr4 (8-46)||(38882724-38882762)
chr4 (1-54)||(42412065-42412116)
chr4 (9-55)||(55853399-55853444)
chr4 (3-55)||(28010130-28010180)
chr4 (1-49)||(28033197-28033243)
chr4 (9-56)||(1083506-1083551)
chr4 (1-56)||(12694521-12694574)
chr4 (5-56)||(26440965-26441014)
chr4 (1-56)||(49319729-49319782)
chr4 (1-52)||(52556460-52556509)
[»] scaffold0402 (1 HSPs)
scaffold0402 (1-56)||(1318-1371)
[»] chr2 (46 HSPs)
chr2 (1-56)||(38490477-38490530)
chr2 (1-55)||(20251562-20251614)
chr2 (1-55)||(32023251-32023303)
chr2 (1-55)||(36754818-36754870)
chr2 (2-55)||(15897213-15897264)
chr2 (2-55)||(23080176-23080227)
chr2 (2-55)||(34667043-34667094)
chr2 (2-55)||(42160335-42160386)
chr2 (3-55)||(2287388-2287438)
chr2 (1-57)||(7975091-7975145)
chr2 (2-57)||(13268053-13268106)
chr2 (1-56)||(33607041-33607094)
chr2 (1-56)||(35476567-35476620)
chr2 (1-56)||(40592311-40592364)
chr2 (1-52)||(11543876-11543926)
chr2 (1-55)||(12236120-12236172)
chr2 (1-55)||(35687863-35687915)
chr2 (2-56)||(42200940-42200992)
chr2 (2-55)||(6731541-6731592)
chr2 (1-54)||(39070019-39070070)
chr2 (1-57)||(44948016-44948070)
chr2 (1-56)||(727366-727419)
chr2 (1-56)||(18999327-18999380)
chr2 (1-52)||(34481748-34481797)
chr2 (2-61)||(39310359-39310416)
chr2 (1-56)||(42007292-42007345)
chr2 (2-57)||(43035437-43035490)
chr2 (1-55)||(7958061-7958113)
chr2 (1-55)||(10392644-10392696)
chr2 (2-52)||(16368766-16368814)
chr2 (1-56)||(19134593-19134647)
chr2 (2-56)||(23497590-23497642)
chr2 (2-56)||(23957050-23957102)
chr2 (2-56)||(45049383-45049435)
chr2 (3-56)||(4014892-4014943)
chr2 (1-55)||(7607317-7607370)
chr2 (3-56)||(18368792-18368843)
chr2 (2-55)||(35706851-35706902)
chr2 (3-56)||(41164727-41164778)
chr2 (4-56)||(31516285-31516335)
chr2 (3-51)||(34242530-34242576)
chr2 (9-49)||(3680862-3680902)
chr2 (1-56)||(11816853-11816906)
chr2 (1-56)||(28855491-28855544)
chr2 (1-56)||(31054046-31054099)
chr2 (1-52)||(43461411-43461460)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-55)||(9366-9418)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-56)||(160445-160499)
[»] scaffold0179 (1 HSPs)
scaffold0179 (1-56)||(4092-4145)
[»] scaffold0013 (1 HSPs)
scaffold0013 (2-56)||(90567-90619)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-55)||(39390-39442)
[»] scaffold0457 (1 HSPs)
scaffold0457 (2-51)||(6782-6829)
[»] scaffold0061 (1 HSPs)
scaffold0061 (2-55)||(8937-8988)
[»] scaffold0778 (1 HSPs)
scaffold0778 (1-51)||(821-869)
[»] scaffold0595 (1 HSPs)
scaffold0595 (1-55)||(344-396)
[»] scaffold0882 (1 HSPs)
scaffold0882 (1-50)||(3774-3821)
[»] scaffold0163 (1 HSPs)
scaffold0163 (1-56)||(26994-27047)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-55)||(195739-195790)


Alignment Details
Target: scaffold0287 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1135 - 1193
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactata 61  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  1135 gcatccggcctaacaatttcggcatttt--gccagttgagctaggacttctggatactata 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3497594 - 3497652
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactata 61  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  3497594 gcatccggcctaacaatttcggcatttt--gccagttgagctaggacttctggatactata 3497652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40656185 - 40656240
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  40656185 gcatccggcctaacaatatcggcattttttgccagttgagctaggacttctagata 40656240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4887590 - 4887643
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  4887590 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 4887643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 45236980 - 45236927
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  45236980 catccggcctaacaatttcggcatttt--gccagttgagctaggacttctggatac 45236927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 2354875 - 2354927
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  2354875 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 2354927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 35157162 - 35157214
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  35157162 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 35157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40013315 - 40013261
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  40013315 gcatccggcctaacaatttcggcat-ttttgtcagttgagctaggacttctggata 40013261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48612568 - 48612516
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  48612568 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 48612516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 9234327 - 9234377
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggacttctgga 54  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  9234327 tccggcctaacaatttcggcatttttttccagttgagctaggacttgtgga 9234377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27396391 - 27396442
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctgga 54  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  27396391 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctgga 27396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33228751 - 33228698
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  33228751 gcatccggcctaacaatttcgacattttt-gccagttgagctaggacttctggat 33228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 48729762 - 48729813
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  48729762 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 48729813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1573918 - 1573971
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  1573918 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggata 1573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4106605 - 4106552
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  4106605 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggata 4106552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6596593 - 6596540
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  6596593 gcatccggcctaacaattttggcatttt--gccagttgagctaggacttctggata 6596540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29151634 - 29151581
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||    
T  29151634 gcatccggcctaacaatttcagcatttt--gccagttgagctaggacttctggata 29151581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35849346 - 35849293
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||    
T  35849346 gcatccggcctaacaatttcggcacttt--gccagttgagctaggacttctggata 35849293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 9380041 - 9379989
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  9380041 catccggcctaacaatttcgacatttt--gccagttgagctaggacttctggata 9379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10061093 - 10061145
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  10061093 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttgtggat 10061145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19306763 - 19306711
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||    
T  19306763 gcatccggcctaataatttcggcatttt--gccagttgagctaggacttctggat 19306711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31717348 - 31717296
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  |||| |||| |||||||||||||||||||    
T  31717348 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggat 31717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 1323733 - 1323682
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  1323733 catccggcctaacaaattcggcatttt--gccagttgagctaggacttctggat 1323682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1869867 - 1869818
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  1869867 gcatccggcctaacaatatcggcat-ttttgccagttgagctaggacttct 1869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 18944973 - 18944922
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  18944973 atccggcctaacaatttcggca--ttttgccagttgaactaggacttctggata 18944922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 40809095 - 40809044
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  40809095 catccggcctaacaaattcggcatttt--gccagttgagctaggacttctggat 40809044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33512848 - 33512802
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  33512848 gcatccggcctaacaatttcggca--ttttgccagttgagctaggactt 33512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37410780 - 37410834
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    |||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||||||    
T  37410780 catccggcctaacaatttcggca--ttttgccagttgagctaagacttctagatact 37410834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47584748 - 47584802
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||    
T  47584748 gcatccggcctaacaatgtcgacatttt--gccagttgagctaggacttctggatac 47584802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4069193 - 4069246
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||  | ||||||||| |||| |||||||||||||||    
T  4069193 gcatccggcctaacaatttcgg--tattttgccagttgagttaggacttctggata 4069246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17895685 - 17895632
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| |||  ||||||||| |||||||||||||| |||||    
T  17895685 gcatccggcctaacaatttcagca--ttttgccagttgagctaggacttcaggata 17895632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47086377 - 47086432
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||| || |||||| ||| ||||||||||||| |||||||    
T  47086377 gcatccggcctaacaatttcgaca-tttttgtcagttgagctaggacttatggatac 47086432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 7312531 - 7312579
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||| ||||  ||||||||| ||||||||||||||||    
T  7312531 catccggcctaacaattttggca--ttttgccagttgagctaggacttctg 7312579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10166921 - 10166873
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||||||||||||||||||| |  ||| |||||||||||||||    
T  10166921 gcatccggcctaacaatttcggcattttat--cagttgagctaggacttct 10166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34708725 - 34708671
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  34708725 gcatccagcctaacaatatcggcattttt-gccagttgagctaggacttctagata 34708671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42557579 - 42557631
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||||||| |||||    
T  42557579 gcatccggcctaacaatttcggca--ttttgccaattgagctaggacttatggat 42557631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45041810 - 45041862
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  45041810 gcatccgacctaacaatttcggca--ttttgccagttgagctaagacttctggat 45041862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46416600 - 46416548
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||| ||||||  ||||||||| ||| |||||||||||||||    
T  46416600 gcatccggcctaacaatgtcggca--ttttgccagttgacctaggacttctggat 46416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 2228158 - 2228209
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||| ||  ||||||||| ||||||| |||||||||||    
T  2228158 catccggcctaacaatttcgaca--ttttgccagttgagctacgacttctggat 2228209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23789490 - 23789539
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||| |||||| |||||||||| ||| |||||||||||    
T  23789490 gcatccggcctaacaatatcggca-tttttgccagttgaactaggacttct 23789539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 31300075 - 31300126
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||| ||||||||||||||  ||||||||| | |||||||||||||||||    
T  31300075 catccggcttaacaatttcggca--ttttgccagtttagctaggacttctggat 31300126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43188581 - 43188528
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||| |||||||||||||||||||| ||||||||  |||||||| ||||||||||    
T  43188581 gcatgcggcctaacaatttcggcat-ttttgccacttgagctagtacttctggat 43188528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8946479 - 8946450
Alignment:
Q  1 gcatccggcctaacaatttcggcatttttt 30  Q
    ||||||||||||||||||||||||||||||    
T  8946479 gcatccggcctaacaatttcggcatttttt 8946450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21226116 - 21226070
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  21226116 gcatccggcctaacaatttcggca--ttttgccagttgagataggactt 21226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 19258475 - 19258447
Alignment:
Q  1 gcatccggcctaacaatttcggcattttt 29  Q
    |||||||||||||||||||||||||||||    
T  19258475 gcatccggcctaacaatttcggcattttt 19258447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29628461 - 29628514
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||| |||||||||||||||  |||| ||||||||||||||| ||||    
T  29628461 gcatccgacctaataatttcggcattttt--ccagttgagctaggacttctagata 29628514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38261052 - 38261003
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  38261052 gcatccggcctaacaatttcgaca--ttttgtcagttgagctaggacttctg 38261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28171056 - 28171111
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  28171056 gcatccggcctaacaatttcggca-tttttgccagttgagctaggacttctggatac 28171111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6583312 - 6583369
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactat 60  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  6583312 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggatgctat 6583369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8381130 - 8381077
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  8381130 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 8381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13525220 - 13525167
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  13525220 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 13525167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46838804 - 46838857
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  46838804 gcatccggcctaacaatttcggcattttt--ccagttgagctaggacttctggata 46838857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 2687609 - 2687557
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  2687609 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 2687557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4232254 - 4232306
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  4232254 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 4232306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4833186 - 4833238
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  4833186 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 4833238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47069058 - 47069004
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  47069058 gcatccggcctaacaatttcggcat-ttttgccagttgagctaagacttctggata 47069004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 3917816 - 3917765
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  3917816 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 3917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11751263 - 11751210
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  11751263 gcatccggcctaacaatttcggcat-ttttgccagttgagctaggacttatggat 11751210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40840220 - 40840171
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  40840220 gcatccggcctaacaatttcggcat-ttttgccagttgagctaggacttct 40840171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8507983 - 8507929
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||    
T  8507983 gcatccggcctaacaatttcggcattttt--ccagttgagctaagacttctggatac 8507929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24250776 - 24250722
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  24250776 gcatccggcctaacaatttcggca--ttttgccaattgagctaggacttctggatac 24250722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4976785 - 4976838
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  4976785 gcatccggcctaacaattttggcatttt--gccagttgagctaggacttctggata 4976838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24650624 - 24650677
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  24650624 gcatccggcctaacaatttcggca--ttttgccagttgaggtaggacttctggata 24650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29212142 - 29212195
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  29212142 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttatggata 29212195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30553045 - 30553098
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  30553045 gcatccggtctaacaatttcggcatttt--gccagttgagctaggacttctggata 30553098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41464715 - 41464662
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  41464715 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggata 41464662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11312641 - 11312593
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  11312641 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttct 11312593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17500978 - 17500926
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||||||||  |||| |||| ||||||||||||||    
T  17500978 gcatccggcctaacaatttcggcattttt--ccagttgagttaggacttctggat 17500926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22371501 - 22371449
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  22371501 gcatccggcctaacaatttcggca--ttttgccagttgaggtaggacttctggat 22371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27396905 - 27396853
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  27396905 gcatccggcctaacaatttcggca--ttttgtcagttgagctaggacttctggat 27396853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32961055 - 32961107
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  32961055 gcatctggcctaacaatttcggcatttt--gccagttgagctaggacttctggat 32961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 34397730 - 34397678
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  34397730 catccggcctaacaatttcggca--ttttgccagttgaactaggacttctggata 34397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38127919 - 38127971
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  38127919 gcatccggcctaacaatttcgacatttt--gccagttgagctaggacttctggat 38127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54097517 - 54097569
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||    
T  54097517 gcatccggcctaacaatttcggca--ttttgccatttgagctaggacttctggat 54097569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 6083220 - 6083271
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||  |||||| || ||||||||||||||||||||    
T  6083220 atccggcctaacaatttcggca--ttttgctagttgagctaggacttctggata 6083271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9583500 - 9583553
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||| |||||||||| ||||||| | |||||||||    
T  9583500 gcatccggcctaacaatttcggca-tttttgccagttgagctaaggcttctggat 9583553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11029715 - 11029662
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  11029715 gcatccagcctaacaatttcgacattttt-gccagttgagctaggacttctggat 11029662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24751803 - 24751752
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  24751803 catccggcctaacaatttcggca--ttttgccagttgagctaggacttgtggat 24751752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 24910367 - 24910418
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||| |||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  24910367 atccagcctaacaatttcggcatttt--gccagttgagctaggacttctggata 24910418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 44037522 - 44037573
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  44037522 catccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 44037573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 47408889 - 47408839
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  47408889 atccggcctaacaatttcggca--ttttgctagttgagctaggacttctggat 47408839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 53584010 - 53583960
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  53584010 atccggcctaacaatttcgacatttt--gccagttgagctaggacttctggat 53583960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28266577 - 28266524
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| |||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  28266577 gcatccagcctaacaatttcggca--ttttgtcagttgagctaggacttctggata 28266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32591023 - 32590970
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||||||    
T  32591023 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctggata 32590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40559725 - 40559672
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| |||||||||||||||||||| |  ||| ||||||||||||||||||||    
T  40559725 gcatccgacctaacaatttcggcattttat--cagttgagctaggacttctggata 40559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1242268 - 1242220
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||| ||||||||||  ||||||||| |||||||||||||||    
T  1242268 gcatccggcctaataatttcggca--ttttgccagttgagctaggacttct 1242220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8792806 - 8792860
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| ||||||||||||||||| ||||| || | ||||||||||||||||||||    
T  8792806 gcatccagcctaacaatttcggca-tttttaccggttgagctaggacttctggata 8792860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27002817 - 27002869
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||| |||||||||||||| |||  ||||| |||||||||||||||||||    
T  27002817 gcatccggcttaacaatttcggcacttt--gccagttgagctaggacttctggat 27002869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43605653 - 43605705
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||| ||| |||||||  ||||| |||||||||||||||||||    
T  43605653 gcatccggcctaacaaattcagcatttt--gccagttgagctaggacttctggat 43605705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43898040 - 43898092
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||| | | |||||||||||||||||||    
T  43898040 gcatccggcctaacaatttcggca--ttttgtctgttgagctaggacttctggat 43898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46894864 - 46894812
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||  || ||||| ||| |||||||||||||||||||    
T  46894864 gcatccggcctaacaatttcg--atattttgtcagttgagctaggacttctggat 46894812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 2900305 - 2900254
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||| ||||||||||||||  |||||||||  ||||||||||||||||||    
T  2900305 catccggcttaacaatttcggca--ttttgccagtggagctaggacttctggat 2900254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3440777 - 3440736
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagcta 43  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  3440777 gcatccggcctaacaatttcggcat-ttttgccagttgagcta 3440736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 14868934 - 14868983
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||| ||||||||||||||||||||   ||||| |||||||||||||||||||    
T  14868934 atccagcctaacaatttcggcattt---gccagttgagctaggacttctggat 14868983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19921389 - 19921444
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    ||||||| |||||||||||| |||||||  ||||  ||||||||||||||||||||||    
T  19921389 gcatccgacctaacaatttcagcatttt--gccaattgagctaggacttctggatact 19921444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 47410830 - 47410881
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  47410830 catccgacctaacaatttcgacatttt--gccagttgagctaggacttctggat 47410881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10473991 - 10474037
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    |||||||||||||||||||| |||  ||||||||| |||||||||||||    
T  10473991 gcatccggcctaacaatttcagca--ttttgccagttgagctaggactt 10474037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12088359 - 12088413
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||| |||||||  |||  ||| |||||||||||||||||    
T  12088359 gcatccggcctaacaatttcgacattttt--ccaagtgatctaggacttctggatac 12088413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 21402745 - 21402787
Alignment:
Q  11 taacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||    
T  21402745 taacaatttcggcatttt--gccagttgagctaggacttctggat 21402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2789055 - 2789108
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||| ||||||||||||||  ||||| ||| ||||||||||||||||    
T  2789055 gcatcaggcctaataatttcggcatttt--gccagttgaactaggacttctggata 2789108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8826676 - 8826623
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||| |||||||||||||||  ||||| | | ||||||||||||||||||||    
T  8826676 gcatccggtctaacaatttcggca--ttttgtccgttgagctaggacttctggata 8826623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10047923 - 10047870
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||| ||||||||||||||  |||| |||  ||||||||||||||||||||    
T  10047923 gcatccggcataacaatttcggca--ttttaccaattgagctaggacttctggata 10047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12948861 - 12948812
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||    
T  12948861 gcatccggcctaacaatttcgtca--ttttaccagttgagctaggacttctg 12948812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17373722 - 17373669
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||| ||||||||||||||  |||| |||||||||||| ||||| ||||||    
T  17373722 gcatccggcttaacaatttcggca--ttttaccagctgagctaagacttgtggata 17373669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24273957 - 24274010
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||| ||| |||| |||||||||| ||||    
T  24273957 gcatccggcctaacaatttcggca--ttttgtcagttgagttaggacttctagata 24274010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35069364 - 35069311
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||| ||| ||||||| ||||    
T  35069364 gcatccggcctaacaatttcggca--ttttgccagttgaactaagacttcttgata 35069311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40193033 - 40193086
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  |||| |||| | ||||||||||||||||||    
T  40193033 gcatccggcctaacaatttcgaca--ttttaccagttaagctaggacttctggata 40193086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 42296761 - 42296710
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||| ||||||||    ||| ||||||||||||||||||||    
T  42296761 catccggcctaacaattttggcatttt---gcagttgagctaggacttctggata 42296710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46311520 - 46311569
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||    
T  46311520 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctg 46311569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50238917 - 50238966
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||    
T  50238917 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctg 50238966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16496729 - 16496783
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  16496729 gcatccggcctaacaatttcggca-tttttgccagttgagctaggacttctggata 16496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8448219 - 8448272
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  8448219 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 8448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8457023 - 8457076
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  8457023 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 8457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31205260 - 31205313
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  31205260 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 31205313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 17534601 - 17534653
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  17534601 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 17534653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 2314677 - 2314728
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  2314677 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 2314728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 735496 - 735442
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  735496 gcatccggcctaacaatttcggca--ttttgccagttgagctagaacttctggatac 735442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4480525 - 4480472
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  4480525 gcatccggcctaacaatttcggca--ttttgccagttgagttaggacttctggata 4480472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13540238 - 13540291
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||    
T  13540238 gcatccggcctaacaatttcggca--ttttgccatttgagctaggacttctggata 13540291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18861844 - 18861893
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  18861844 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 18861893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 1241645 - 1241597
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  1241645 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 1241597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4083638 - 4083586
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  4083638 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 4083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8939676 - 8939624
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  8939676 catccgacctaacaatttcggcatttt--gccagttgagctaggacttctggata 8939624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10263148 - 10263200
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  10263148 gcatccggcctaacaatttcggca--ctttgccagttgagctaggacttctggat 10263200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 10181095 - 10181044
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  10181095 catccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 10181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 31444371 - 31444420
Alignment:
Q  5 ccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  31444371 ccggcctaacaatttcggca-tttttgccggttgagctaggacttctggat 31444420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13507387 - 13507440
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| |||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  13507387 gcatccagcctaacaatttcggca--ttttcccagttgagctaggacttctggata 13507440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32643805 - 32643858
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||| |||| |||| |||||||||||||||    
T  32643805 gcatccggcctaacaatttcggca--ttttaccagttgagttaggacttctggata 32643858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4996923 - 4996871
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||| |||  ||||| ||| |||||||||||||||||||    
T  4996923 gcatccggcctaacaatttcagca--ttttgtcagttgagctaggacttctggat 4996871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5603524 - 5603576
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||| |||||||||||||||  |||| |||||||| ||||||||||    
T  5603524 gcatccggcctaataatttcggcattttt--ccagttgagctagaacttctggat 5603576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7098857 - 7098805
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||  |||| |||| |||||||||||||||||||    
T  7098857 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctggat 7098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8329635 - 8329687
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  | ||||||| ||||||||||||| |||||    
T  8329635 gcatccggcctaacaatttcggca--tattgccagttgagctaggacttttggat 8329687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10330856 - 10330802
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||||||||| ||||||||| ||||| ||||||||||||| ||||||    
T  10330856 gcatctggcctaacaattttggcattttt-gccagttgagctaggacttgtggata 10330802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21513122 - 21513074
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||||| ||  ||||||||| ||||||||||||||||    
T  21513122 catccggcctaacaatttcgaca--ttttgccagttgagctaggacttctg 21513074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 32107913 - 32107961
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||||||||    
T  32107913 catccagcctaacaatttcggca--ttttgccagttgagctaggacttctg 32107961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 4891058 - 4891007
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||| |||||||||||||||||||||||  |||| ||||||| |||||||||||    
T  4891058 catctggcctaacaatttcggcattttt--ccagttgagctaagacttctggat 4891007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 2018847 - 2018899
Alignment:
Q  9 cctaacaatttcggcattttttgccagctgagctaggacttctggatactataa 62  Q
    ||||||||||||| |||||||  |||| |||||||||||||||||||| |||||    
T  2018847 cctaacaatttcgacattttta-ccagttgagctaggacttctggatattataa 2018899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 8977205 - 8977153
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||| |||| |||||||||| ||||||| ||||| |||||    
T  8977205 catccggcctaacaatttgggca-tttttgccagttgagctaagacttgtggat 8977153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16244462 - 16244408
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||| |||||||||||||||||  ||||||||| ||| |||||||||||| ||||    
T  16244462 gcatccagcctaacaatttcggca--ttttgccagttgatctaggacttctgaatac 16244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8116823 - 8116876
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||  || ||||||||| | ||||||||||| ||||||    
T  8116823 gcatccggcctaacaatttcg--atattttgccagttaagctaggacttgtggata 8116876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9949228 - 9949256
Alignment:
Q  1 gcatccggcctaacaatttcggcattttt 29  Q
    |||||||||||||||||||||||||||||    
T  9949228 gcatccggcctaacaatttcggcattttt 9949256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11242674 - 11242727
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| |||||||||||||||||||| |   || ||||||||||||||||||||    
T  11242674 gcatccgtcctaacaatttcggcattttat--tagttgagctaggacttctggata 11242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28594148 - 28594201
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| | ||||  ||||| |||| |||||||||||||||    
T  28594148 gcatccggcctaacaatttcgacctttt--gccagttgagttaggacttctggata 28594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21728712 - 21728658
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  21728712 gcatccggcctaacaatttcggcat-ttttgccagttgagctaggacttctggata 21728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23074721 - 23074774
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  23074721 gcatccggcctaacaatttcggca-tttttgccagttgagctaggacttctggat 23074774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2103077 - 2103024
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  2103077 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 2103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28143309 - 28143362
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  28143309 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 28143362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36727040 - 36726987
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  36727040 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 36726987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42068592 - 42068539
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  42068592 gcatccagcctaacaatttcggcatttt--gccagctgagctaggacttctggata 42068539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1244258 - 1244310
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  1244258 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 1244310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 4165009 - 4164957
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  4165009 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 4164957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6672292 - 6672240
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  6672292 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 6672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 12878196 - 12878248
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  12878196 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 12878248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17869201 - 17869253
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  17869201 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 17869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18473965 - 18473913
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  18473965 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 18473913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23311250 - 23311302
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  23311250 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 23311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36569330 - 36569278
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  36569330 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 36569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41562509 - 41562457
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  41562509 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 41562457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1277489 - 1277436
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  1277489 gcatccggcctaacaatttcggcat-ttttggcagctgagctaggacttgtggat 1277436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 1833398 - 1833449
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  1833398 atccggcctaacaatttcggca-tttttgccagttgagctatgacttctggat 1833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9902578 - 9902627
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  9902578 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 9902627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12707953 - 12708010
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactat 60  Q
    ||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||| ||||    
T  12707953 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggattctat 12708010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25328381 - 25328434
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  25328381 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctagata 25328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29119657 - 29119608
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  29119657 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 29119608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 40318864 - 40318915
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  40318864 atccggcctaacaatttcggca-tttttgccagttgagctatgacttctggat 40318915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 41408676 - 41408625
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  41408676 atccggcctaacaatttcggcat-ttttgccagttgagctatgacttctggat 41408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42448262 - 42448209
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  42448262 gcatccggcctaacaatttcgacatttt--gccagttgagctaggacttctggata 42448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9054048 - 9054100
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  9054048 gcatccggcctaacaatttcggtatttt--gccagttgagctaggacttctggat 9054100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22620728 - 22620780
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  22620728 gcatccggcctaacaatttcggca--ttttgtcagttgagctaggacttctggat 22620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40044993 - 40045045
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||    
T  40044993 gcatccgacctaacaatttcggcatttt--gccagctgagctagaacttctggat 40045045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23310451 - 23310396
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    ||||||||||||||||||| || |||||  ||||| ||||||||||||||||||||||    
T  23310451 gcatccggcctaacaattttggtatttt--gccagttgagctaggacttctggatact 23310396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8595567 - 8595611
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  8595567 tccggcctaacaatttcggca-tttttgccagttgagctaggactt 8595611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1269596 - 1269649
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  ||||| ||| ||||||||||||||||||||    
T  1269596 gcatccggcctaacaatttcgaca--ttttgtcagttgagctaggacttctggata 1269649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10393579 - 10393628
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||| |||||||||||||||  |||| ||||||||||||||||    
T  10393579 gcatccggcctaataatttcggcattttt--ccagttgagctaggacttctg 10393628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24652391 - 24652444
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  ||||||||| |||| |||||||||||||||    
T  24652391 gcatccggcctaacaatttcgaca--ttttgccagttgagttaggacttctggata 24652444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39151003 - 39151056
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||||||    
T  39151003 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctggata 39151056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 671137 - 671189
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||| ||||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  671137 catccgacctaacaatttcggca--ttttgccagttgaactaggacttctggata 671189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1650342 - 1650290
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||  | |||||||||||||||||||    
T  1650342 gcatccggcctaacaatttcggca--ttttgcaggttgagctaggacttctggat 1650290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 4444927 - 4444977
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||| ||||||||||||||||||||   ||||| ||||||||||||||||||||    
T  4444927 atccagcctaacaatttcggcattt---gccagttgagctaggacttctggata 4444977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4617843 - 4617895
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||  |||| |||| |||||||||||||||||||    
T  4617843 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctggat 4617895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16496651 - 16496599
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||  ||||||||| ||| |||||||||||||||    
T  16496651 gcatccggcctaacaatttcgaca--ttttgccagttgaactaggacttctggat 16496599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26267078 - 26267130
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||| |||||||||||    
T  26267078 gcatccggcttaacaatttcggca--ttttgccagttgagctacgacttctggat 26267130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33617147 - 33617095
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||| ||||||  |||| |||| |||||||||||||||||||    
T  33617147 gcatccggcctaacaatgtcggca--ttttaccagttgagctaggacttctggat 33617095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36136939 - 36136991
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||| |||||||||||||||||||  |||||| || |||||||||||||||||||    
T  36136939 gcattcggcctaacaatttcggca--ttttgctagttgagctaggacttctggat 36136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36790392 - 36790446
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||| |||||||||| |||||||||| | ||||||||||||| ||||    
T  36790392 gcatccggcctaataatttcggca-tttttgccagttaagctaggacttctagata 36790446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37940969 - 37940921
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||||||||||    
T  37940969 gcatccggcctaacaatttcgaca--ttttgccagttgagctaggacttct 37940921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 6029662 - 6029611
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||| | ||||||  ||||| |||||||||||||||||||    
T  6029662 catccggcctaacaattttgacatttt--gccagttgagctaggacttctggat 6029611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11968827 - 11968772
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    ||||||||||||||||||||| ||  ||||| ||| |||| |||||||||||||||||    
T  11968827 gcatccggcctaacaatttcgaca--ttttgacagttgagttaggacttctggatact 11968772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15067217 - 15067270
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| |||||||| |||  |||||||||| ||||||||    
T  15067217 gcatccggcctaacaatttcgacatttttt-ccaattgagctaggaattctggat 15067270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 24443945 - 24443996
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| |||||||||||||| |||||  ||||| |||||||||||||||||||    
T  24443945 catccgacctaacaatttcggtatttt--gccagttgagctaggacttctggat 24443996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42337921 - 42337972
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||| ||||||||    
T  42337921 catccgacctaacaatttcggca--ttttgccagttgagctaggaattctggat 42337972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12665146 - 12665092
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||| ||||||||||  ||||| ||| ||| |||||||||||||||||    
T  12665146 gcatccggcctaataatttcggca--ttttgtcagttgaactaggacttctggatac 12665092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 22792190 - 22792234
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||    
T  22792190 tccgacctaacaatttcggca-tttttgccagttgagctaggactt 22792234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25567759 - 25567815
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    ||||||||||||| |||||| ||| |||||||||| ||| ||||||||| ||||||||    
T  25567759 gcatccggcctaataatttcagca-tttttgccagttgaactaggacttatggatact 25567815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34856632 - 34856592
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagct 42  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  34856632 gcatccggcctaacaatttcggcat-ttttgccagttgagct 34856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38682979 - 38682929
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctgg 53  Q
    |||||| |||||||||||| ||||||||  ||||| |||||||||||||||||    
T  38682979 gcatccagcctaacaattttggcatttt--gccagttgagctaggacttctgg 38682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12769202 - 12769259
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactat 60  Q
    ||||||| ||||||||||||||||  |||| |||| ||||||||||||| ||||| ||||    
T  12769202 gcatccgacctaacaatttcggca--ttttaccagttgagctaggacttttggattctat 12769259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19836164 - 19836213
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||| ||||||||||||| ||||||  ||||| ||||||||||||||||    
T  19836164 gcatccgacctaacaatttcgacatttt--gccagttgagctaggacttctg 19836213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29806618 - 29806565
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| ||||  |||| |||| |||||||||| |||||||||    
T  29806618 gcatccggcctaacaattttggca--ttttaccagttgagctaggatttctggata 29806565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37067752 - 37067699
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||| ||| |||| |||||||||| ||||    
T  37067752 gcatccggcctaacaatttcggca--ttttgtcagttgaggtaggacttctagata 37067699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39143492 - 39143439
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||| |||||||||||||||| ||||||  ||||| ||||||||||||| ||||||    
T  39143492 gcattcggcctaacaatttcgacatttt--gccagttgagctaggacttgtggata 39143439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 40596003 - 40595962
Alignment:
Q  6 cggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    |||||||||||||||||||  ||||||||| |||||||||||||    
T  40596003 cggcctaacaatttcggca--ttttgccagttgagctaggactt 40595962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2733667 - 2733600
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactataagtcccttt 70  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| ||||| | ||||||    
T  2733667 gcatccggcctaacaatttcggcatttt--gccagttgagctaggacttctggatcctatatggcccttt 2733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11100365 - 11100417
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  11100365 gcatccggcctaacaatttcggcattttt--ccagttgagctaggacttctggat 11100417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 38070559 - 38070611
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  38070559 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 38070611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 4430813 - 4430864
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  4430813 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 4430864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 6317350 - 6317299
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  6317350 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 6317299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25063391 - 25063338
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  25063391 gcatccggcctaacaatttcggcat-ttttgccagttgaactaggacttctggat 25063338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 4977114 - 4977164
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  4977114 tccggcctaacaatttcggcatttt--gccagttgagctaggacttctggata 4977164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8569996 - 8569942
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||    
T  8569996 gcatccggcctaacaatttcgg--tcttttgccagttgagctaggacttctggatac 8569942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3054075 - 3054022
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||    
T  3054075 gcatccggcctaacaatttcggca--ttttgccagttgagctagaacttctggata 3054022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14188141 - 14188088
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  14188141 gcatccggcctaacaatttcgacatttt--gccagttgagctaggacttctggata 14188088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25199097 - 25199044
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  25199097 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggata 25199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25250836 - 25250783
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  25250836 gcatccggcctaacaattttggcatttt--gccagttgagctaggacttctggata 25250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26690745 - 26690696
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  26690745 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 26690696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33067465 - 33067518
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||    
T  33067465 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttccggata 33067518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36586533 - 36586480
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  36586533 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggata 36586480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37295177 - 37295128
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  37295177 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 37295128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4312184 - 4312132
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  4312184 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 4312132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 7772128 - 7772180
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  7772128 catccggcctaacaatttcggca--ttttaccagttgagctaggacttctggata 7772180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19649575 - 19649627
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  19649575 gcatccggcctaacaatttcggca--ttttgccagttgagctatgacttctggat 19649627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24655025 - 24654973
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||    
T  24655025 gcatccggcctaacaattttggcatttt--gccagttgagctaggacttctggat 24654973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27928209 - 27928157
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||| |||||||||||||||||||  ||||| |||||||||||||||||||    
T  27928209 gcatccggtctaacaatttcggcatttt--gccagttgagctaggacttctggat 27928157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34711632 - 34711684
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  34711632 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 34711684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 38953558 - 38953610
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  38953558 catccggcctaacaatttcggca--ttttgccagttgagctaagacttctggata 38953610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43820919 - 43820867
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  43820919 gcatccggcctaacaatttcggca--ttttgccagttgagttaggacttctggat 43820867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 8547208 - 8547259
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  8547208 catccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 8547259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24242662 - 24242715
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||| |||||||| | |||| ||||||||||||||    
T  24242662 gcatccggcctaacaatttcggca-tttttgccggttgagttaggacttctggat 24242715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 26738021 - 26737970
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||||||    
T  26738021 catccggcctaacaatttcggca--ttttaccagttgagctaggacttctggat 26737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27849819 - 27849872
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||    
T  27849819 gcatccggcctaacaatttcggca-tttttgtcagttgagttaggacttctggat 27849872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37708524 - 37708579
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||||||||| ||||||||    
T  37708524 gcatccgtcctaacaatttcggca--ttttgccagttgagctaggacttatggatact 37708579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 44814913 - 44814866
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  44814913 catccggcctaacaatttcggca--ttttgccagttgagctaggacttct 44814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2442813 - 2442759
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||||||| |||||||    
T  2442813 gcatccggcctaacaatttcgaca--ttttgccagttgagctaggacttatggatac 2442759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6845060 - 6845110
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctgg 53  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||||||    
T  6845060 gcatccggcctaacaatttcggca--ttttgccaattgagctaggacttctgg 6845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26226789 - 26226841
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| |||||||   ||||||||||| |||||||||||||    
T  26226789 gcatccggcctaacaatttcagcatttt---ccagctgagcttggacttctggata 26226841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25213680 - 25213631
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||| |||||||||||||||  ||||||||| ||||||||||||||||    
T  25213680 gcatccggtctaacaatttcggca--ttttgccagttgagctaggacttctg 25213631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25893902 - 25893853
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||||| |||  ||||||||| ||||||||||||||||    
T  25893902 gcatccggcctaacaatttcagca--ttttgccagttgagctaggacttctg 25893853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31639179 - 31639232
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||||| || |||| |||||||||||||||    
T  31639179 gcatccggcctaacaatttcggca--ttttgctagttgagttaggacttctggata 31639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34540141 - 34540190
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  34540141 gcatccggcctaacaatttcggca--ttttgccagttgaactaggacttctg 34540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10096663 - 10096615
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||||||||||    
T  10096663 gcatccggcctaacaatttcgaca--ttttgccagttgagctaggacttct 10096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 18040186 - 18040134
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| ||||||| |  ||| ||||||||||||||||||||    
T  18040186 catccggcctaacaatttcagcattttat--cagttgagctaggacttctggata 18040134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41562493 - 41562441
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||  |||| |||| |||||||||||||||||||    
T  41562493 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctggat 41562441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9569775 - 9569728
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttc 50  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  9569775 gcatccggcctaacaatttcggca--ttttgccagttgagctaagacttc 9569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 9998722 - 9998773
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||  ||||||||| ||| ||||||||||| ||||    
T  9998722 atccggcctaacaatttcggca--ttttgccagttgaactaggacttctagata 9998773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 26675606 - 26675559
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||||||||    
T  26675606 atccggcctaacaatttcggca--ttttaccagttgagctaggacttctg 26675559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 1522741 - 1522697
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||    
T  1522741 tccggcctaacaatttcggta-tttttgccagttgagctaggactt 1522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16816877 - 16816821
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    |||| |||||||||||||||| || |||||||||| |||||||||| ||||| |||||    
T  16816877 gcattcggcctaacaatttcgaca-tttttgccagttgagctaggagttctgaatact 16816821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37953834 - 37953788
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||||||    
T  37953834 gcatccggcctaacaatttcgacattttt--ccagttgagctaggactt 37953788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34143431 - 34143484
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||||| |  |||| |||||||||||||||    
T  34143431 gcatccggcctaacaatttcggca--ttttgctaattgagttaggacttctggata 34143484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34744343 - 34744396
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||| ||||||||||  ||||| ||||||| ||||||||||||    
T  34744343 gcatccgccctaacaatatcggcatttt--gccagttgagctatgacttctggata 34744396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35810288 - 35810235
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| |||||||  |||| ||||||    
T  35810288 gcatccggcctaacaatttcggca--ttttgccagttgagctataacttgtggata 35810235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37817427 - 37817374
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||||| ||||||  ||||| ||||||||||||| ||||||    
T  37817427 gcatccgacctaacaatttcgtcatttt--gccagttgagctaggacttatggata 37817374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39666972 - 39667021
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||| ||| |||| |||||||||||    
T  39666972 gcatccggcctaacaatttcggca--ttttgtcagttgagttaggacttctg 39667021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 40216830 - 40216783
Alignment:
Q  2 catccggcctaacaattt-cggcattttttgccagctgagctaggactt 49  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  40216830 catccggcctaacaattttcggcattttt-gccagttgagctaggactt 40216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 270398 - 270451
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  270398 gcatccggcctaacaatttcggca-tttttgccagttgagctaggacttctggat 270451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28999425 - 28999371
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  28999425 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggatac 28999371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29005141 - 29005087
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  29005141 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggatac 29005087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10635540 - 10635487
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  10635540 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 10635487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19338255 - 19338308
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  19338255 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 19338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40958651 - 40958704
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  40958651 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 40958704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42631062 - 42631115
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  42631062 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 42631115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48392007 - 48391954
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  48392007 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 48391954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43676101 - 43676153
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  43676101 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 43676153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 40809291 - 40809342
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  40809291 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 40809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 48314217 - 48314166
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  48314217 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 48314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17068203 - 17068150
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  17068203 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggata 17068150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24119706 - 24119658
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  24119706 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 24119658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43086548 - 43086600
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  43086548 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttatggat 43086600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 49948292 - 49948240
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  49948292 gcatccggcctaacaatttcgacatttt--gccagttgagctaggacttctggat 49948240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 5598351 - 5598300
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| |||||||||||||||||||||  |||| |||||||||||||||||||    
T  5598351 catccgacctaacaatttcggcattttt--ccagttgagctaggacttctggat 5598300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39606456 - 39606407
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  39606456 gcatccggcctaacaatatcggcat-ttttgccagttgagctaggacttct 39606407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 49500911 - 49500860
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  49500911 catccggcctaacaatttcggca--ttttgccagttgagctaggacttgtggat 49500860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4126626 - 4126572
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||||||||||||||||| |||  ||||| ||| |||||||||||||||||||||    
T  4126626 gcatccggcctaacaatttccgca--ttttgtcagttgagctaggacttctggatac 4126572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18475160 - 18475106
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||| |||| |||||  ||||| |||||||||||||||||||||    
T  18475160 gcatccggcctaacaatgtcggtatttt--gccagttgagctaggacttctggatac 18475106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 26261372 - 26261422
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||| |||||    
T  26261372 atccggcctaacaatttcggcattttt--ccagttgagctaggacttgtggat 26261422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 50248079 - 50248025
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatact 58  Q
    |||||||||||||||||||| |||||| |  ||| ||||||||||||||||||||||    
T  50248079 catccggcctaacaatttcgacattttat--cagttgagctaggacttctggatact 50248025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3315845 - 3315796
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||| ||||||  ||||||||| ||||||||||||||||    
T  3315845 gcatccggcctaacaatgtcggca--ttttgccagttgagctaggacttctg 3315796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10430416 - 10430463
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||    
T  10430416 gcatccggcctaacaatttcggca-tttttgtcagttgagctaggactt 10430463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15906244 - 15906297
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||||||||||||||  |||||| || ||||||||||||||||||||    
T  15906244 gcatctggcctaacaatttcggca--ttttgctagttgagctaggacttctggata 15906297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30455255 - 30455202
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| |||||| |  ||| ||||||||||||||||||||    
T  30455255 gcatccggcctaacaatttcgacattttat--cagttgagctaggacttctggata 30455202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32880656 - 32880709
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||| ||||    
T  32880656 gcatccggcctaacaatttcggca--ttttgccagttgagttaggacttctagata 32880709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34010145 - 34010092
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||| ||||||||||||    
T  34010145 gcatccggcctaacaatttcgaca--ttttgccagttgagctaagacttctggata 34010092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 40685579 - 40685526
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||| ||||||||||||| ||||||  ||||| |||||||||||||||||||||    
T  40685579 catccgacctaacaatttcgacatttt--gccagttgagctaggacttctggatac 40685526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 7204590 - 7204632
Alignment:
Q  6 cggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  7204590 cggcctaacaatttcggca-tttttgccagttgagctaggactt 7204632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25821027 - 25821079
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| |||||| |  ||| |||||||||||||||||||    
T  25821027 gcatccggcctaacaatttcgacattttat--cagttgagctaggacttctggat 25821079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35010666 - 35010718
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| |||||||||||||||||  |||||| || |||||||||||||||||||    
T  35010666 gcatccagcctaacaatttcggca--ttttgctagttgagctaggacttctggat 35010718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 41445108 - 41445156
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||||||||    
T  41445108 catccggcctaacaatgtcggca--ttttgccagttgagctaggacttctg 41445156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 5790108 - 5790061
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||||||||||||||  ||||||||| | |||||||||||||    
T  5790108 catccggcctaacaatttcggca--ttttgccagttaagctaggacttct 5790061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 13555802 - 13555849
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||||||||    
T  13555802 catccggcctaataatttcggca--ttttgccagttgagctaggacttct 13555849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 19279931 - 19279982
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  19279931 atccgacctaacaatttcggca--ttttaccagttgagctaggacttctggata 19279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20164150 - 20164193
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctagga 46  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  20164150 gcatccggcctaacaatttcggca--ttttgccagttgagctagga 20164193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11403220 - 11403166
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||| ||||||||||||||||  |||| |||| |||||||||||||||| ||||    
T  11403220 gcatccgacctaacaatttcggca--ttttcccagttgagctaggacttctgaatac 11403166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15331139 - 15331185
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||| |||||||||||||||||||||  |||| |||||||||||||    
T  15331139 gcatccgacctaacaatttcggcattttt--ccagttgagctaggactt 15331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8214671 - 8214622
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  8214671 tccggcctaacaatttcgatattttt--ccagttgagctaggacttctggat 8214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39522835 - 39522884
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||||| |||  ||||||||| |||| |||||||||||    
T  39522835 gcatccggcctaacaatttctgca--ttttgccagttgagttaggacttctg 39522884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43025937 - 43025884
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||  || ||||| ||| ||| ||||||||||||||||    
T  43025937 gcatccggcctaacaatttcg--atattttgtcagttgaactaggacttctggata 43025884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 43907264 - 43907292
Alignment:
Q  2 catccggcctaacaatttcggcatttttt 30  Q
    |||||||||||||||||||||||||||||    
T  43907264 catccggcctaacaatttcggcatttttt 43907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49535936 - 49535882
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  49535936 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggatac 49535882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 9569525 - 9569473
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  9569525 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 9569473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12821216 - 12821164
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  12821216 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 12821164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13632141 - 13632087
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  13632141 gcatccggcctaacaatttcgacattttt-gccagttgagctaggacttctggata 13632087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30044661 - 30044713
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  30044661 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 30044713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42856614 - 42856562
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  42856614 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 42856562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 46488195 - 46488247
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  46488195 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 46488247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49882786 - 49882838
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  49882786 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 49882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 5397018 - 5397069
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  5397018 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 5397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42154216 - 42154267
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  42154216 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 42154267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 23974721 - 23974771
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  23974721 atccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 23974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3848895 - 3848948
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||    
T  3848895 gcatccggcctagcaatttcggcatttt--gccagttgagctaggacttctggata 3848948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7512818 - 7512765
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  7512818 gcatccggcctaacaattttggcatttt--gccagttgagctaggacttctggata 7512765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 29428105 - 29428052
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||    
T  29428105 catccggcctaacaatttcggtatttt--gccagttgagctaggacttctggatac 29428052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35828325 - 35828276
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  35828325 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctg 35828276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47462113 - 47462166
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  47462113 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctagata 47462166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1033526 - 1033574
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  1033526 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttct 1033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 1982607 - 1982559
Alignment:
Q  6 cggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  1982607 cggcctaacaatttcggcatttt--gccagttgagctaggacttctggata 1982559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3084319 - 3084371
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  3084319 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 3084371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36526218 - 36526270
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||| || |||||||||||||||||||    
T  36526218 gcatccggcctaacaatttcggc--tttttgctagttgagctaggacttctggat 36526270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 54907969 - 54908017
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  54907969 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttct 54908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24550863 - 24550812
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  24550863 catccggcctaacaatttcggca--ttttgccagttgagctaagacttctggat 24550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24712138 - 24712087
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  24712138 catccgacctaacaatttcggcatttt--gccagttgagctaggacttctggat 24712087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24870645 - 24870601
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  24870645 tccggcctaacaatttcggcat-ttttgccagttgagctaggactt 24870601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 35318589 - 35318539
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  35318589 atccggcctaacaatttcggca--ttttgccagttgagttaggacttctggat 35318539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 37166188 - 37166142
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttc 50  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  37166188 catccggcctaacaatttcggca--ttttgccagttgagctaggacttc 37166142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37050752 - 37050703
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| ||||||||    
T  37050752 gcatccggcctaacaatttcggca--ttttgccagttgagctaagacttctg 37050703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50779868 - 50779921
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||||||    
T  50779868 gcatccggcctaacaatttcggca--ttttgccagttgaactaagacttctggata 50779921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4379358 - 4379306
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||| ||| ||| |||||||||||||||    
T  4379358 gcatccggcctaacaatttcggca--ttttgtcagttgaactaggacttctggat 4379306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14285146 - 14285094
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||| ||||  ||||| ||| |||||||||||||||||||    
T  14285146 gcatccggcctaacaattttggca--ttttgtcagttgagctaggacttctggat 14285094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 13389070 - 13389019
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| |||||||||||| |||||||  ||||| |||||||||||||||||||    
T  13389070 catccgacctaacaatttcagcatttt--gccagttgagctaggacttctggat 13389019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 18813420 - 18813373
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||||||||    
T  18813420 catccggcctaacaatttcggca--ttttgccagttgagttaggacttct 18813373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 29648814 - 29648763
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||| |||||||  |||||| || |||||||||||||||||||    
T  29648814 catccggcctaacaaattcggca--ttttgctagttgagctaggacttctggat 29648763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 34684252 - 34684202
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  34684252 catccggcctaacaatttcggca--ttttgccagttgagcta-gacttctggat 34684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35273383 - 35273436
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||| |||||||||||||||| ||||||| ||||| ||||||||||||| |||||    
T  35273383 gcatacggcctaacaatttcgacattttt-gccagttgagctaggacttgtggat 35273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 38882762 - 38882724
Alignment:
Q  8 gcctaacaatttcggcattttttgccagctgagctagga 46  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  38882762 gcctaacaatttcgacattttttgccagttgagctagga 38882724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42412065 - 42412116
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctgga 54  Q
    ||||| ||||||||||||||||||  ||||||||| ||||||| ||||||||||    
T  42412065 gcatctggcctaacaatttcggca--ttttgccagttgagctatgacttctgga 42412116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 55853399 - 55853444
Alignment:
Q  9 cctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  55853399 cctaacaattttggcattttt-gccagttgagctaggacttctggat 55853444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 28010130 - 28010180
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||| |||||||||||| ||||||||  ||||| |||||||||||||||||||    
T  28010130 atcctgcctaacaattttggcatttt--gccagttgagctaggacttctggat 28010180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28033243 - 28033197
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    ||||||||||||||||||||||||  |||| |||| |||||||||||||    
T  28033243 gcatccggcctaacaatttcggca--ttttaccagttgagctaggactt 28033197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 1083551 - 1083506
Alignment:
Q  9 cctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  1083551 cctaacaatttcggcatttt--gccagttgaactaggacttctggata 1083506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12694574 - 12694521
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||| |||| ||||||| |  ||| ||||||||||||||||||||    
T  12694574 gcatccggcctaacagtttcagcattttgt--cagttgagctaggacttctggata 12694521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 26441014 - 26440965
Alignment:
Q  5 ccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||  ||||||||| |||||||||| || ||||||    
T  26441014 ccggcctaacaatttcggca--ttttgccagttgagctaggatttttggata 26440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49319782 - 49319729
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  |||||  || ||||||||||||||||||||    
T  49319782 gcatccggcctaacaatttcgaca--ttttgttagttgagctaggacttctggata 49319729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 52556460 - 52556509
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||| |||||    
T  52556460 gcatccggcctaacaattttggca--ttttgccagttgagctaggatttctg 52556509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1318 - 1371
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  1318 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38490477 - 38490530
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  38490477 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggata 38490530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20251562 - 20251614
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  20251562 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 20251614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32023303 - 32023251
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  32023303 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 32023251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36754818 - 36754870
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  36754818 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 36754870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 15897264 - 15897213
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  15897264 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 15897213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 23080176 - 23080227
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  23080176 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 23080227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 34667094 - 34667043
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  34667094 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 34667043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42160335 - 42160386
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  42160335 catccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 42160386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 2287388 - 2287438
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  2287388 atccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 2287438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7975091 - 7975145
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||    
T  7975091 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttgtggatac 7975145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 13268053 - 13268106
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  13268053 catccgacctaacaatttcggcatttt--gccagttgagctaggacttctggatac 13268106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33607094 - 33607041
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  33607094 gcatctggcctaacaatttcggcatttt--gccagttgagctaggacttctggata 33607041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35476567 - 35476620
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  35476567 gcatccggcctaacaatttcgacatttt--gccagttgagctaggacttctggata 35476620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40592364 - 40592311
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  40592364 gcatccgacctaacaatttcggcatttt--gccagttgagctaggacttctggata 40592311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11543876 - 11543926
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  11543876 gcatccgacctaacaatttcggca-tttttgccagttgagctaggacttctg 11543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12236172 - 12236120
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  |||| |||| |||||||||||||||||||    
T  12236172 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggat 12236120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35687863 - 35687915
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||||||| |  ||| |||||||||||||||||||    
T  35687863 gcatccggcctaacaatttcggcattttat--cagttgagctaggacttctggat 35687915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 42200940 - 42200992
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  42200940 catccggcctaacaattttggcatttt--gccagttgagctaggacttctggata 42200992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 6731592 - 6731541
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  6731592 catccggcctaacaatttcggca--ttttgctagttgagctaggacttctggat 6731541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39070070 - 39070019
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctgga 54  Q
    ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||    
T  39070070 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctgga 39070019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44948070 - 44948016
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||| ||  ||||| ||| |||||||||||||||||||||    
T  44948070 gcatccggcctaacaatttcgaca--ttttgtcagttgagctaggacttctggatac 44948016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 727366 - 727419
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  727366 gcatccgacctaacaatttcggca--ttttgtcagttgagctaggacttctggata 727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18999380 - 18999327
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  18999380 gcatccgacctaacaatttcggca--ttttgccagttgagttaggacttctggata 18999327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34481748 - 34481797
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||||||||||    
T  34481748 gcatccagcctaacaatttcggca--ttttgccagttgagctaggacttctg 34481797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 39310416 - 39310359
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatactata 61  Q
    ||||||||||||||||||||  || |||||| || |||||||||||||||| ||||||||    
T  39310416 catccggcctaacaatttcg--atattttgctagttgagctaggacttctgaatactata 39310359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42007292 - 42007345
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||||||    
T  42007292 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctggata 42007345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 43035490 - 43035437
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggatac 57  Q
    ||||||||||||||||||||| |||||  ||||  |||||||||||||||||||||    
T  43035490 catccggcctaacaatttcggtatttt--gccaattgagctaggacttctggatac 43035437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7958061 - 7958113
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||| ||||||||||| |||||  ||||| |||||||||||||||||||    
T  7958061 gcatccggcccaacaatttcggtatttt--gccagttgagctaggacttctggat 7958113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10392696 - 10392644
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||| ||||||  |||| |||| |||||||||||||||||||    
T  10392696 gcatccggcctaacaatgtcggca--ttttaccagttgagctaggacttctggat 10392644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 16368766 - 16368814
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    |||||||||||||||||||||  | ||||||||| ||||||||||||||||    
T  16368766 catccggcctaacaatttcgg--tattttgccagatgagctaggacttctg 16368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19134593 - 19134647
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  19134593 gcatctggcctaacaatttcgacatttttt-ccagttgagctaggacttatggata 19134647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 23497590 - 23497642
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||||||  |||| |||| ||| ||||||||||||||||    
T  23497590 catccggcctaacaatttcggca--ttttaccagttgaactaggacttctggata 23497642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 23957102 - 23957050
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| ||  ||||||||| |||||||| |||||||||||    
T  23957102 catccggcctaacaatttcgaca--ttttgccagttgagctagaacttctggata 23957050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 45049435 - 45049383
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| ||  ||||||||| ||||||| ||||||||||||    
T  45049435 catccggcctaacaatttcgaca--ttttgccagttgagctaagacttctggata 45049383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 4014892 - 4014943
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||| ||||||    
T  4014892 atccggcctaacaatttcggca--ttttgtcagttgagctaggacttgtggata 4014943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7607317 - 7607370
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||| || |||||| ||  |||||||||||||||||||    
T  7607317 gcatccggcctaacaatttcgaca-tttttgtcaattgagctaggacttctggat 7607370  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 18368843 - 18368792
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||    
T  18368843 atccgacctaacaatttcggcatttt--gccagttgagctaggacttctagata 18368792  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 35706902 - 35706851
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||| ||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  35706902 catccgacctaacaatttcgacatttt--gccagttgagctaggacttctggat 35706851  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 41164727 - 41164778
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||| || |||  ||||| ||||||||||||||||||||    
T  41164727 atccggcctaacaatttcgacacttt--gccagttgagctaggacttctggata 41164778  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 31516285 - 31516335
Alignment:
Q  4 tccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||||  |||| |||| |||||||| ||||||    
T  31516285 tccggcctaacaatttcggcattttt--ccagttgagttaggacttgtggata 31516335  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 34242530 - 34242576
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||||||||||||||||| |  ||| |||||||||||||||    
T  34242530 atccggcctaacaatttcggcattttat--cagttgagctaggacttct 34242576  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 3680902 - 3680862
Alignment:
Q  9 cctaacaatttcggcattttttgccagctgagctaggactt 49  Q
    |||||||||||| |||||||||||| | |||||||||||||    
T  3680902 cctaacaatttctgcattttttgccggttgagctaggactt 3680862  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11816853 - 11816906
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||| ||  |||| |||  ||||||||||||||||||||    
T  11816853 gcatccggcctaacaatttcgaca--ttttaccaattgagctaggacttctggata 11816906  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28855491 - 28855544
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||| ||||||||||| ||||||||  ||||| |||||||||||||| |||||    
T  28855491 gcatccgccctaacaattttggcatttt--gccagttgagctaggacttccggata 28855544  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31054099 - 31054046
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||| ||| ||||||  ||||| ||||||||||| ||||||||    
T  31054099 gcatccggcctaacaatatcgacatttt--gccagttgagctaggacctctggata 31054046  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43461411 - 43461460
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctg 52  Q
    ||||||||||||||||||||| ||  |||| |||| ||||||||||||||||    
T  43461411 gcatccggcctaacaatttcgaca--ttttaccagttgagctaggacttctg 43461460  T

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Target: scaffold0432 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9418 - 9366
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  9418 gcatccggcctaacaatttcggca--ttttgccagttgagctaggacttctggat 9366  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 160499 - 160445
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  160499 gcatccggcctaacaatttcggcat-ttttaccagttgagctaggacttctggata 160445  T

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Target: scaffold0179 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4092 - 4145
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    ||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||    
T  4092 gcatccggcttaacaatttcggcatttt--gccagttgagctaggacttctggata 4145  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 90619 - 90567
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||| ||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  90619 catcaggcctaacaatttcggcatttt--gccagttgagctaggacttctggata 90567  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39390 - 39442
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  |||| |||| |||||||||||||||||||    
T  39390 gcatccggcctaacaatttcggca--ttttaccagttgagctaggacttctggat 39442  T

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Target: scaffold0457 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 6829 - 6782
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  6829 catccggcctaacaatttcggca--ttttgccagttgagctaggacttct 6782  T

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Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 8937 - 8988
Alignment:
Q  2 catccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    |||||||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  8937 catccggcctaacaatttcggca--ttttgccagttgagctatgacttctggat 8988  T

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Target: scaffold0778 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 869 - 821
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttct 51  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||||||||||    
T  869 gcatccggcctaacaatttcgaca--ttttgccagttgagctaggacttct 821  T

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Target: scaffold0595 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 396 - 344
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||||||||  | ||||||| ||||||||||||| |||||    
T  396 gcatccggcctaacaatttcggca--tattgccagttgagctaggacttttggat 344  T

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Target: scaffold0882 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3774 - 3821
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttc 50  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  3774 gcatccggcctaacaatttcggca--ttttgccagttgagctaagacttc 3821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26994 - 27047
Alignment:
Q  1 gcatccggcctaacaatttcggcattttttgccagctgagctaggacttctggata 56  Q
    |||||||||||||||||||| |||  ||||||||| |||||||| |||| ||||||    
T  26994 gcatccggcctaacaatttctgca--ttttgccagttgagctagaacttatggata 27047  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 195790 - 195739
Alignment:
Q  3 atccggcctaacaatttcggcattttttgccagctgagctaggacttctggat 55  Q
    ||||||||||||||||||| || ||||||| || ||| |||||||||||||||    
T  195790 atccggcctaacaatttcgaca-tttttgctagttgaactaggacttctggat 195739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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