View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2724_low_17 (Length: 278)
Name: NF2724_low_17
Description: NF2724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2724_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 51805427 - 51805675
Alignment:
| Q |
16 |
aaatcaacccctacaagaaaaaatggtgcaagtcatgttcaggccttgtacttggttacaaaacaggatcatatcattcaccaattttaaattttgatag |
115 |
Q |
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| T |
51805427 |
aaatcaacccctacaagaaaaaatggtgcaagtcatgttcaggccttgtacttggttacaaaacaggatcatatcattcaccaattttaaattttgatag |
51805526 |
T |
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| Q |
116 |
tcaaa-taactatctcactgctacaacttgtaaatttaattaattaataatggttagtcaagctaattcagtaataatcatttttaatcgtacttgaaat |
214 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51805527 |
tcaaaataactatctcactgctacaacttgtaaatttaattaattaataatggttagtcaagctaattcagtaataatcatttttaatcgtacttgaaat |
51805626 |
T |
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| Q |
215 |
ttagtcgatttttaataaattctgcataggtttgatcaaaagttatatg |
263 |
Q |
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||||||||||||||||||||||||||||| |||||| |||||||||||| |
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| T |
51805627 |
ttagtcgatttttaataaattctgcatagatttgataaaaagttatatg |
51805675 |
T |
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