View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2724_low_11 (Length: 340)
Name: NF2724_low_11
Description: NF2724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2724_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 99 - 324
Target Start/End: Complemental strand, 3220099 - 3219870
Alignment:
| Q |
99 |
gggatattacatttacaactctcatctctataaactcatctt---ttttaactcatcctccattcaaaa-tctcaagtacatttccttaaatatattgta |
194 |
Q |
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| T |
3220099 |
gggatattacatttacaactctcatctctataaactcatcttcttttttaactcatcctccattcaaaaatctcaagtacatttccttaaatatattgta |
3220000 |
T |
|
| Q |
195 |
gatcattgtatgatattaaagttgaagcaacataccattgaaaacattaattaggataaaatatcaaatctttgatctgactctaataactaaaagaaga |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3219999 |
gatcattgtatgatattaaagttgaagcaacataccattgaaaacattaattaggataaaatatcaaatctttgatctgactctaataactaaaagaaga |
3219900 |
T |
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| Q |
295 |
gttaacgtgagtgatatcagtggcattaat |
324 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
3219899 |
gttaacgtgagtgatatcagtggcattaat |
3219870 |
T |
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