View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2726_low_12 (Length: 386)

Name: NF2726_low_12
Description: NF2726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2726_low_12
NF2726_low_12
[»] chr1 (32 HSPs)
chr1 (1-376)||(9385660-9386042)
chr1 (169-294)||(28455875-28456002)
chr1 (169-294)||(32007075-32007202)
chr1 (169-294)||(45813011-45813138)
chr1 (169-292)||(778578-778702)
chr1 (169-294)||(5055788-5055915)
chr1 (169-294)||(29994383-29994510)
chr1 (169-294)||(41808203-41808330)
chr1 (169-294)||(20749-20876)
chr1 (169-294)||(48660023-48660150)
chr1 (169-262)||(7059501-7059595)
chr1 (169-294)||(5943682-5943809)
chr1 (169-294)||(41761411-41761538)
chr1 (1-115)||(9232591-9232705)
chr1 (170-294)||(35945798-35945924)
chr1 (169-239)||(41039303-41039373)
chr1 (169-288)||(39276357-39276478)
chr1 (172-294)||(2088908-2089032)
chr1 (169-294)||(49783708-49783835)
chr1 (173-294)||(50106200-50106323)
chr1 (169-239)||(4066019-4066089)
chr1 (172-222)||(13183179-13183229)
chr1 (204-292)||(29587255-29587345)
chr1 (169-222)||(13109845-13109898)
chr1 (169-249)||(26032848-26032929)
chr1 (169-294)||(192416-192543)
chr1 (169-239)||(35110099-35110169)
chr1 (169-222)||(13097379-13097432)
chr1 (169-294)||(46447373-46447504)
chr1 (173-237)||(39228492-39228554)
chr1 (172-294)||(7275682-7275806)
chr1 (170-222)||(26264537-26264589)
[»] chr7 (34 HSPs)
chr7 (169-294)||(47557782-47557909)
chr7 (169-294)||(25112247-25112374)
chr7 (169-294)||(25546275-25546402)
chr7 (169-294)||(2146637-2146764)
chr7 (169-294)||(4106739-4106866)
chr7 (169-294)||(23358186-23358313)
chr7 (169-294)||(31770532-31770659)
chr7 (169-294)||(40058239-40058366)
chr7 (170-291)||(43753754-43753878)
chr7 (172-294)||(44083941-44084065)
chr7 (169-294)||(27915580-27915708)
chr7 (169-282)||(4107322-4107437)
chr7 (169-262)||(48146787-48146881)
chr7 (179-289)||(27229487-27229600)
chr7 (169-296)||(47250251-47250380)
chr7 (169-294)||(32606330-32606457)
chr7 (193-294)||(47960979-47961082)
chr7 (169-239)||(38781208-38781278)
chr7 (169-239)||(47570718-47570788)
chr7 (169-292)||(8439081-8439206)
chr7 (169-234)||(11355886-11355951)
chr7 (169-288)||(29484755-29484876)
chr7 (169-294)||(7162790-7162915)
chr7 (169-294)||(25872764-25872891)
chr7 (173-294)||(38033730-38033853)
chr7 (169-239)||(42081619-42081686)
chr7 (182-294)||(25049971-25050085)
chr7 (169-249)||(48444152-48444233)
chr7 (178-226)||(34763513-34763561)
chr7 (169-294)||(5772819-5772946)
chr7 (184-292)||(13887174-13887282)
chr7 (169-279)||(41183831-41183943)
chr7 (169-239)||(5587338-5587408)
chr7 (169-239)||(5592299-5592369)
[»] scaffold0032 (1 HSPs)
scaffold0032 (169-294)||(56482-56609)
[»] chr2 (28 HSPs)
chr2 (169-291)||(11816550-11816675)
chr2 (169-294)||(10639606-10639733)
chr2 (169-294)||(11459716-11459843)
chr2 (169-294)||(33083554-33083681)
chr2 (169-294)||(23839860-23839987)
chr2 (169-294)||(26605625-26605752)
chr2 (169-294)||(39535534-39535661)
chr2 (172-294)||(11708679-11708803)
chr2 (169-294)||(19537308-19537435)
chr2 (169-277)||(37197610-37197720)
chr2 (169-294)||(19048755-19048882)
chr2 (169-248)||(33001751-33001830)
chr2 (169-294)||(34460370-34460497)
chr2 (169-294)||(45125165-45125292)
chr2 (169-294)||(27137918-27138044)
chr2 (169-294)||(39831444-39831570)
chr2 (172-292)||(16654366-16654488)
chr2 (169-249)||(4851367-4851448)
chr2 (169-294)||(7275886-7276014)
chr2 (169-295)||(34239820-34239948)
chr2 (169-239)||(29659218-29659288)
chr2 (169-222)||(42578243-42578296)
chr2 (169-294)||(19816221-19816348)
chr2 (171-292)||(20497592-20497715)
chr2 (172-249)||(4800923-4801001)
chr2 (169-226)||(44181887-44181944)
chr2 (169-294)||(34234531-34234656)
chr2 (200-294)||(45201903-45201999)
[»] scaffold1348 (1 HSPs)
scaffold1348 (169-294)||(862-989)
[»] chr8 (33 HSPs)
chr8 (169-294)||(70523-70650)
chr8 (169-294)||(6602518-6602645)
chr8 (169-294)||(6677971-6678098)
chr8 (169-294)||(32333115-32333242)
chr8 (169-294)||(45264640-45264766)
chr8 (169-294)||(1078648-1078775)
chr8 (169-294)||(28817257-28817384)
chr8 (169-294)||(31969720-31969847)
chr8 (169-294)||(35779497-35779624)
chr8 (169-294)||(42192639-42192766)
chr8 (169-294)||(10963242-10963367)
chr8 (169-294)||(1340-1467)
chr8 (169-294)||(4530982-4531109)
chr8 (169-294)||(7792662-7792789)
chr8 (170-294)||(40911222-40911347)
chr8 (169-277)||(42885192-42885302)
chr8 (172-294)||(7813323-7813447)
chr8 (169-294)||(3822397-3822524)
chr8 (179-249)||(5385385-5385456)
chr8 (169-291)||(39303313-39303438)
chr8 (169-294)||(12534720-12534845)
chr8 (170-290)||(41849233-41849354)
chr8 (172-225)||(31532128-31532181)
chr8 (170-256)||(18752381-18752468)
chr8 (169-294)||(39435283-39435410)
chr8 (169-238)||(13891149-13891218)
chr8 (169-257)||(2907054-2907142)
chr8 (170-256)||(7403696-7403782)
chr8 (169-219)||(42364702-42364752)
chr8 (199-294)||(18386709-18386806)
chr8 (169-226)||(29425422-29425479)
chr8 (169-234)||(31695269-31695334)
chr8 (169-237)||(9775042-9775110)
[»] chr6 (17 HSPs)
chr6 (169-294)||(33621495-33621622)
chr6 (169-294)||(33704217-33704344)
chr6 (169-294)||(21000693-21000820)
chr6 (169-294)||(28322933-28323060)
chr6 (169-270)||(4464152-4464255)
chr6 (169-294)||(21037292-21037418)
chr6 (169-238)||(361070-361139)
chr6 (169-262)||(19145505-19145598)
chr6 (169-234)||(29009650-29009715)
chr6 (169-226)||(35218640-35218697)
chr6 (169-294)||(2959150-2959277)
chr6 (199-256)||(11572048-11572106)
chr6 (179-220)||(10999418-10999459)
chr6 (169-262)||(16518457-16518549)
chr6 (169-223)||(28592128-28592182)
chr6 (169-234)||(32289408-32289473)
chr6 (169-248)||(24619079-24619159)
[»] chr5 (19 HSPs)
chr5 (169-294)||(13203958-13204085)
chr5 (179-294)||(27721432-27721549)
chr5 (169-294)||(35317697-35317824)
chr5 (169-294)||(21018224-21018351)
chr5 (169-294)||(29265876-29266003)
chr5 (169-262)||(31909385-31909479)
chr5 (169-296)||(4824939-4825068)
chr5 (172-294)||(1191543-1191667)
chr5 (169-294)||(2970985-2971112)
chr5 (169-294)||(12257357-12257484)
chr5 (193-294)||(9576985-9577088)
chr5 (172-292)||(6020995-6021117)
chr5 (169-291)||(8734000-8734125)
chr5 (169-234)||(35545996-35546061)
chr5 (169-226)||(32143414-32143471)
chr5 (169-294)||(11124653-11124780)
chr5 (172-294)||(40177625-40177749)
chr5 (169-294)||(2786272-2786398)
chr5 (172-238)||(17984745-17984811)
[»] chr4 (39 HSPs)
chr4 (169-294)||(1173952-1174079)
chr4 (169-294)||(34739281-34739408)
chr4 (169-294)||(53457825-53457952)
chr4 (169-300)||(55400223-55400356)
chr4 (169-294)||(19849503-19849630)
chr4 (169-294)||(26424858-26424984)
chr4 (169-294)||(28798388-28798515)
chr4 (169-294)||(43139906-43140033)
chr4 (170-299)||(55214648-55214779)
chr4 (169-294)||(18257330-18257457)
chr4 (169-294)||(45874056-45874183)
chr4 (179-274)||(39807865-39807962)
chr4 (169-294)||(54768432-54768559)
chr4 (169-256)||(12735471-12735559)
chr4 (169-294)||(238458-238585)
chr4 (169-294)||(12867842-12867969)
chr4 (169-237)||(2075565-2075633)
chr4 (169-287)||(23417483-23417603)
chr4 (169-236)||(1966611-1966678)
chr4 (173-294)||(23710337-23710460)
chr4 (169-294)||(11277983-11278106)
chr4 (169-293)||(19225261-19225387)
chr4 (169-262)||(22608019-22608113)
chr4 (169-262)||(29581044-29581137)
chr4 (179-294)||(37134049-37134166)
chr4 (169-294)||(19673929-19674056)
chr4 (179-226)||(23532118-23532165)
chr4 (210-294)||(32441125-32441211)
chr4 (169-239)||(50033440-50033510)
chr4 (169-222)||(31015057-31015110)
chr4 (169-256)||(51287641-51287730)
chr4 (169-222)||(52171990-52172043)
chr4 (169-237)||(33770628-33770696)
chr4 (193-294)||(12767088-12767191)
chr4 (182-262)||(32778159-32778238)
chr4 (169-222)||(16555382-16555435)
chr4 (173-249)||(19814152-19814229)
chr4 (172-294)||(2864751-2864875)
chr4 (169-237)||(37620677-37620745)
[»] chr3 (29 HSPs)
chr3 (169-294)||(7824454-7824581)
chr3 (169-294)||(29689482-29689609)
chr3 (169-294)||(54158267-54158394)
chr3 (172-277)||(9349679-9349786)
chr3 (169-294)||(42392805-42392932)
chr3 (169-294)||(43247650-43247777)
chr3 (169-294)||(51665925-51666052)
chr3 (169-294)||(54151681-54151808)
chr3 (179-294)||(55018044-55018161)
chr3 (169-294)||(4601426-4601553)
chr3 (169-262)||(475281-475374)
chr3 (169-277)||(36228994-36229104)
chr3 (169-277)||(3112995-3113105)
chr3 (170-262)||(38257304-38257397)
chr3 (170-294)||(40756728-40756855)
chr3 (169-294)||(43775224-43775351)
chr3 (169-294)||(50729525-50729652)
chr3 (169-294)||(50783197-50783324)
chr3 (194-294)||(35461504-35461606)
chr3 (169-294)||(28844505-28844633)
chr3 (169-294)||(32001424-32001551)
chr3 (169-294)||(33334609-33334736)
chr3 (169-294)||(52500839-52500966)
chr3 (169-294)||(28458664-28458790)
chr3 (172-239)||(7958627-7958694)
chr3 (169-294)||(47635005-47635132)
chr3 (169-219)||(27230744-27230794)
chr3 (179-224)||(448885-448930)
chr3 (171-294)||(1778852-1778977)
[»] scaffold0119 (2 HSPs)
scaffold0119 (169-294)||(13951-14078)
scaffold0119 (169-294)||(19631-19758)
[»] scaffold0044 (1 HSPs)
scaffold0044 (169-294)||(9973-10100)
[»] scaffold0038 (1 HSPs)
scaffold0038 (169-294)||(114253-114380)
[»] scaffold0067 (1 HSPs)
scaffold0067 (169-291)||(34822-34947)
[»] scaffold0053 (1 HSPs)
scaffold0053 (169-249)||(22210-22291)
[»] scaffold0352 (1 HSPs)
scaffold0352 (169-238)||(8943-9012)


Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 9386042 - 9385660
Alignment:
Q  1 tagatgtggaaaggagacaagttgtgaggttgttgatgaagatagtggagaagttcaatgtgataagcgactctgtcattatgtataccaaacaaccgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9386042 tagatgtggaaaggagacaagttgtgaggttgttgatgaagatagtggagaagttcaatgtgataagcgattctgtcattatgtataccaaacaaccgaa 9385943  T
Q  101 aagtgtggtacgtataattgcctcagtttacagatgtgatgagtannnnnnnnnnnnnnnnnnnnnnngtcttagataaagtggtaa-------ttcact 193  Q
    || ||||||||||||||||||||||||||||||||||||||||||                       |||||| ||||||||||||       ||||||    
T  9385942 aaatgtggtacgtataattgcctcagtttacagatgtgatgagtatttgtttattttttattttttttgtcttatataaagtggtaattggtaattcact 9385843  T
Q  194 gaaattaaacccacatacaactgtgaggtcccgtgttcgaacccggtcacgacgtctgaccttgtaattcggcatttaccagttaagttaggacttctag 293  Q
     |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||    
T  9385842 aaaattaaaccgacatacaactgtgaggtcccgcgtttgaacccggtcacgacgtccgaccttgtaattcggcatttgccagttaagttaggacttttag 9385743  T
Q  294 attaatattttgttgatatatacnnnnnnnnnnngcggcgcatcctctcggatgaccctccgggatgatcctctgtacctatg 376  Q
    |||||||||||||||||||||||           |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9385742 attaatattttgttgatatatactttttttttttgcggcgcatcctttcggatgaccctccgggatgatcctctgtacctatg 9385660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 28456002 - 28455875
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || ||||||    
T  28456002 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 28455903  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  28455902 atttgccagttgagctaggacttctaga 28455875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 32007202 - 32007075
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  32007202 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 32007103  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  32007102 atttgccagttgagctaggacttctaga 32007075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 45813011 - 45813138
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||||| ||| ||||||| || ||||||    
T  45813011 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatttcggc 45813110  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || |||||||||||||    
T  45813111 atttgtcagttgagctaggacttctaga 45813138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 778702 - 778578
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaattcggca 267  Q
    ||||||||| || |||||||||||||||||||||| |||| |||||||| ||||||   ||||||||| | ||||||||||  |||||||||||||||||    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacctgagtcacgacgttcgaccttgtaattcggca 778603  T
Q  268 tttaccagttaagttaggacttcta 292  Q
    ||| |||||| || ||| |||||||    
T  778602 ttttccagttgagctagaacttcta 778578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 5055788 - 5055915
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  5055788 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 5055887  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||| | || |||||||||||||    
T  5055888 atttgccagctgagctaggacttctaga 5055915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 29994383 - 29994510
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| |||| ||||||||| || |||||||||||| ||| |||||||| ||||| || ||||||    
T  29994383 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttcggc 29994482  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  29994483 atttgccagttgagctaggacttctaga 29994510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 41808330 - 41808203
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||| ||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  41808330 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 41808231  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  41808230 atttgccagttgagctaggacttctaga 41808203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 20876 - 20749
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||| ||| ||||| |||| ||||||||||||||||| ||||||| || ||||||| ||||   ||||| || ||||||    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggc 20777  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| ||||||||||||||||    
T  20776 atttgccagttgagttaggacttctaga 20749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 48660150 - 48660023
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||| ||||| |||||||||| |||||  ||||| | ||||| || ||||||    
T  48660150 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatttcggc 48660051  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  48660050 atttgccagttgagctaggacttctaga 48660023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 7059595 - 7059501
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt 262  Q
    |||||||||||||||||||| |||| ||||||||| |||| |||||||||||||| |   ||||||||| |||||||||||||||||||| ||||    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaatt 7059501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 5943809 - 5943682
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| ||||| |||| || ||||||||||| |||| ||||||||||||||| | |||||||||| |||||||||||| | ||||| || ||||||    
T  5943809 gtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaatttcggc 5943710  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || ||||| |||||||    
T  5943709 atttgtcagttgagctaggaattctaga 5943682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 41761411 - 41761538
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||| ||| |||||||||| |||||||| ||||| |||| ||||||||||||||| | |||||||||| |||||| ||||| | ||||| || ||||||    
T  41761411 gtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 41761510  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| |  |||||||||||||    
T  41761511 atttgccagttgaactaggacttctaga 41761538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9232591 - 9232705
Alignment:
Q  1 tagatgtggaaaggagacaagttgtgaggttgttgatgaagatagtggagaagttcaatgtgataagcgactctgtcattatgtataccaaacaaccgaa 100  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||||||| ||||||   | ||||||||||  ||||||||||| ||     
T  9232591 tagatgtggaaagggaacaagttgtaaggttgttgatgaagaaaaaggagaagttcaatgtaataagcagttatgtcattatgcttaccaaacaactgat 9232690  T
Q  101 aagtgtggtacgtat 115  Q
    ||||| |||| ||||    
T  9232691 aagtgcggtatgtat 9232705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 35945924 - 35945798
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggca 267  Q
    |||||||| |||||||||| |||||||| ||||  |||| ||||||||||||| ||| |||||||||| |||||| |||||   ||||  || |||||||    
T  35945924 tcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttacaatttcggca 35945825  T
Q  268 tttaccagttaagttaggacttctaga 294  Q
    |||||||||| || |||||||||||||    
T  35945824 tttaccagttgagctaggacttctaga 35945798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 41039303 - 41039373
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  41039303 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgg 41039373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 39276478 - 39276357
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || |||||||||| |||||||| ||||| |||| | ||||||||||||||| |||||||||| |||||| ||||| | ||||| || ||||||    
T  39276478 gtcttaaatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 39276379  T
Q  267 atttaccagttaagttaggact 288  Q
    |||| |||||| || |||||||    
T  39276378 atttgccagttgagctaggact 39276357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 2088908 - 2089032
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||||||||| |||||||||| ||| ||||||||| |||||||| | | ||||||||||| ||||||| ||||||||||  || ||||  |||    
T  2088908 ttagatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaacccgagtcacgatgtctgaccttacaatttcgatatt 2089007  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | |||||| || |||||||||||||    
T  2089008 tgccagttgagctaggacttctaga 2089032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 49783835 - 49783708
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||  |||||||||||||||||| ||| |||||||||||  ||| |||||  ||||||| || |||| |    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcgac 49783736  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| ||| || ||||||||||| ||||    
T  49783735 atttgccaattgagttaggacttataga 49783708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 50106200 - 50106323
Alignment:
Q  173 tagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaat-tcggcattt 270  Q
    ||||| || ||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||| |||| ||||  | ||||| ||| ||  |||||    
T  50106200 tagatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgttcggccttgcaatctcaacattt 50106299  T
Q  271 accagttaagttaggacttctaga 294  Q
    ||||||||| ||||||||||||||    
T  50106300 accagttaaattaggacttctaga 50106323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 4066089 - 4066019
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||| |   |||||||||||    
T  4066089 gtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccgg 4066019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 13183179 - 13183229
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  13183179 ttagatgaagtggtaattcactgaaattaaactcacatacaactgtaaggt 13183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 29587345 - 29587255
Alignment:
Q  204 ccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttcta 292  Q
    ||||| |||| |||||||||||| |||||||||| |||||||||||| | ||||| || |||||||||| |||||| || |||||||||||    
T  29587345 ccacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttgccagttgagctaggacttcta 29587255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 13109898 - 13109845
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||||||||||||    
T  13109898 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggt 13109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 26032929 - 26032848
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtc 249  Q
    ||||||||| ||| |||||| |||||||||||||| |||| | ||||||||||| ||  |||||||||| ||||||||||||    
T  26032929 gtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtc 26032848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 192543 - 192416
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| | |||||| ||||| |||| ||||||||||||||| | |||||||| ||| |||| ||||| | ||||| || ||  ||    
T  192543 gtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgcaattttagc 192444  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || |||||||||||||    
T  192443 atttgtcagttgagctaggacttctaga 192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 35110099 - 35110169
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| | || ||||||||| |||| |||||||| |||||| | ||||||||||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgg 35110169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 13097432 - 13097379
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    ||||||||| |||||||||| || | ||||||||| ||||||||||||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggt 13097379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 46447373 - 46447504
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaa----ttaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-tt 262  Q
    ||||||||| | |||||||| ||||||||    |||||| |||| | ||||||||||||||| |||||||||| ||| ||||||||   ||||| || ||    
T  46447373 gtcttagatgatgtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagccttgcaattt 46447472  T
Q  263 cggcatttaccagttaagttaggacttctaga 294  Q
    |||||||| |||||| |  ||| |||||||||    
T  46447473 cggcatttgccagttgaactagaacttctaga 46447504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 39228554 - 39228492
Alignment:
Q  173 tagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc 237  Q
    ||||||||||||||||| | | ||||||||| ||||  ||||||||| || ||||||||||||||    
T  39228554 tagataaagtggtaatttattaaaattaaactcaca--caactgtgatgttccgtgttcgaaccc 39228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 7275806 - 7275682
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||||||||  |||||||||||||| || | |||||||||| || ||| ||||||| ||| ||||  ||||| ||||||  || |||| ||||    
T  7275806 ttagatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgaccttacaatttcgacatt 7275707  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | |||||| ||||| || |||||||    
T  7275706 tgccagttgagttaagatttctaga 7275682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 26264537 - 26264589
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    |||||||| ||||| |||| || ||||||||||| |||| |||||||||||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggt 26264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 47557909 - 47557782
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||||||||||||||||| ||| |||||||||| ||||| |||||  |||||||||| ||||||    
T  47557909 gtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgtaatttcggc 47557810  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||||||||| ||||||||||||||||    
T  47557809 atttaccagttgagttaggacttctaga 47557782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 25112247 - 25112374
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||| |||||||||| ||||| |||||| ||||||| || |||||     
T  25112247 gtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatttcggt 25112346  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  25112347 atttgccagttgagctaggacttctaga 25112374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 25546275 - 25546402
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| |||||||||||||||||  ||||||||| ||||| |||||| | ||||| || ||||||    
T  25546275 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatttcggc 25546374  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||||||||| || |||||||||||||    
T  25546375 atttaccagttgagctaggacttctaga 25546402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 2146764 - 2146637
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||  | |||||||||| |||||| ||||| | ||||| || ||||||    
T  2146764 gtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 2146665  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  2146664 attttccagttgagctaggacttctaga 2146637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 4106866 - 4106739
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  4106866 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4106767  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| ||||||  | |||||||||||||    
T  4106766 atttgccagttgggctaggacttctaga 4106739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 23358313 - 23358186
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||| |||||||| | ||||| || |||||     
T  23358313 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggt 23358214  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  23358213 atttgccagttgagctaggacttctaga 23358186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 31770532 - 31770659
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| ||| || | ||||| || ||||||    
T  31770532 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatttcggc 31770631  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  31770632 atttgccagttgagctaggacttctaga 31770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 40058366 - 40058239
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| || | ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || || |||    
T  40058366 gtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 40058267  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| ||||||||||||||||    
T  40058266 atttgccagttgagttaggacttctaga 40058239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 43753754 - 43753878
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacc-cacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||||| |||||||||| ||||||||||||| | |||||||||||||||||| ||| |||||||||| |||||||||||| | ||||| || ||||||    
T  43753754 tcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttcggc 43753853  T
Q  267 atttaccagttaagttaggacttct 291  Q
    |||| |||||| |  ||||||||||    
T  43753854 atttgccagttgaactaggacttct 43753878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 44084065 - 44083941
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || || ||||||    
T  44084065 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatt 44083966  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | |||||| || |||||||||||||    
T  44083965 tgccagttgagctaggacttctaga 44083941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 27915580 - 27915708
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc--ggtcacgacgtctgaccttgtaatt-cgg 265  Q
    ||||||||| ||||||||||||| ||||||||||| || | ||||||||||| ||    |||||||| |  |||||||||||| ||||||| |||| | |    
T  27915580 gtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgaccttgcaatttcag 27915679  T
Q  266 catttaccagttaagttaggacttctaga 294  Q
    |||||||||||| ||||||||||||||||    
T  27915680 catttaccagttgagttaggacttctaga 27915708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 4107437 - 4107322
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||  |||||| | ||||| || ||||||    
T  4107437 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaatttcggc 4107338  T
Q  267 atttaccagttaagtt 282  Q
    |||| |||||| ||||    
T  4107337 atttgccagttgagtt 4107322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 48146881 - 48146787
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt 262  Q
    ||||||||| |||||||||| || ||||| | ||| |||| ||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  48146881 gtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgcaatt 48146787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 27229487 - 27229600
Alignment:
Q  179 aagtggtaattcactgaaattaaacc-cacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccag 275  Q
    |||||||||| ||||||||||||| | |||| ||||||||||||||||| |||||||||| |||||||||||| | ||||| || |||| |||||  |||    
T  27229487 aagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcgacatttgtcag 27229586  T
Q  276 ttaagttaggactt 289  Q
    || |||||||||||    
T  27229587 ttgagttaggactt 27229600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 47250251 - 47250380
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||  ||| ||||  |||||||||| ||||| |||||| | ||||| || ||||||    
T  47250251 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatttcggc 47250350  T
Q  267 atttaccagttaagttaggacttctagatt 296  Q
    |||| |||||| || |||||||||||||||    
T  47250351 atttgccagttgagctaggacttctagatt 47250380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 32606330 - 32606457
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| || |||||||||||||||||||||  |||||| |||||| ||||| || |||||||||  |||||||||||| | ||||| || |||||     
T  32606330 gtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatttcggt 32606429  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| |||||| |||||||||    
T  32606430 atttgtcagttgagttagaacttctaga 32606457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 47960979 - 47961082
Alignment:
Q  193 tgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttc 290  Q
    ||||||||||| |||| ||||||  ||||||||| |||||||||||| ||| ||||||||||||||||| || ||||||| | |||| ||||| ||||||    
T  47960979 tgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattttggcatttgcaagttgagttaagacttc 47961078  T
Q  291 taga 294  Q
    ||||    
T  47961079 taga 47961082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 38781208 - 38781278
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||| ||||    
T  38781208 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgg 38781278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 47570718 - 47570788
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||| ||||| ||||||||||||    
T  47570718 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgg 47570788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 8439206 - 8439081
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||  |||| ||||||||||||||| | ||||||| || |||||| ||||| ||||||| || || |||    
T  8439206 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaattttggc 8439107  T
Q  267 atttaccagttaagttaggacttcta 292  Q
    |||| |||||| |  |||||||||||    
T  8439106 atttgccagttgaactaggacttcta 8439081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 11355951 - 11355886
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa 234  Q
    ||||||||| |||||||||| |||||||||||||| |||| ||||||||||| ||||| |||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaa 11355886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 29484755 - 29484876
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || ||||| |||| |||||||||||||| ||||||||| |||||||||||| |||| ||||| | ||| |||||| | ||||| || ||||||    
T  29484755 gtcttatatgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaatttcggc 29484854  T
Q  267 atttaccagttaagttaggact 288  Q
    |||| |||||| || |||||||    
T  29484855 atttgccagttgagctaggact 29484876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 7162790 - 7162915
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| ||||  ||| |||||||||||| |||||||||| |||||| ||||| | ||||  || ||||||    
T  7162790 gtcttagatgaagtggtaatccactgaaaataaactcaca--caattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatttcggc 7162887  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||| ||||    
T  7162888 atttgccagttgagctaggacttttaga 7162915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 25872891 - 25872764
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaat-tcggc 266  Q
    ||||||||| ||||||||| |||| |||| ||||| || | |||| ||| |||||    ||||||||| || |||||||||| ||||||||||| |||||    
T  25872891 gtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacctggatcacgacgtccgaccttgtaatatcggc 25872792  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| ||| || ||||||||||||||||    
T  25872791 atttgccaattgagttaggacttctaga 25872764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 38033853 - 38033730
Alignment:
Q  173 tagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcattt 270  Q
    ||||| |||||||| | |||||||| ||||| |||| |||||||||||||||||  || |||||||| |||| | ||| ||||||  || ||||||||||    
T  38033853 tagatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccgaccttacaatttcggcattt 38033754  T
Q  271 accagttaagttaggacttctaga 294  Q
     |||||| |||||| |||||||||    
T  38033753 gccagttgagttagaacttctaga 38033730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 42081619 - 42081686
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||| | ||||||||||||    
T  42081619 gtcttagataaagtggtaattcactgaaaataaactcac--acaactgtgaggtccag-gttcgaacccgg 42081686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 25049971 - 25050085
Alignment:
Q  182 tggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggcatttaccagttaa 279  Q
    ||||||| |||| ||||||||| |||||||||||||||| ||  | |||| || || |||||||||||||||||||  || |||||||||| | |||| |    
T  25049971 tggtaatccacttaaattaaactcacatacaactgtgagatcatgagttcaaatccaggtcacgacgtctgacctttcaatttcggcattttctagttga 25050070  T
Q  280 gttaggacttctaga 294  Q
    ||||| |||||||||    
T  25050071 gttagaacttctaga 25050085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 48444152 - 48444233
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtc 249  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||||||| || | | |||||||||| | ||||||||||    
T  48444152 gtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtc 48444233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 34763561 - 34763513
Alignment:
Q  178 aaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccg 226  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  34763561 aaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccg 34763513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 5772819 - 5772946
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || |||||||||  |||||||||||||| |||| |||||||||||||  || |||||||||| ||||||   ||| ||||||| || ||||||    
T  5772819 gtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttcggc 5772918  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| || ||| || || ||||||||||    
T  5772919 atttgcccgttgagctaagacttctaga 5772946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 13887282 - 13887174
Alignment:
Q  184 gtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcggcatttaccagttaagt 281  Q
    ||||| |||||||||||||| ||  |||||||||||||| ||| |||||||||  |||||||||||| |  |||| || |||||||||| |||||| |||    
T  13887282 gtaatccactgaaattaaactca--tacaactgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcggcatttgccagttgagt 13887185  T
Q  282 taggacttcta 292  Q
    || ||||||||    
T  13887184 taagacttcta 13887174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 41183943 - 41183831
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| ||||| |||| |||||||| ||||| |||| | |||||||||||   | |||||||||| ||||| |||||| | ||||| || ||||||    
T  41183943 gtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttcggc 41183844  T
Q  267 atttaccagttaa 279  Q
    |||| ||||||||    
T  41183843 atttgccagttaa 41183831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 5587408 - 5587338
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| |||| ||||||||| ||||   || |||||||||| | ||||||||||||    
T  5587408 gtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccgg 5587338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 5592369 - 5592299
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| |||| ||||||||| ||||   || |||||||||| | ||||||||||||    
T  5592369 gtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccgg 5592299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 56609 - 56482
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| ||||||| || ||||||    
T  56609 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatttcggc 56510  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  56509 atttgccagttgagctaggacttctaga 56482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 11816550 - 11816675
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaatt-aaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcgg 265  Q
    ||||||||| |||||||||| |||||||||| |||| |||||||||||||||||| ||| |||||||||| |||||||||||| ||||||| || |||||    
T  11816550 gtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaatttcgg 11816649  T
Q  266 catttaccagttaagttaggacttct 291  Q
    ||||| |||||| || ||||||||||    
T  11816650 catttgccagttgagctaggacttct 11816675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 10639606 - 10639733
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  10639606 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 10639705  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  10639706 atttgccagttgagctaggacttctaga 10639733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 11459843 - 11459716
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| || ||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| ||||||| || ||||||    
T  11459843 gtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatttcggc 11459744  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  11459743 atttgccagttgagctaggacttctaga 11459716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 33083554 - 33083681
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  33083554 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33083653  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  33083654 atttgccagttgagctaggacttctaga 33083681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 23839987 - 23839860
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||  |||||||||| |||||| ||||| | ||||| || || |||    
T  23839987 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaattttggc 23839888  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| ||||||||||||||||    
T  23839887 atttgccagttgagttaggacttctaga 23839860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 26605752 - 26605625
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||  |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || ||||||    
T  26605752 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 26605653  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  26605652 atttgccagttgagctaggacttctaga 26605625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 39535534 - 39535661
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| | || ||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||| | ||||| || |||| |    
T  39535534 gtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgac 39535633  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| | |||| ||||||||||||||||    
T  39535634 atttgctagttgagttaggacttctaga 39535661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 11708803 - 11708679
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||||||||| |||||||| |||||||||| ||||||||||||||| | |||||||||| |||||| ||||| | ||||  || |||||||||    
T  11708803 ttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttcggcatt 11708704  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | |||||| || |||||||||||||    
T  11708703 tgccagttgagctaggacttctaga 11708679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 19537435 - 19537308
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||| ||| |||||||||||| |||| ||||| | ||||| || ||||||    
T  19537435 gtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatttcggc 19537336  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| |  |||||||||||||    
T  19537335 atttgccagttgaactaggacttctaga 19537308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 37197610 - 37197720
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||||||||||   ||||| || ||||||    
T  37197610 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaatttcggc 37197709  T
Q  267 atttaccagtt 277  Q
    |||| ||||||    
T  37197710 atttgccagtt 37197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 19048882 - 19048755
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||| ||||| |||| |||| |||||||||||| |||||||||||| ||| |||||| | ||||  || ||||||    
T  19048882 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 19048783  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  19048782 atttgccagttgagctaggacttctaga 19048755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 33001830 - 33001751
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccggtcacgacgt 248  Q
    ||||||||| || ||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||| ||||| ||||    
T  33001830 gtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaacccagtcacaacgt 33001751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 34460497 - 34460370
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||| | | |||||||||| |||||| ||||| | ||||| || ||||||    
T  34460497 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 34460398  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || |||||||||||||    
T  34460397 atttgtcagttgagctaggacttctaga 34460370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 45125165 - 45125292
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||| ||| ||||||||||  ||||| ||||| | ||||  || ||||||    
T  45125165 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatttcggc 45125264  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  45125265 atttgccagttgagctaggacttctaga 45125292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 27137918 - 27138044
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaattcggca 267  Q
    ||||||||| |||||||||| |||||||||||||| |||||| |||||| |||||||| |||||||||| |||||||| ||  | ||||  | ||| |||    
T  27137918 gtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggccttcaatttcagca 27138017  T
Q  268 tttaccagttaagttaggacttctaga 294  Q
    |||  ||||| || |||||||||||||    
T  27138018 tttgtcagttgagctaggacttctaga 27138044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 39831444 - 39831570
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| |||| |||||||||||| |||||||||||| ||| |||||| | ||||| || |||||     
T  39831444 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccg-gttcgaacccggatcatgacgtccggccttgcaatttcggt 39831542  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||| ||||    
T  39831543 atttgccagttgagctaggacttataga 39831570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 16654488 - 16654366
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| ||| || |||||||| ||| ||||| |||| ||||||||||||| ||| |||||||| ||| ||||| |||| | ||||| || |||||||||    
T  16654488 ttagatgaaggggcaattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcggcatt 16654389  T
Q  270 taccagttaagttaggacttcta 292  Q
    || ||||| ||||||||||||||    
T  16654388 tatcagttgagttaggacttcta 16654366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 4851448 - 4851367
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtc 249  Q
    ||||| ||| |||||||||| |||| ||||||||| |||| ||||||||||||||||| ||| |||||||| ||||||||||    
T  4851448 gtcttggatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtc 4851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 7275886 - 7276014
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| || | ||||||||   ||| ||||||||||||||||| |||||||||| || |||||| || ||||||| || ||||||    
T  7275886 gtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgcaatttcggc 7275985  T
Q  267 a-tttaccagttaagttaggacttctaga 294  Q
    | |||  ||||| ||||||||||||||||    
T  7275986 attttgtcagttgagttaggacttctaga 7276014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 34239820 - 34239948
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || ||||||||||| | ||||||||||| || | |||||||| |||| | | |||||||| || ||||||||||||||||||  || ||||||    
T  34239820 gtcttaaatgaagtggtaatttattgaaattaaactcatacacaactgtaaggttctgagttcgaactcgagtcacgacgtctgaccttacaatttcggc 34239919  T
Q  267 atttaccagttaagttaggacttctagat 295  Q
    |||| | |||  |||||||||||||||||    
T  34239920 atttgctagtagagttaggacttctagat 34239948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 29659218 - 29659288
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||  | ||||||||||||    
T  29659218 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgg 29659288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 42578296 - 42578243
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 42578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 19816348 - 19816221
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| |||| |||||  ||||||| ||||| || | ||||||| ||||| ||| |||| ||||||| |||| ||||| | ||||| |||| |||     
T  19816348 gtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatttcggt 19816249  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  19816248 atttgccagttgagctaggacttctaga 19816221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 292
Target Start/End: Original strand, 20497592 - 20497715
Alignment:
Q  171 cttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt-cggcat 268  Q
    ||||||| |||||||||  ||||||||| |||| ||||||||| |||||||| ||| ||| ||||| |  |||||||||   ||||| ||||| || |||    
T  20497592 cttagatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacctgaatcacgacgttcaaccttataatttcgacat 20497691  T
Q  269 ttaccagttaagttaggacttcta 292  Q
    || | |||| ||||||||||||||    
T  20497692 tttctagttgagttaggacttcta 20497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 4801001 - 4800923
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtc 249  Q
    |||||| |||||||||||||||| |||||||| |||| | ||| | ||||| ||| |||||||| | ||||||||||||    
T  4801001 ttagatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtc 4800923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 44181887 - 44181944
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccg 226  Q
    ||||||||| ||||| |||| |||||||| ||||| |||| ||||||||||| |||||    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtgagatcccg 44181944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 34234656 - 34234531
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| ||||||| ||  ||||||||||||| ||||  ||||| ||||||| || |||| ||| | | |||| || || ||||||| |||| ||||    
T  34234656 gtcttagatgaagtggtgatctactgaaattaaactcaca--caactatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaatttcggc 34234559  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  34234558 atttgccagttgagctaggacttctaga 34234531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 45201903 - 45201999
Alignment:
Q  200 aaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttctaga 294  Q
    |||| |||| ||||||||||||| ||| |||||||| ||| |||||||| | ||||||  || |||| ||||| ||| || ||||||||||||||||    
T  45201903 aaactcacacacaactgtgaggttccgagttcgaactcggatcacgacgaccgaccttacaatttcgacatttgccaattgagttaggacttctaga 45201999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 862 - 989
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  862 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 961  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  962 atttgccagttgagctaggacttctaga 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 70523 - 70650
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||| ||||| ||||| |||||| ||||||| || ||||||    
T  70523 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatttcggc 70622  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  70623 atttgccagttgagctaggacttctaga 70650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 6602518 - 6602645
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  6602518 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 6602617  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  6602618 atttgccagttgagctaggacttctaga 6602645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 6677971 - 6678098
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  6677971 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 6678070  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  6678071 atttgccagttgagctaggacttctaga 6678098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 32333242 - 32333115
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || ||||||    
T  32333242 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 32333143  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  32333142 atttgccagttgagctaggacttctaga 32333115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 45264640 - 45264766
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaattcggca 267  Q
    ||||||||  |||||||||| |||||||||||||| |||| | ||||||||||||||| ||||||||||| ||||||||||  |||||   | |||||||    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacctgcaatttcggca 45264739  T
Q  268 tttaccagttaagttaggacttctaga 294  Q
    ||| |||||| ||||||||||||||||    
T  45264740 tttgccagttgagttaggacttctaga 45264766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 1078648 - 1078775
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||  ||||| |||||| | ||||| || ||||||    
T  1078648 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaatttcggc 1078747  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||||||||| || || ||||||||||    
T  1078748 atttaccagttgagctacgacttctaga 1078775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 28817384 - 28817257
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||| ||||| |||||||||| |||||| ||||| | ||||| || ||||||    
T  28817384 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 28817285  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  28817284 atttgccagttgagctaggacttctaga 28817257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 31969720 - 31969847
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||  |||| |||||| ||||||||||||||||||||||| ||| |||||||| ||||| || ||||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttcggc 31969819  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| ||| ||||| || ||||||||||    
T  31969820 atttgccaattaagctatgacttctaga 31969847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 35779497 - 35779624
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || || |||    
T  35779497 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 35779596  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  35779597 atttgccagttgagctaggacttctaga 35779624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 42192639 - 42192766
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||| ||||| |||||||| | ||||| |||||| | ||||| || ||||||    
T  42192639 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatttcggc 42192738  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  42192739 atttgccagttgagctaggacttctaga 42192766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 10963242 - 10963367
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| ||||  |||||||||||||||| ||||||||| || |||| ||||  | |||||||| ||||||    
T  10963242 gtcttagatgaagtggtaatccactgaaaataaactcaca--caactgtgaggtcccgggttcgaacctggatcacaacgttcggccttgtaatttcggc 10963339  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  10963340 atttgccagttgagctaggacttctaga 10963367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 1340 - 1467
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||  |||||| ||||| | ||||| || || |||    
T  1340 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaattttggc 1439  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || ||| |||||||||    
T  1440 atttgccagttgagctagaacttctaga 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 4530982 - 4531109
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| ||| ||||||||||||| |||||||||| ||||| ||||||   ||||| || ||||||    
T  4530982 gtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatttcggc 4531081  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| ||| || || |||||||||||||    
T  4531082 atttgccaattgagctaggacttctaga 4531109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 7792789 - 7792662
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||| ||||| |||||||| ||||| |||| ||||||||||| ||||| ||||||||||| ||||| |||||   ||||| || ||||||    
T  7792789 gtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatttcggc 7792690  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  7792689 atttgccagttgagctaggacttctaga 7792662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 40911347 - 40911222
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggca 267  Q
    |||||||| |||||||||  |||||||||||||| |||| |||  |||||||||||| |||||||||| |||||||||||| | ||||| || |||||||    
T  40911347 tcttagatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtcccg-gttcgaacccgggtcacgacgtccggccttgcaatttcggca 40911249  T
Q  268 tttaccagttaagttaggacttctaga 294  Q
    ||| |||||| || ||| |||||||||    
T  40911248 tttgccagttgagctagcacttctaga 40911222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 42885302 - 42885192
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||| ||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  42885302 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 42885203  T
Q  267 atttaccagtt 277  Q
    |||| ||||||    
T  42885202 atttgccagtt 42885192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 7813447 - 7813323
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||||| || || | ||||| || ||| |||||    
T  7813447 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgcaatttcagcatt 7813348  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | || ||| || |||||||||||||    
T  7813347 tgccggttgagctaggacttctaga 7813323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 3822524 - 3822397
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||  ||||||||||||||| ||||||||| |||| ||||||||||| ||| | |||||||||| |||||| ||||| ||||||  || ||||||    
T  3822524 gtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttacaatttcggc 3822425  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| |  ||| |||||||||    
T  3822424 atttgccagttgaactagaacttctaga 3822397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 5385456 - 5385385
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtc 249  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||||  ||||||||||||    
T  5385456 aagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtc 5385385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 39303438 - 39303313
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaatt-aaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcgg 265  Q
    ||||||||| |||||||||| |||||||||| |||| |||| |||||||||||||| || |||| |||||  |||| |||||| | ||||| || |||||    
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcgg 39303339  T
Q  266 catttaccagttaagttaggacttct 291  Q
    ||||| |||||| || ||||||||||    
T  39303338 catttgccagttgagctaggacttct 39303313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 12534720 - 12534845
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| ||||||||||  ||||||| ||||| |||   |||||||||| ||| | |||||||||||| |||||||||| | ||||| |||| ||||    
T  12534720 gtcttagatgaagtggtaatctactgaaaataaactcacg--caactgtgagatcctgggttcgaacccggatcacgacgtccggccttgcaatttcggc 12534817  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  12534818 atttgccagttgagctaggacttctaga 12534845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 290
Target Start/End: Original strand, 41849233 - 41849354
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggca 267  Q
    |||||||| || ||||||| |||||||||||||| |||| ||||| ||||||| |||  ||||||||| | |||||||||| ||||||| || |||||||    
T  41849233 tcttagatgaaatggtaat-cactgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaatttcggca 41849331  T
Q  268 tttaccagttaagttaggacttc 290  Q
    ||| |||||| | ||| ||||||    
T  41849332 tttgccagttgaattaagacttc 41849354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 31532128 - 31532181
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtccc 225  Q
    |||||| |||||||||| |||||||||||||| |||| ||||||||||||||||    
T  31532128 ttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccc 31532181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 18752468 - 18752381
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgacctt 256  Q
    ||||| || |||||  ||| ||||||||||||||||||| |||||||| |||| ||| ||||||| |||| |||||||||| ||||||    
T  18752468 tcttanatgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgacctt 18752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 39435410 - 39435283
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||| ||||| |||  ||||||||| |||| |||||||||||||| || |||||||||| | ||| |||||| ||||||| || || | |    
T  39435410 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgcaattttgac 39435311  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || ||| |||||||||    
T  39435310 atttgccagttgagctagaacttctaga 39435283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 13891218 - 13891149
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg 238  Q
    ||||||||| |||||||||  |||||||| ||||| |||| |||||||||||||||   |||||||||||    
T  13891218 gtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccg 13891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 2907142 - 2907054
Alignment:
Q  169 gtcttagataaagtggtaattcact-gaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttg 257  Q
    ||||||||  |||||||||| |||| |||||||||| | ||||  |||||||||||||| |||| ||||||| |||||||||| |||||||    
T  2907142 gtcttagacgaagtggtaatccacttgaaattaaactcccata--actgtgaggtcccgggttcaaacccggatcacgacgtccgaccttg 2907054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 7403696 - 7403782
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgacctt 256  Q
    |||||||| |||||||||| |||||||||||| | |||| |||||||||| ||| ||  ||||||| || ||||||||||| ||||||    
T  7403696 tcttagatgaagtggtaat-cactgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgacctt 7403782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 42364702 - 42364752
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtga 219  Q
    |||||||||||||||||||   ||||||||||||| |||| ||||||||||    
T  42364702 gtcttagataaagtggtaaactactgaaattaaactcacacacaactgtga 42364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 294
Target Start/End: Complemental strand, 18386806 - 18386709
Alignment:
Q  199 taaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttctaga 294  Q
    ||||| |||| ||||||||||||||||| ||||||||||| |||| ||| || ||||||| || ||| ||||||  ||||| || ||| |||||||||    
T  18386806 taaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtcagttgagctagaacttctaga 18386709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 29425479 - 29425422
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccg 226  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| || ||| |||||    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaattgcgagatcccg 29425422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 31695269 - 31695334
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa 234  Q
    ||||||||| |||||||||  || ||||||||||| |||| |||| |||||||||||  |||||||    
T  31695269 gtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaa 31695334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 9775042 - 9775110
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc 237  Q
    ||||||||| |||| ||||| || | ||||||||| |||| | ||||||||||| ||| ||||||||||    
T  9775042 gtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaaccc 9775110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 33621622 - 33621495
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  33621622 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33621523  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  33621522 atttgccagttgagctaggacttctaga 33621495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 33704344 - 33704217
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  33704344 gtcttaaatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33704245  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  33704244 atttgccagttgagctaggacttctaga 33704217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 21000820 - 21000693
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||| |||| |||||||||  ||||||||||||||||||| |||| |||||||||||| |||||||||| ||||| |||||  | ||||| || ||||||    
T  21000820 gtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatttcggc 21000721  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  21000720 atttgccagttgagctaggacttctaga 21000693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 28323060 - 28322933
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||| ||||| |||| |||| |||||||||||| |||||||||||| ||| |||||| | ||||  || ||||||    
T  28323060 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 28322961  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  28322960 atttgccagttgagctaggacttctaga 28322933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 4464255 - 4464152
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| ||||||||||||||||  |||||||||||| ||| |||||| | ||||| || ||||||    
T  4464255 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaatttcggc 4464156  T
Q  267 attt 270  Q
    ||||    
T  4464155 attt 4464152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 21037418 - 21037292
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg-gtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||| |||  |||||||||| ||||| ||||| | ||||| || ||| ||    
T  21037418 gtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggt-ccggattcgaacccgagtcacaacgtccggccttgcaatttcagc 21037320  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || ||| |||||||||    
T  21037319 atttgccagttgagctagaacttctaga 21037292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 361139 - 361070
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg 238  Q
    ||||||||| ||||| |||| |||||||||||||| |||||| ||||||||||| ||| |||||||||||    
T  361139 gtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccg 361070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 19145598 - 19145505
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccggtcacgacgtctgaccttgtaatt 262  Q
    ||||||||| |||||||||| |||||||||||||  |||| |||| |||||||||||| |||| || | |||||||||||| | ||||| ||||    
T  19145598 gtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttcaaaacgggtcacgacgtccggccttgcaatt 19145505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 29009650 - 29009715
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa 234  Q
    ||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||||||||  |||||||    
T  29009650 gtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaa 29009715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 35218640 - 35218697
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccg 226  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||||||||||||    
T  35218640 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccg 35218697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 2959277 - 2959150
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||| |||| |||||||| | ||| |||||||||| |||| |||||||||||||| || |||||||||   |||||||  || | ||||| || ||||||    
T  2959277 gtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatttcggc 2959178  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| | |||| ||||||||||||||||    
T  2959177 atttgctagttgagttaggacttctaga 2959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 11572106 - 11572048
Alignment:
Q  199 taaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgacctt 256  Q
    ||||| |||| ||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  11572106 taaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggcctt 11572048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 10999418 - 10999459
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgag 220  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  10999418 aagtggtaatccactgaaattaaactcacatacaactgtgag 10999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 16518549 - 16518457
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt 262  Q
    ||||||||| || ||||||| |||||||| ||||| ||||  |||||||||| ||| | |||||||||| |||||| ||||| ||||||| ||||    
T  16518549 gtcttagatgaaatggtaatccactgaaaataaactcaca--caactgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgcaatt 16518457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 28592128 - 28592182
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtc 223  Q
    |||||||||||| ||||||| || ||||| ||||| |||| ||||||||||||||    
T  28592128 gtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtc 28592182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32289473 - 32289408
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa 234  Q
    ||||| ||| ||||||||||||||||| | |||||  ||| |||||||||||||| || |||||||    
T  32289473 gtctttgatgaagtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaa 32289408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 24619079 - 24619159
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgt 248  Q
    ||||||||| ||||||||||  ||||||||||||| |||| |||| | ||||||| || | |||||| | |||||||||||    
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgt 24619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 13204085 - 13203958
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| | ||||||||||||||| |||||||||| |||||||||||| | ||||| || ||||||    
T  13204085 gtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 13203986  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  13203985 atttgccagttgagctaggacttctaga 13203958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 27721549 - 27721432
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccagt 276  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||| |||| ||||| |||||||||||| ||| ||| || |||||||||| |||||    
T  27721549 aagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattttccagt 27721450  T
Q  277 taagttaggacttctaga 294  Q
    | || |||||||||||||    
T  27721449 tgagctaggacttctaga 27721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 35317697 - 35317824
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||| ||| |||||  ||||| ||||||| || ||||||    
T  35317697 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatttcggc 35317796  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  35317797 atttgccagttgagctaggacttctaga 35317824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 21018351 - 21018224
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||| | || || |||    
T  21018351 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaattttggc 21018252  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  21018251 atttgccagttgagctaggacttctaga 21018224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 29266003 - 29265876
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||| || |||||| || |  |||||||||| |||| |    
T  29266003 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatttcgac 29265904  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| | |||| ||||||||||||||||    
T  29265903 attttctagttgagttaggacttctaga 29265876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 31909385 - 31909479
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt 262  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||||| ||||| ||||    
T  31909385 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgcaatt 31909479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 4824939 - 4825068
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| || ||||| ||||| |||| ||||||||||||||||| ||| |||||  |||||| ||||| | ||||| || ||||||    
T  4824939 gtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatttcggc 4825038  T
Q  267 atttaccagttaagttaggacttctagatt 296  Q
    |||| |||||| || |||||||||||||||    
T  4825039 atttgccagttgagctaggacttctagatt 4825068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 1191543 - 1191667
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||| ||||  |||||||||||||| |||| |||| |||||||||||| |||||||||||| |||||||||| | ||||| || |||| ||||    
T  1191543 ttagatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatt 1191642  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | |||||| || |||||||||||||    
T  1191643 tgccagttgagctaggacttctaga 1191667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 2971112 - 2970985
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| ||| |||| ||||| |||| |||||||||||||| |  |||||||||| |||||| ||||||||||||  || |||| |    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatttcgac 2971013  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||| ||||| || |||||||||||||    
T  2971012 atttatcagttgagctaggacttctaga 2970985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 12257484 - 12257357
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||| | |||||||| | |||||||||| |||||| ||||||| ||||  |||| ||||    
T  12257484 gtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttacaatttcggc 12257385  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  12257384 atttgccagttgagctaggacttctaga 12257357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 9576985 - 9577088
Alignment:
Q  193 tgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttc 290  Q
    ||||||||||| |||||||||||||||||| | | |||||||||| ||||| |||||||| ||||| || ||| |||||| |||||| || |||||||||    
T  9576985 tgaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttcagcatttgccagttgagctaggacttc 9577084  T
Q  291 taga 294  Q
    ||||    
T  9577085 taga 9577088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 6021117 - 6020995
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    ||||||||||||||||| |||||||| ||||| |||| ||||||| ||||||||| ||||||| || |||||| ||||| | ||||| || || | ||||    
T  6021117 ttagataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattttgacatt 6021018  T
Q  270 taccagttaagttaggacttcta 292  Q
    | ||| || ||||||||||||||    
T  6021017 tgccaattgagttaggacttcta 6020995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 8734125 - 8734000
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacc-cacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaa-ttcgg 265  Q
    ||||||||| |||||||||| ||||||| ||||| | ||| |||||||||||||| ||| |||||||||  |||||||||||| | ||||| || ||| |    
T  8734125 gtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttcag 8734026  T
Q  266 catttaccagttaagttaggacttct 291  Q
    ||||| |||||| || ||||||||||    
T  8734025 catttgccagttgagctaggacttct 8734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 35546061 - 35545996
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa 234  Q
    ||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||  |||||||    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaa 35545996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 32143414 - 32143471
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccg 226  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||||||||||||    
T  32143414 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccg 32143471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 11124780 - 11124653
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||| |||||||||||||||| || | |||||| | | ||||||| |  |||||||||||| | ||||| || || | |    
T  11124780 gtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgcaattttgac 11124681  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  11124680 atttgccagttgagctaggacttctaga 11124653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 40177749 - 40177625
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt-cggcatt 269  Q
    |||||| |||||||||| |||||||| ||||| |||| ||||| |||| || ||| ||| ||| || |||||| ||||| | ||||| |||| || ||||    
T  40177749 ttagatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcgacatt 40177650  T
Q  270 taccagttaagttaggacttctaga 294  Q
    |  |||||||| |||||||||||||    
T  40177649 tgtcagttaagctaggacttctaga 40177625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 2786398 - 2786272
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| |||||||||| ||||||| |||||| || | ||||||||||||||||  ||| |||  ||| ||||| |||| ||||||  |||| ||||    
T  2786398 gtcttagatgaagtggtaatccactgaa-ttaaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttcggc 2786300  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| ||| || | ||||||||||||||    
T  2786299 atttgccaattgaattaggacttctaga 2786272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 17984745 - 17984811
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg 238  Q
    |||||| ||||| |||  |||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  17984745 ttagatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccg 17984811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 1174079 - 1173952
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  1174079 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 1173980  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  1173979 atttgccagttgagctaggacttctaga 1173952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 34739408 - 34739281
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  34739408 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 34739309  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  34739308 atttgccagttgagctaggacttctaga 34739281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 53457952 - 53457825
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||||||||||||  ||||||||| ||||| |||||| ||||||| || ||||||    
T  53457952 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatttcggc 53457853  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  53457852 atttgccagttgagctaggacttctaga 53457825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 300
Target Start/End: Complemental strand, 55400356 - 55400223
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| ||||||||||| |||||| ||| ||||||| |||| ||| |||||| | ||||| || ||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttcggc 55400257  T
Q  267 atttaccagttaagttaggacttctagattaata 300  Q
    ||||||||||| |||||||| ||||||| |||||    
T  55400256 atttaccagttgagttaggatttctagactaata 55400223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 19849503 - 19849630
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  || ||||| ||||| |||| ||||||||||||||||| |||||||||||| |||||||||| | ||||| || ||||||    
T  19849503 gtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcggc 19849602  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  19849603 atttgccagttgagctaggacttctaga 19849630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 26424858 - 26424984
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  26424858 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccg-ccttgcaatttcggc 26424956  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  26424957 atttgccagttgagctaggacttctaga 26424984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 28798388 - 28798515
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||| |||||||| |||||||||| |||||||||||| | ||||| || ||||||    
T  28798388 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 28798487  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| |  |||||||||||||    
T  28798488 atttgccagttgaactaggacttctaga 28798515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 43139906 - 43140033
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  43139906 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 43140005  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || ||| |||||||||    
T  43140006 atttgccagttgagctagaacttctaga 43140033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 55214779 - 55214648
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggca 267  Q
    ||||||||||||||||||| |||||||| ||||| || | ||||||||||||||||| |||||||||| |||||||||||| | ||||| || || ||||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttggca 55214680  T
Q  268 tttaccagttaagttaggacttctagattaat 299  Q
    |||  ||||| ||||| |||||||||| ||||    
T  55214679 tttgacagttgagttaagacttctagactaat 55214648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 18257457 - 18257330
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||  ||||||||||||||||| | |||||||||| ||| |||||| | ||||| || ||||||    
T  18257457 gtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatttcggc 18257358  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  18257357 atttgccagttgagctaggacttctaga 18257330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 45874183 - 45874056
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || || |||    
T  45874183 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 45874084  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || |||||||||||||    
T  45874083 atttgtcagttgagctaggacttctaga 45874056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 39807962 - 39807865
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtctgaccttgtaa-ttcggcatttacca 274  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||| |||||||| | |||||||| ||||| ||||| || ||||||||||||||    
T  39807962 aagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaatttcggcatttacca 39807865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 54768432 - 54768559
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| ||||||||  |||| | || ||||||||||||||| | |||||||||| ||||| |||||| | ||||| || ||||||    
T  54768432 gtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 54768531  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  54768532 atttgccagttgagctaggacttctaga 54768559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 12735559 - 12735471
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgacctt 256  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||| | |||||||||| |||||| ||||||| ||||    
T  12735559 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggcctt 12735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 238458 - 238585
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||| ||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| | ||||   ||||| || ||||||    
T  238458 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcggc 238557  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || |||||||||||||    
T  238558 atttgacagttgagctaggacttctaga 238585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 12867969 - 12867842
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||  ||||||||||| ||||  |||||||| | |||||||||||| ||||||| || ||||||    
T  12867969 gtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaatttcggc 12867870  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || ||| |||||||||    
T  12867869 atttgacagttgagctagaacttctaga 12867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 2075633 - 2075565
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc 237  Q
    ||||||||||||||| ||| ||| ||||||||||| |||| | ||||||||||||||| ||||||||||    
T  2075633 gtcttagataaagtgataaatcattgaaattaaactcacacataactgtgaggtcccgggttcgaaccc 2075565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 23417483 - 23417603
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||| | |||||| |||||||||| |||||| ||||| | ||||| || || |||    
T  23417483 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 23417582  T
Q  267 atttaccagttaagttaggac 287  Q
    |||| |||||| || ||||||    
T  23417583 atttgccagttgagctaggac 23417603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 1966678 - 1966611
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc 236  Q
    ||||||||| |||| ||||| |||||||||||||| |||| |||||||||||||||||  ||||||||    
T  1966678 gtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 23710337 - 23710460
Alignment:
Q  173 tagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggcattt 270  Q
    ||||| |||||||||| |||||||||||||| ||||   ||||||||||| ||  ||||||| || |||||||||||| | ||||| || |||| |||||    
T  23710337 tagatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttcgacattt 23710436  T
Q  271 accagttaagttaggacttctaga 294  Q
    ||||||| || || ||||||||||    
T  23710437 accagttgagctatgacttctaga 23710460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 11278106 - 11277983
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |    ||||||||||||||||| ||| |||||| ||||| || ||| | ||||| || ||||||    
T  11278106 gtcttagatgaagtggtaaaccactgaaattaaactc----acaactgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatttcggc 11278011  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  11278010 atttgccagttgagctaggacttctaga 11277983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 19225387 - 19225261
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||| ||||| |||  |||| |||||||||||| |||||||||||| ||| |||||| | | ||  || ||||||    
T  19225387 gtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttacaatttcggc 19225288  T
Q  267 atttaccagttaagttaggacttctag 293  Q
    |||| |||||| || ||||||||||||    
T  19225287 atttgccagttgagctaggacttctag 19225261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 22608113 - 22608019
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt 262  Q
    |||| |||| |||| ||||| || ||||||||||| || | ||||||||||||||||| |||||||||| |||||||||||| | ||||| ||||    
T  22608113 gtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatt 22608019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 29581044 - 29581137
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacc-cggtcacgacgtctgaccttgtaatt 262  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||||||||| || |||||||||  |||||||||||| | ||||| ||||    
T  29581044 gtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaatt 29581137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 37134166 - 37134049
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatttaccagt 276  Q
    |||||||||  |||||||||||||| |||| |||||||||| ||  || |||||||||||| ||| ||| || |||||||||| ||| |||||| |||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttcagcatttgccagt 37134067  T
Q  277 taagttaggacttctaga 294  Q
    | |  |||||||||||||    
T  37134066 tgaactaggacttctaga 37134049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 19673929 - 19674056
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || |||||||||| |||||||||||||| | || | || |||||||||||| |||||||||| |||||| ||||  | ||||| || |||  |    
T  19673929 gtcttaaatgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgcaatttctac 19674028  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||||||||| || || ||||||||||    
T  19674029 atttaccagttgagctaagacttctaga 19674056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 23532165 - 23532118
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcccg 226  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  23532165 aagtggtaattcactgaaattaaactcacacacaactgtgaagtcccg 23532118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 32441125 - 32441211
Alignment:
Q  210 acaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttctaga 294  Q
    ||||||||||||||||| |||||||||| ||||| || ||||| ||||| || |||| ||||| |||||| || |||||||||||||    
T  32441125 acaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcgacatttgccagttgagctaggacttctaga 32441211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 50033510 - 50033440
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    |||||| || ||||||||||||| |||||||||||  ||| |||||||||| ||| | |||||||||||||    
T  50033510 gtcttatatgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgg 50033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 31015110 - 31015057
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    ||||||||| |||||||||  |||||||||||||| |||| |||||||||||||    
T  31015110 gtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggt 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 51287730 - 51287641
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaatt-aaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgacctt 256  Q
    ||||||||| || |||||||||||||||||| |||| |||| |||||||||||||  || |||  ||||| | |||||||||||||||||    
T  51287730 gtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggtttcgggtttaaacccagatcacgacgtctgacctt 51287641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 52171990 - 52172043
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    |||||| ||||||||||||| |||||||||||||| |||| |||| ||||||||    
T  52171990 gtcttaaataaagtggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 33770696 - 33770628
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc 237  Q
    ||||||||| ||| |||||  |||||||||||||| |||| |||||| ||| |||||| ||||||||||    
T  33770696 gtcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaaccc 33770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 12767191 - 12767088
Alignment:
Q  193 tgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttc 290  Q
    ||||||||||| |||| |||||||||||||  ||  ||||||||| | ||| |||||| || |||  || ||||||||||||||||| || |||||||||    
T  12767191 tgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttcggcatttaccagttgagctaggacttc 12767092  T
Q  291 taga 294  Q
    ||||    
T  12767091 taga 12767088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 32778238 - 32778159
Alignment:
Q  182 tggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt 262  Q
    ||||||| |||| ||| ||||| ||||  ||| ||||||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  32778238 tggtaatccactaaaaataaactcaca--caattgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaatt 32778159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 16555435 - 16555382
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggt 222  Q
    ||||||||| ||||||||||||| | ||||||||  |||| |||||||||||||    
T  16555435 gtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggt 16555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 19814229 - 19814152
Alignment:
Q  173 tagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtc 249  Q
    ||||| ||||||||||  ||||||||||||| |||| | || |||||||||||  ||| |||||| ||||||||||||    
T  19814229 tagatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtc 19814152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 2864751 - 2864875
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaattc-ggcatt 269  Q
    |||||| |||||||||  |  ||||||||| | |||| |||||| |||||| |   |||||||||||| ||||||||||   ||||| ||||  ||||||    
T  2864751 ttagatgaagtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaatttaggcatt 2864850  T
Q  270 taccagttaagttaggacttctaga 294  Q
    | |||||| ||||||||||||||||    
T  2864851 tgccagttgagttaggacttctaga 2864875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 37620745 - 37620677
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc 237  Q
    ||||| ||| |||||||||| |||||||||||||| |||| | | ||||||  ||||| ||||||||||    
T  37620745 gtctttgatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaaccc 37620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 7824454 - 7824581
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  7824454 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 7824553  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  7824554 atttgccagttgagctaggacttctaga 7824581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 29689482 - 29689609
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  29689482 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 29689581  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  29689582 atttgccagttgagctaggacttctaga 29689609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 54158394 - 54158267
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||||| ||| |||||| | ||||| || ||||||    
T  54158394 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggc 54158295  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  54158294 atttgccagttgagctaggacttctaga 54158267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 9349679 - 9349786
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatt 269  Q
    |||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||||| |||||||||| ||||||| || |||||||||    
T  9349679 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaatttcggcatt 9349778  T
Q  270 taccagtt 277  Q
    | ||||||    
T  9349779 tgccagtt 9349786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 42392805 - 42392932
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||||||||| |||| |||| |||||||||||| |||||| ||||| ||| |||||| ||||||| || ||||||    
T  42392805 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatttcggc 42392904  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  42392905 atttgccagttgagctaggacttctaga 42392932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 43247650 - 43247777
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| ||||| | ||||| || || |||    
T  43247650 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaattttggc 43247749  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  43247750 atttgccagttgagctaggacttctaga 43247777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 51665925 - 51666052
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||||| |||||||| |||||||||| ||||| |||||| | ||||| |||| ||||    
T  51665925 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 51666024  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  51666025 atttgccagttgagctaggacttctaga 51666052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 54151681 - 54151808
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| || | ||||||||||||||||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  54151681 gtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 54151780  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  54151781 atttgccagttgagctaggacttctaga 54151808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 55018044 - 55018161
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcatttaccagt 276  Q
    |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||| |||||||||||| | ||||| || || | ||||| |||||    
T  55018044 aagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttgccagt 55018143  T
Q  277 taagttaggacttctaga 294  Q
    | ||||||||||||||||    
T  55018144 tgagttaggacttctaga 55018161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 4601553 - 4601426
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| || ||||||| |||||||| ||||| |||| ||||||||||||| ||| |||||||||| ||||| |||||| | ||||| || ||||||    
T  4601553 gtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4601454  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  4601453 atttgccagttgagctaggacttctaga 4601426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 475281 - 475374
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaatt 262  Q
    ||||||||| |||||||||||||||||| |||||| |||| ||||||||||||| ||| |||||||||||| ||| |||||| ||||||| ||||    
T  475281 gtcttagatgaagtggtaattcactgaa-ttaaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaatt 475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 36228994 - 36229104
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| || ||||| ||||| |||| ||||||||||||||||| |||||||||||| ||| |||||| | ||||| || ||||||    
T  36228994 gtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggc 36229093  T
Q  267 atttaccagtt 277  Q
    |||| ||||||    
T  36229094 atttgccagtt 36229104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 3112995 - 3113105
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||| ||||| |||||||| | ||| |||||||| | ||||| || ||||||    
T  3112995 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaatttcggc 3113094  T
Q  267 atttaccagtt 277  Q
    |||| ||||||    
T  3113095 atttgccagtt 3113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 38257304 - 38257397
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt 262  Q
    |||||||| |||||||||| | |||||||||||| |||| |||| |||||||| | | |||||||||| |||||||||||| ||||||| ||||    
T  38257304 tcttagatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatt 38257397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 40756728 - 40756855
Alignment:
Q  170 tcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacga-cgtctgaccttgtaa-ttcggc 266  Q
    |||||||| |||||||||   ||||||||||||| ||||  ||||||||||||| || ||||||| |||| ||| || |||||||||||| || || |||    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaatccggatcatgatcgtctgaccttgcaattttggc 40756827  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| ||||||||||||||||    
T  40756828 atttttcagttgagttaggacttctaga 40756855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 43775351 - 43775224
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||||||||| || ||||||||||||| | |||  ||||||| |  ||||| ||||| ||||||  || ||||||    
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttcggc 43775252  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| |||||| |||| ||||    
T  43775251 atttgccagttgagttagaacttttaga 43775224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 50729652 - 50729525
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| ||||||||||  | ||||||||||| |||||| ||||| |||||| | |||||||| || | |||||||||||||||||  || ||||||    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50729553  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || ||| |||||||||    
T  50729552 atttgtcagttgagctagaacttctaga 50729525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 50783197 - 50783324
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaa-cccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| ||||||||||  | ||||||||||| |||||| ||||| |||||| | |||||||| || | |||||||||||||||||  || ||||||    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50783296  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||  ||||| || ||| |||||||||    
T  50783297 atttgtcagttgagctagaacttctaga 50783324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 35461504 - 35461606
Alignment:
Q  194 gaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggcatttaccagttaagttaggacttct 291  Q
    |||| ||||| |||| ||||||||||||| ||| |||||||||||| |||| ||||| ||||||| || |||||||||| |||||| || ||| ||||||    
T  35461504 gaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggcatttgccagttgagctagaacttct 35461603  T
Q  292 aga 294  Q
    |||    
T  35461604 aga 35461606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 28844633 - 28844505
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaat-taaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcgg 265  Q
    ||||||||| |||||||||| ||||||||  ||||| |||| ||||||||||||| ||  |||||||||| |||||| ||||| | ||||| || |||||    
T  28844633 gtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaatttcgg 28844534  T
Q  266 catttaccagttaagttaggacttctaga 294  Q
    |||||  ||||| || ||| |||||||||    
T  28844533 catttgtcagttgagctagaacttctaga 28844505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 32001424 - 32001551
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || ||||||||| ||||||||| ||||| |||| ||||||||||| || || ||||||||| || ||| || ||  | ||||  || ||||||    
T  32001424 gtcttatatgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttacaatttcggc 32001523  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||||||||| || |||||||||||||    
T  32001524 atttaccagttgaggtaggacttctaga 32001551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 33334736 - 33334609
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaac-ccggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    |||||| || ||||| ||||  ||||||||||||| |||| |||||||||||||||||  ||||||| | |||||| ||||| | | ||| || ||||||    
T  33334736 gtcttatatgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgcaatttcggc 33334637  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| | |||| || |||||||||||||    
T  33334636 atttgcaagttgagctaggacttctaga 33334609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 52500966 - 52500839
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| ||||||||||  ||||||| ||||| |||| |||||||||||||  |  |||||||||||| ||| |||||| | ||||  || |||| |    
T  52500966 gtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttacaatttcgac 52500867  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  52500866 atttgccagttgagctaggacttctaga 52500839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 28458790 - 28458664
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccggtcacgacgtctgaccttgtaa-ttcggca 267  Q
    ||||||||| ||||||||||| | |||| ||||||  |||  |||||||||||| | | |||| |||| | ||||||| |||| ||||| || |||| ||    
T  28458790 gtcttagatgaagtggtaatttattgaagttaaacttacacgcaactgtgaggttctgggttcaaaccggatcacgacatctggccttgcaatttcgaca 28458691  T
Q  268 tttaccagttaagttaggacttctaga 294  Q
    |||  ||||| ||||||||||||||||    
T  28458690 tttgtcagttgagttaggacttctaga 28458664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 7958694 - 7958627
Alignment:
Q  172 ttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg 239  Q
    |||||| |||||||||| |||| ||| |||||  ||| | ||||||||||||||| ||||||||||||    
T  7958694 ttagatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccgg 7958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 47635005 - 47635132
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaatt-cggc 266  Q
    ||||||||| ||||||||||  |||||||||||||  ||| | ||||| ||||||| |  ||||||||| |||||| | ||| ||||||| |||| |       
T  47635005 gtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaatgtccgaccttgcaattccaaa 47635104  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    ||||||||||| | ||||||||||||||    
T  47635105 atttaccagttgaattaggacttctaga 47635132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 27230794 - 27230744
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtga 219  Q
    |||| |||| ||||||||||||||||||||||||  |||| ||||||||||    
T  27230794 gtctgagatgaagtggtaattcactgaaattaaattcacacacaactgtga 27230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 448885 - 448930
Alignment:
Q  179 aagtggtaattcactgaaattaaacccacatacaactgtgaggtcc 224  Q
    |||||||||| |||| ||||||||| |||| |||||||||||||||    
T  448885 aagtggtaatccactaaaattaaactcacaaacaactgtgaggtcc 448930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 1778977 - 1778852
Alignment:
Q  171 cttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggcat 268  Q
    ||||||| |||||||||| || ||||| ||||  || | |||| |||||||| ||| |||||||||| |||||| | ||| | ||||| || ||||||||    
T  1778977 cttagatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcat 1778878  T
Q  269 ttaccagttaagttaggacttctaga 294  Q
    ||  ||||| || |||||||||||||    
T  1778877 ttgtcagttgagctaggacttctaga 1778852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 13951 - 14078
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||||| |||| ||||| | ||||| || |||||     
T  13951 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggt 14050  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  14051 atttgccagttgagctaggacttctaga 14078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 19631 - 19758
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||||||| |||| ||||| | ||||| || |||||     
T  19631 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggt 19730  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  19731 atttgccagttgagctaggacttctaga 19758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 9973 - 10100
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||| |||||||| ||||| |||| |||||| |||||||||| |||||||||| ||| |||||||| | ||||| || ||||||    
T  9973 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggc 10072  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  10073 atttgccagttgagctaggacttctaga 10100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 114380 - 114253
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccgg-tcacgacgtctgaccttgtaa-ttcggc 266  Q
    ||||||||| |||||||||  |||||||| ||||| |||| |||| |||||||||||| |||||||||||| ||| |||||| | ||||  || ||||||    
T  114380 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 114281  T
Q  267 atttaccagttaagttaggacttctaga 294  Q
    |||| |||||| || |||||||||||||    
T  114280 atttgccagttgagctaggacttctaga 114253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 34947 - 34822
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaatt-aaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtctgaccttgtaa-ttcgg 265  Q
    ||||||||| |||||||||| |||||||||| |||| |||||||||||| ||||||| |  |||||||||  ||||||||||| | ||||| || |||||    
T  34947 gtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaatttcgg 34848  T
Q  266 catttaccagttaagttaggacttct 291  Q
    ||||| |||||| || ||||||||||    
T  34847 catttgccagttgagctaggacttct 34822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 22291 - 22210
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaaccc-ggtcacgacgtc 249  Q
    ||||||||| |||||||||| |||||||||||||| ||||  |||||||||||||||| | |||||||| ||||||||||||    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtc 22210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 8943 - 9012
Alignment:
Q  169 gtcttagataaagtggtaattcactgaaattaaacccacatacaactgtgaggtcccgtgttcgaacccg 238  Q
    ||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||   |||||||||||    
T  8943 gtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccg 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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