View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2724_low_31 (Length: 231)
Name: NF2724_low_31
Description: NF2724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2724_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 49230437 - 49230641
Alignment:
| Q |
12 |
tgagatgaacatcacatcttaacccgaattcttaggacattagatgtataagtcctcttacttaaataatttactcaacactcaaatttctaatcaaaat |
111 |
Q |
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| T |
49230437 |
tgagttgaacatcacatcttaacccgaattcttaggacattagatgtataaatccttttacttaaataatttactcaacactcaaatttctaatcaaaat |
49230536 |
T |
|
| Q |
112 |
gagatttctaactcatattctattgtatcttctacttaagatttcaacacaaaatatccaagataaatagcaacacaggttaattctgttgttgcctatg |
211 |
Q |
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| T |
49230537 |
aagatttctaactcatattctattgtatcttctacttaaaatttcaacacaaaatatccaagataaatagcaacacaagttaattctgttgttgcctacg |
49230636 |
T |
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| Q |
212 |
catca |
216 |
Q |
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||||| |
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| T |
49230637 |
catca |
49230641 |
T |
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