View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2726_low_21 (Length: 308)

Name: NF2726_low_21
Description: NF2726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2726_low_21
NF2726_low_21
[»] chr7 (40 HSPs)
chr7 (17-303)||(42925638-42925925)
chr7 (17-251)||(24042185-24042419)
chr7 (26-257)||(47202416-47202647)
chr7 (17-254)||(28230465-28230701)
chr7 (17-275)||(19225595-19225854)
chr7 (17-303)||(3935987-3936270)
chr7 (26-257)||(31642963-31643194)
chr7 (21-257)||(3304759-3304996)
chr7 (17-251)||(36468534-36468766)
chr7 (28-198)||(37518303-37518473)
chr7 (26-199)||(8154879-8155052)
chr7 (22-198)||(36408352-36408528)
chr7 (26-257)||(36629126-36629358)
chr7 (68-240)||(43737063-43737234)
chr7 (26-185)||(33151200-33151361)
chr7 (21-257)||(33574044-33574276)
chr7 (17-185)||(31985514-31985685)
chr7 (34-257)||(6467618-6467843)
chr7 (17-131)||(9151844-9151958)
chr7 (124-308)||(42877149-42877332)
chr7 (17-128)||(42865099-42865210)
chr7 (17-186)||(36946288-36946458)
chr7 (17-87)||(1518799-1518869)
chr7 (21-193)||(7115271-7115444)
chr7 (163-257)||(28349227-28349321)
chr7 (17-82)||(5278361-5278426)
chr7 (22-87)||(6467142-6467207)
chr7 (23-79)||(24690337-24690393)
chr7 (17-74)||(43185887-43185944)
chr7 (128-187)||(48775574-48775633)
chr7 (155-308)||(9151692-9151838)
chr7 (21-187)||(16983743-16983908)
chr7 (109-193)||(26555130-26555214)
chr7 (159-251)||(28346076-28346167)
chr7 (104-187)||(37218189-37218272)
chr7 (21-184)||(39581733-39581899)
chr7 (22-68)||(19818491-19818537)
chr7 (159-193)||(28349192-28349226)
chr7 (21-87)||(48706000-48706066)
chr7 (22-82)||(1934201-1934261)
[»] chr3 (57 HSPs)
chr3 (17-308)||(3902803-3903097)
chr3 (17-257)||(50716174-50716414)
chr3 (17-257)||(50796433-50796673)
chr3 (17-299)||(501138-501418)
chr3 (17-303)||(35141954-35142236)
chr3 (17-295)||(51540611-51540890)
chr3 (17-308)||(38977745-38978038)
chr3 (17-191)||(34821340-34821514)
chr3 (17-254)||(3352063-3352301)
chr3 (26-254)||(47301944-47302173)
chr3 (17-246)||(47739929-47740158)
chr3 (17-254)||(28872928-28873167)
chr3 (26-255)||(2358628-2358858)
chr3 (17-253)||(51258329-51258565)
chr3 (17-198)||(33438503-33438683)
chr3 (27-303)||(39149683-39149961)
chr3 (21-257)||(3937310-3937537)
chr3 (26-254)||(52777166-52777384)
chr3 (17-257)||(49096224-49096463)
chr3 (37-198)||(46622801-46622963)
chr3 (96-257)||(48303913-48304074)
chr3 (26-169)||(43472975-43473118)
chr3 (29-254)||(30721813-30722044)
chr3 (122-246)||(45244322-45244446)
chr3 (17-87)||(29035890-29035961)
chr3 (136-302)||(34821512-34821676)
chr3 (17-87)||(45712081-45712151)
chr3 (22-107)||(27143418-27143503)
chr3 (17-65)||(47123140-47123188)
chr3 (182-257)||(42936591-42936666)
chr3 (134-193)||(42936686-42936745)
chr3 (17-79)||(43420127-43420189)
chr3 (17-83)||(47769358-47769424)
chr3 (17-78)||(26053518-26053579)
chr3 (26-138)||(29048383-29048496)
chr3 (155-303)||(47122984-47123130)
chr3 (155-303)||(47130350-47130496)
chr3 (17-65)||(47130506-47130554)
chr3 (17-87)||(512245-512315)
chr3 (22-76)||(5127901-5127955)
chr3 (17-87)||(29035806-29035876)
chr3 (21-108)||(26464897-26464984)
chr3 (212-253)||(33700683-33700724)
chr3 (35-87)||(512821-512873)
chr3 (134-193)||(33700775-33700835)
chr3 (189-257)||(43473119-43473186)
chr3 (234-308)||(12717171-12717243)
chr3 (20-79)||(14828919-14828978)
chr3 (212-254)||(8735096-8735138)
chr3 (212-254)||(9087337-9087379)
chr3 (49-83)||(11486649-11486683)
chr3 (26-107)||(54229903-54229985)
chr3 (17-82)||(33842071-33842136)
chr3 (22-87)||(34010091-34010156)
chr3 (21-82)||(40062476-40062537)
chr3 (30-87)||(51492891-51492948)
chr3 (17-77)||(47980003-47980063)
[»] chr5 (47 HSPs)
chr5 (17-308)||(15799060-15799349)
chr5 (17-303)||(6156571-6156855)
chr5 (17-257)||(33487494-33487734)
chr5 (17-257)||(4064717-4064957)
chr5 (26-249)||(26190304-26190527)
chr5 (17-303)||(38692780-38693066)
chr5 (17-254)||(38871558-38871795)
chr5 (17-262)||(39524655-39524900)
chr5 (17-256)||(20891497-20891737)
chr5 (17-308)||(40619987-40620279)
chr5 (17-257)||(25746911-25747149)
chr5 (22-254)||(15957637-15957868)
chr5 (17-246)||(28083375-28083604)
chr5 (17-198)||(38372252-38372433)
chr5 (17-185)||(31221336-31221504)
chr5 (17-171)||(29862582-29862736)
chr5 (17-257)||(24203681-24203917)
chr5 (17-254)||(27212595-27212833)
chr5 (96-257)||(26319002-26319162)
chr5 (17-262)||(37183778-37184024)
chr5 (17-303)||(31929121-31929386)
chr5 (14-185)||(26095047-26095219)
chr5 (127-251)||(37095022-37095144)
chr5 (17-193)||(32841968-32842145)
chr5 (128-254)||(12465214-12465337)
chr5 (96-257)||(34440628-34440778)
chr5 (92-187)||(14111851-14111946)
chr5 (30-100)||(7884234-7884304)
chr5 (96-257)||(36359662-36359823)
chr5 (17-143)||(13908545-13908672)
chr5 (21-87)||(1350311-1350377)
chr5 (17-81)||(27158144-27158208)
chr5 (17-87)||(12847497-12847567)
chr5 (20-87)||(40613675-40613742)
chr5 (91-193)||(8032219-8032321)
chr5 (122-257)||(38640604-38640741)
chr5 (17-82)||(8738982-8739047)
chr5 (21-184)||(18514757-18514922)
chr5 (249-308)||(23348361-23348420)
chr5 (249-303)||(20231053-20231107)
chr5 (17-56)||(16429157-16429196)
chr5 (212-254)||(1350456-1350498)
chr5 (135-193)||(34529976-34530034)
chr5 (21-79)||(41639494-41639552)
chr5 (24-77)||(6800931-6800984)
chr5 (228-257)||(38030770-38030799)
chr5 (17-61)||(14111947-14111991)
[»] chr4 (52 HSPs)
chr4 (17-303)||(19835405-19835690)
chr4 (17-257)||(55052616-55052856)
chr4 (33-303)||(29822503-29822773)
chr4 (17-303)||(38536056-38536340)
chr4 (22-303)||(7931546-7931822)
chr4 (17-303)||(25491392-25491676)
chr4 (21-257)||(32441741-32441976)
chr4 (17-276)||(40703574-40703834)
chr4 (17-304)||(48319061-48319345)
chr4 (17-262)||(17933134-17933379)
chr4 (26-253)||(6228819-6229044)
chr4 (21-257)||(49396938-49397174)
chr4 (26-253)||(23523840-23524068)
chr4 (17-198)||(46440271-46440452)
chr4 (26-257)||(34972804-34973025)
chr4 (17-257)||(3703246-3703487)
chr4 (89-257)||(25539017-25539185)
chr4 (17-253)||(6003670-6003906)
chr4 (17-193)||(25752441-25752617)
chr4 (17-148)||(31582419-31582550)
chr4 (43-263)||(54631485-54631706)
chr4 (17-151)||(2506028-2506162)
chr4 (17-192)||(8106387-8106563)
chr4 (17-170)||(41413095-41413249)
chr4 (137-308)||(53894108-53894277)
chr4 (17-87)||(7863541-7863611)
chr4 (17-107)||(41323089-41323180)
chr4 (17-80)||(53894022-53894085)
chr4 (21-107)||(37222040-37222127)
chr4 (213-308)||(31582555-31582648)
chr4 (103-251)||(38416501-38416649)
chr4 (22-77)||(14474213-14474268)
chr4 (195-254)||(41413250-41413309)
chr4 (225-303)||(35420740-35420818)
chr4 (27-77)||(38416937-38416987)
chr4 (140-257)||(50392529-50392647)
chr4 (46-138)||(346191-346283)
chr4 (26-78)||(27879657-27879709)
chr4 (17-60)||(25538976-25539019)
chr4 (25-100)||(32600927-32601002)
chr4 (17-82)||(372024-372089)
chr4 (27-75)||(27742121-27742169)
chr4 (17-84)||(53836215-53836282)
chr4 (21-87)||(18487665-18487731)
chr4 (17-74)||(47784101-47784159)
chr4 (68-134)||(52077016-52077082)
chr4 (17-58)||(25140503-25140544)
chr4 (17-82)||(25140712-25140777)
chr4 (29-82)||(42497885-42497938)
chr4 (21-82)||(47072085-47072146)
chr4 (27-83)||(49002861-49002917)
chr4 (225-285)||(53668756-53668816)
[»] chr8 (40 HSPs)
chr8 (17-262)||(3094598-3094847)
chr8 (17-308)||(8885450-8885738)
chr8 (17-257)||(44106145-44106385)
chr8 (17-257)||(37248480-37248720)
chr8 (17-303)||(42280888-42281175)
chr8 (26-244)||(31519898-31520116)
chr8 (17-198)||(27927938-27928119)
chr8 (17-252)||(16310526-16310761)
chr8 (17-303)||(34853204-34853490)
chr8 (26-257)||(21004312-21004537)
chr8 (17-286)||(9073397-9073666)
chr8 (17-166)||(40994805-40994954)
chr8 (17-303)||(28916655-28916937)
chr8 (17-125)||(14164054-14164162)
chr8 (17-187)||(40392526-40392698)
chr8 (17-171)||(4259632-4259788)
chr8 (23-193)||(17119882-17120053)
chr8 (122-257)||(36404257-36404391)
chr8 (122-257)||(7971099-7971234)
chr8 (22-82)||(36165840-36165900)
chr8 (122-253)||(41530595-41530727)
chr8 (23-77)||(28423523-28423577)
chr8 (109-193)||(35676627-35676711)
chr8 (27-82)||(39093605-39093660)
chr8 (17-87)||(11698313-11698383)
chr8 (22-75)||(7981618-7981671)
chr8 (116-185)||(11698382-11698451)
chr8 (219-303)||(27928298-27928380)
chr8 (17-87)||(36317884-36317958)
chr8 (27-79)||(7982478-7982530)
chr8 (212-303)||(40994696-40994786)
chr8 (22-87)||(1374032-1374097)
chr8 (17-82)||(9845490-9845555)
chr8 (251-303)||(773038-773090)
chr8 (225-303)||(5196057-5196133)
chr8 (21-80)||(32504304-32504363)
chr8 (17-59)||(36980689-36980731)
chr8 (17-82)||(10833512-10833577)
chr8 (17-78)||(33472379-33472440)
chr8 (23-72)||(40328004-40328053)
[»] scaffold0137 (1 HSPs)
scaffold0137 (17-279)||(9494-9756)
[»] chr1 (37 HSPs)
chr1 (22-257)||(34162724-34162959)
chr1 (17-308)||(42545840-42546129)
chr1 (26-254)||(18583550-18583778)
chr1 (17-308)||(32817608-32817896)
chr1 (26-253)||(33611416-33611643)
chr1 (17-279)||(41584662-41584929)
chr1 (17-254)||(17000304-17000540)
chr1 (17-301)||(40650672-40650958)
chr1 (26-257)||(23442660-23442891)
chr1 (17-304)||(49677368-49677645)
chr1 (17-308)||(40907931-40908224)
chr1 (26-257)||(49786191-49786421)
chr1 (17-257)||(32542328-32542555)
chr1 (17-193)||(44573094-44573269)
chr1 (17-187)||(15069838-15070009)
chr1 (17-198)||(45046847-45047028)
chr1 (36-303)||(38885117-38885370)
chr1 (17-193)||(7011195-7011372)
chr1 (22-193)||(28866632-28866803)
chr1 (96-257)||(30829542-30829692)
chr1 (17-254)||(6223743-6223972)
chr1 (17-286)||(45567887-45568143)
chr1 (17-107)||(52744840-52744930)
chr1 (17-192)||(34006246-34006422)
chr1 (103-253)||(43319279-43319429)
chr1 (110-257)||(24471405-24471541)
chr1 (17-185)||(24472824-24472995)
chr1 (130-254)||(27794780-27794903)
chr1 (26-186)||(26723494-26723649)
chr1 (17-106)||(27794904-27794993)
chr1 (134-286)||(52744931-52745083)
chr1 (235-308)||(45907378-45907451)
chr1 (22-82)||(3561337-3561397)
chr1 (22-80)||(26230150-26230208)
chr1 (21-82)||(890611-890672)
chr1 (96-187)||(800878-800969)
chr1 (46-87)||(5210305-5210346)
[»] chr6 (23 HSPs)
chr6 (17-257)||(23406718-23406958)
chr6 (17-257)||(5699480-5699727)
chr6 (25-298)||(17264292-17264564)
chr6 (17-257)||(2813222-2813463)
chr6 (17-303)||(14587557-14587841)
chr6 (17-257)||(4508299-4508539)
chr6 (26-254)||(32035038-32035261)
chr6 (17-257)||(3717280-3717520)
chr6 (72-303)||(7412704-7412934)
chr6 (17-254)||(1945527-1945764)
chr6 (75-257)||(33413402-33413583)
chr6 (28-254)||(24604369-24604597)
chr6 (27-257)||(5638801-5639014)
chr6 (17-135)||(2539495-2539613)
chr6 (26-82)||(29519376-29519432)
chr6 (17-193)||(9905104-9905276)
chr6 (22-87)||(29289627-29289692)
chr6 (74-308)||(21517535-21517764)
chr6 (28-87)||(7734334-7734393)
chr6 (17-87)||(13801024-13801094)
chr6 (17-68)||(34528551-34528602)
chr6 (21-87)||(14037963-14038029)
chr6 (17-74)||(236899-236956)
[»] chr2 (32 HSPs)
chr2 (17-303)||(45153783-45154070)
chr2 (26-257)||(36948946-36949177)
chr2 (17-303)||(32187861-32188146)
chr2 (25-303)||(44465727-44466004)
chr2 (17-286)||(17474791-17475062)
chr2 (30-303)||(41854904-41855167)
chr2 (17-276)||(33452435-33452694)
chr2 (17-303)||(39447034-39447324)
chr2 (17-254)||(15995105-15995343)
chr2 (26-246)||(41510429-41510650)
chr2 (17-187)||(36874977-36875147)
chr2 (17-187)||(42894369-42894539)
chr2 (68-253)||(25217834-25218018)
chr2 (17-254)||(34517026-34517263)
chr2 (17-250)||(5507345-5507581)
chr2 (75-193)||(4268288-4268406)
chr2 (17-193)||(41203178-41203354)
chr2 (17-186)||(38066665-38066834)
chr2 (122-257)||(9847522-9847657)
chr2 (29-82)||(41204029-41204082)
chr2 (96-187)||(33366920-33367010)
chr2 (122-257)||(25715285-25715422)
chr2 (23-87)||(8388743-8388807)
chr2 (17-65)||(25217767-25217815)
chr2 (249-308)||(27640537-27640595)
chr2 (21-68)||(34817212-34817259)
chr2 (17-82)||(16750420-16750484)
chr2 (17-82)||(17766821-17766886)
chr2 (44-77)||(45293743-45293776)
chr2 (21-77)||(27900610-27900666)
chr2 (26-62)||(33440510-33440546)
chr2 (17-49)||(34519529-34519561)
[»] scaffold0027 (1 HSPs)
scaffold0027 (17-303)||(141960-142245)
[»] scaffold0508 (1 HSPs)
scaffold0508 (17-193)||(3392-3568)
[»] scaffold0182 (2 HSPs)
scaffold0182 (93-303)||(22996-23208)
scaffold0182 (17-54)||(23227-23264)
[»] scaffold0210 (1 HSPs)
scaffold0210 (225-303)||(8637-8713)
[»] scaffold0010 (1 HSPs)
scaffold0010 (175-299)||(140489-140612)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-78)||(59967-60028)
[»] scaffold0564 (1 HSPs)
scaffold0564 (17-79)||(4471-4533)
[»] scaffold0466 (1 HSPs)
scaffold0466 (22-87)||(8786-8851)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 42925638 - 42925925
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  42925638 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcgtattatataatccgaactgttttaccttgaaaaaaggtgtttagggggtt 42925737  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||||||||||||||||| || | |||||||||||||||| |||||||||||||| ||||||| ||||| ||||||| || |||||    
T  42925738 tccggattatgtaatccgaaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatcaggaaaaacccgtaactccatttttcaccct 42925837  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaag-aaaaaatagggcgcgcgaggaaa 303  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| || |||||| ||| |||||||||||| ||||||||||    
T  42925838 ataacaaaggaaaacaccattccggattatgaaatccggaatgctccgagggtaattttgaaagaaaaaaatagggcacgcgaggaaa 42925925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 24042185 - 24042419
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  24042185 atgactatcaatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaatggtgtttagggggtt 24042284  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||    
T  24042285 tccggattatgtaatccggaaacatcatgtaacgcgccttattttttgaagtttccggattacaaaatccggaaaaacccgtaactccatttttcaccct 24042384  T
Q  217 ataacaaagaaaaacaccattccggattatgaaat 251  Q
    ||| ||||| |||||||||||||| ||||||||||    
T  24042385 atatcaaaggaaaacaccattccgaattatgaaat 24042419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 47202647 - 47202416
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || |||||| ||||| |||||| |||||||||||| ||||    
T  47202647 catgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttaccttaaaaaagggtgtttagggggtttccggatta 47202548  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||     
T  47202547 tgtaatccggaaacatcatgtaacgcgccctattttttgaagttttcggattacaaaatctggaaaaatccgtaactccatttttcaccctataacaaaa 47202448  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||||||||||||||||||||||||||    
T  47202447 gaaaacaccattccggattatgaaatccggaa 47202416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 28230465 - 28230701
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  28230465 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 28230564  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||| ||||  || |||| ||||||||    
T  28230565 tccggattatgtaatccggaaacatcaagtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatccgttact-cattttttaccct 28230663  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccg 254  Q
     |||||||  |||||||||||| ||||||| |||||||    
T  28230664 ttaacaaaagaaaacaccattctggattataaaatccg 28230701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 19225595 - 19225854
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| || ||||||||| |||||| ||||| ||    
T  19225595 atgaatatccatgttacaaacatgtttagaatttgtgctgataccgttcagattatataatccgaattgttttatcttgaaaaatggtgtttaggggatt 19225694  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaag-ccgtagctccattctttaccc 215  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  ||||  |||  || || ||||    
T  19225695 tccggattatgtaatccggaaacatcatgtaacgcaccctattttttgaagtttttggattacaaaatccggaaaaaatccgttactcattttttcaccc 19225794  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgatttt 275  Q
    | |||||||  |||||| |||| || |||||  |||| |||||||||||||||| |||||    
T  19225795 tttaacaaaagaaaacatcatttcgaattatataatctggaatgctctgagagtaatttt 19225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 3936270 - 3935987
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||||||||||||||||||||||||||| |||||||| | ||||| ||| ||||||||||| || | |||| |||||||||||| |||||| ||||||||    
T  3936270 atgattatccatgttacaaacatgtttacaatttgtgctaatacatttcggattatataattcggactgttttaccttgaaaaagggtgtttagggggtt 3936171  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |  | ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||  |||  || || || ||    
T  3936170 tttggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgttactcattttttcactct 3936071  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| |||||||||||||  |||||||||||||| ||| || ||||||   ||||||||||||| || |||||||    
T  3936070 ttaacaaaagaaaacatcattccggattatataatccggaatgctccgagggtaattttg---gaaaaaatagggcacgtgaggaaa 3935987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 31643194 - 31642963
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||| ||| |||||||| |||| || |||| ||||||||||||||||||||||| | || |||||| ||||| ||||||  ||||||||||| ||||    
T  31643194 catgttaaaaatatgtttaggatttatgctgatccagttcagattatataatccgaactattttaccttaaaaaagggtgtttggggggtttccggatta 31643095  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||| |  ||||||| |||| |||||| ||||| ||||||| || |||||||||||||     
T  31643094 tgtaatccggaaacatcatgtaacacaccctattttttgaagtttccaaattacaagatccagaaaaatccgtaactccatttttcaccctataacaaac 31642995  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     ||||||||||||| |||||||||||||||||    
T  31642994 gaaaacaccattccagattatgaaatccggaa 31642963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 21 - 257
Target Start/End: Original strand, 3304759 - 3304996
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccg 120  Q
    |||| ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || ||||||  |||| ||||||  ||||||||  |    
T  3304759 ttatacatgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttaccttagaaaagggtgtttggggggtttttg 3304858  T
Q  121 aattatgtaatccgaaaacatcatgtaacgcacactatttt-ttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctata 219  Q
     ||||||||||||| ||| |||||||||| ||| ||||||| |||||||||  ||||||||||||||||||||| ||||| ||||||| || ||||||||    
T  3304859 gattatgtaatccggaaatatcatgtaacacaccctatttttttgaagtttctggattacaaaatccggaaaaatccgtaactccatttttcaccctata 3304958  T
Q  220 acaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||| |||||||||||||  ||||||||||||||||    
T  3304959 acaaaggaaaacaccattccaaattatgaaatccggaa 3304996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 36468534 - 36468766
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | || |||| |||||||||||| |||||| ||||||||    
T  36468534 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcaaactgttttaccttgaaaaagggtgtttagggggtt 36468633  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||| | |||||||||||||| | | |||||||||||||||| |  ||||||||||||||||||| ||||  || |||| |||  |||    
T  36468634 tccggattatgtaatctg-aaacatcatgtaacacgccctattttttgaagtttccatattacaaaatccggaaaaatccgttact-cattttttcacct 36468731  T
Q  217 ataacaaagaaaaacaccattccggattatgaaat 251  Q
     |||||||  |||||| ||||||| ||||| ||||    
T  36468732 ttaacaaaagaaaacatcattccgaattataaaat 36468766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 37518303 - 37518473
Alignment:
Q  28 tgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatg 127  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| |||||||||||| ||||||    
T  37518303 tgttacaaacatgtttagaatttatgctgatacagttcggattatataatccgaactgttttaccttgaaaaatggtgtttagggggtttccggattatg 37518402  T
Q  128 taatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    ||||||| |||| ||||||||| | | ||||||||||||||||  |||||| |||||||||||||| ||||    
T  37518403 taatccggaaacttcatgtaacacgccctattttttgaagtttctggattataaaatccggaaaaatccgt 37518473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 8155052 - 8154879
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||| |||| ||||||||||||||||| | || |||||| ||||| |||||| ||||||||| || ||||    
T  8155052 catgttacaaatatgtttaggatttgtgctgatagagtttagattatataatccgaactattttaccttaaaaaagggtgtttagggggttttcggatta 8154953  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgta 199  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| |||||    
T  8154952 tgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatccgta 8154879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 36408528 - 36408352
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccga 121  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||| |||||||||| | |||||| | | ||||||||     
T  36408528 tatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgttttaccttgaaagatggtgtttatgaggtttccgg 36408429  T
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    ||||||||||||| |||||||||||| ||| |  |||||||||||||||  ||||||||||||||||||||| ||||    
T  36408428 attatgtaatccggaaacatcatgtatcgcgccttattttttgaagtttctggattacaaaatccggaaaaatccgt 36408352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 36629358 - 36629126
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||| ||||||||||||| |||||| | ||||||||||| |||||||||||||||| |||| |||||| ||||| |||||| || ||||||||  ||||    
T  36629358 catgtaacaaacatgtttaaaatttgcgctgatacagttcggattatataatccgaactgttttaccttaaaaaatggtgtttagagggtttccagatta 36629259  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataac-aaa 224  Q
    ||||||||| |||||||||||||||| | ||||||||| |||||  | |||||||||||||||||||| ||||  |||  || || ||||| |||| |||    
T  36629258 tgtaatccggaaacatcatgtaacgcgccctatttttttaagttaccagattacaaaatccggaaaaatccgttactcattttttcaccctctaacaaaa 36629159  T
Q  225 gaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||||||||||||  ||||| ||||||||||    
T  36629158 gaaaaacaccattccatattataaaatccggaa 36629126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 68 - 240
Target Start/End: Complemental strand, 43737234 - 43737063
Alignment:
Q  68 attatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaag 167  Q
    ||||||||||||||| | || |||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  43737234 attatataatccgaactattttacctt-aaaaagggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaag 43737136  T
Q  168 ttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccg 240  Q
    ||| |||||||||||||||||||||| ||||  |||  || || ||||| |||||||  ||||||||||||||    
T  43737135 tttccggattacaaaatccggaaaaatccgttactcattttttcaccctttaacaaaagaaaacaccattccg 43737063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 33151361 - 33151200
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacg-gtgttcagggggtttccgaatt 124  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||| |||||| ||||| | ||||| ||||| |||||| |||    
T  33151361 catgttacaaacatgtttagaatttgtgctgatacagttcgaattatataatccgaactgttttaccttaaaaaatgagtgtttaggggatttccggatt 33151262  T
Q  125 atgtaatccgaaaacatcatgtaacgcacacta-ttttttgaagttttcggattacaaaatc 185  Q
    |||||||||||| ||||||| ||| || | ||| |||||| |||||| || |||||||||||    
T  33151261 atgtaatccgaagacatcatataatgcgccctattttttttaagtttccgaattacaaaatc 33151200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 257
Target Start/End: Original strand, 33574044 - 33574276
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccg 120  Q
    |||| ||||||||||| |||||||  ||||||| | ||||||||||||||||||||| |||| | || |||||| ||||| ||         ||||| ||    
T  33574044 ttatacatgttacaaatatgtttatgatttgtgctcatacagttcagattatataattcgaactattttaccttaaaaaatgg---------ggttttcg 33574134  T
Q  121 aattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctat-- 218  Q
     |||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||  ||||| || || || |||| || || ||||      
T  33574135 gattatgtaatccgaaaacatcatgtaacgcaccctattttttaaagtttccggattacaaaatccaaaaaaatccataacttcatttttcactctataa 33574234  T
Q  219 ---aacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
       ||||||| |||||||||| ||||||||||||| ||||||    
T  33574235 caaaacaaaggaaaacaccatcccggattatgaaacccggaa 33574276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 31985514 - 31985685
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggt 115  Q
    |||| ||| ||||||| ||| ||||||| ||||||||||||||||||||  ||||||||||||||| ||||   || |||||||| |||||| | |||||    
T  31985514 atgactattcatgttaaaaatatgtttaaaatttgtgttgatacagttcgaattatataatccgaactgtttcccccttgaaaaatggtgtttaaggggt 31985613  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacacta--ttttttgaagttttcggattacaaaatc 185  Q
     | |||||||||||||||||||| |||||||||||| | |||  |||||||| |||||||||||||||||||    
T  31985614 gttcgaattatgtaatccgaaaaaatcatgtaacgcgccctattttttttgaggttttcggattacaaaatc 31985685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 34 - 257
Target Start/End: Complemental strand, 6467843 - 6467618
Alignment:
Q  34 aaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggtttccgaattatgtaatc 132  Q
    ||||||||||| ||||| || ||||||||||| |||||||||||||||| |||| | || |||||||| |||||| ||||||| | || |||||||||||    
T  6467843 aaacatgtttaaaatttatgctgatacagttcggattatataatccgaactgtttttcccttgaaaaagggtgtttagggggtgttcggattatgtaatc 6467744  T
Q  133 cgaaaacatcatgtaacgcacactattttttgaagttttcgga--ttacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaa 230  Q
    |||| | |||||||||| ||| |||||||||||  |||  |||  ||||| ||| |||||||| ||||| || |||| || ||| | |||||||| ||||    
T  6467743 cgaacaaatcatgtaacacaccctattttttgagatttctggattttacataattcggaaaaatccgtaact-catttttcaccatttaacaaaggaaaa 6467645  T
Q  231 caccattccggattatgaaatccggaa 257  Q
    |||||||||| || || ||||||||||    
T  6467644 caccattccgaatcataaaatccggaa 6467618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 9151958 - 9151844
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | | |||| |||||||||||| | |||| ||||||||    
T  9151958 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatctggactgttttaccttgaaaaaggatgtttagggggtt 9151859  T
Q  117 tccgaattatgtaat 131  Q
    |||| ||||||||||    
T  9151858 tccggattatgtaat 9151844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 124 - 308
Target Start/End: Original strand, 42877149 - 42877332
Alignment:
Q  124 tatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaa 223  Q
    ||||||||||| |||||| ||||||||| | |||||||||  | ||| | ||||||||||||||||||||  |||  |||  || || ||||| ||||||    
T  42877149 tatgtaatccggaaacattatgtaacgcgccctattttttttattttcccgattacaaaatccggaaaaacacgttactcattttttcaccctttaacaa 42877248  T
Q  224 agaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    |  |||||| |||||||||||||  |||||||||||||||||| ||  |||||||| ||||||||||||||||||||||| ||||    
T  42877249 aagaaaacatcattccggattatataatccggaatgctctgagggtacttttggaa-aaaaaatagggcgcgcgaggaaaggcat 42877332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 42865099 - 42865210
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| | |||| |||||||||||  |||||| ||||||||    
T  42865099 atgactatccatgttacaaacatatttagaatttgtgctgatacagttcggattatataatccggactgttttaccttgaaaaggggtgtttagggggtt 42865198  T
Q  117 tccgaattatgt 128  Q
    |||| |||||||    
T  42865199 tccggattatgt 42865210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 36946288 - 36946458
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||||||| |||||||||||||| || |||||||||| ||||||||||| | |||||||||||||| || || | |||||||||| |||||| |   |||    
T  36946288 atgattattcatgttacaaacatattcagaatttgtgctgatacagttcgggttatataatccgaattgtttttcccttgaaaaaaggtgtttaaatggt 36946387  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatcc 186  Q
     |  | ||| | |||||| |||| || | ||||||||| ||||||||||| |||||||||||| |||||||    
T  36946388 gtttggattttataatccaaaaaaattaagtaacgcactctattttttgaggttttcggattataaaatcc 36946458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 1518869 - 1518799
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||    
T  1518869 atgattatcgatgttacaaacatgtttataatttgtgctgatacagttcggattatataatccgaactgtt 1518799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 7115271 - 7115444
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacct-tgaaaaacggtgttcagggggtttcc 119  Q
    |||||||||||| |||||   | | ||||||||||||||| || |  ||||||||||||||| |||| | ||  | ||||| |||||| ||||||||| |    
T  7115271 ttatccatgttagaaacaaactcaaaatttgtgttgatacggtccgaattatataatccgaattgtttttccccttaaaaatggtgtttagggggttttc 7115370  T
Q  120 gaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
      ||||| |||| |||||| |||| ||||||||| ||||||||||| || ||||||||| | |||||| |||||    
T  7115371 agattatataattcgaaaaaatcaagtaacgcaccctattttttgaggtcttcggattatataatccgaaaaaa 7115444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 28349227 - 28349321
Alignment:
Q  163 tgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||||||||||||||||||| | ||||||  |||| |||  || || ||| | |||||||||||||||||||| | |||||||||||||||||    
T  28349227 tgaagttttcggattacaaaattcagaaaaattcgtaactcattttttcaccatttaacaaagaaaaacaccatttccgattatgaaatccggaa 28349321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 5278426 - 5278361
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||||||||||||||||| | ||||| || | ||||||||||||||||||||||||||    
T  5278426 atgactatccatgttacaaacatgttcaaaatttatgctaatacagttcagattatataatccgaa 5278361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 6467142 - 6467207
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||||    
T  6467142 tatccatattacaaacatgtttagaacttgtgttgatatagttcggattatataatctgaattgtt 6467207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 24690337 - 24690393
Alignment:
Q  23 atccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatcc 79  Q
    |||||||||||||||||| ||| ||||| || |||||||||||||||||||||||||    
T  24690337 atccatgttacaaacatgcttaaaatttatgctgatacagttcagattatataatcc 24690393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 43185944 - 43185887
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatat 74  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||  ||||||||    
T  43185944 atgattatccatgttataaacatgtttaaaatttgtgctgatacagtttggattatat 43185887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 48775633 - 48775574
Alignment:
Q  128 taatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    |||||||||||||||| |||| |||| ||||||||||| ||||||| |||| ||||||||    
T  48775633 taatccgaaaacatcaagtaatgcaccctattttttgaggttttcgaattataaaatccg 48775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 308
Target Start/End: Complemental strand, 9151838 - 9151692
Alignment:
Q  155 ctattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||||||||| |||||||||||||||||||||| | ||  |||  || || ||||| ||       |||||| |||||||||||||  ||||||    
T  9151838 ctattttttgaagtttccggattacaaaatccggaaaaacctgttactcattttttcaccctttac------aaaacatcattccggattatataatccg 9151745  T
Q  255 gaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    |||||||  ||| || ||||| ||| ||||||||| ||| ||||||||| ||||    
T  9151744 gaatgcttcgagggtaatttt-gaaaaaaaaatagagcgtgcgaggaaaggcat 9151692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 16983743 - 16983908
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggtttcc 119  Q
    ||||||||||||||||||     | |||||||| ||||||| |||||||||||||||||||| || || | || ||||||| |||||| | || |||  |    
T  16983743 ttatccatgttacaaacagacccaaaatttgtgctgatacaattcagattatataatccgaactgttttttccctgaaaaatggtgtttatggtgtt--c 16983840  T
Q  120 gaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    | ||| | ||||  ||||| | || | ||| ||||||||||||||| ||||| |||||| ||||||||    
T  16983841 ggattctataatttgaaaaaaacaaggaacacacactattttttgaggtttttggattataaaatccg 16983908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 26555130 - 26555214
Alignment:
Q  109 agggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    ||||||| | || |||| ||||||| |||| |||||||||||| | ||||||||||   | |||||||||||||||||| |||||    
T  26555130 agggggtgttcggattaggtaatccaaaaaaatcatgtaacgcgccctattttttgtgatattcggattacaaaatccgaaaaaa 26555214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 28346167 - 28346076
Alignment:
Q  159 tttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaat 251  Q
    ||||||||||||  |||||||||||| |||||| | ||||| ||| ||| ||| | || |||||||| |||||| |||||| |||||||||||    
T  28346167 tttttgaagtttctggattacaaaattcggaaacatccgtaactc-atttttttctctttaacaaaggaaaacatcattccagattatgaaat 28346076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 37218189 - 37218272
Alignment:
Q  104 tgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    |||||||||||| | |  ||||| ||||||||||| |||| | || |  | |||||||||||||||||||||||| ||||||||    
T  37218189 tgttcagggggtgttcatattatataatccgaaaaaatcaaggaatgtgccctattttttgaagttttcggattataaaatccg 37218272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 39581899 - 39581733
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgt--tgatacagttcagattatataatccgaaat-gttgtaccttgaaaaacggtgttcagggggttt 117  Q
    |||| |||||||||||||   ||| |||||||||  ||||||||||| |||||||||||| ||| |  || | |||||||||| |||||| | ||||| |    
T  39581899 ttattcatgttacaaacaaacttataatttgtgtgctgatacagttcggattatataatctgaattatttctcccttgaaaaagggtgtttatggggtgt 39581800  T
Q  118 ccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaat 184  Q
      ||||| | ||||||||||| | || |||||||    |||||||| | |||||||||||| |||||    
T  39581799 ttgaattctataatccgaaaatagcaagtaacgcgtcttattttttaaggttttcggattataaaat 39581733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 19818537 - 19818491
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcaga 68  Q
    |||||||||||||| ||||||||| ||||||| ||||| ||||||||    
T  19818537 tatccatgttacaagcatgtttaggatttgtgctgatagagttcaga 19818491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 28349192 - 28349226
Alignment:
Q  159 tttttgaagttttcggattacaaaatccggaaaaa 193  Q
    ||||||||||||||| |||||||||||||||||||    
T  28349192 tttttgaagttttcgaattacaaaatccggaaaaa 28349226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 48706000 - 48706066
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||| ||||| ||| | | ||||||| |||| |||||||||||||||||||||| ||||| ||||    
T  48706000 ttatccgtgttaaaaataggcttagaatctgtgctgatacagttcagattatataaaccgaattgtt 48706066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 1934201 - 1934261
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||| ||||||||| || |||||||||| | || ||||||| |||||||||||||||    
T  1934201 tatcaatgctacaaacatattcagaatttgtgcttatccagttcaaattatataatccgaa 1934261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 3902803 - 3903097
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  3902803 atgatcatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 3902902  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | ||| ||||| | || |||||    
T  3902903 tccggattatgtaatccaaaaacatcatgtaacgcgctctattttttgaagttttcggattacaaaatccggaaaaaccagtaactccacttttcaccct 3903002  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaag---aaaaaatagggcgcgcgaggaaatgcat 308  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |  ||| || ||||||||||   |||||||||||||| |||||||| ||||    
T  3903003 ataacaaaggaaaacaccattccggattatgaaatccggaatgattcgagggtaattttggaagaaaaaaaaatagggcgcacgaggaaaggcat 3903097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 50716414 - 50716174
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  50716414 atgactattcatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaattgttttaccttgaaaaagggtgtttagggggtt 50716315  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||| | |||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| || |||||    
T  50716314 tccggattatgtaatctggaaacatcatgtaacacgccctattttttgaagttttcggattacaaaatccgaaaaaacccgtaactccatttttcaccct 50716215  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||||||| |||| |||||||||||||||||||| |||||    
T  50716214 ataacaaaggaaaataccattccggattatgaaattcggaa 50716174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 50796433 - 50796673
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  50796433 atgactattcatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaattgttttaccttgaaaaagggtgtttagggggtt 50796532  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||| | |||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| || |||||    
T  50796533 tccggattatgtaatctggaaacatcatgtaacacgccctattttttgaagttttcggattacaaaatccgaaaaaacccgtaactccatttttcaccct 50796632  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||||||| |||| |||||||||||||||||||| |||||    
T  50796633 ataacaaaggaaaataccattccggattatgaaattcggaa 50796673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 501138 - 501418
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||| ||| |||| |||||||||||| |||||| ||||||||    
T  501138 atgactatccattttacaaacatgtttagaatttgtgcttatacagttcggattatataatc-gaactgttttaccttgaaaaaaggtgtttagggggtt 501236  T
Q  117 t-ccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
    | ||| |||||| |||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||  | || ||||||| ||  |||    
T  501237 ttccggattatgcaatccggaaacatcatgtaacgcgccctattttttgaagtttttggattacaaaatccggaaaaactcataactccatttttcgccc 501336  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgag 299  Q
    |||||||||| |||||||||||| ||| ||||||||||| ||||||| ||| || ||||||  |||||||||||||||||||||    
T  501337 tataacaaaggaaaacaccattcaggaatatgaaatccgaaatgctccgagggtaattttg--agaaaaaatagggcgcgcgag 501418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 35142236 - 35141954
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||| |||||| ||||| |||||| ||||||||    
T  35142236 atgactatccatgttacaaacatgtttagaatttgtgctgatacaattcatattatataatccgaactgttttaccttaaaaaatggtgtttagggggtt 35142137  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | ||| |||||||||||| |||||||||||| ||||||||| ||||   | | || || |||||    
T  35142136 tccggattatgtaatccggaaacatcatgtaacgcgccctaatttttgaagtttccggattacaaaacccggaaaaatccgt---tacttttttcaccct 35142040  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  | ||||||||||||||||||  |||||||||||||| ||| || ||||||||| |||||||| ||||||||||||||    
T  35142039 ttaacaaaagataacaccattccggattatataatccggaatgctccgagggtaattttggaa-aaaaaataaggcgcgcgaggaaa 35141954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 51540611 - 51540890
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||    
T  51540611 atgactatccaagttacaaacatgtttagaatttgtgctgatactattcagattatataatccgaactgttttaccttgaaaaacggtgtttaaggggtt 51540710  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt--acc 214  Q
    |||| |||||||||| || |||||||||||||||| | |||||||||||||||| |||||| |||||||| |||||| ||||  |||  || |||  |||    
T  51540711 tccggattatgtaattcggaaacatcatgtaacgcgccctattttttgaagtttccggattccaaaatccagaaaaatccgttactcattttttttcacc 51540810  T
Q  215 ctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcg 295  Q
    || |||||||  ||||||||||| |||||||| ||||| ||||||||| ||| || ||||||||| |||||||||||||||    
T  51540811 ctttaacaaaagaaaacaccatttcggattataaaatctggaatgctccgagggtaattttggaa-aaaaaatagggcgcg 51540890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 38977745 - 38978038
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||  ||| |||| |||||||||||| |||||| ||||||||    
T  38977745 atgactatccatgttacaaacatgtttataatttgtgctgatacagttcggattatataatttgaactgttttaccttgaaaaaaggtgtttagggggtt 38977844  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    | || |||||||||||| |||||| |||||||||| | |||||||||||||||| ||||||||||||||  |||||| ||||  ||   || || |||||    
T  38977845 ttcggattatgtaatcccaaaacaccatgtaacgcgccctattttttgaagtttccggattacaaaatctagaaaaatccgttacttattttttcaccct 38977944  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaag--aaaaaatagggcgcgcgaggaaatgcat 308  Q
     |||||||  ||||||||||||| ||||||  ||||||||||||||  || || |||| |||||  ||||||||||||||||||||||| ||||    
T  38977945 ttaacaaaataaaacaccattccagattatataatccggaatgctccaagggtaatttgggaagaaaaaaaatagggcgcgcgaggaaaggcat 38978038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 34821340 - 34821514
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||| |||||| ||||||||    
T  34821340 atgactatctatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactattttaccttgaaaaatggtgtttagggggtt 34821439  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaa 191  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| ||||||    
T  34821440 tccggattatgtaatccgaaaacatcatgtaacgcgctctattttttgaagtttccggattacaaaattcggaaa 34821514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 3352063 - 3352301
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||||| ||| |||||| ||||||||    
T  3352063 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataattcgaactgttttaccttgataaagggtgtttagggggtt 3352162  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accc 215  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| |||||| | |||||||||||  |||||||  |||  |||  || ||| ||||    
T  3352163 tccgaattatgtaatccggaaacatcatgtaacgcaccctatttttttaagtttcctgattacaaaatttggaaaaattcgttactcatttttttcaccc 3352262  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    | ||||||| ||||||| ||||  ||||||| |||||||    
T  3352263 tttaacaaaaaaaaacatcattttggattataaaatccg 3352301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 47302173 - 47301944
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacgg-tgttcagggggtttccgaatt 124  Q
    ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || |||||| ||||| || |||| ||| ||||| || |||    
T  47302173 catgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttaccttaaaaaaagggtgtttaggaggttttcggatt 47302074  T
Q  125 atgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaa 224  Q
    |||||||||| |||||||||||||||| |  |||||||| |||||| |||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  47302073 atgtaatccggaaacatcatgtaacgcgccttatttttttaagtttccggattacaaaatccggaaaaatccataactccatttttcaccctataacaaa 47301974  T
Q  225 gaaaaacaccattccggattatgaaatccg 254  Q
    | |||||||||||||| |||||||||||||    
T  47301973 ggaaaacaccattccgaattatgaaatccg 47301944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 47739929 - 47740158
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||   || |||||||||||| |||||| ||||||||    
T  47739929 atgactatctatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatcaaaacaattttaccttgaaaaagggtgtttagggggtt 47740028  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||| | || ||||  || || |||||    
T  47740029 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctggaaaaatctgttgctcattttttcaccct 47740128  T
Q  217 ataacaaagaaaaacaccattccggattat 246  Q
     |||||||  |||||| |||||||||||||    
T  47740129 ttaacaaaagaaaacatcattccggattat 47740158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 28873167 - 28872928
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaac--ggtgttcaggggg 114  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||   |||||| ||||||    
T  28873167 atgactatctatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttaccttaaaaaaaagggtgtttaggggg 28873068  T
Q  115 tttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttacc 214  Q
    ||   | ||||||||||||| |||||| |||||||||   |||||||||||| ||||||||||| ||||||| ||||||  |||| || |||| || |||    
T  28873067 ttgttggattatgtaatccggaaacataatgtaacgcgtcctattttttgaaattttcggattataaaatccagaaaaactcgtaacttcatttttcacc 28872968  T
Q  215 ctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  28872967 ctataacaaagaaaaacatcattccagattatgaaatccg 28872928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 255
Target Start/End: Original strand, 2358628 - 2358858
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| |||| || ||||||||||| |||||||||||||||| | || |||||| ||||| ||||||  | ||||||||| ||||    
T  2358628 catgttacaaatatgtttaggatttatgctgatacagttcggattatataatccgaactattttaccttaaaaaagggtgtttggagggtttccggatta 2358727  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactatttt-ttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaa 224  Q
    ||||| ||| |||||||||||||| | | ||||||| ||||||||| ||||||||||||||| | |||| ||||| ||||||| || |||||||||||||    
T  2358728 tgtaagccggaaacatcatgtaacacgccctatttttttgaagtttccggattacaaaatccaggaaaatccgtaactccatttttcaccctataacaaa 2358827  T
Q  225 gaaaaacaccattccggattatgaaatccgg 255  Q
    | |||||||||||||||||||||||||||||    
T  2358828 ggaaaacaccattccggattatgaaatccgg 2358858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 51258565 - 51258329
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggt 115  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||| | || |||| | || |||||||| |||||| |||||||    
T  51258565 atgactatccatgttataaacatgtttaaaatttgtgctgatacagttcggattatataattcaaattgtttttcccttgaaaaatggtgtttagggggt 51258466  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
     | || ||||||||||||||||| || ||||||||| | |||||||||||| |||  ||||||||||||||||||||| ||||| || |||| || ||||    
T  51258465 gttcggattatgtaatccgaaaaaattatgtaacgcgccctattttttgaaatttatggattacaaaatccggaaaaatccgtaact-catttttcaccc 51258367  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatcc 253  Q
    | |||||||| ||||||| |||||||||||||||||||    
T  51258366 tttaacaaaggaaaacacaattccggattatgaaatcc 51258329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 33438683 - 33438503
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| ||||||  | |||||    
T  33438683 atgactatccatattacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaaatggtgttttgagggtt 33438584  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    |||  |||||||||||||  ||||||||||||||| | ||||||||||||||||| |||||||||||| | |||||| ||||    
T  33438583 tccacattatgtaatccg-gaacatcatgtaacgcgccctattttttgaagtttttggattacaaaattcagaaaaatccgt 33438503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 303
Target Start/End: Complemental strand, 39149961 - 39149683
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattat 126  Q
    |||||||||||||||||| |||||||| ||||| ||||| |||||||||| ||||| |||| |||||||||||| |||||| |||||||||||| |||||    
T  39149961 atgttacaaacatgtttaaaatttgtgctgatagagttcggattatataacccgaactgttttaccttgaaaaatggtgtttagggggtttccggattat 39149862  T
Q  127 gtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaaga 226  Q
    |||||||| |||||  ||||||||| | |||||||||| |||||  ||||||||||||||||||||| |||| |||   || || ||||| |||||||      
T  39149861 gtaatccggaaacactatgtaacgcgccctattttttg-agtttctggattacaaaatccggaaaaatccgttgctaattttttcaccctttaacaaaag 39149763  T
Q  227 aaaacaccattccggattatgaaatccggaatgctctgagagtgatttt---ggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||||||| ||||  ||||||  ||||| ||||||||| ||  | |||||   |||| |||||||||| ||||||||||||    
T  39149762 aaaacacaattctagattatataatccagaatgctctaaggataattttggaggaaaaaaaaataggacgcgcgaggaaa 39149683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 21 - 257
Target Start/End: Complemental strand, 3937537 - 3937310
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccg 120  Q
    |||| ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || |||||| ||||| ||||||         | ||    
T  3937537 ttatacatgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttaccttaaaaaagggtgtt---------ttcg 3937447  T
Q  121 aattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataa 220  Q
    |||||||||||||  |||||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||  |||| ||||||| || | |||||||    
T  3937446 aattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaattcggaaaaactcgtaactccatttttcatcctataa 3937347  T
Q  221 caaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||| |||||||||||| ||||||| ||||||||||    
T  3937346 caaaggaaaacaccattctggattataaaatccggaa 3937310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 52777384 - 52777166
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttga-aaaacggtgttcagggggtttccgaatt 124  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||| |||| |||||| |||||||||||  |||    
T  52777384 catgttacaaacatgtttagaatttgtgctgatacagttcaaattatataatccgaactgttttaccttgaaaaaagggtgtttagggggtttccttatt 52777285  T
Q  125 atgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaa 224  Q
    |||||||||| ||||||||||||| |  | ||| |||||||||||| |||||||||||||          ||||| ||||||| || | |||||||||||    
T  52777284 atgtaatccggaaacatcatgtaaagtgctcta-tttttgaagtttccggattacaaaat----------ccgtaactccatttttcatcctataacaaa 52777196  T
Q  225 gaaaaacaccattccggattatgaaatccg 254  Q
    | ||||||||||||| ||||||||||||||    
T  52777195 ggaaaacaccattccagattatgaaatccg 52777166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 49096224 - 49096463
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| | || |||| | |||||||||| | |||| |||||||     
T  49096224 atgactatctatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataattcaaactgtttttccttgaaaaaggctgtttagggggtg 49096323  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |  | |||||||||| |||||| ||||||||||   |  ||||||||||  ||| |||||||||||||||||||||| ||||| ||  ||| || |||||    
T  49096324 tttggattatgtaattcgaaaaaatcatgtaacatgccatattttttgagatttccggattacaaaatccggaaaaatccgtaact-tatttttcaccct 49096422  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     ||| ||||||||||| |||||| ||||||||||| |||||    
T  49096423 ttaataaagaaaaacatcattccagattatgaaattcggaa 49096463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 46622801 - 46622963
Alignment:
Q  37 catgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaa 136  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||| |||||||| |||||| |||||||||||  ||||||||||||| |    
T  46622801 catgtttagaatttgtgctgatacagttcggattatataatccgaactgttttactttgaaaaatggtgtttagggggtttccagattatgtaatccgga 46622900  T
Q  137 aacatcatgtaacgcacactattttttgaagttttcgg-attacaaaatccggaaaaagccgt 198  Q
    ||||||||||||||    |||||||||||||||| |||  ||| |||||||||||||| ||||    
T  46622901 aacatcatgtaacgtgtcctattttttgaagtttccggttttataaaatccggaaaaatccgt 46622963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 48304074 - 48303913
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagc 195  Q
    ||||| |||||| ||||||||| || ||||||||||| ||||| |||||||||| ||| |||||||||||  ||| |||||||||||||||||||||| |    
T  48304074 aaaaatggtgttgagggggttttcggattatgtaatctgaaaaaatcatgtaacacaccctattttttgagatttccggattacaaaatccggaaaaatc 48303975  T
Q  196 cgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||| |||  || || ||||| |||||||| |||||||||||||||||||||||||| ||||    
T  48303974 cgtaactcattttttcaccctttaacaaaggaaaacaccattccggattatgaaatctggaa 48303913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 169
Target Start/End: Original strand, 43472975 - 43473118
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||||||||| ||||||||||| |||| | || |||||| ||||| |||||| |||||||||||| ||||    
T  43472975 catgttacaaatatgtttaggatttgtgctgatacagttcggattatataattcgaactattttaccttaaaaaatggtgtttagggggtttccggatta 43473074  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagtt 169  Q
    ||||||||| ||||||||||||| ||||  ||||||||||||||    
T  43473075 tgtaatccggaaacatcatgtaatgcaccatattttttgaagtt 43473118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 254
Target Start/End: Original strand, 30721813 - 30722044
Alignment:
Q  29 gttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaat-gttgtaccttgaaaaacggtgttcagggg-gtttccgaattat 126  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| |  || | |||||||||| |||||| ||||| || | || |||||    
T  30721813 gttacaaacatgtttagaatttgtgctgatacagttcggattatataatctgaactatttttcccttgaaaaatggtgtttaggggagtgttcggattat 30721912  T
Q  127 gtaatccgaaaacatcatgtaa---cgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accctataaca 222  Q
    |||||||||||| |||||||||    || | |||||||||||||||||||||||||||||||   ||| | || || |||  || ||| || ||||||||    
T  30721913 gtaatccgaaaaaatcatgtaatattgcgccctattttttgaagttttcggattacaaaatctaaaaacatccataactcatttttttcactctataaca 30722012  T
Q  223 aagaaaaacaccattccggattatgaaatccg 254  Q
    ||| ||||||||| | | ||||||||||||||    
T  30722013 aaggaaaacaccagttcagattatgaaatccg 30722044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 45244446 - 45244322
Alignment:
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataac 221  Q
    ||||||||||||||||| |||||||||||| | |||||||||||  |||||| ||||||||||||||||||| || || |||  || || | | | ||||    
T  45244446 attatgtaatccgaaaaaatcatgtaacgcgccctattttttgagattttcgaattacaaaatccggaaaaatccataactcattttttcatcttttaac 45244347  T
Q  222 aaagaaaaacaccattccggattat 246  Q
    |||| ||||||| ||||||||||||    
T  45244346 aaaggaaaacacaattccggattat 45244322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 29035961 - 29035890
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgat-acagttcagattatataatccgaaatgtt 87  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  29035961 atgattatccatgttacaaacatgcttagaatttgtgttgataacagttcagattatataattcgaactgtt 29035890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 302
Target Start/End: Original strand, 34821512 - 34821676
Alignment:
Q  136 aaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacacca 235  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||  ||||  |||  || || ||||| |||||||  |||||||||    
T  34821512 aaacatcaggtaacgcgccctattttttgaagtttccggattacaaaatccggaaaattccgttactcattttttcaccctttaacaaaagaaaacacca 34821611  T
Q  236 ttccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaa 302  Q
    |||||||||||  |||| ||||| ||  ||| || ||||||  | ||||||| | ||||||||||||    
T  34821612 ttccggattatataatctggaatactacgagggtaattttg--aaaaaaaattgagcgcgcgaggaa 34821676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 45712081 - 45712151
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||||||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||| ||||    
T  45712081 atgattatccatgttacaaacatgatcataatttgtgctgatacagttcagattatataatccgaactgtt 45712151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 27143418 - 27143503
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgtt 107  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||  ||| |||| | |||||||||| ||||||    
T  27143418 tatccatgttacaaacatgttcagaatttgtgctgatacagatcagattatataatttgaactgtttttccttgaaaaagggtgtt 27143503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 47123188 - 47123140
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttc 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47123188 atgattatccatgttacaaacatgtttagaatttgtgctgatacagttc 47123140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 42936666 - 42936591
Alignment:
Q  182 aatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||| ||||||| ||||| |||| || || ||||| |||||||| |||||||||||||||||||||||||||||||    
T  42936666 aatctggaaaaatccgtaactccttttttcaccctttaacaaaggaaaacaccattccggattatgaaatccggaa 42936591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 42936745 - 42936686
Alignment:
Q  134 gaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    ||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  42936745 gaaaaaattatgtagcgcaccctattttttgaagttttcggattacaaaatccggaaaaa 42936686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 43420127 - 43420189
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatcc 79  Q
    ||||||||||||||||||||| |||| | |||||||||||||||| ||| |||||||||||||    
T  43420127 atgattatccatgttacaaacgtgttcataatttgtgttgatacaattctgattatataatcc 43420189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 47769424 - 47769358
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaa 83  Q
    |||| ||||||||||||||||||||| |||||||| | ||||||| |||||||| ||||||||||||    
T  47769424 atgactatccatgttacaaacatgttcagaatttgcgctgatacaattcagattctataatccgaaa 47769358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 26053518 - 26053579
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatc 78  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  26053518 atgactatccaagttataaacatgtttagaatttgtgttgatacagtttggattatataatc 26053579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 29048496 - 29048383
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggtttccgaatt 124  Q
    |||||||||||||| || |||||||||||||||| ||||| |||||||||||| ||| || || | |||||||||| | |||| ||||||| | || |||    
T  29048496 catgttacaaacatattcagaatttgtgttgatatagttccgattatataatctgaattgtttttcccttgaaaaaggatgtttagggggtgttcggatt 29048397  T
Q  125 atgtaatccgaaaa 138  Q
     | |||||||||||    
T  29048396 ctataatccgaaaa 29048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 303
Target Start/End: Complemental strand, 47123130 - 47122984
Alignment:
Q  155 ctattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||  |||  || || ||||| |||||||  |||||| |||||| ||||||  |||| |    
T  47123130 ctattttttgaagtttccggattacaaaattcggaaaaacccgttactcattttttcaccctttaacaaaagaaaacatcattccagattatataatctg 47123031  T
Q  255 gaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||||| ||| || ||||| ||  ||| ||||| |||||| ||||||    
T  47123030 gaatgctccgagggtaattttcga--aaagaatagagcgcgctaggaaa 47122984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 303
Target Start/End: Complemental strand, 47130496 - 47130350
Alignment:
Q  155 ctattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||  |||  || || ||||| |||||||  |||||| |||||| ||||||  |||| |    
T  47130496 ctattttttgaagtttccggattacaaaattcggaaaaacccgttactcattttttcaccctttaacaaaagaaaacatcattccagattatataatctg 47130397  T
Q  255 gaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||||| ||| || ||||| ||  ||| ||||| |||||| ||||||    
T  47130396 gaatgctccgagggtaattttcga--aaagaatagagcgcgctaggaaa 47130350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 47130554 - 47130506
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttc 65  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  47130554 atgattgtccatgttacaaacatgtttagaatttgtgctgatacagttc 47130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 512245 - 512315
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||| ||||||||||| ||||||||| | ||||||| |||||||| ||||||| |||||||||||| ||||    
T  512245 atgactatccatgttataaacatgttcataatttgtattgatacaattcagatgatataatccgaattgtt 512315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 5127901 - 5127955
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataa 76  Q
    ||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||    
T  5127901 tatccatgttacaaacatgtttaaaatttatgctgatacaattcagattatataa 5127955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 29035876 - 29035806
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||| ||||||||||||||||||||| ||||||||| || ||||| |||  ||||||||||||||| ||||    
T  29035876 atgactatccatgttacaaacatgttcagaatttgtattcatacaattcgaattatataatccgaactgtt 29035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 26464984 - 26464897
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttc 108  Q
    |||||||| |||||||||  |  | ||||| | ||||||||||||||||||||||||||||| |||| | ||| |||||| |||||||    
T  26464984 ttatccattttacaaacagatacaaaatttattttgatacagttcagattatataatccgaattgtttttcctagaaaaagggtgttc 26464897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 33700724 - 33700683
Alignment:
Q  212 accctataacaaagaaaaacaccattccggattatgaaatcc 253  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  33700724 accctttaacaaaggaaaacaccattccggattatgaaatcc 33700683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 512821 - 512873
Alignment:
Q  35 aacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||||| | |||||||||||||||| ||||||| |||||||||||| ||||    
T  512821 aacatgttcataatttgtgttgatacaattcagatgatataatccgaattgtt 512873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 33700835 - 33700775
Alignment:
Q  134 gaaaacatcatgtaacgcacactatttttt-gaagttttcggattacaaaatccggaaaaa 193  Q
    ||||| ||||||||  |||| ||||||||| |||||||||||||||||||||| |||||||    
T  33700835 gaaaaaatcatgtagtgcactctatttttttgaagttttcggattacaaaatctggaaaaa 33700775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 43473119 - 43473186
Alignment:
Q  189 aaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||| ||||| ||||||| || |||| | ||||||| ||||||||||||||||||||||||| |||||    
T  43473119 aaaaatccgtaactccatttttcacccaa-aacaaaggaaaacaccattccggattatgaaattcggaa 43473186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 12717171 - 12717243
Alignment:
Q  234 cattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    |||||| ||||||  |||||||| ||||| |||||| |||||||||  ||||||||||| |||||||||| ||||    
T  12717171 cattccagattatataatccggattgctcagagagtaattttggaa--aaaaatagggctcgcgaggaaacgcat 12717243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 14828919 - 14828978
Alignment:
Q  20 attatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatcc 79  Q
    ||||||||||||| |||||| ||||||||||| ||| ||| | ||| |||||||||||||    
T  14828919 attatccatgttataaacatatttagaatttgcgttaatatatttcggattatataatcc 14828978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 8735138 - 8735096
Alignment:
Q  212 accctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    ||||| |||||||| |||||||||||||| |||||||||||||    
T  8735138 accctttaacaaaggaaaacaccattccgaattatgaaatccg 8735096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 9087379 - 9087337
Alignment:
Q  212 accctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    ||||| |||||||| |||||||||||||| |||||||||||||    
T  9087379 accctttaacaaaggaaaacaccattccgaattatgaaatccg 9087337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 11486649 - 11486683
Alignment:
Q  49 ttgtgttgatacagttcagattatataatccgaaa 83  Q
    ||||||||| |||||||||||||||||||||||||    
T  11486649 ttgtgttgagacagttcagattatataatccgaaa 11486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 54229903 - 54229985
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacct-tgaaaaacggtgtt 107  Q
    |||||||||||||   | |||||||||||||||||||||   ||||||||||||||| |||| | ||| ||||||| ||||||    
T  54229903 catgttacaaacagactcagaatttgtgttgatacagtttgaattatataatccgaactgttttgcctctgaaaaagggtgtt 54229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 33842071 - 33842136
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||| ||||||||||||||| |||| |||| ||| || || ||||||| |||||||||    
T  33842071 atgactatccatattacaaacatgtttaaaattggtgtcgatgcaatttagattatgtaatccgaa 33842136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 34010091 - 34010156
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||||||||||||||   | | ||||| |||||||||| ||| |||||||||||||||| ||||    
T  34010091 tatccatgttacaaacagactcaaaatttatgttgatacaattcggattatataatccgaattgtt 34010156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 40062537 - 40062476
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    ||||||||||||||||||   | | |||||||| ||||| ||||| ||||||||||||||||    
T  40062537 ttatccatgttacaaacaaactcaaaatttgtgctgatatagttcggattatataatccgaa 40062476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 51492948 - 51492891
Alignment:
Q  30 ttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||| |||||||||||| |  |||||||| ||||||| |||||||| ||||    
T  51492948 ttacaaacatgattagaatttgtgctagtacagttcggattataaaatccgaactgtt 51492891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 47980003 - 47980063
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataat 77  Q
    |||| |||| |||||| ||| ||||| | |||||||| ||||||||||| |||||||||||    
T  47980003 atgactatctatgttataaatatgttcaaaatttgtgctgatacagttcggattatataat 47980063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 5e-93; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 17 - 308
Target Start/End: Complemental strand, 15799349 - 15799060
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| ||| |||||||| |||||| ||||||||    
T  15799349 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatctgaaatgttttacgttgaaaaagggtgtttagggggtt 15799250  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    | || ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||    
T  15799249 ttcggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgtaactccatttttcaccct 15799150  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||  || ||||||||  |||||||||||| |||||| ||| ||||    
T  15799149 ataacaaaggaaaataccattccggattatgaaatccggaatgctcagatggtaattttgga--aaaaaatagggctcgcgagtaaaggcat 15799060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 6156855 - 6156571
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||||||||| || ||||||| |||  |||||||||||||||  ||| |||||||||| | |||||| ||||||||    
T  6156855 atgactatccatgttacaaacatgtttagaatttatgctgatacaattcgtattatataatccgaacggttttaccttgaaagagggtgtttagggggtt 6156756  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || ||| |    
T  6156755 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgtaactccatttttcaccat 6156656  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||  |||||||||| ||||||||||||    
T  6156655 ataacaaaggaaaacaccattccggattatgaaatccggaatgctccgagggtaattttgga--aaaaaataggacgcgcgaggaaa 6156571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 33487734 - 33487494
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||  |||||| |||| |||    
T  33487734 atgactatccatgttacaaacatttttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaggggtgtttagggagtt 33487635  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||| |||||||| ||||| ||||||| || |||||    
T  33487634 tccggattatgtaacccgaaaacatcatataacgcgccctattttttgaagttttcggattacaaaattcggaaaaacccgtaactccatttttcaccct 33487535  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||| |||||||||||||||||||||||||||||||    
T  33487534 gtaacaaaggaaaacaccattccggattatgaaatccggaa 33487494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 4064717 - 4064957
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||| |||| |||||||||||| |||||| ||||||||    
T  4064717 atgactatccatgttacaaacatgtttagaatttgtgctgataaagttcggattatataattcgaactgttttaccttgaaaaagggtgtttagggggtt 4064816  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| ||||||||| |||| | | ||||||||| |||||| ||||||||| |||||||||||| ||||| ||||||| || |||||    
T  4064817 tccggattatgtaatccggaaacatcatctaacacgccctattttttaaagtttccggattacataatccggaaaaacccgtaactccatttttcaccct 4064916  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  4064917 ataacaaaggaaaacaccattccggattatgaaatccggaa 4064957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 26 - 249
Target Start/End: Original strand, 26190304 - 26190527
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || |||||| ||||| |||||| |||||||||| ||||||    
T  26190304 catgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttaccttaaaaaagggtgtttagggggtttctgaatta 26190403  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||| |||| ||||    
T  26190404 tgtaatccgaaaacatcatgtaacgcaccctattttttgaagtttccggattacaaaatccggaaaaatccgtaactccatttttcacccgataagaaag 26190503  T
Q  226 aaaaacaccattccggattatgaa 249  Q
     ||||||||||||| |||||||||    
T  26190504 gaaaacaccattccagattatgaa 26190527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 38692780 - 38693066
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||| ||    
T  38692780 atgattatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggg-tt 38692878  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagcc-gtagctccattctttaccc 215  Q
    |||| ||||||||||||| |||||||| ||||||| | ||||||||| |||||| ||||||||||||| |||||||| || ||  |||  || || ||||    
T  38692879 tccggattatgtaatccggaaacatcacgtaacgcgccctatttttttaagtttccggattacaaaattcggaaaaaacccgttactcattttttcaccc 38692978  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    | |||||||  |||||| |||||||||||||  |||||||||||||| ||| || |||||| || |||||||||||||||||| ||||    
T  38692979 tttaacaaaagaaaacatcattccggattatataatccggaatgctccgagggtaattttgaaaaaaaaaatagggcgcgcgaagaaa 38693066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 38871795 - 38871558
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| | |||| || |||||    
T  38871795 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaaagatgtttagagggtt 38871696  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    | || ||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||  |||  || || ||  |    
T  38871695 ttcggattatgtaatccggaaacatcatgtaacgccccctattttatgaagttttcggattacaaaatccggaaaaatccgttactcattttttaacttt 38871596  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccg 254  Q
     |||||||  |||||||||||||||||||| |||||||    
T  38871595 ttaacaaaagaaaacaccattccggattataaaatccg 38871558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 39524900 - 39524655
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  39524900 atgactatacatattacaaatatgtttagaatttgtgatgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 39524801  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||| |||||| |||||||||||||||||||||| || | ||||  || || |||||    
T  39524800 tccgaattatgtaatccgaaaacatcatgtaacacgccctatttttttaagtttccggattacaaaatccggaaaaatccattgctcattttttcaccct 39524701  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctc 262  Q
     |||||||  |||||| |||| |||||||   ||| ||||||||||    
T  39524700 ttaacaaaagaaaacatcatttcggattacataattcggaatgctc 39524655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 20891737 - 20891497
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  20891737 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 20891638  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accc 215  Q
    | || |||||||||| || ||||||||||||||   | |||||||||||||||| |||||||||||||||||||||| ||||  |||  || ||| |||     
T  20891637 ttcggattatgtaattcggaaacatcatgtaacatgccctattttttgaagtttccggattacaaaatccggaaaaatccgttactcatttttttcacca 20891538  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccgga 256  Q
    | ||| |||  ||||||||||| |||||||| |||||||||    
T  20891537 tttaataaaagaaaacaccatttcggattataaaatccgga 20891497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 40619987 - 40620279
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||||| |||||||||||| ||||||||||||||||  ||||||| ||| |||||||||||| ||||| || |||||||||||| | |||| ||||||||    
T  40619987 atgattgtccatgttacaagcatgtttagaatttgtactgatacaattcggattatataatctgaaatattttaccttgaaaaatgatgtttagggggtt 40620086  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||||||||||||| |||||  | |||||||||||||||| |||||||||||||||||||||| | ||  |||  || || |||||    
T  40620087 tccggattatgtaatccgaaaacatcatataacgtgccctattttttgaagtttccggattacaaaatccggaaaaatctgttactcattttttcaccct 40620186  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttgga-agaaaaaatagggcgcgcgaggaaatgcat 308  Q
      ||||||  |||||| ||||  |||||||  |||| ||||||||| ||| || |||||||| | |||||||||||||||||| |||||||||    
T  40620187 tcaacaaaagaaaacatcattatggattatataatctggaatgctccgagggtaattttggagaaaaaaaatagggcgcgcgaagaaatgcat 40620279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 25747149 - 25746911
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||| ||||| |||||| ||||| ||    
T  25747149 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttaaaaaatggtgtttaggggatt 25747050  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| |||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||| |||||||||||||| ||||  || |||| |||  | |    
T  25747049 tccggattatgtaatccgaaaacatcatgtaacgcgcccta-tttttgaagtttccggattagaaaatccggaaaaatccgttact-cattttttcactt 25746952  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||  |||||| ||||||| ||||| ||||||||||    
T  25746951 ttaacaaaagaaaacatcattccgaattataaaatccggaa 25746911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 254
Target Start/End: Complemental strand, 15957868 - 15957637
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccga 121  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||||     
T  15957868 tatctatgttacaaacatgtttagaatttgtactgatacagttcagattatataatccaaactgttttaccttgaaaatgggtgtttagggggtttccgg 15957769  T
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataac 221  Q
    ||||| ||||||| |||||||||||||  | | |||||||| ||||||| || ||||||||||||||||||| || |  || |||| || ||||| ||||    
T  15957768 attatttaatccggaaacatcatgtaatacgccctatttttcgaagtttccgaattacaaaatccggaaaaatccattact-catttttcaccctttaac 15957670  T
Q  222 aaagaaaaacaccattccggattatgaaatccg 254  Q
    |||  ||||||||||| |||||||| |||||||    
T  15957669 aaaagaaaacaccatttcggattataaaatccg 15957637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 28083375 - 28083604
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||| | |||| ||| |||||||| |||||| || |||||    
T  28083375 atgactatccatgttacaaatatgtttataatttgtgctgatacagttcggattatataatccggactgttttacgttgaaaaagggtgtttagagggtt 28083474  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| ||| ||||||||| || | |||||||||||| ||| |||||||||||||||||||||| ||||  |||  ||  | |||||    
T  28083475 tccggattatgtaatccggaaatatcatgtaatgcgccctattttttgaattttccggattacaaaatccggaaaaacccgttactcattttctcaccct 28083574  T
Q  217 ataacaaagaaaaacaccattccggattat 246  Q
     |||||||  |||||| |||||||||||||    
T  28083575 ttaacaaaagaaaacatcattccggattat 28083604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 38372433 - 38372252
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||| |||||||||||||||||||||| | ||||||||| |||||||||||| ||| |||| |||||||||||| ||| || | ||||||    
T  38372433 atgactatccatgtaacaaacatgtttagaatttgtgctaatacagttcggattatataatctgaactgttttaccttgaaaaagggtatttaaggggtt 38372334  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    |||||||||||||||||| |||||||||||||| | | ||||||||| |||||| ||||||||||||||| |||||| ||||    
T  38372333 tccgaattatgtaatccggaaacatcatgtaacccgccctatttttttaagtttccggattacaaaatccagaaaaatccgt 38372252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 31221336 - 31221504
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||  |||||||||||||||| |||| |||||||||||| |||||| || |||||    
T  31221336 atgactatccatgttacaaacatgtttataatttgtgctgatacagtttggattatataatccgaactgttttaccttgaaaaagggtgtttagagggtt 31221435  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatc 185  Q
    |||| ||||||||||||  |||||||||||||||| |  ||||||||||||||||||||||||| ||||    
T  31221436 tccggattatgtaatccagaaacatcatgtaacgcgccatattttttgaagttttcggattacagaatc 31221504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 29862736 - 29862582
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||| |||||||||||| |||||| ||||||||    
T  29862736 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgttttaccttgaaaaatggtgtttagggggtt 29862637  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagtttt 171  Q
    |||| ||||||||||||| ||||||||  |||||| | |||||||||||||||||    
T  29862636 tccggattatgtaatccggaaacatcacctaacgcgccctattttttgaagtttt 29862582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 24203681 - 24203917
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    ||||||||||  |||||||||||||||||||||| || ||||||||||| |||||||||| ||||| |||| |||| | ||||| |||||| ||||||||    
T  24203681 atgattatcccagttacaaacatgtttagaatttatgctgatacagttcggattatataacccgaactgttttaccctaaaaaagggtgtttagggggtt 24203780  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | ||||||||||||||     |||||||||||||| ||||| | ||   ||  || |  |||||    
T  24203781 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagt----cgattacaaaatccgaaaaaatctgttaatcatttttccaccct 24203876  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||  |||||||||||||||||||| ||||||||||    
T  24203877 ttaacaaaagaaaacaccattccggattataaaatccggaa 24203917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 27212833 - 27212595
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggt 115  Q
    |||| |||| |||||||||||||||||| |||||||  ||||| |||||  ||||||||||||||| |||| | || || ||||| ||||||||||| ||    
T  27212833 atgactatctatgttacaaacatgtttataatttgtactgatatagttcgaattatataatccgaactgtttttcccttcaaaaagggtgttcagggtgt 27212734  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
     | |   |||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||| ||||| ||||| |||  || || ||||    
T  27212733 gttctggttatgtaatccgaaaaaatcatgtaacgcaccctattttttgagattttcggattacaaaatccgaaaaaacccgtaactcattttttcaccc 27212634  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||| |||||| || | ||||||||||||||||    
T  27212633 tataacaaaggaaaacatcagttcggattatgaaatccg 27212595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 26319162 - 26319002
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagc 195  Q
    ||||| |||||| ||||||||| || ||||||||||||| |||||||||||||||||| |||||||  ||||||| ||||| |||||||||||||||| |    
T  26319162 aaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgtaacgcaccctattttg-gaagtttccggataacaaaatccggaaaaatc 26319064  T
Q  196 cgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||| ||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||    
T  26319063 cgtaactccatttttcaccctataacaaaggaaaacaccattccgaattatgaaatccggaa 26319002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 37183778 - 37184024
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttg-aaaaacggtgttcagggggt 115  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||| | ||||| ||||| |||||| || ||||    
T  37183778 atgactatccatgttacaaacatatttagaatttgtgttgatacagttcagattatataatccagactgttttgccttgaaaaaagggtgtttagagggt 37183877  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
    ||||| ||||||||||| ||||| |||||||||||  | ||||||||||||||||   ||||||||||||  |||||| | ||  |||  || || ||||    
T  37183878 ttccggattatgtaatctgaaaatatcatgtaacgtgccctattttttgaagtttcaagattacaaaatctagaaaaatctgttactcattttttcaccc 37183977  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctc 262  Q
      |||||||  ||||||  ||||||||||||  ||||||||||||||    
T  37183978 gttaacaaaagaaaacattattccggattatataatccggaatgctc 37184024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 31929121 - 31929386
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| |||||||||||  |||||| ||||||||    
T  31929121 atgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaaggggtgtttagggggtt 31929220  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||                  || | |||||||||||| |||  ||||||||||||||||||||| ||||  || |||| || |||||    
T  31929221 tccggattatgtaat------------------gcgccctattttttgaaatttctggattacaaaatccggaaaaatccgttact-catttttcaccct 31929301  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| |||||||||||||  |||||||||||||| ||| || ||||||  | |||||||||||||| ||||||||    
T  31929302 ttaacaaaagaaaacatcattccggattatataatccggaatgctccgagggtaattttg--aaaaaaaatagggcgcacgaggaaa 31929386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 26095219 - 26095047
Alignment:
Q  14 aatatgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcaggg 112  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | || | || ||||||||  ||||| | ||    
T  26095219 aatatgactatccatgttacaaacatgtttagaatttatgttgatacaattcagattatataatccgaactatttttcctttgaaaaagagtgtttatgg 26095120  T
Q  113 ggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatc 185  Q
    ||| | || ||||||||||||||||| |  ||||||||| | ||||||||||  ||||| |||||||||||||    
T  26095119 ggtgttcggattatgtaatccgaaaaaaatatgtaacgcgctctattttttgtggtttttggattacaaaatc 26095047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 37095022 - 37095144
Alignment:
Q  127 gtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaaga 226  Q
    |||||||| |||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||     
T  37095022 gtaatccggaaacatcatgtaacgcgccttatttttt-aagttttcggattacaaaatccggaaaaatccgtaactccatttttcaccctataacaaag- 37095119  T
Q  227 aaaacaccattccggattatgaaat 251  Q
     ||||||||||||||||||||||||    
T  37095120 gaaacaccattccggattatgaaat 37095144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 32841968 - 32842145
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||| |||  ||||||||||||||| || || | |||||||||| |||||| | |||||    
T  32841968 atgactatccatgttacaaacatgtttaaaatttgtgctgatacaattcgaattatataatccgaactgtttttcccttgaaaaagggtgtttatggggt 32842067  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
     | || |||||||||||   ||| || || || ||| | |||||||||||||||| ||||||||||||||||||||||    
T  32842068 gttcggattatgtaatcttgaaaaattatctagcgcgccctattttttgaagtttccggattacaaaatccggaaaaa 32842145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 12465214 - 12465337
Alignment:
Q  128 taatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaa 227  Q
    ||||||| |||||||||||||| | | |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||||   ||||      
T  12465214 taatccggaaacatcatgtaacacgccctattttttgaagtttccggattacaaaatccggaaaaatccgtaactccatttttcaccctat---aaaggc 12465310  T
Q  228 aaacaccattccggattatgaaatccg 254  Q
    ||||||||||| |||| ||||||||||    
T  12465311 aaacaccattctggatcatgaaatccg 12465337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 34440778 - 34440628
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagc 195  Q
    ||||| |||||| ||||||||| || |||||| |||||||||||||||||||||||   ||| ||||||||||||||||||||||||||          |    
T  34440778 aaaaagggtgtttagggggttttcggattatgcaatccgaaaacatcatgtaacgcgtccta-tttttgaagttttcggattacaaaat----------c 34440690  T
Q  196 cgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||| ||||||| ||||||||||||||||| |||||| |||| | ||||||||||| |||||    
T  34440689 cgtaactccattttttaccctataacaaaggaaaacatcatttcagattatgaaattcggaa 34440628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 14111946 - 14111851
Alignment:
Q  92 cttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    ||||||||| |||||| ||||| ||| |  |||||||||||| ||||||||||||||||| | ||||||||||||||||  |||||||||||||||    
T  14111946 cttgaaaaagggtgtttaggggattttcagattatgtaatccaaaaacatcatgtaacgcgccctattttttgaagtttctggattacaaaatccg 14111851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 7884304 - 7884234
Alignment:
Q  30 ttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||    
T  7884304 ttacaaacatatttagaatttgtgttgatacagttcagattatataattcgaactgttttaccttaaaaaa 7884234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 257
Target Start/End: Original strand, 36359662 - 36359823
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagc 195  Q
    ||||| |||||| ||||||||| |  ||||||||||||||||| ||||||| ||||   |||||||||||  |||  ||||||||||||||| ||||  |    
T  36359662 aaaaaaggtgtttagggggttttcagattatgtaatccgaaaaaatcatgttacgcgtcctattttttgagatttctggattacaaaatccgaaaaattc 36359761  T
Q  196 cgtagctccattctttaccctataacaaagaaaaaca-ccattccggattatgaaatccggaa 257  Q
    |||| || |||| || ||||| |||||||  |||||| ||||||| |||||||||||||||||    
T  36359762 cgtaact-catttttcaccctttaacaaaagaaaacacccattccagattatgaaatccggaa 36359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 13908672 - 13908545
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| ||||| ||||||||||||||||| ||||| |||||||||| ||| |||||||||||||||| || || | ||||||||||  ||||| ||| |||    
T  13908672 atgactatccgtgttacaaacatgtttaaaatttatgttgatacaattcggattatataatccgaactgtttttcccttgaaaaagagtgtttaggaggt 13908573  T
Q  116 ttccgaattatgtaatccgaaaacatca 143  Q
     | | |||||| ||||||||||| ||||    
T  13908572 gttcaaattatataatccgaaaaaatca 13908545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 1350311 - 1350377
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||| ||||    
T  1350311 ttatccatgttacaaacatgtttagaatttgtgttgatatagtttgaattatataatccgaactgtt 1350377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 27158208 - 27158144
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccga 81  Q
    |||| |||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||||    
T  27158208 atgactatccatgtttcaaacatgttcataatttgtgctgatacagttcagattatataatccga 27158144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 12847567 - 12847497
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||| ||| ||||| ||||    
T  12847567 atgattatctatgttacaaacatgttcagaatttgtgctgatacagttcggattatttaaaccgaactgtt 12847497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 40613675 - 40613742
Alignment:
Q  20 attatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||||||||| | ||||| || | ||||||||| |||||||||||||||| ||||    
T  40613675 attatccatgttacaaacatgttcataatttttgctcatacagttcggattatataatccgaactgtt 40613742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 8032321 - 8032219
Alignment:
Q  91 ccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaa 190  Q
    |||||||||| |||||| ||| ||| | || ||||||||||||| ||| ||||||||| |  | |||||||||||| ||| | |||||||||||||| ||    
T  8032321 ccttgaaaaagggtgtttaggaggtgttcggattatgtaatccggaaaaatcatgtaatgtgccctattttttgaaatttccagattacaaaatccgaaa 8032222  T
Q  191 aaa 193  Q
    |||    
T  8032221 aaa 8032219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 38640741 - 38640604
Alignment:
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt--accctata 219  Q
    ||||||||||||||| | ||||| |||||| | |||||||||||  ||| | ||||| |||||||| |||   | |||||||  || |||  ||||| ||    
T  38640741 attatgtaatccgaataaatcatttaacgcgccctattttttgagatttccagattataaaatccgaaaatctctgtagctcattttttttcacccttta 38640642  T
Q  220 acaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||| ||||||||||||| |||||| ||||||||||    
T  38640641 acaaaggaaaacaccattccagattataaaatccggaa 38640604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 8738982 - 8739047
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||  |||||| |||||||||    
T  8738982 atgactatccatgttacaaacatgttcagaattggtgttgatgcagtttggattatgtaatccgaa 8739047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 18514922 - 18514757
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggtttcc 119  Q
    ||||| |||||||||||||  |||||||||||| |||| | ||||||||||||||||| ||| || || | || |||| || |||||| |||||||   |    
T  18514922 ttatctatgttacaaacatacttagaatttgtgatgatgcggttcagattatataatctgaactgtttttcccctgaataagggtgtttagggggtgatc 18514823  T
Q  120 gaattatgtaatccgaaaacat-catgtaacgcacactattttttgaagttttcggattacaaaat 184  Q
     |||| | ||||||||||| ||  | | ||||||| ||||||||||  || |||||||||||||||    
T  18514822 aaattctataatccgaaaaaatgtaaggaacgcaccctattttttggggtgttcggattacaaaat 18514757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 23348420 - 23348361
Alignment:
Q  249 aatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    |||||||||||||| ||| || ||||||||| |||||||||||||||| |||||| ||||    
T  23348420 aatccggaatgctccgagggtaattttggaaaaaaaaatagggcgcgctaggaaaggcat 23348361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 20231107 - 20231053
Alignment:
Q  249 aatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||| ||||||||| ||| || ||||||||| |||||||||||||||||||||||    
T  20231107 aatctggaatgctccgagggtaattttggaaaaaaaaatagggcgcgcgaggaaa 20231053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 16429196 - 16429157
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttg 56  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  16429196 atgactatccatgttacaaacatgtttagaattggtgttg 16429157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 1350456 - 1350498
Alignment:
Q  212 accctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  1350456 accctataacaaaggaaaacaccagttcggattatgaaatccg 1350498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 34530034 - 34529976
Alignment:
Q  135 aaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    |||| |||||||||| | | ||||||||||| ||||| ||||||||||||||| |||||    
T  34530034 aaaaaatcatgtaacacgccctattttttgaggtttttggattacaaaatccgaaaaaa 34529976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 41639494 - 41639552
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatcc 79  Q
    ||||| ||||||||||||   | |||||||||| ||||||||||| |||||||||||||    
T  41639494 ttatctatgttacaaacagactcagaatttgtgctgatacagttcggattatataatcc 41639552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 6800931 - 6800984
Alignment:
Q  24 tccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataat 77  Q
    |||||||| |||||||||| | ||||| || |||||||||||| ||||||||||    
T  6800931 tccatgttgcaaacatgttcataatttatgctgatacagttcaaattatataat 6800984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 38030799 - 38030770
Alignment:
Q  228 aaacaccattccggattatgaaatccggaa 257  Q
    ||||||||||||||||||||||||||||||    
T  38030799 aaacaccattccggattatgaaatccggaa 38030770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 14111991 - 14111947
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgataca 61  Q
    |||| |||||||||||||||||| |||| |||||||| |||||||    
T  14111991 atgactatccatgttacaaacatatttaaaatttgtgctgataca 14111947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 19835690 - 19835405
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  19835690 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 19835591  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||| ||||  |||  || || |||||    
T  19835590 tccggattatgtaatccggaaacatcatgtaacgcaccctatttttcaaagtttccggattacaaaatccggaaaaacccgttactcattttttcaccct 19835491  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| |||||||||||||  |||||||||||||| |||||| ||||| ||| |||||||||||||||||| ||||    
T  19835490 ttaacaaaagaaaacatcattccggattatataatccggaatgctccgagagtaatttt-gaaaaaaaaatagggcgcgcgaagaaa 19835405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 55052616 - 55052856
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||| |||| |||||||||||| |||||| ||||||||    
T  55052616 atgactatccatgttacaaacatgtttagaatttgtgctgataaagttcggattatataattcgaactgttttaccttgaaaaagggtgtttagggggtt 55052715  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||| ||||||| ||||||||| |||| | | |||||||||||||||| ||||||||| |||||||||||| ||||| ||||||| || |||||    
T  55052716 tccggattatataatccggaaacatcatctaacacgccctattttttgaagtttccggattacataatccggaaaaacccgtaactccatttttcaccct 55052815  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  55052816 ataacaaaggaaaacaccattccggattatgaaatccggaa 55052856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 33 - 303
Target Start/End: Complemental strand, 29822773 - 29822503
Alignment:
Q  33 caaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatc 132  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||| | |||||| | |||||||||| |||||||||||    
T  29822773 caaacatgtttagaatttgtgctgatacagttcggattatataatccgaattgttttaccttgaaagagggtgtttatggggtttccggattatgtaatc 29822674  T
Q  133 cgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaaca 232  Q
    ||||||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || ||||||||||||||  |||||    
T  29822673 cgaaaacatcatgtaacgcgctgtattttttgaagtttccggattacaaaatccggaaaaacccgtaactccatttttcaccctataacaaag-gaaaca 29822575  T
Q  233 ccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaa-aatagggcgcgcgaggaaa 303  Q
    |||||||  ||||||||||||||||||||| |||  | ||||||||| |||| ||||||| |||| ||||||    
T  29822574 ccattccatattatgaaatccggaatgctccgaggataattttggaaaaaaagaatagggtgcgcaaggaaa 29822503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 38536340 - 38536056
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||||||||||||||||||||||||||||  |||||| || ||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  38536340 atgactattcatgttacaaacatgtttagaatttgtgcagatacaatttagattatataatccgaactgttttaccttgaaaaaaggtgtttagggggtt 38536241  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||| | |||||||||||||| | | |||||||||||||||| || ||||||||||||||||||| ||||| || |||| || |||||    
T  38536240 tccggattatgtaatctggaaacatcatgtaacacgccctattttttgaagtttccgaattacaaaatccggaaaaacccgtaacttcatttttcaccct 38536141  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccgg-aatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||    || |   |||||||| |||||||||||||||||||||||    
T  38536140 ataacaaaggaaaacaccatttcggattatgaaatccggaaatgc---aagggcatttttggaaaaaaaaatagggcgcgcgaggaaa 38536056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 303
Target Start/End: Complemental strand, 7931822 - 7931546
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccga 121  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||| ||| |||| ||  |||||| ||||||||||||     
T  7931822 tatccatgttacaaacatgtttagaatttgtgctaatatagttcagattatataatccgaactgttttacattgagaag-ggtgtttagggggtttccgg 7931724  T
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataac 221  Q
    ||||||||||||| |||||| ||||||||| | |||||||||||||||| |||||| ||||||||||||||| ||||  |||  || || ||||| ||||    
T  7931723 attatgtaatccggaaacataatgtaacgcgccctattttttgaagtttccggattgcaaaatccggaaaaacccgttactcattttttcaccctttaac 7931624  T
Q  222 aaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||  ||||   |||||||||||||  |||||||||||||||||  || ||||||||| |||||||||||||||||||||||    
T  7931623 aaaagaaaa---cattccggattatataatccggaatgctctgacggtaattttggaa-aaaaaatagggcgcgcgaggaaa 7931546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 25491392 - 25491676
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  25491392 atgactattcatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaattgttttaccttgaaaaaaggtgtttagggggtt 25491491  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||||||| |||||  |||  |||  || || |||||    
T  25491492 tccggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccgaaaaaactcgttactcattttttcaccct 25491591  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| |||||||||||||  |||   |||||||| ||   | ||||||||  ||||||||||| |||||||||||    
T  25491592 ttaacaaaagaaaacatcattccggattatataattttgaatgctccgaagataattttgga--aaaaaatagggtgcgcgaggaaa 25491676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 257
Target Start/End: Complemental strand, 32441976 - 32441741
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccg 120  Q
    |||| ||||||||||| |||||||  || |||| || |||||||  |||||||||||||||| | || |||||| |||||  ||||| ||||| ||||||    
T  32441976 ttatacatgttacaaatatgtttacgatatgtgctggtacagtttggattatataatccgaactattttaccttaaaaaaatgtgtttagggg-tttccg 32441878  T
Q  121 aattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataa 220  Q
     ||||||||||||| |||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||| || || ||||||| || |||||||||    
T  32441877 gattatgtaatccggaaacatcatgtaacgcgcgctattttttgaagtttccggattacaaaatccagaaaaatccttaactccatttttcaccctataa 32441778  T
Q  221 caaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||| |||||||||||||||||||||||||||||||    
T  32441777 caaaggaaaacaccattccggattatgaaatccggaa 32441741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 276
Target Start/End: Complemental strand, 40703834 - 40703574
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  40703834 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 40703735  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt--acc 214  Q
    | |   |||||||||||| ||||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||| ||||  || ||||||||  |||    
T  40703734 ttcaggttatgtaatccggaaacatcatgtaatgcaccctattttttgaaatttccggattacaaaatccggaaaaatccgttact-cattcttttcacc 40703636  T
Q  215 ctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttg 276  Q
    || ||| |||  |||||| |||||| ||||||   || |||||||||| ||| || ||||||    
T  40703635 ctttaaaaaaagaaaacatcattccagattatattattcggaatgctccgagggtaattttg 40703574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 304
Target Start/End: Original strand, 48319061 - 48319345
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttg-aaaaacggtgttcagggggt 115  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| ||||| |||||| |||||||    
T  48319061 atgactatcaatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgagctgttttaccttgaaaaaaaggtgtttagggggt 48319160  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
    || || ||||||||||||  |||||||||||||||| | |||||||||||||||| |||||||| ||||||||||||| ||||  |||  || || ||||    
T  48319161 tttcggattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattac-aaatccggaaaaatccgtcactcattttttcaccc 48319259  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaat 304  Q
    | |||||||  |||||| ||||  ||||||   |||||||||||||  ||| || ||||||   |||||||||||||||||||||||||    
T  48319260 tttaacaaaagaaaacatcattgtggattaaataatccggaatgcttcgagggtaattttg---gaaaaaatagggcgcgcgaggaaat 48319345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 17933134 - 17933379
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |||| |||||| ||||| |||||| | ||||||    
T  17933134 atgattatccatgttacaaacatgtttagaatttgtgctgatactgttcggattatataatccgaactgttttaccttaaaaaagggtgtttaaggggtt 17933233  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||  ||||||||||||| |||||||||||||||| | ||||||||||||||||  ||||||||||||| ||||||| ||||   ||  || |  |||||    
T  17933234 tccagattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttctggattacaaaatctggaaaaatccgttattcatttttgcaccct 17933333  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctc 262  Q
     |||||||  |||||| |||||| ||||||  ||||||||||||||    
T  17933334 ttaacaaaagaaaacatcattccagattatataatccggaatgctc 17933379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 6228819 - 6229044
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacgg--tgttcagggggtttccgaat 123  Q
    |||||||| || || ||||| ||||| ||||||||||||| |||||||||||||||| | || |||||| ||||| ||  |||| ||||| |||||||||    
T  6228819 catgttactaatatctttaggatttgagttgatacagttcggattatataatccgaactattttaccttaaaaaaaggggtgtttagggg-tttccgaat 6228917  T
Q  124 tatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaa 223  Q
    |   ||||||| |||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||| ||||||||||||| || ||||||||||||    
T  6228918 t---taatccggaaacatcatgtaacgcgccctattttttgaagtttccgggttacaaaatccggaaaaatccgtagctccatttttcaccctataacaa 6229014  T
Q  224 agaaaaacaccattccggattatgaaatcc 253  Q
    || |||||||||||||||||||||||||||    
T  6229015 aggaaaacaccattccggattatgaaatcc 6229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 257
Target Start/End: Complemental strand, 49397174 - 49396938
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccg 120  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||| | |||||||||||||| | || ||| || ||||| | |||| | ||| ||| ||    
T  49397174 ttatacatgttacaaatatgtttaggatttttgctgatacagttcggtttatataatccgaactattttacattaaaaaatgatgtttaagggattttcg 49397075  T
Q  121 aattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataa 220  Q
     |||||||||||| |||||||| |||||||||  |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  49397074 gattatgtaatccaaaaacatcttgtaacgcatcctattttttgaagtttccggattacaaaatccggaaaaatccgtaactccatttttcaccctataa 49396975  T
Q  221 caaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||| |||||| ||||||||||||||||||||||||    
T  49396974 taaaggaaaacatcattccggattatgaaatccggaa 49396938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 23524068 - 23523840
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacgg-tgttcagggggtttccgaatt 124  Q
    ||||||||||| |||||||| ||||||| |||||||||   |||||||||||||||| | || |||||| ||||| || |||| |||||||||| | |||    
T  23524068 catgttacaaatatgtttaggatttgtgctgatacagtgtggattatataatccgaattattttaccttaaaaaaagggtgtttagggggtttctggatt 23523969  T
Q  125 atgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaa 224  Q
    |||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||||||| ||||| ||||| ||||||| || ||||| |||||||    
T  23523968 atgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccgaaaaaatccgtaactccatttttcaccctctaacaaa 23523869  T
Q  225 gaaaaacaccattccggattatgaaatcc 253  Q
    | |||||| ||||||| ||||||||||||    
T  23523868 ggaaaacatcattccgaattatgaaatcc 23523840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 46440271 - 46440452
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  46440271 atgaatatccatgttacaaccatgtttagaatttgtgctgatatagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 46440370  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    |||| ||||||||||||| ||||||||||||||||   ||||||||| |||||| ||||||| ||||| |||||||| ||||    
T  46440371 tccggattatgtaatccggaaacatcatgtaacgcgtcctatttttttaagtttccggattataaaattcggaaaaacccgt 46440452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 34973025 - 34972804
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| |||| || ||||||||||| |||||||||||||||| | || |||||| ||||| |||||| ||||||||| || ||||    
T  34973025 catgttacaaatatgtttaggatttatgctgatacagttcggattatataatccgaactattttaccttaaaaaatggtgtttagggggttttcggatta 34972926  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    |||| ||||||||||||||||||||| | ||||||||| |||||| | |||||||||||          ||||| ||||||| || ||||||||||||||    
T  34972925 tgtagtccgaaaacatcatgtaacgcgccctatttttttaagtttccagattacaaaat----------ccgtaactccatttttcaccctataacaaag 34972836  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||||||||||||||||||||||||||    
T  34972835 gaaaacaccattccggattatgaaatccggaa 34972804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 3703246 - 3703487
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| |||| |||||||||| |||||||||||||||| ||||||||||   ||||||||| |  || || || | |||||||||| |||||| |||||||    
T  3703246 atgactatctatgttacaaaaatgtttagaatttgtgctgatacagtttgaattatataaccataactgtttttcccttgaaaaatggtgtttagggggt 3703345  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
     | |||||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||||||||| ||||| ||||| |||  || || ||||    
T  3703346 gttcgaattatgtaatccgaaaaaatcatgtaacacgtcctattttttgaagttttcggattacaaaatccgaaaaaatccgtaactcattttttcaccc 3703445  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||||||| ||||||| | | |||||||||||||||||||    
T  3703446 tataacaaaggaaaacactagttcggattatgaaatccggaa 3703487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 89 - 257
Target Start/End: Original strand, 25539017 - 25539185
Alignment:
Q  89 taccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccgg 188  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||||  ||||||||||||||   | |||||||||||||||| |||||||||||||||||    
T  25539017 taccttgaaaaatagtgtttagggggtttccggattatgtaatccagaaacatcatgtaacatgccctattttttgaagtttccggattacaaaatccgg 25539116  T
Q  189 aaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||| ||||| ||||||| || ||| |||||||||| |||||||||||||||||||||||||||||||    
T  25539117 aaaaacccgtaactccatttttcaccatataacaaaggaaaacaccattccggattatgaaatccggaa 25539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 6003670 - 6003906
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||| ||| ||| |||||||  |||||||  |||||||||| |||||||||||||||| | || |||||| ||||  |||||| ||||||||    
T  6003670 atgactatacatattaaaaatatgtttatgatttgtgccgatacagttcggattatataatccgaactattttaccttaaaaa--ggtgtttagggggtt 6003767  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacacta--ttttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttacc 214  Q
    |||| ||||||||||||| |||||||||||||||||| ||   |||||| |||||| ||||||| ||||| || ||||| ||||| ||||||| || |||    
T  6003768 tccggattatgtaatccggaaacatcatgtaacgcactcttattttttttaagtttccggattataaaattcgaaaaaatccgtaactccatttttcacc 6003867  T
Q  215 ctataacaaagaaaaacaccattccggattatgaaatcc 253  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  6003868 ctataacaaaggaaaccaccattccggattatgaaatcc 6003906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 25752441 - 25752617
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| | ||||| ||| ||| |||||||||||| |||| |||||||||||| |||||| | ||||||    
T  25752441 atgactatccatgttacaaacatgtttagaatttgtgctaatacatttcggatcatataatccgaactgttttaccttgaaaaagggtgtttatggggtt 25752540  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    | || ||||||||||| | ||||||||||||| || | |||||||||||| ||| ||||||||||||||||||||||    
T  25752541 ttcggattatgtaatctggaaacatcatgtaatgcgccctattttttgaaatttccggattacaaaatccggaaaaa 25752617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 31582419 - 31582550
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  31582419 atgactatccatgttacaaacatgtttagaatttgtgctgatacaattcagattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 31582518  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaa 148  Q
    |||| ||||||||||| |||||||||||||||    
T  31582519 tccggattatgtaatcagaaaacatcatgtaa 31582550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 43 - 263
Target Start/End: Original strand, 54631485 - 54631706
Alignment:
Q  43 tagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacg-gtgttcagggggtttccgaattatgtaatccgaaaacat 141  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||| ||||||||||||   ||||| |||||||||||| ||||||||||||| ||||||    
T  54631485 tagaatttgtgctgatacagttcagattgtataatccgaactgttttaccttgaaaaaaatgtgtttagggggtttccggattatgtaatccggaaacat 54631584  T
Q  142 catgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccgg 241  Q
    |||||||||| |  || |||||||||||| |||||||||||||||||||||| ||||  |||  || |  ||||| |||||||  |||||  ||||||||    
T  54631585 catgtaacgcgccatactttttgaagtttccggattacaaaatccggaaaaacccgttactcatttttccaccctttaacaaaagaaaacgtcattccgg 54631684  T
Q  242 attatgaaatccggaatgctct 263  Q
    |||||  |||||| ||||||||    
T  54631685 attatataatccgtaatgctct 54631706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 2506028 - 2506162
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| || |||| |||||||||||| |||||| ||||||||    
T  2506028 atgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatccaaactgttttaccttgaaaaagggtgtttagggggtt 2506127  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgc 151  Q
    |||| ||||||||||||| ||||||||||||||||    
T  2506128 tccggattatgtaatccggaaacatcatgtaacgc 2506162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 8106563 - 8106387
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacctt-gaaaaacggtgttcagggggt 115  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||| | || | || | |||||| |||||| |||||||    
T  8106563 atgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatctgaactatttttccctagaaaaatggtgtttagggggt 8106464  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaa 192  Q
     | || |||||||||| || ||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||||    
T  8106463 gttcggattatgtaatacggaaaaatcatgtagcgcgccctattttttgaagttttcggattacaaaatccggaaaa 8106387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 41413095 - 41413249
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattata--taatccgaaatgttgtaccttgaaaaacggtgttcaggggg 114  Q
    |||| ||| ||||||||||| |||||||| ||||||| ||||||||||| |||||||  ||||||||| | || |||||| |||||  ||||| ||||||    
T  41413095 atgactatacatgttacaaatatgtttaggatttgtgctgatacagttcggattatatataatccgaactattttaccttaaaaaagagtgtttaggggg 41413194  T
Q  115 tttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttt 170  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  41413195 tttccggattatgtaatccggaaacatcatgtaacgctc-ctattttttgaagttt 41413249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 308
Target Start/End: Original strand, 53894108 - 53894277
Alignment:
Q  137 aacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccat 236  Q
    ||||||||||||||| | |||||||||||||||| | |||| ||||||||||||||| ||||   ||  || || ||||| |||||||  |||||| |||    
T  53894108 aacatcatgtaacgcgccctattttttgaagtttcctgattgcaaaatccggaaaaacccgttagtcattttttcaccctttaacaaaagaaaacatcat 53894207  T
Q  237 tccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    ||||||||||  ||| |||||||||| |||  | ||||||||  ||||||||||||||||||||||| ||||    
T  53894208 tccggattatataattcggaatgctccgaggataattttgga--aaaaaatagggcgcgcgaggaaaggcat 53894277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 7863611 - 7863541
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  7863611 atgattgtccatgttacaaacatgtttagaatttgtgcagatacagttcagattatataatccgaactgtt 7863541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 41323089 - 41323180
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgtt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||||||| || || | |||||||||| ||||||    
T  41323089 atgattatccatgttacaaacatgtttagaatttgtgttgatacggttaaaatgatataatccgaattgtttttcccttgaaaaagggtgtt 41323180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 53894022 - 53894085
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccg 80  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  53894022 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccg 53894085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 37222127 - 37222040
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgtt 107  Q
    |||||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||| || || | |||||||||| ||||||    
T  37222127 ttatccatgttacaaacatgtttagaatttatgctgatacaattcaaattatataatccgaactgtttttcccttgaaaaagggtgtt 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 31582555 - 31582648
Alignment:
Q  213 ccctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    ||||||||||||| ||||||| |||||||||||||||||||  |||||||| || || ||||||||  |||||||||| ||||| |||||| ||||    
T  31582555 ccctataacaaaggaaaacacaattccggattatgaaatccaaaatgctctaagggtaattttgga--aaaaaataggacgcgcaaggaaaggcat 31582648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 38416649 - 38416501
Alignment:
Q  103 gtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagct 202  Q
    ||||| ||||||| | || ||||||||||||||||| |||||||||||  | ||||||||| | |||| |||||||||||||  | ||||| ||| | ||    
T  38416649 gtgtttagggggtgttcggattatgtaatccgaaaaaatcatgtaacgtgccctatttttttatgtttccggattacaaaatttgaaaaaatccgcaact 38416550  T
Q  203 ccattctttaccctataacaaagaaaaacaccattccggattatgaaat 251  Q
    |  || || |||||||||||||| ||||||||  | | |||||||||||    
T  38416549 cattttttcaccctataacaaaggaaaacacctattcagattatgaaat 38416501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 14474213 - 14474268
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataat 77  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  14474213 tatccatgttacaaacatgttcaaaatttgtgttgatacaattcagattatataat 14474268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 41413250 - 41413309
Alignment:
Q  195 ccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    ||||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  41413250 ccgtaactccatttttcaccctataacaaagaaaaacactattccggattatgaaatccg 41413309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 35420818 - 35420740
Alignment:
Q  225 gaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||| | |||||| ||||||  |||||||||||||| ||| || ||||||||| |||||||||||||||||||||||    
T  35420818 gaaaaatagcattccagattatataatccggaatgctccgagtgtaattttggaaaaaaaaatagggcgcgcgaggaaa 35420740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 38416987 - 38416937
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatataat 77  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  38416987 atgttacaaacatgtttaaaatttgtgctgatacagttcagattatataat 38416937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 50392529 - 50392647
Alignment:
Q  140 atcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accctataacaaagaaaaacaccattc 238  Q
    |||||||||||| | | |||||||||  ||| |||||||||||||||||||||| ||||| |||  || ||| || || |||||||| |||||||| |||    
T  50392529 atcatgtaacgcgccccattttttgagatttccggattacaaaatccggaaaaatccgtaactcatttttttcactctttaacaaaggaaaacaccgttc 50392628  T
Q  239 cggattatgaaatccggaa 257  Q
    |||||||  ||||||||||    
T  50392629 cggattactaaatccggaa 50392647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 346191 - 346283
Alignment:
Q  46 aatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaa 138  Q
    ||||||||||||||||||||||||| ||||||| ||| |||| | ||||||| || |||||| | ||||| | |||||||| |||| ||||||    
T  346191 aatttgtgttgatacagttcagattctataatctgaactgttttcccttgaataatggtgtttaaggggtgttcgaattatataattcgaaaa 346283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 27879709 - 27879657
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatc 78  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  27879709 catgttacaagcatgttcagaatttgtgctgatacagttcagattatataatc 27879657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 25538976 - 25539019
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatac 60  Q
    |||| |||||||||||||||||||||||||||||||| ||||||    
T  25538976 atgactatccatgttacaaacatgtttagaatttgtgctgatac 25539019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 32601002 - 32600927
Alignment:
Q  25 ccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaa 100  Q
    ||||||||||| |||||| |||||||||| ||||||| |||| || |||||||| ||| |||| | ||||||||||    
T  32601002 ccatgttacaagcatgttcagaatttgtgctgatacaattcatatcatataatctgaactgtttttccttgaaaaa 32600927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 372089 - 372024
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||||||| ||||||| | | |||||||| |||||||||| |||| ||||||||||||    
T  372089 atgactatccatgttataaacatgctcataatttgtgctgatacagttgagatgatataatccgaa 372024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 27742121 - 27742169
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatata 75  Q
    |||||||||||||||||| |||||||| ||||||| |||| ||||||||    
T  27742121 atgttacaaacatgtttaaaatttgtgctgatacaattcaaattatata 27742169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 53836215 - 53836282
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaat 84  Q
    |||| |||||||||| |||| | ||| | ||||| | |||||||||||| ||||||||||||||||||    
T  53836215 atgactatccatgttgcaaataggttcataatttatattgatacagttcggattatataatccgaaat 53836282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 18487665 - 18487731
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||||   | | |||||||| ||||||| |||||||||||||||| ||| ||||    
T  18487665 ttatccatgttacaaacagactcaaaatttgtgatgatacaattcagattatataatctgaattgtt 18487731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 47784159 - 47784101
Alignment:
Q  17 atgattatccatgttacaaaca-tgtttagaatttgtgttgatacagttcagattatat 74  Q
    |||| ||||||| ||||||||| ||||||||||||||| ||||| ||||| ||||||||    
T  47784159 atgactatccatattacaaacaatgtttagaatttgtgctgatatagttcggattatat 47784101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 52077082 - 52077016
Alignment:
Q  68 attatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccg 134  Q
    ||||||||||| ||| |||| |||||||||||| ||| || ||| |||||||| ||||||| |||||    
T  52077082 attatataatctgaactgttttaccttgaaaaatggtatttaggaggtttccggattatgtgatccg 52077016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 25140503 - 25140544
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgat 58  Q
    |||||||| ||||||||||||||||| |||||| ||||||||    
T  25140503 atgattatacatgttacaaacatgttcagaattggtgttgat 25140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 25140712 - 25140777
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||||||||||||||||| |||||| ||| |||| | |||| |||||  |||||||||    
T  25140712 atgactatccatgttacaaacatgttcagaattggtgctgatgctgttcggattacgtaatccgaa 25140777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 42497885 - 42497938
Alignment:
Q  29 gttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||||||||| | | | |||||||| ||||||| ||||||||||||||||||||    
T  42497885 gttacaaacaagctcataatttgtgctgatacaattcagattatataatccgaa 42497938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 47072146 - 47072085
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    ||||||||||||||||||   | || |||| |||||||||||||  ||||||||||||||||    
T  47072146 ttatccatgttacaaacagactcagtatttatgttgatacagttaggattatataatccgaa 47072085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 49002861 - 49002917
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaa 83  Q
    ||||||||||||| ||||||||||||| ||||| ||||  || |||||||| |||||    
T  49002861 atgttacaaacatatttagaatttgtgctgatatagtttggaatatataattcgaaa 49002917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 53668756 - 53668816
Alignment:
Q  225 gaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaa 285  Q
    ||||||||||||||||||||||  |||||||| ||||| |||  | ||||||||| |||||    
T  53668756 gaaaaacaccattccggattatataatccggattgctccgaggataattttggaaaaaaaa 53668816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 3094847 - 3094598
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttg----taccttgaaaaacggtgttcaggg 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||     |||||||||||| |||||| ||||    
T  3094847 atgattatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatcggaactgtttgttttaccttgaaaaatggtgtttaggg 3094748  T
Q  113 ggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttta 212  Q
    |||||||| ||||||||||||| ||||||||||||| || | |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |    
T  3094747 ggtttccggattatgtaatccggaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgtaactccatttttca 3094648  T
Q  213 ccctataacaaagaaaaacaccattccggattatgaaatccggaatgctc 262  Q
    ||||||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  3094647 ccctataacaaaggaaaacaccattccgaattattaaatgcggaatgctc 3094598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 8885450 - 8885738
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||  |||||| ||||||||    
T  8885450 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaatgggtgtttagggggtt 8885549  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||  |||  || || || ||    
T  8885550 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgttactcattttttcactct 8885649  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
     |||||||  |||||| |||||||||||||  ||||||||||| || ||| || |||||   ||||||||||||||| ||||||||| ||||    
T  8885650 ttaacaaaagaaaacatcattccggattatataatccggaatggtccgagggtaatttt---agaaaaaatagggcgtgcgaggaaaagcat 8885738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 44106385 - 44106145
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  44106385 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 44106286  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||| ||||  |||  || || |||||    
T  44106285 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctggaaaaatccgttactcattttttcaccct 44106186  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||  ||||||||||||  |||||| ||||||||||    
T  44106185 ttaacaaaagaaaacaccattctagattataaaatccggaa 44106145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 37248720 - 37248480
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||| | || |||| |||||||||||| |||||| ||||||||    
T  37248720 atgactatccatgtaacaaacatgtttagaatttgtgctgatacaattcggattatataattcaaactgttttaccttgaaaaatggtgtttagggggtt 37248621  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    || | ||||||||||||| ||||||||| |||||| | ||||||||| |||||||||||||||||||||| |||||| ||||| ||||||| || |||||    
T  37248620 tctggattatgtaatccggaaacatcatctaacgcgccctatttttttaagttttcggattacaaaatccagaaaaacccgtaactccatttttcaccct 37248521  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||||||| |||||||||||| ||||| ||||||||||||    
T  37248520 ataacaaaggaaaacaccattctggattttgaaatccggaa 37248480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 42280888 - 42281175
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  42280888 atgactatgcatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 42280987  T
Q  117 tccgaattatgtaatccgaaaacatc---atgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttac 213  Q
    |||| ||||||||||| | |||||||   ||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||  |||  || || ||    
T  42280988 tccggattatgtaatctggaaacatcatgatgtaacgcgctctattttttgaagttttcggattacgaaatccggaaaaatccgttactcattttttcac 42281087  T
Q  214 cctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||| ||||||| ||||||| |||||||||||||  ||| ||||||| ||  || || ||||||||  |||||||||||||||||||||||    
T  42281088 cctttaacaaaaaaaaacatcattccggattatataattcggaatgttccaagggtaattttgga--aaaaaatagggcgcgcgaggaaa 42281175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 31519898 - 31520116
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||  || ||||| ||||||| ||||||||||| |||||||||||||||| | || |||||| ||||| |||||| |||||||||||| ||||    
T  31519898 catgttacaattatatttaggatttgtgctgatacagttcggattatataatccgaactattttaccttaaaaaagggtgtttagggggtttccggatta 31519997  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  31519998 tgtaatccggaaacatcatgtaacgcgctctattttttgaagtttctggattacaaaatccggaaaaagccgtaactccatttttcaccctataacaaag 31520097  T
Q  226 aaaaacaccattccggatt 244  Q
     ||||||||||||||||||    
T  31520098 gaaaacaccattccggatt 31520116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 27927938 - 27928119
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  27927938 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaatggtgtttagggggtt 27928037  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    |||  ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||    
T  27928038 tcctgattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatccgt 27928119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 16310761 - 16310526
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||  ||| |||| |||||||||||| |||||| |||| |||    
T  16310761 atgactattcatgttacaaacatgtttagaatttgtgctgatatagttcggattatataatttgaactgttttaccttgaaaaagggtgtttagggagtt 16310662  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    || | ||| ||||||||| ||| ||||| |||||||| |||||||||||||||| |||||||||||||||||||||| | ||| ||||||| || ||||     
T  16310661 tctggattgtgtaatccggaaaaatcatctaacgcaccctattttttgaagtttccggattacaaaatccggaaaaacctgtaactccatttttcacccc 16310562  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatc 252  Q
    ||||||||| |||||||||||| |||||||||||||    
T  16310561 ataacaaaggaaaacaccattctggattatgaaatc 16310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 34853490 - 34853204
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||||| | |||| |||||||||||| |||||| || |||||    
T  34853490 atgactatccatgttacaaacatttttagaatttgtgctgatacagtttggattatataatccggactgttttaccttgaaaaagggtgtttagagggtt 34853391  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||  ||| ||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||| |||  ||  |||||||    
T  34853390 tccagatt-tgtaatccggaaacatcatgtaacgcgccctattttttaaagttttcggattacaaaatccggaaaaacccgta-ctcattttcttaccct 34853293  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttg--gaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| ||||||| |||||  |||  ||||||||| ||| || ||||||  ||| |||||||| ||||||||||||||    
T  34853292 ttaacaaaataaaacatcattccgaattatataatttggaatgctccgagtgtaattttggagaaaaaaaaatacggcgcgcgaggaaa 34853204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 21004537 - 21004312
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||  |||||| |     ||||||||||||||| | || |||||| ||||| |||||| |||| |||| || ||||    
T  21004537 catgttacaaatatgtttaggatttgtactgatacgg-----attatataatccgaactattttaccttaaaaaatggtgtttagggagttttcggatta 21004443  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| |||||| ||||||||| |  |||||||| |||||| |||||||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  21004442 tgtaatccggaaacat-atgtaacgcgccttattttttaaagtttccggattacaaaatccggaaaaatccgtaactccatttttcaccctataacaaag 21004344  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||||||||||||||||||||| ||||    
T  21004343 gaaaacaccattccggattatgaaatctggaa 21004312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 17 - 286
Target Start/End: Complemental strand, 9073666 - 9073397
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||| | ||  || |||||||| |||||| ||||||||    
T  9073666 atgactatccatgttacaaacatgtttagaatttgtgctaatacagttcgggttatataatccgaactatttcactttgaaaaaaggtgtttagggggtt 9073567  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    || | ||||||||||||| ||||||||||||||| |   ||||||||||||||| |||||||  ||||||| ||||  ||||  |||  || || |||||    
T  9073566 tctggattatgtaatccggaaacatcatgtaacgaatcttattttttgaagtttccggattaacaaatccgaaaaagtccgttactcattttttaaccct 9073467  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaa 286  Q
     |||||||  |||||| |||| || |||||  |||||||||| ||| ||  || ||||||||||||||||    
T  9073466 ttaacaaaagaaaacatcatttcgaattatataatccggaatactccgaaggtaattttggaagaaaaaa 9073397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 40994954 - 40994805
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||| ||| |||||| ||||||||    
T  40994954 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgataaagggtgtttagggggtt 40994855  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaa 166  Q
    | |  ||||||||||||| |||||||||||||||| | ||||||||||||    
T  40994854 ttcagattatgtaatccggaaacatcatgtaacgcgccctattttttgaa 40994805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 28916937 - 28916655
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||        |||||||| | ||| |||||| ||||||||    
T  28916937 atgactatccatgtaacaaacatgtttagaatttgtgctgatacagttcggattatataatc--------tgtaccttaagaaagggtgtttagggggtt 28916846  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accc 215  Q
    ||||  |||||||||||  ||||||||| |||||| | |||||||||||||||| |||||||||||||||||||||| ||||  | ||||| ||| ||||    
T  28916845 tccggtttatgtaatccagaaacatcatttaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgttac-ccattttttcaccc 28916747  T
Q  216 tataacaaagaaaaacaccat------tccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    | |||||||  |||||| |||      ||||||||||  |||||||||||||| |||| | ||||||  | |||||||||| ||||||||||||    
T  28916746 tttaacaaaagaaaacatcattccggatccggattatataatccggaatgctccgagaataattttg--aaaaaaaataggacgcgcgaggaaa 28916655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 14164054 - 14164162
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| |||||| |  || ||    
T  14164054 atgactatccatgttacaaacatgtttagaatttgtgctgatacatttcagattatataatccgaactgttttaccttgaaaaagggtgtttattggatt 14164153  T
Q  117 tccgaatta 125  Q
    |||||||||    
T  14164154 tccgaatta 14164162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 40392698 - 40392526
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || || | |||||||||  ||||||||| | ||    
T  40392698 atgactatccatgttacaaacatgtttagaatttgtgctgatacagtacagattatataatccgaactgtttttcccttgaaaacgggtgttcagagagt 40392599  T
Q  116 ttccgaattatgtaatccg-aaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
     | || ||||| | ||||| |||| |||| || || | | ||||||||||||||||| |||||| ||||||||    
T  40392598 gttcggattatatcatccgaaaaaaatcaagtgacacgccctattttttgaagtttttggattataaaatccg 40392526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 4259632 - 4259788
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaat-gttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |  || | |||||||||| |||||| |||||||    
T  4259632 atgactatcaatgttacaaacatgcttagaatttgtgctgatacagttcagattatataatccgaattatttttcccttgaaaaatggtgtttagggggt 4259731  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacacta-ttttttgaagtttt 171  Q
       | |||||| ||||||||||| |||| | ||| | | ||| ||||||||||||||    
T  4259732 gctcaaattatataatccgaaaaaatcaaggaacacgccctatttttttgaagtttt 4259788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 17119882 - 17120053
Alignment:
Q  23 atccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaat-gttgtaccttgaaaaacggtgttcagggggtttccga 121  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| | ||| | |  ||||||| |||||| | ||||| | |      
T  17119882 atccatgttacaaacatatttagaatttgtgctgatacaattcagattatataatccgaactggttttccaatgaaaaatggtgtttaaggggtgttcag 17119981  T
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    ||||| ||| ||||||| ||||  || ||| | | |||||||||||||||||||||| | |||||| |||||    
T  17119982 attatataaaccgaaaaaatcaaatagcgcgcccaattttttgaagttttcggattatataatccgaaaaaa 17120053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 36404257 - 36404391
Alignment:
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataac 221  Q
    ||||| ||||||||||| |||||||||| | | |||||||||||  ||||||||||||||||||||||| || ||||| |||  || || ||||| ||||    
T  36404257 attatataatccgaaaa-atcatgtaacacgccctattttttgagattttcggattacaaaatccggaataatccgtaactcattttttcaccctttaac 36404355  T
Q  222 aaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||  |||| |||||||||||||| ||||||||||    
T  36404356 aaagggaaactccattccggattataaaatccggaa 36404391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 7971099 - 7971234
Alignment:
Q  122 attatgtaatcc-gaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataa 220  Q
    |||||||||||| |||||||||| ||| |||   ||||||| |||||||| | |||||||||||||||||||| ||||| |||| || || |||||||||    
T  7971099 attatgtaatccagaaaacatcacgtagcgcgtcctatttt-tgaagtttccagattacaaaatccggaaaaatccgtaactccgtttttcaccctataa 7971197  T
Q  221 caaagaaaaacaccattccggattatgaaatccggaa 257  Q
    | ||| ||||| ||||||  |||||||||||| ||||    
T  7971198 cgaaggaaaacgccattctagattatgaaatctggaa 7971234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 36165840 - 36165900
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  36165840 tatccatgttacaaacatgtttacaatttgtgctgatacagttcggattatataatccgaa 36165900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 41530727 - 41530595
Alignment:
Q  122 attatgtaatccgaaaaca-tcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataa 220  Q
    ||||||||||| ||||| | ||||||||||| | |||||||||||  ||| ||||||||||||| |||||||| ||||| |||  || |  ||||| |||    
T  41530727 attatgtaatctgaaaaaaatcatgtaacgcgccctattttttgagatttccggattacaaaattcggaaaaatccgtaactcatttttccaccctttaa 41530628  T
Q  221 caaagaaaaacaccattccggattatgaaatcc 253  Q
    ||||| |||||| ||||||||||||| ||||||    
T  41530627 caaaggaaaacatcattccggattataaaatcc 41530595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 28423577 - 28423523
Alignment:
Q  23 atccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataat 77  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  28423577 atccatgttacaaacatgtttagaatttgtagtgatgcagttcagattatataat 28423523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 35676627 - 35676711
Alignment:
Q  109 agggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    ||||||| | || ||||||||||||| ||| ||||| || ||| | |||||||||| ||||| ||||||||||||||||||||||    
T  35676627 agggggtgttcggattatgtaatccggaaaaatcatatagcgcgccctattttttgtagtttccggattacaaaatccggaaaaa 35676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 39093660 - 39093605
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  39093660 atgttacaaacatgcttataatttatgttgatacatttcagattatataatccgaa 39093605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 11698313 - 11698383
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||| ||||||||||| ||||||| ||||||||| || |||||||||||  ||||||||||||||| ||||    
T  11698313 atgactatccatgttaaaaacatgcttagaatttctgctgatacagttcgaattatataatccgaactgtt 11698383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 7981671 - 7981618
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatata 75  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||    
T  7981671 tatccatgttacaaacatgttcaaaatttgtgttggtacagttcagattctata 7981618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 11698382 - 11698451
Alignment:
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatc 185  Q
    ||||| ||||||||||||| |||||||||||||| |    ||||||||||||||| ||||||||||||||    
T  11698382 ttccggattatgtaatccggaaacatcatgtaacacgtcttattttttgaagtttccggattacaaaatc 11698451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 303
Target Start/End: Original strand, 27928298 - 27928380
Alignment:
Q  219 aacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||| ||||||| |||||| ||||||  |||||||||||||| ||| || ||||| ||  |||||||||||||||||||||||    
T  27928298 aacaaaaaaaaacatcattcccgattatataatccggaatgctccgagggtaattttaga--aaaaaatagggcgcgcgaggaaa 27928380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 36317958 - 36317884
Alignment:
Q  17 atgattatccatgttacaaa----catgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||||||    |||||| | |||||||| | |||||||||||||||||||||||||| ||||    
T  36317958 atgattatccatgttacaaattaacatgttcacaatttgtgctaatacagttcagattatataatccgaactgtt 36317884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 7982530 - 7982478
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatataatcc 79  Q
    |||||||||||||||| | ||||||||  ||||||||||||||||||||||||    
T  7982530 atgttacaaacatgttcaaaatttgtgccgatacagttcagattatataatcc 7982478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 40994786 - 40994696
Alignment:
Q  212 accctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||||| |||||||  |||||| |||||||||||||  ||||||||| |||| ||| || ||||||||| |||||||||| ||| ||||||||    
T  40994786 accctttaacaaaagaaaacatcattccggattatataatccggaaagctccgagggtaattttggaa-aaaaaataggacgcacgaggaaa 40994696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 1374097 - 1374032
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||| ||||||||||| ||| |||||||| ||||| ||||| ||||| |||||||||| ||||    
T  1374097 tatccatattacaaacatgcttataatttgtgatgatatagttcggattacataatccgaattgtt 1374032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 9845555 - 9845490
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| |||||||||||||||||||||||||||| ||| |||  |||||  |||||| |||||||||    
T  9845555 atgagtatccatgttacaaacatgtttagaattggtgctgacgcagtttggattatgtaatccgaa 9845490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 773038 - 773090
Alignment:
Q  251 tccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||||||||| ||| || ||||||||| |||||||||||||| ||||||||    
T  773038 tccggaatgctccgagggtaattttggaaaaaaaaatagggcgcacgaggaaa 773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 5196133 - 5196057
Alignment:
Q  225 gaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||||| |||||||||||||  |||| ||| ||||| |||| | ||||| |||  ||||||||||||||||||||||    
T  5196133 gaaaaacatcattccggattatataatctggattgctccgagaataattttagaa--aaaaatagggcgcgcgaggaaa 5196057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 32504304 - 32504363
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccg 80  Q
    |||| |||||||||||||| || | |||||||| ||||| |||||| |||||||||||||    
T  32504304 ttatacatgttacaaacatattcaaaatttgtgctgatatagttcatattatataatccg 32504363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 36980731 - 36980689
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgata 59  Q
    |||||||||||||||||||||||||| | |||||||| |||||    
T  36980731 atgattatccatgttacaaacatgttcataatttgtgctgata 36980689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 10833512 - 10833577
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||||||||||||||||| |||||| ||| || | |||| ||||||||  ||||||||    
T  10833512 atgactatccatgttacaaacatgttcagaattggtgctggtgcagtccagattatgaaatccgaa 10833577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 33472440 - 33472379
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatc 78  Q
    |||| ||||||||||||||||||||| |||||| ||| |||| |||||  |||||| |||||    
T  33472440 atgactatccatgttacaaacatgttcagaattggtgatgatgcagtttggattatgtaatc 33472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 40328053 - 40328004
Alignment:
Q  23 atccatgttacaaacatgtttagaatttgtgttgatacagttcagattat 72  Q
    ||||||||||||||||||||||| |||| || ||||||| |||| |||||    
T  40328053 atccatgttacaaacatgtttagtatttatgctgatacaattcaaattat 40328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 9494 - 9756
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||| |||| ||| |||||||| |||||||||||||||    
T  9494 atgactatccatgttacaaacatgtatagaatttatgctgatacagttcggattatataatccgaactgttttactttgaaaaagggtgttcagggggtt 9593  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    | || ||||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||||||| |||||||| ||||| ||| ||| || |||||    
T  9594 ttcggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaattcggaaaaacccgtaactctatttttcaccct 9693  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaa 279  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||| ||| || |||||||||    
T  9694 ataacaaaggaaaacacaattccgaattatgaaatccggaatgctccgagggtaattttggaa 9756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 22 - 257
Target Start/End: Original strand, 34162724 - 34162959
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccga 121  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||| |||||||||||| |||||| ||||||||||||     
T  34162724 tatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgtt-taccttgaaaaagggtgtttagggggtttccgg 34162822  T
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccgg-aaaaagccgtagctccattctttaccctataa 220  Q
    ||||||||||||| ||||||||| |||| | | |||||||||||||||| ||||||||||||||||| ||||| ||| | ||||||| || |||||||||    
T  34162823 attatgtaatccggaaacatcatctaacacgccctattttttgaagtttccggattacaaaatccggaaaaaacccgcaactccatttttcaccctataa 34162922  T
Q  221 caaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||| |||||||||||||||||||||||||||||||    
T  34162923 caaaggaaaacaccattccggattatgaaatccggaa 34162959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 308
Target Start/End: Complemental strand, 42546129 - 42545840
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||| | ||||||||    
T  42546129 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgcttagggggtt 42546030  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    | || || |||| ||||| ||||||||||||||||   |||||||||||||||| |||||||||||||||||||||| ||||   | |||| || |||||    
T  42546029 ttcggatcatgttatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccggaaaaatccgt-tattcatttttcaccct 42545931  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
     |||||||  | ||||||||||||||||||  |||| ||||||||| ||| || ||||||||| ||||||||||||||||||||||| ||||    
T  42545930 ttaacaaaagataacaccattccggattatataatctggaatgctccgagggtaattttggaa-aaaaaatagggcgcgcgaggaaaggcat 42545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 18583550 - 18583778
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||| | || |||||| ||||| |||||| |||||||||||| ||||    
T  18583550 catgttacaaatatgtttaggatttgtgccgatacagttcagattatataatccgaactattttaccttaaaaaaaggtgtttagggggtttccggatta 18583649  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    |||||||||||||||||||||||||| | ||||||||| |||||| | |||||||||||||||||||  ||||| || |||| || ||||||||||||||    
T  18583650 tgtaatccgaaaacatcatgtaacgcgccctatttttttaagtttccagattacaaaatccggaaaagtccgtaacttcatttttcaccctataacaaag 18583749  T
Q  226 aaaaacaccattccggattatgaaatccg 254  Q
     ||||||||||||||||||||||||||||    
T  18583750 gaaaacaccattccggattatgaaatccg 18583778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 32817608 - 32817896
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  32817608 atgactatccatgttacaaacatgtttaggatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 32817707  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    | || ||||||||||| | ||||||||||||| || | |||||||||||||||| |||||||||||||| ||||||| ||||  |||  || || |||||    
T  32817708 ttcggattatgtaatctggaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatctggaaaaacccgttactcattttttcaccct 32817807  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
     |||||||  |||||| |||||||||||||  |||||||||||||| ||| || ||||||    || |||||||||||||||||||| ||||    
T  32817808 ttaacaaaagaaaacatcattccggattatataatccggaatgctccgagggtaattttg---aaataaatagggcgcgcgaggaaaggcat 32817896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 33611416 - 33611643
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || |||||| ||||| |||||| |||||||||||  ||||    
T  33611416 catgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttaccttaaaaaagggtgtttagggggtttccagatta 33611515  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| |  ||||||||||||| ||||| ||||| ||||||| || ||||||||||||||    
T  33611516 tgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccaaattacaaaatccgaaaaaatccgtaactccatttttcaccctataacaaag 33611615  T
Q  226 aaaaacaccattccggattatgaaatcc 253  Q
    ||||||||||||| ||||||||||||||    
T  33611616 aaaaacaccattctggattatgaaatcc 33611643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 41584662 - 41584929
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttc-----agattatataatccgaaatgttgtaccttgaaaaacggtgttcagg 111  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||      |||||||||||||||| || | |||||||||||| | |||| |||    
T  41584662 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattggattatataatccgaactgatttaccttgaaaaaggatgtttagg 41584761  T
Q  112 gggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt 211  Q
    ||||||||| ||||||||||||||||||||||||||||   | ||| |||||||| ||| ||||||||||||||| |||||| ||||| || |||| ||     
T  41584762 gggtttccggattatgtaatccgaaaacatcatgtaacatgccctagtttttgaaatttccggattacaaaatccagaaaaacccgtaacttcatttttc 41584861  T
Q  212 accctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaa 279  Q
    |||||||||||||  ||||||||||||| |||||||||||||| |||||||||| ||| |||||||||    
T  41584862 accctataacaaaagaaaacaccattcctgattatgaaatccgaaatgctctgaaagtaattttggaa 41584929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 17000540 - 17000304
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| | || |||| |||||||||||| |||||| ||||||||    
T  17000540 atgactatccatgttacaaacatgtttagaatttgtgctgatacagctcagattatataattcaaactgttttaccttgaaaaatggtgtttagggggtt 17000441  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||  ||||||||| |||||  | ||||| ||||| |||| || ||||||||||||||||||| ||||| ||||||| || |||||    
T  17000440 tccggattatgtaatccagaaacatcatctaacgtgccctattatttgatgtttccgaattacaaaatccggaaaaa-ccgtaactccatttttcaccct 17000342  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  17000341 ataacaaaggaaaacaccattctggattatgaaatccg 17000304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 301
Target Start/End: Original strand, 40650672 - 40650958
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||| |||| |||||||||||| |||||| | ||||||    
T  40650672 atgattatccatgttacaaacatggttataatttgtgctgatacagttcagatcatataatccgaactgttttaccttgaaaaatggtgtttaaggggtt 40650771  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accc 215  Q
    |||| ||||||||||||  |||||||||||||| | | |||||||||||||||| ||||||||||| |||| ||||| ||||  |||  || ||| || |    
T  40650772 tccggattatgtaatccagaaacatcatgtaacacgccctattttttgaagtttccggattacaaattccgaaaaaatccgttactcatttttttcacgc 40650871  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttgg-aagaaaaaatagggcgcgcgagga 301  Q
    | |||||||  ||||||||||||||||||||  ||| |||||||||| ||  || ||||||| || |||||||||||||||||||||    
T  40650872 tttaacaaaagaaaacaccattccggattatataattcggaatgctccgaaggtaattttggaaaaaaaaaatagggcgcgcgagga 40650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 23442891 - 23442660
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||||||||  |||||||||||||||| | || |||||| ||||| | ||||  ||||||||||||||||    
T  23442891 catgttacaaatatgtttaggatttgtgctgatacagtttggattatataatccgaactattttaccttaaaaaaagatgtttggggggtttccgaatta 23442792  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    | ||||||| |||||||||||||||| | |||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| || ||| ||||||||||    
T  23442791 tataatccggaaacatcatgtaacgcgccctattttttgaagtttccagattataaaatccggaaaaatccgtaactccatttttcaccttataacaaag 23442692  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     |||||| |||||||||| |||||||||||||    
T  23442691 gaaaacatcattccggataatgaaatccggaa 23442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 304
Target Start/End: Complemental strand, 49677645 - 49677368
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||| |||||||||||||| ||||||||| || ||||||||||| |||||||||||||||| |||| |||||||||||  |||||| ||||||||    
T  49677645 atgactatctatgttacaaacatggttagaatttatgctgatacagttcggattatataatccgaactgttttaccttgaaaaggggtgtttagggggtt 49677546  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    || | ||||||||||||| |||||||||||||||| | |||||||||||||||| | |||||||||||           |||  |||  || || |||||    
T  49677545 tctggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaat----------tcgttactcattttttcaccct 49677456  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaat 304  Q
     |||||||  ||||||||||||||||||||  |||||||||||||| ||| || ||||| ||| ||||||||||||||||||||||||    
T  49677455 ttaacaaaagaaaacaccattccggattatataatccggaatgctccgagggtaattttagaaaaaaaaatagggcgcgcgaggaaat 49677368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 40907931 - 40908224
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacctt-gaaaaacggtgttcagggggt 115  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| ||||||  ||||| |||||| |||||||    
T  40907931 atgattatccatgttacaaacatgtttagaatttgtgctgatacagttcaga-tatataatccgaactgttttaccttaaaaaaagggtgtttagggggt 40908029  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
    || || |||||||||||||||||||||||||| | | | | |||||||||||||| |||||| |||||| |  ||||| ||||  |||  || || ||||    
T  40908030 tttcggattatgtaatccgaaaacatcatgtagcacgcccaattttttgaagtttccggattgcaaaattctaaaaaatccgttactcattttttcaccc 40908129  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaa--gaaaaaatagggcgcgcgaggaaatgcat 308  Q
    | |||||||  ||||||||||| |||||||| ||||| |||||| || |||||| |||||| ||   |||||| |||||||||||| ||| ||||    
T  40908130 tttaacaaaagaaaacaccatttcggattataaaatctggaatgatccgagagtaattttgaaaagaaaaaaaaagggcgcgcgagaaaaagcat 40908224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 49786421 - 49786191
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| | |||||| ||||||| ||||||||||  |||||||||||||||| | || || ||| ||||| ||||||  ||||||||||| ||||    
T  49786421 catgttacaaataagtttaggatttgtgctgatacagttaggattatataatccgaactattttatcttaaaaaagggtgttt-gggggtttccggatta 49786323  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| ||||||||||||||||   ||||||||| ||||||||||||| ||||||||||||||| || || ||||||| || ||||||||| ||||    
T  49786322 tgtaatccggaaacatcatgtaacgcgtcctattttttaaagttttcggattgcaaaatccggaaaaatccataactccatttttcaccctataataaag 49786223  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     ||||||| ||||| |||||||||||||||||    
T  49786222 gaaaacacaattccagattatgaaatccggaa 49786191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 32542555 - 32542328
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||| | || ||||||   ||| |||||| ||||||||    
T  32542555 atgactatacatgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttacctt---aaagggtgtttagggggtt 32542459  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    || | ||||||||||||| |||||||||||||||||| ||||||||||||| || |||||||||||||          ||||| ||||||| || |||||    
T  32542458 tctggattatgtaatccgtaaacatcatgtaacgcaccctattttttgaagattccggattacaaaat----------ccgtaactccatttttcaccct 32542369  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    | ||||||| |||||||||||||||||||||||||||||||    
T  32542368 acaacaaaggaaaacaccattccggattatgaaatccggaa 32542328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 44573094 - 44573269
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||| | || |||||||||||| || ||| | ||| ||    
T  44573094 atgactattcatgttacaaacatgtttataatttgtgct-atacagttcagattatataatccgaactattttaccttgaaaaaaggagtttaagggatt 44573192  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| |||||    
T  44573193 tccggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgaaaaaa 44573269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 15069838 - 15070009
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttca-gggggt 115  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||| |||| || ||||||||| |||||| | ||||||    
T  15069838 atgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatctgaactgttttatcttgaaaaatggtgtttaggggggt 15069937  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    ||||| ||||| ||||||| |||||||||||||| |   |||||||||||||||| ||||||||||||||||    
T  15069938 ttccggattatataatccggaaacatcatgtaacacgtcctattttttgaagtttccggattacaaaatccg 15070009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 45046847 - 45047028
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaa-acggtgttcagggggt 115  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| | || ||| |||||||   |||||| |||||||    
T  45046847 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatacaatccgaactattttacattgaaaagggggtgtttagggggt 45046946  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgt 198  Q
    ||||| |||||||||| || ||||||||||||| |  | || |||||||||||||||||||||||||||||||||||| ||||    
T  45046947 ttccggattatgtaattcggaaacatcatgtaatg-gccctcttttttgaagttttcggattacaaaatccggaaaaatccgt 45047028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 303
Target Start/End: Complemental strand, 38885370 - 38885117
Alignment:
Q  36 acatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccga 135  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| ||||||||||| |     
T  38885370 acatgtttagaatttgtgctgatacagttcggattatataatccgaaatgttttaccttgaaaaagggtgtttaaggggtttccggattatgtaatctg- 38885272  T
Q  136 aaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacacca 235  Q
    |||||||||||||| | | || |||||| |||| |           |||||||||||| | ||  |||  || || ||||| |||||||  |||||||||    
T  38885271 aaacatcatgtaacacgccctctttttttaagtgt-----------aatccggaaaaatctgttactcattttttcaccctttaacaaaagaaaacacca 38885183  T
Q  236 ttccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||||||||  |||||||||||||| ||  || ||||||||  |||||||||||||||||||||||    
T  38885182 ttccggattatataatccggaatgctccgaaggtaattttgga--aaaaaatagggcgcgcgaggaaa 38885117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 7011372 - 7011195
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||| | || |||||||||||| | |||| ||||||||    
T  7011372 atgactatccatgttagaaacatgtttagaatttttgctgatacagttcggattatataatccgaactattttaccttgaaaaatgatgtttagggggtt 7011273  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacac-tattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    | || ||||  | || || |||||||||||||||| | | | ||||||||||||| ||||||||||||||| ||||||    
T  7011272 ttcggattacatgattcggaaacatcatgtaacgcgccctttttttttgaagtttccggattacaaaatccagaaaaa 7011195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 193
Target Start/End: Original strand, 28866632 - 28866803
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggtttccg 120  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || || | |||| ||||| |||||| || |||| | |     
T  28866632 tatccatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatccgaactgtttttccctttaaaaagggtgtttagcgggtgttca 28866731  T
Q  121 aattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
     ||||||||||||| ||| |||||||| ||| | |||||||||  || || ||||||||||||||||||||||    
T  28866732 gattatgtaatccggaaaaatcatgtagcgcgccctattttttatag-ttccggattacaaaatccggaaaaa 28866803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 96 - 257
Target Start/End: Original strand, 30829542 - 30829692
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagc 195  Q
    ||||| |||||| ||||||||| || |||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||          |    
T  30829542 aaaaagggtgtttagggggttttcggattatgtaatccgaaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaat----------c 30829630  T
Q  196 cgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||| || |||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  30829631 cgtaacttcatttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaa 30829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 6223743 - 6223972
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgt-accttgaaaaacggtgttcagggggt 115  Q
    |||| |||||||||||||||||| |||| |||||||||||          |||||||||||||||| |||| | ||||||||||| | |||| | |||||    
T  6223743 atgactatccatgttacaaacatatttaaaatttgtgttg----------gattatataatccgaactgtttttaccttgaaaaaggatgtttatggggt 6223832  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactatttt-ttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttacc 214  Q
     | || |||||||||||| |||| ||||||||| || | ||||||| ||||||||||||||||  ||||| || ||||| ||||| |||  || || |||    
T  6223833 gttcggattatgtaatccaaaaaaatcatgtaatgcgctctatttttttgaagttttcggattgaaaaattcgaaaaaatccgtaactcattttttcacc 6223932  T
Q  215 ctataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    ||||||||||| ||||||| | | ||||||||||||||||    
T  6223933 ctataacaaaggaaaacacgagttcggattatgaaatccg 6223972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 286
Target Start/End: Original strand, 45567887 - 45568143
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||              ||| |||||| ||||| |||||| ||||||||    
T  45567887 atgactatccatattacaaacatgtttagaatttgtgctgatacagttcggatt--------------gttttacctttaaaaagggtgtttagggggtt 45567972  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accc 215  Q
    | || || ||||||||| |||| |||||||| ||| | |||||||||||||||| || |||||||||| |||||||| ||||  |||  || ||| ||||    
T  45567973 ttcggatcatgtaatccaaaaatatcatgtagcgcgccctattttttgaagtttccgaattacaaaattcggaaaaacccgttactcatttttttcaccc 45568072  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaa 286  Q
    | |||||||  |||| | |||||||||||||  |||||| ||||||| ||| || |||||  |||||||||    
T  45568073 tttaacaaaagaaaatatcattccggattatataatccgaaatgctccgagggtaattttaaaagaaaaaa 45568143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 52744840 - 52744930
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgtt 107  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||| |||||||||||| ||||||    
T  52744840 atgactatccatgttacaaacatgtttagcatttgtgctgatacagttcagattatttaatccgaattgttttaccttgaaaaaaggtgtt 52744930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 34006422 - 34006246
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggt 115  Q
    |||| |||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||||| ||| |||| | || |||||||| |||||| | |||||    
T  34006422 atgactatccatgttacaaacatctttaaaatttgtgctaatacaatttggattatataatctgaactgtttttcccttgaaaaagggtgtttatggggt 34006323  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaa 192  Q
     | | |||||||||||||| ||| |||||||| | | | |||||||||||| ||| ||||||| |||||||||||||    
T  34006322 gttcaaattatgtaatccggaaaaatcatgtagcccgccctattttttgaattttccggattaaaaaatccggaaaa 34006246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 43319279 - 43319429
Alignment:
Q  103 gtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagct 202  Q
    ||||| ||||||||| || ||||||||||||||||| |||||||||||| |  |||||||| |  ||| |||||||||||||||||||||| ||||| ||    
T  43319279 gtgtttagggggttttcggattatgtaatccgaaaaaatcatgtaacgcgccatatttttttagatttccggattacaaaatccggaaaaatccgtaact 43319378  T
Q  203 ccattctttaccctataacaaagaaaaacaccattccggattatgaaatcc 253  Q
    |  || || ||||| |||||||| |||||||  |||| |||||| ||||||    
T  43319379 cattttttcaccctttaacaaaggaaaacactgttccagattataaaatcc 43319429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 24471405 - 24471541
Alignment:
Q  110 gggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattct 209  Q
    |||||||| || ||||||||||||| |||||||||||||||| | |||||||| |||||||  ||||||||||||||| ||          ||||||| |    
T  24471405 gggggttttcggattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttctggattacaaaatccgtaa----------ctccatttt 24471493  T
Q  210 ttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
      |||||||||||||| |||||||||||||||||||||||||||||||    
T  24471494 gcaccctataacaaaggaaaacaccattccggattatgaaatccggaa 24471541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 24472824 - 24472995
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| ||||||||||||||||||||||| |||||||| | ||| ||||| |||||||||||||||| || || | |||||||||| |||| | | ||| |    
T  24472824 atgactatccatgttacaaacatgtttaaaatttgtgctaatatagttcggattatataatccgaattgtttttcccttgaaaaagggtgattaagggat 24472923  T
Q  116 ttccgaattatgtaatccg--aaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatc 185  Q
     |  | ||| | ||||| |  |||| |||| ||| ||||| |||||||||||||||||||||||| ||||||    
T  24472924 gttaggattctataatctgaaaaaaaatcaagtagcgcaccctattttttgaagttttcggattataaaatc 24472995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 27794903 - 27794780
Alignment:
Q  130 atccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaa 229  Q
    ||||||||| ||||||||| || | |||||||| ||  |||||||||||||||||| | ||||| || || |||  || || |||||||||||||| |||    
T  27794903 atccgaaaaaatcatgtaaagcgccctattttt-gagattttcggattacaaaatctgaaaaaatccataactcattttttcaccctataacaaaggaaa 27794805  T
Q  230 acaccattccggattatgaaatccg 254  Q
    |||||| | ||||||||||||||||    
T  27794804 acaccagttcggattatgaaatccg 27794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 26723494 - 26723649
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggtttccgaatt 124  Q
    ||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||  | || | |||| ||||| |||||| ||||||| | || |||    
T  26723494 catgttacaaacatgttttaaatttgtgctgatatagttcggattatataatccgaaccgtttttcccttaaaaaagggtgtttagggggtgttcggatt 26723593  T
Q  125 atgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatcc 186  Q
    |||     || ||| |||||||| | | | |||||||||||||||| |||||||||||||||    
T  26723594 atg-----cggaaaaatcatgtagc-cgccctattttttgaagtttccggattacaaaatcc 26723649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 27794993 - 27794904
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgt 106  Q
    |||| |||| |||||| ||||||||||| |||||| | ||||||||||||||||||||||| |||| | || | |||||||||| |||||    
T  27794993 atgactatctatgttataaacatgtttaaaatttgcgctgatacagttcagattatataattcgaactatttttccttgaaaaagggtgt 27794904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 286
Target Start/End: Original strand, 52744931 - 52745083
Alignment:
Q  134 gaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacac 233  Q
    ||||| |||||||| ||| | |||||||||||||||||| ||||||||||| |||||||| ||||  |||  || || || || |||||||  |||| |     
T  52744931 gaaaatatcatgtagcgcgccctattttttgaagttttcagattacaaaattcggaaaaatccgttactcattttttcacactttaacaaaagaaaatat 52745030  T
Q  234 cattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaa 286  Q
    |||||  ||||||  |||||||||||||| ||| || |||||| || ||||||    
T  52745031 cattctagattatataatccggaatgctccgagggtaattttgaaaaaaaaaa 52745083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 45907451 - 45907378
Alignment:
Q  235 attccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    |||||||| |||  |||||||||||||||||  ||  |||||||| ||||||||||||||||||||||| ||||    
T  45907451 attccggaatatataatccggaatgctctgatggtatttttggaaaaaaaaatagggcgcgcgaggaaaggcat 45907378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 3561337 - 3561397
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| |||||||||||||||| | |||||||| ||||||||||| ||||||||||| ||||    
T  3561337 tatctatgttacaaacatgttcataatttgtgctgatacagttcggattatataattcgaa 3561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 26230208 - 26230150
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccg 80  Q
    |||||||||||||| || | |||||| ||||||||||||||||| | ||||||||||||    
T  26230208 tatccatgttacaagcaagattagaacttgtgttgatacagttcgggttatataatccg 26230150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 890672 - 890611
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    ||||||||||||||||||   |||||||||||| ||||||| ||| ||| ||||||||||||    
T  890672 ttatccatgttacaaacagacttagaatttgtgctgatacatttcggataatataatccgaa 890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 800878 - 800969
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    ||||| |||||| ||||||| | || ||| | ||||||||||| ||||  ||| || | |||||||||||  ||||||||||||||||||||    
T  800878 aaaaatggtgtttagggggtgttcggattctataatccgaaaaaatcaaataaagcgccctattttttgagattttcggattacaaaatccg 800969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 5210305 - 5210346
Alignment:
Q  46 aatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||||| ||||||| ||||||||||||||||| |||||||    
T  5210305 aatttgtgctgatacatttcagattatataatccaaaatgtt 5210346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 6e-74; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 23406958 - 23406718
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||| |||||||||||| |||||| ||||||||    
T  23406958 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgttttaccttgaaaaatggtgtttagggggtt 23406859  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||  ||||||||  |||||| | |||||||||||||||| |||||||| |||| ||||||||  |||| ||||||| || |||||    
T  23406858 tccggattatgtaatccagaaacatcaactaacgcgccctattttttgaagtttccggattacgaaattcggaaaaactcgtaactccatttttcaccct 23406759  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  23406758 ataacaaaggaaaacaccattccggattacgaaatccggaa 23406718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 5699727 - 5699480
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaat-------gttgtaccttgaaaaacggtgttca 109  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| |||||       ||  |||||||||||| |||||| |    
T  5699727 atgactatccatgttacaaacatatttagaatttgtgttaatacagttcggattatataatctgaaatctgaactgtattaccttgaaaaagggtgttta 5699628  T
Q  110 gggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattct 209  Q
    ||||||||||| ||||||||||||| |||||||||||||||| | ||||||||| |||||| ||||||||||||| || ||||| ||||| ||||||| |    
T  5699627 gggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttcaagtttccggattacaaaattcgaaaaaacccgtaactccatttt 5699528  T
Q  210 ttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||    
T  5699527 tcaccctataacaaaggaaaacaccattccggattatgaaatccggaa 5699480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 298
Target Start/End: Complemental strand, 17264564 - 17264292
Alignment:
Q  25 ccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatt 124  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||| |||||| |||||||||||| |||    
T  17264564 ccatgttgcaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactattttaccttgaaaaagggtgtttagggggtttccggatt 17264465  T
Q  125 atgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaa 224  Q
    |||||||||| |||||||||||||||| | |||||||||||||||| | |||||||||||||||||||| ||||  |||  || || ||||| |||||||    
T  17264464 atgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaatccggaaaaatccgttactcattttttcaccctgtaacaaa 17264365  T
Q  225 gaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcga 298  Q
      |||||| ||||| |||| ||  |||||  ||||||| ||  || ||||||||| ||||||||||||||||||    
T  17264364 agaaaacatcattcaggatcatataatccaaaatgctccgaaggtaattttggaa-aaaaaatagggcgcgcga 17264292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 2813222 - 2813463
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||| ||||||| ||| |||||||||||||||| ||||||||||| ||||||||| ||||||  ||| |||||||||||| |||||| ||||||||    
T  2813222 atgactattcatgttaaaaatatgtttagaatttgtggtgatacagttcggattatata-tccgaaccgttttaccttgaaaaagggtgtttagggggtt 2813320  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaa--atccggaaaaagccgtagctccattctttacc 214  Q
    |||| ||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||||||||  ||||||||||| | ||| ||||||| || |||    
T  2813321 tccggattatgtaatccggaaacatcatgtaacacaccttattttttgaagtttccggattacaaaatatccggaaaaatctgtaactccatttttcacc 2813420  T
Q  215 ctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||| |||| |||||||||||||| ||||||||||||||||    
T  2813421 ctataataaaggaaaacaccattccgaattatgaaatccggaa 2813463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 14587557 - 14587841
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  14587557 atgactatccatgttacaaacatgtttagaatttgtgccgatacagttatgattatataatccgaactgttttaccttgaaaaatggtgtttagggggtt 14587656  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |  | ||||||||||| | |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| || |  |||  || || |||||    
T  14587657 tatggattatgtaatcaggaaacatcatgtaacgcgccctattttttaaagttttcggattacaaaatccggaaaaatcccttactcattttttcaccct 14587756  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||| || ||||| ||||||  |||||||||||||| |||  | || || ||  |||||||||||||||||||||||    
T  14587757 ttaacaaaagaaaatacaattccagattatataatccggaatgctccgaggataatattaga--aaaaaatagggcgcgcgaggaaa 14587841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 4508299 - 4508539
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| | |||| ||||| ||    
T  4508299 atgactatccatattacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttaccttgaaaaaagttgtttaggggatt 4508398  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||| ||||||| |||||||||||||| | | ||| |||||||| |||  |||||| |||||||||||||| ||||  |||  || || |||||    
T  4508399 tccggattatataatccggaaacatcatgtaacacgccctaatttttgaaatttctggattataaaatccggaaaaatccgttactcattttttcaccct 4508498  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||  |||||||||||| ||||||| ||||||||||    
T  4508499 ctaacaaaagaaaacaccattctggattataaaatccggaa 4508539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 32035261 - 32035038
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||||||| |||||||| ||||||| ||||||||     ||||||||||||||| | || |||||| ||||| |||||| |||||||||||| ||||    
T  32035261 catgttacaaatatgtttaggatttgtgctgatacag-----attatataatccgaactattttaccttaaaaaagggtgtttagggggtttccggatta 32035167  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || | | |||||||||     
T  32035166 tgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatccgtaactccatttttcatcatataacaaaa 32035067  T
Q  226 aaaaacaccattccggattatgaaatccg 254  Q
     |||||| |||||| ||||||||||||||    
T  32035066 gaaaacatcattccagattatgaaatccg 32035038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 3717280 - 3717520
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||  ||||| ||| ||||    
T  3717280 atgactatccatgttacagacatgtttagaatttgtgatgatacagttcggattatataatccgaactgttttaccttgaaaaattgtgtttaggaggtt 3717379  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||  ||||| ||||||| |||||||||||||||| | ||| |||||||||||| ||||||||||||| |||||||  || |  |||  || || |||||    
T  3717380 tccagattatataatccggaaacatcatgtaacgcgccctaatttttgaagtttccggattacaaaattcggaaaagcccattactcattttttcaccct 3717479  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||  ||||||||||||  |||||| ||||||||||    
T  3717480 ttaacaaaagaaaacaccattcaagattataaaatccggaa 3717520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 72 - 303
Target Start/End: Complemental strand, 7412934 - 7412704
Alignment:
Q  72 tataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagtttt 171  Q
    ||||||||| | |||| |||||||||||| |||||| ||||| |||| || |||||||||||| |||||||||||||| | | ||||||||||||||||     
T  7412934 tataatccggagtgttttaccttgaaaaagggtgtttaggggttttcgga-ttatgtaatccggaaacatcatgtaacacgccctattttttgaagtttc 7412836  T
Q  172 cggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtga 271  Q
    |||||||||||||||||||||| ||||  |||  || || ||||| |||||||  |||||| |||||| ||||||  |||||||||||||| ||| || |    
T  7412835 cggattacaaaatccggaaaaacccgttactcattttttcaccctttaacaaaagaaaacatcattccagattatataatccggaatgctccgagggtaa 7412736  T
Q  272 ttttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||||| || ||||||||||| |||||||||||    
T  7412735 ttttgaaaaaaaaaatagggtgcgcgaggaaa 7412704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 1945527 - 1945764
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||| |||| |  ||||||||| || ||| |||||  |    
T  1945527 atgactatccatgttacaaacatgtttagaatttgtgccgatacagttcggattatataatctgaattgttttcacttgaaaaatggggtttaggggtgt 1945626  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    || | ||||| ||||||| |||  | ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||  || || |||||    
T  1945627 tcag-attatataatccggaaaatttatgtaacgcaccctagtttttgaagttttcggattacaaaatccggaaaaatccgtaactcattttttcaccct 1945725  T
Q  217 ataac-aaagaaaaacaccattccggattatgaaatccg 254  Q
     |  | ||||||||||||||||||||||||| |||||||    
T  1945726 ttgtcaaaagaaaaacaccattccggattataaaatccg 1945764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 33413402 - 33413583
Alignment:
Q  75 aatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcgg 174  Q
    |||||||| |||| |||||||||||| | |||| |||||||||||  ||||||||||| | |||||||||||||||| | ||||||| |||||||| |||    
T  33413402 aatccgaactgttttaccttgaaaaaggttgtttagggggtttccagattatgtaatctggaaacatcatgtaacgcgccctatttt-tgaagtttccgg 33413500  T
Q  175 attacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||||||| | ||||||  |||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  33413501 attacaaaattcagaaaaattcgtaactccatttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaa 33413583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 24604369 - 24604597
Alignment:
Q  28 tgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggtttccgaattat 126  Q
    ||||||||| |||||||||||||||| ||||| |||||||||||||||||  ||| |||| | || |||||||| |||||| | ||||| | || |||||    
T  24604369 tgttacaaatatgtttagaatttgtgctgatagagttcagattatataatatgaactgtttttcccttgaaaaatggtgtttaaggggtgttcggattat 24604468  T
Q  127 gtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accctataacaaag 225  Q
    |||||||||| | |||||||||  | | ||||||||||||||||| |||||||||||| |||||||| || || |||  || ||| ||||||| ||||||    
T  24604469 gtaatccgaagaaatcatgtaagacgccctattttttgaagtttttggattacaaaattcggaaaaatccttaactcatttttttcaccctatgacaaag 24604568  T
Q  226 aaaaacaccattccggattatgaaatccg 254  Q
     ||||||||| | |||| |||||||||||    
T  24604569 gaaaacaccagttcggaatatgaaatccg 24604597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 257
Target Start/End: Complemental strand, 5639014 - 5638801
Alignment:
Q  27 atgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattat 126  Q
    |||||||| |||||||||  || |||| ||||||||||| |||||||||||||||| |||| |||||||||||| |||||| ||||  ||| | ||||||    
T  5639014 atgttacagacatgtttatgatatgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggatttttcaaattat 5638915  T
Q  127 gtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaaga 226  Q
    |||||||| |||||||||||||||| | ||||||||                 |||||||||||||| ||||| ||| ||| || ||||||||||| ||     
T  5638914 gtaatccggaaacatcatgtaacgcgccctattttt-----------------aaaatccggaaaaatccgtaactctatttttcaccctataacagagg 5638832  T
Q  227 aaaacaccattccggattatgaaatccggaa 257  Q
    |||||||||||||||||||||||||||||||    
T  5638831 aaaacaccattccggattatgaaatccggaa 5638801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 2539613 - 2539495
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||| ||||||||||  |||| ||||| |||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  2539613 atgactatccatgttacaaacatgttcagaatttgtgcggatagagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtt 2539514  T
Q  117 tccgaattatgtaatccga 135  Q
    |||  ||||||||||||||    
T  2539513 tccagattatgtaatccga 2539495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 29519432 - 29519376
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  29519432 catgttacaaacatgtttagaatttgtgctgatacagttcatattatataatccgaa 29519376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 9905276 - 9905104
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggggt 115  Q
    |||||||||||||||||||||||||||| |||||||| |||||  | |     |||||||||| || | || | || |||||  | || ||| |||||||    
T  9905276 atgattatccatgttacaaacatgtttaaaatttgtgctgatatgggt-----tatataatccaaactatttttcccttgaatgatggcgtttagggggt 9905182  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
     | || ||||||||||||| ||| |||| ||| ||| | |||||||||||| ||| || |||||||||||||||||||    
T  9905181 gttcggattatgtaatccggaaaaatcacgtagcgcgccctattttttgaaatttccgaattacaaaatccggaaaaa 9905104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 29289627 - 29289692
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||| |||||||||| ||||| | |||||||| |||||||||||||||||||||||||||| ||||    
T  29289627 tatctatgttacaaagatgttcataatttgtgctgatacagttcagattatataatccgaattgtt 29289692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 308
Target Start/End: Original strand, 21517535 - 21517764
Alignment:
Q  74 taatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcg 173  Q
    |||||| || |||| ||| |||||||| |||||| | |||||||||||||||||||||||| |||||| ||||| | | | |||||||||| |||| |      
T  21517535 taatccaaactgttttactttgaaaaatggtgtttaaggggtttccgaattatgtaatccggaaacattatgtagcacgccctattttttggagttgt-- 21517632  T
Q  174 gattacaaaatccggaaaaagccgtagctccattctttaccctataacaaa-----gaaaaacaccattccggattatgaaatccggaatgctctgagag 268  Q
            |||||||||||| ||||   ||  || || ||||| |||||||      |||||||||||| |||||||| |||||| |||||||| ||| |    
T  21517633 --------aatccggaaaaatccgttattcattttttcaccctttaacaaaagaattaaaaacaccatttcggattataaaatccagaatgctccgaggg 21517724  T
Q  269 tgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    | ||||||||| |||||||| ||| |||||| ||| ||||    
T  21517725 taattttggaaaaaaaaatatggcccgcgagaaaaggcat 21517764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 7734334 - 7734393
Alignment:
Q  28 tgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||| ||||    
T  7734334 tgttacaaacatgtttagaatttgtattgatacagttcgaattatataatctgaactgtt 7734393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 13801024 - 13801094
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||| ||| |||||||||||||||||||||||| || | ||||||||| |||||| ||||||||| ||||    
T  13801024 atgataatctatgttacaaacatgtttagaatttatgctaatacagttccgattatgtaatccgaactgtt 13801094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 34528602 - 34528551
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcaga 68  Q
    |||| ||||||||||||||||||||| | |||||||| ||||||||||||||    
T  34528602 atgaatatccatgttacaaacatgttcataatttgtgctgatacagttcaga 34528551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 14037963 - 14038029
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    |||||||||||||||| |   | |||||||||| ||||||||||| | |||||||||||||| ||||    
T  14037963 ttatccatgttacaaagagactcagaatttgtgctgatacagttcgggttatataatccgaactgtt 14038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 236956 - 236899
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatat 74  Q
    |||||| ||||||||||||||||||| | |||||||| ||||| |||||  |||||||    
T  236956 atgattttccatgttacaaacatgttcataatttgtgctgatatagttcgaattatat 236899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 45153783 - 45154070
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||| || ||||| |||||||||||| |||||||||||  || |||| |||||||||||| |||||| ||||||||    
T  45153783 atgactatccatgttacaaacatgtttataacttgtgctgatacagttcaaattatataatctaaactgttttaccttgaaaaagggtgtttagggggtt 45153882  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||||| | ||||||||||| | |||||| ||||  |||  || || |||||    
T  45153883 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaattcagaaaaacccgttactcattttttcaccct 45153982  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttgga-agaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| |||||||||||||  |||||||||||||||||| || |||||||| | |||||||||||||||||||||||    
T  45153983 ttaacaaaagaaaacatcattccggattatataatccggaatgctctgagggtaattttggagaaaaaaaatagggcgcgcgaggaaa 45154070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 26 - 257
Target Start/End: Original strand, 36948946 - 36949177
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    ||||||| ||| |||||||| ||||||| ||||||||||  ||||||||||||| || | || |||||| | ||| |||||| |||||||||||| ||||    
T  36948946 catgttataaatatgtttaggatttgtgctgatacagtttggattatataatccaaactattttaccttaacaaatggtgtttagggggtttccggatta 36949045  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaag 225  Q
    |||||||||||||||||||||||||| | |||||||||||||||| | |||||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  36949046 tgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttgcagattacaaaatccggaaaaatccgtaactccatttttcaccctataacaaag 36949145  T
Q  226 aaaaacaccattccggattatgaaatccggaa 257  Q
     |||||||||||||||||||||||||| ||||    
T  36949146 gaaaacaccattccggattatgaaatctggaa 36949177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 32187861 - 32188146
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| ||||||  |||||||    
T  32187861 atgactatccatgttacaaacatatttaaaatttgtgctgatacagttcggattatataatccgaactgttttaccttgaaaaatggtgtttcgggggtt 32187960  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accc 215  Q
    |||| ||||||||||||| |||||||||||||| | | |||||||||||||||| | ||||||||||||| |||||| ||||  |||  || ||| ||||    
T  32187961 tccggattatgtaatccggaaacatcatgtaactcgccctattttttgaagtttccagattacaaaatccagaaaaacccgttactcatttttttcaccc 32188060  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    | |||||||  |||||| |||||||||||||  |||||||||||||| ||| || ||||||  | ||||||||||||| |||||||||    
T  32188061 tttaacaaaagaaaacatcattccggattatacaatccggaatgctccgagggtaattttg--aaaaaaaatagggcgtgcgaggaaa 32188146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 25 - 303
Target Start/End: Original strand, 44465727 - 44466004
Alignment:
Q  25 ccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatt 124  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| |||| |||||||||||| |||||| |||||||||||| | |    
T  44465727 ccatgttacaaacatgtttagaatttgtgctgatacatttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggggtttccggagt 44465826  T
Q  125 atgtaatccgaaaac-atcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaa 223  Q
    |||||||||  |||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||  |||  || || ||||| ||||||    
T  44465827 atgtaatccataaactatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatccgttactcattttttcaccctttaacaa 44465926  T
Q  224 agaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |  |||||| ||||| |||||||  ||||| |||| ||| |||||| ||||||  | |||||||||||||||||||||||    
T  44465927 aagaaaacatcattctggattatataatcctgaatactccgagagtaattttg--aaaaaaaatagggcgcgcgaggaaa 44466004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 286
Target Start/End: Original strand, 17474791 - 17475062
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| || |||| ||||||||||||  ||||| ||||||||    
T  17474791 atgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatccaaactgttttaccttgaaaaattgtgtttagggggtt 17474890  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | ||||||||| |||||| |||||||||||||||||||||| ||||  |||  || || ||| |    
T  17474891 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttaaagtttccggattacaaaatccggaaaaatccgttactcattttttcacctt 17474990  T
Q  217 ataacaaagaaaaacaccatt--ccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaa 286  Q
     |||||||  ||||||  |||  |||||||||  |||||||||||||| ||| || ||||||||||||||||    
T  17474991 ttaacaaaagaaaacattattccccggattatataatccggaatgctccgagggtaattttggaagaaaaaa 17475062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 30 - 303
Target Start/End: Original strand, 41854904 - 41855167
Alignment:
Q  30 ttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgta 129  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||||||| || |||||    
T  41854904 ttacaaacatgtttagaatttgtgctgatacagttcaaattatataatccgaactgttttaccttgaaaaagggtgtttagggggtttccggatcatgta 41855003  T
Q  130 atccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaa 229  Q
    ||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||          ||||  |||  || || ||||| ||||||   |||    
T  41855004 atccggaaacatcatgtaacacaccctattttttgaagtttccggattacaaaat----------ccgttactcattttttcaccctttaacaacagaaa 41855093  T
Q  230 acaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    |||||||||||||||||  |||||||||||||| ||| || ||||||||| |||||||| ||||||||||||||    
T  41855094 acaccattccggattatataatccggaatgctccgagggtaattttggaaaaaaaaataaggcgcgcgaggaaa 41855167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 276
Target Start/End: Original strand, 33452435 - 33452694
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| |||| |||||||||||| |||||| |||| |||    
T  33452435 atgattatccatgttacaaacatgtttagaatttgtgctaatacagttcggattatataatccgaactgttttaccttgaaaaagggtgtttagggagtt 33452534  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||| ||||| |||||||||||||||| | |||||||||||||||| || |||||||||||| |||||| ||||  |||  || |  |||||    
T  33452535 tccggattatgtgatccggaaacatcatgtaacgcgccctattttttgaagtttccgaattacaaaatccagaaaaatccgttactcatttttccaccct 33452634  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttg 276  Q
     |||||||  |||||| |||| ||||||||  |||||||||| ||| ||| || ||||||    
T  33452635 ttaacaaaagaaaacatcatttcggattatataatccggaatactccgagggtaattttg 33452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 39447324 - 39447034
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||| | || |||||||||||| |||||| | ||||||    
T  39447324 atgactatccatgttacaaacatgtttagaatttgtgctgatacagtttgaattatataatccgaactattttaccttgaaaaagggtgtttatggggtt 39447225  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||  ||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| ||||  |||  || || |||||    
T  39447224 tccagattatgtaatccgaaaacatcatgtaatgcgccctattttttgaagttttcggattacaaaatccggaaaaatccgttactcattttttcaccct 39447125  T
Q  217 ataacaaagaaaaacaccattcc-----ggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| ||||||     |||||||  |||||||||||||| ||  || ||||| ||| ||||||||  |||||||||||||    
T  39447124 ttaacaaaagaaaacatcattccgttctggattatataatccggaatgctccgaaggtaattttagaa-aaaaaataaagcgcgcgaggaaa 39447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 15995105 - 15995343
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| ||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||| |||| || ||||||||| |||||| ||||||||    
T  15995105 atgactatccatgttacaaacatgtttagaatttttgctgatacagttcgaattatataatccgaactgttttagcttgaaaaagggtgtttagggggtt 15995204  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacacta-ttttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
    | || ||||||||||||| |||||||||| ||||| | ||| ||||||||||||| | |||||||||||||||||||| ||||  ||   || || ||||    
T  15995205 ttcggattatgtaatccggaaacatcatgcaacgcgccctatttttttgaagtttcccgattacaaaatccggaaaaacccgttactaattttttcaccc 15995304  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    | |||||||  |||||||||||||||||||| |||||||    
T  15995305 tttaacaaaagaaaacaccattccggattataaaatccg 15995343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 41510429 - 41510650
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaatta 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |||| |||||||||||  |||||| |||||||||||  ||||    
T  41510429 catgttacaaacatgtttagaaattgtgctgatacagttcagattatataatccggactgttttaccttgaaaaggggtgtttagggggtttccagatta 41510528  T
Q  126 tgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattcttt-accctataacaaa 224  Q
    ||||||||  |||||||||||||||| | |||||||||||||||| |||||||| ||||| ||||||| ||||  |||  || ||| ||||| | |||||    
T  41510529 tgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattacgaaatctggaaaaatccgttactcatttttttcacccttttacaaa 41510628  T
Q  225 gaaaaacaccattccggattat 246  Q
      ||||||||||| ||||||||    
T  41510629 agaaaacaccatttcggattat 41510650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 36875147 - 36874977
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||| | |||| |||||||||||| ||||||||| |||||    
T  36875147 atgactatccatgttacaaacttgtttagaatttatgctaatacagtttggattatataatccggactgttttaccttgaaaaatggtgttcagagggtt 36875048  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    |||| ||||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||||||||||    
T  36875047 tccggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccg 36874977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 42894539 - 42894369
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||| | |||| |||||||||||| |||||| ||||||||    
T  42894539 atgattatccatgttagaaacatgtttagaatttgtgctgatacagttcggaatatataatccggactgttttaccttgaaaaatggtgtttagggggtt 42894440  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    |||| ||||||||||||| ||||||||||||||||   ||||||||| |||||| ||||||| | ||||||    
T  42894439 tccggattatgtaatccggaaacatcatgtaacgcgtcctatttttttaagtttccggattatataatccg 42894369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 68 - 253
Target Start/End: Original strand, 25217834 - 25218018
Alignment:
Q  68 attatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaag 167  Q
    ||||||||||||||| |||| |||||||||||  |||||| ||||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  25217834 attatataatccgaactgttttaccttgaaaaggggtgtttagggg-tttccggattatgtaatccggaaacatcatgtaacgcaccctattttttgaag 25217932  T
Q  168 ttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatcc 253  Q
    ||| |||||||||||||||| ||||| ||||  |||  || || ||||| |||||||  |||||| |||| |||||||| ||||||    
T  25217933 tttccggattacaaaatccgaaaaaatccgttactcattttttcaccctttaacaaaagaaaacatcattgcggattataaaatcc 25218018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 34517263 - 34517026
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatg-ttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| ||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||| || || || | |||||||||| |||||| | |||||    
T  34517263 atgactatccatgttaccgacatgtttagaatttgtgctgatacagttcggattatataatccaaactgtttttcccttgaaaaatggtgtttaaggggt 34517164  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccc 215  Q
     |  | ||||||||||||||||| |||||||||||| | |||||||||||  ||||  |||||||||||||| |||||  |||| |||  || || |||     
T  34517163 atttggattatgtaatccgaaaa-atcatgtaacgcgccctattttttgagatttttcgattacaaaatccgaaaaaattcgtaactcattttttcaccg 34517065  T
Q  216 tataacaaagaaaaacaccattccggattatgaaatccg 254  Q
    |||||||||| ||||||||| | |||| |||||||||||    
T  34517064 tataacaaaggaaaacaccagttcggaatatgaaatccg 34517026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 5507581 - 5507345
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaat-gttgtaccttgaaaaacggtgttcagggggt 115  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |  || | |||| | ||| |||||| |||||||    
T  5507581 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactattttttccttaagaaaaggtgtttagggggt 5507482  T
Q  116 ttccgaattatgtaatccg--aaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttac 213  Q
     | || ||||| |||||||  |||| ||||||||||||    |||||||||||||||| |||||||||||| || ||||| | ||| |||  || || ||    
T  5507481 gttcggattatataatccgaaaaaaaatcatgtaacgcgtcttattttttgaagtttttggattacaaaattcgaaaaaatctgtaactcattttttcac 5507382  T
Q  214 cctataacaaagaaaaacaccattccggattatgaaa 250  Q
    | |||||||||| ||||||| | | ||||||||||||    
T  5507381 catataacaaaggaaaacactagttcggattatgaaa 5507345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 4268288 - 4268406
Alignment:
Q  75 aatccgaaatgttgtaccttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcgg 174  Q
    |||||| | |||| |||||||||||| |||||| | |||||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||| ||    
T  4268288 aatccggattgttttaccttgaaaaagggtgtttatggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttttgg 4268387  T
Q  175 attacaaaatccggaaaaa 193  Q
    ||||||||||||| |||||    
T  4268388 attacaaaatccgaaaaaa 4268406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 41203178 - 41203354
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtac-cttgaaaaacggtgttcagggggt 115  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||| | |||||||||| ||| |||| | | ||| ||||| |||||| | |||||    
T  41203178 atgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggtttatataatctgaactgtttttctctttaaaaagggtgtttacggggt 41203277  T
Q  116 ttccgaattatgtaatccgaaaacatcatgtaacgcacacta-ttttttgaagttttcggattacaaaatccggaaaaa 193  Q
     | || ||||||||||||  ||| || |||||  |||| ||| ||||||| ||||| ||||||||||||||||||||||    
T  41203278 gttcggattatgtaatccagaaaaattatgta--gcaccctatttttttgtagtttccggattacaaaatccggaaaaa 41203354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 38066665 - 38066834
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtacc-ttgaaaaacggtgttcagggg-g 114  Q
    |||| ||||||| |||||||||| ||||||||||||||| |||| |||| | |||||||||  ||| |||| | || |||||||  |||||| | ||| |    
T  38066665 atgactatccattttacaaacatatttagaatttgtgttaatactgttcggtttatataatatgaactgtttttcccttgaaaaggggtgtttatgggtg 38066764  T
Q  115 tttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatcc 186  Q
    |||  |  |||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  38066765 tttggg--ttatgtaatccgaaaaaatcatataacacaccctattttttgaagttttcggattataaaatcc 38066834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 9847522 - 9847657
Alignment:
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccctataac 221  Q
    |||||||||| |||||| |||||||||||| | | |||||||||  |||||||||||||||||| ||||||| | ||| |||  || || || || ||||    
T  9847522 attatgtaatacgaaaaaatcatgtaacgcgcccaattttttgagattttcggattacaaaatctggaaaaatcagtaactcattttttcactctttaac 9847621  T
Q  222 aaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||||||  ||||||| |||||| ||||||||||    
T  9847622 aaagaaaaatgccattccagattataaaatccggaa 9847657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 41204082 - 41204029
Alignment:
Q  29 gttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  41204082 gttacaaacatgttcagaatttgtgttgatacagttcagattatattatccgaa 41204029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 33367010 - 33366920
Alignment:
Q  96 aaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccg 187  Q
    ||||| |||||| ||||||||| || ||||||||||||| ||| ||||||||||||   ||  |||||||||||||||||||||||||||||    
T  33367010 aaaaaaggtgttaagggggttttcggattatgtaatccggaaatatcatgtaacgc-gtcttatttttgaagttttcggattacaaaatccg 33366920  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 25715422 - 25715285
Alignment:
Q  122 attatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagcc--gtagctccattctttaccctata 219  Q
    ||||||||||||||||| |||| ||||||| | |||| ||||||  |||| |||||||||| |||| |||||     ||| |||  || || ||||| ||    
T  25715422 attatgtaatccgaaaaaatcaggtaacgcgccctatcttttgagatttttggattacaaagtccgaaaaaaaatttgtaactcattttttcacccttta 25715323  T
Q  220 acaaagaaaaacaccattccggattatgaaatccggaa 257  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  25715322 acaaaggaaaacaccattccggattataaaatccggaa 25715285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 8388807 - 8388743
Alignment:
Q  23 atccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||| || ||||||||| ||| ||||    
T  8388807 atccatgttacaaacatctttagaatttgtgctgatacatttcggactatataatctgaactgtt 8388743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 25217767 - 25217815
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttc 65  Q
    |||| |||||||| ||||||||||||||||||||||| | |||||||||    
T  25217767 atgactatccatgctacaaacatgtttagaatttgtgctaatacagttc 25217815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 27640537 - 27640595
Alignment:
Q  249 aatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaatgcat 308  Q
    |||||||||||||| ||| ||  |||||||| ||||||||||||||||||||||| ||||    
T  27640537 aatccggaatgctccgagggtagttttggaa-aaaaaatagggcgcgcgaggaaaggcat 27640595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 34817259 - 34817212
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcaga 68  Q
    |||||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  34817259 ttatccatgttacaaacaagttcagaattggtgctgatacagttcaga 34817212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 16750420 - 16750484
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| ||||||| |||||||||| || ||||||| || |||||||||||  |||||||||||||||    
T  16750420 atgactatccatattacaaacatatt-agaatttatgctgatacagttcgaattatataatccgaa 16750484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 17766821 - 17766886
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaa 82  Q
    |||| |||| |||||||||||||||| | |||| ||||||||  |||| ||||||| |||||||||    
T  17766821 atgactatcaatgttacaaacatgttcaaaattggtgttgatgaagtttagattatgtaatccgaa 17766886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 45293776 - 45293743
Alignment:
Q  44 agaatttgtgttgatacagttcagattatataat 77  Q
    |||||||||| |||||||||||||||||||||||    
T  45293776 agaatttgtgctgatacagttcagattatataat 45293743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 27900610 - 27900666
Alignment:
Q  21 ttatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataat 77  Q
    |||||||||||| |||||   | | |||||||| |||||||||||||||||||||||    
T  27900610 ttatccatgttataaacaaactcataatttgtgctgatacagttcagattatataat 27900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 33440510 - 33440546
Alignment:
Q  26 catgttacaaacatgtttagaatttgtgttgatacag 62  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  33440510 catgtaacaaacatgttcagaatttgtgttgatacag 33440546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 34519529 - 34519561
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatt 49  Q
    |||||||||||||||||||||||||| ||||||    
T  34519529 atgattatccatgttacaaacatgttcagaatt 34519561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 141960 - 142245
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  ||   || |||||||||||| |||||| ||||||||    
T  141960 atgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatctcaacaattttaccttgaaaaagggtgtttagggggtt 142059  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaagccgtagctccattctttaccct 216  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||| | ||  |  |||| || |||||    
T  142060 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctggaaaaatctgttac-acatttttcaccct 142158  T
Q  217 ataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
     |||||||  |||||| ||||||| |||||  |||| ||||||||| ||| || ||||||||| |||||||||||||||||||||||    
T  142159 ttaacaaaagaaaacatcattccgaattatataatctggaatgctccgagggtaattttggaaaaaaaaatagggcgcgcgaggaaa 142245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 3392 - 3568
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgttgtaccttgaaaaacggtgttcagggggtt 116  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| |||| |||||||||||| |||||| | ||||||    
T  3392 atgattatcgatgttacaaacatgtttagaatttgcgccgatacagttcagattatataatccgaactgttttaccttgaaaaagggtgtttatggggtt 3491  T
Q  117 tccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaaa 193  Q
    |||| ||||||||||||| |||||||||||||||| | ||||||||||||||||   ||||||||||| || |||||    
T  3492 tccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttctagattacaaaattcgaaaaaa 3568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 303
Target Start/End: Complemental strand, 23208 - 22996
Alignment:
Q  93 ttgaaaaacggtgttcagggggtttccgaattatgtaatccgaaaacatcatgtaacgcacactattttttgaagttttcggattacaaaatccggaaaa 192  Q
    |||||||| |||||| |||||||||||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||||||    
T  23208 ttgaaaaaaggtgtttagggggtttccggattatataatccggaaacatcatgtaatgcaccctattttttgaagtttccggattataaaattcggaaaa 23109  T
Q  193 agccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttg---gaagaaaaaatag 289  Q
    | ||||  || |||| || |||||  ||||||  ||||||  ||| ||||||||  |||| ||||| ||| ||| || ||||||   ||| |||||||||    
T  23108 atccgttact-catttttcacccttcaacaaaagaaaacataattacggattatataatctggaatactccgagggtaattttgaaagaaaaaaaaatag 23010  T
Q  290 ggcgcgcgaggaaa 303  Q
    ||||||||| ||||    
T  23009 ggcgcgcgaagaaa 22996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 23264 - 23227
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgt 54  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  23264 atgactatccatgttacaaacatgtttcgaatttgtgt 23227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 8713 - 8637
Alignment:
Q  225 gaaaaacaccattccggattatgaaatccggaatgctctgagagtgattttggaagaaaaaatagggcgcgcgaggaaa 303  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||| ||||||||  ||||||||||||||| |||||||    
T  8713 gaaaaacaccattccggattatataatccggattgctccgagagtaattttgga--aaaaaatagggcgcgtgaggaaa 8637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 140612 - 140489
Alignment:
Q  175 attacaaaatccggaaaaagccgtagctccattctttaccctataacaaagaaaaacaccattccggattatgaaatccggaatgctctgagagtgattt 274  Q
    ||||||||||||||||||| || |  |||  || || ||| | |||||||  |||||| |||||||||||||  |||||| ||||||| | | || ||||    
T  140612 attacaaaatccggaaaaatcctttactcattttttcaccttttaacaaaagaaaacatcattccggattatataatccgaaatgctccgggggtaattt 140513  T
Q  275 tggaagaaaaaatagggcgcgcgag 299  Q
    ||||| |||||||||||||||||||    
T  140512 tggaa-aaaaaatagggcgcgcgag 140489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 59967 - 60028
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatc 78  Q
    |||| |||| |||||||||||||||| | |||||||| || ||||||||| |||||||||||    
T  59967 atgactatctatgttacaaacatgttcaaaatttgtgctggtacagttcatattatataatc 60028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 4533 - 4471
Alignment:
Q  17 atgattatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatcc 79  Q
    |||| |||| || ||||||||| ||| | ||||||||  ||||||||||||||||||||||||    
T  4533 atgactatctattttacaaacaggttcaaaatttgtgccgatacagttcagattatataatcc 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 8851 - 8786
Alignment:
Q  22 tatccatgttacaaacatgtttagaatttgtgttgatacagttcagattatataatccgaaatgtt 87  Q
    ||||||||||||||||| | | |  ||||||| |||||| ||||||| |||||||||| |||||||    
T  8851 tatccatgttacaaacaagctcaatatttgtgatgatacggttcagaatatataatccaaaatgtt 8786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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