View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2726_low_9 (Length: 435)
Name: NF2726_low_9
Description: NF2726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2726_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 19 - 425
Target Start/End: Complemental strand, 9909501 - 9909095
Alignment:
| Q |
19 |
atttatcagtttttcaatgaatctacagagtaaaacttggtttataataataatcggagggagtagtatcttgtactgaaactatgcaataccatttttg |
118 |
Q |
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| T |
9909501 |
atttatcagttattcaatgaatctgcaaagtaaaacttggtttataataataatcggagggagtagtatcttgtactgaaagtatgcaataccatttttg |
9909402 |
T |
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| Q |
119 |
ttagaaattttgactttaaggaaaacagtgccatcctcttcattgatagtccctgtgattgtcatgtgtgtgctgtttgttgcgttcttcaatggaggtt |
218 |
Q |
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| T |
9909401 |
ttagaaattttgactttaaggaaaacagtgccatcctcttcattgatagtccctgtgattgtcatgtgtgtgctgtttgttgcgttcttcaatggaggtt |
9909302 |
T |
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| Q |
219 |
gttctttggcaattgttgcattgaaattgatttgttgagtatgtttgctaactaaagttggactaggcaatggtgagtcatgatgggccgtagctaaaaa |
318 |
Q |
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| T |
9909301 |
gttctttggcaattgttgcattgaaattgatttgttgagtatgtttgctaactaaagttggactaggcaatggtgagtcatgatgggccgtagctaaaaa |
9909202 |
T |
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| Q |
319 |
agggtccatcaagagctcttttgctgacaacctctctgagacatttgccaaacattttccaataaacttttgggtttcttcatcatggatcttgtcaaat |
418 |
Q |
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| T |
9909201 |
agggtccatcaagagctcttttgctgacaacctctctgagacatttgccaaacattttccaataaacttttgggtttcttcatcatggatcttgtcaaat |
9909102 |
T |
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| Q |
419 |
gcctttg |
425 |
Q |
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| T |
9909101 |
gcctttg |
9909095 |
T |
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