View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2725_low_38 (Length: 202)
Name: NF2725_low_38
Description: NF2725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2725_low_38 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 29963610 - 29963811
Alignment:
| Q |
1 |
acattgagctttacttcattgatactcaaacgccatagtttcatttcaccttcaaatgttttctcctttaacaaacctctcaaattcatccaaaagaata |
100 |
Q |
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| T |
29963610 |
acattaagctttacttcattgataatcaaacgccaaagtttcatttcaccttcaaatgttttctctttcaacaaacccctcaaattcatccaaaagaata |
29963709 |
T |
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| Q |
101 |
gccctgcattacttggtaagcaagtaatgttgactttctcaagtccctttgtgaaaaactcgcgacgctctcttaatcttcttgaactctcttccaaaaa |
200 |
Q |
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| T |
29963710 |
gtcctgcattacttggtaagcaagtaatgttgactttctcaagtccctttgtaaaaaattcacgtcgctctcgtaatcttcttgaactctcttccaaaaa |
29963809 |
T |
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| Q |
201 |
tt |
202 |
Q |
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|| |
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| T |
29963810 |
tt |
29963811 |
T |
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