View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2725_high_24 (Length: 252)
Name: NF2725_high_24
Description: NF2725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2725_high_24 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 42754261 - 42754487
Alignment:
| Q |
1 |
agcttgttgatttgtgtttgggaattggattcagcatcatattcatatatcttgtggtgaatatgcacacctttgaactcacaaaaacaactatctggtt |
100 |
Q |
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| T |
42754261 |
agcttgttgatttgtgtttgggaattggattcagcatcatattcatatatcttgtggtgaatatgcacacctttgaactcacaaaaacaactatctggtt |
42754360 |
T |
|
| Q |
101 |
cagctaatagctttggatccactaattcatcctgatctattccagctatctctttccttttcttctttgatcccacatccaataactgctctgaacaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42754361 |
cagctaatagctttggatccactaattcatcctgatctattccagctatctctttccttttcttctttgatcccacatccaataactgctctgaacaaat |
42754460 |
T |
|
| Q |
201 |
gagattcaatccaacatcatgaacaac |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
42754461 |
gagattcaatccaacatcatgaacaac |
42754487 |
T |
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