View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2727R-Insertion-2 (Length: 838)

Name: NF2727R-Insertion-2
Description: NF2727R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2727R-Insertion-2
NF2727R-Insertion-2
[»] chr6 (27 HSPs)
chr6 (572-838)||(31248977-31249243)
chr6 (572-838)||(35201589-35201855)
chr6 (572-838)||(13883128-13883394)
chr6 (572-838)||(30974962-30975228)
chr6 (572-838)||(30981401-30981667)
chr6 (572-838)||(30987565-30987831)
chr6 (572-838)||(35208824-35209090)
chr6 (571-838)||(26887487-26887755)
chr6 (572-838)||(13878380-13878646)
chr6 (572-838)||(16785572-16785838)
chr6 (572-837)||(17695117-17695382)
chr6 (572-837)||(25466165-25466431)
chr6 (585-837)||(25941330-25941561)
chr6 (572-803)||(26084725-26084957)
chr6 (572-803)||(26064756-26064988)
chr6 (572-805)||(28241626-28241860)
chr6 (576-837)||(22343067-22343331)
chr6 (572-837)||(22352118-22352386)
chr6 (572-655)||(1230684-1230767)
chr6 (571-688)||(26642828-26642945)
chr6 (571-688)||(26748794-26748911)
chr6 (572-653)||(13467955-13468036)
chr6 (717-803)||(1230556-1230643)
chr6 (627-837)||(33215533-33215743)
chr6 (572-618)||(33215499-33215545)
chr6 (762-837)||(13467729-13467803)
chr6 (572-647)||(15533145-15533220)
[»] chr7 (21 HSPs)
chr7 (572-838)||(7069433-7069699)
chr7 (572-838)||(7074440-7074706)
chr7 (572-838)||(25405046-25405312)
chr7 (578-837)||(3320314-3320573)
chr7 (578-837)||(3325062-3325321)
chr7 (571-837)||(44512791-44513058)
chr7 (571-825)||(25351004-25351258)
chr7 (571-825)||(25356698-25356952)
chr7 (571-837)||(34547129-34547374)
chr7 (572-837)||(30246642-30246886)
chr7 (572-835)||(7464786-7465029)
chr7 (578-825)||(25409809-25410035)
chr7 (572-688)||(8378833-8378949)
chr7 (574-790)||(40946076-40946292)
chr7 (780-837)||(8378770-8378827)
chr7 (791-838)||(15541258-15541305)
chr7 (572-653)||(44144357-44144438)
chr7 (627-792)||(2120626-2120791)
chr7 (717-804)||(48457544-48457632)
chr7 (571-618)||(2120591-2120638)
chr7 (571-618)||(48457440-48457487)
[»] chr4 (24 HSPs)
chr4 (572-838)||(11853202-11853468)
chr4 (572-837)||(18586616-18586882)
chr4 (570-825)||(16488999-16489254)
chr4 (572-837)||(31300074-31300340)
chr4 (572-805)||(40636868-40637102)
chr4 (571-837)||(8528917-8529183)
chr4 (572-837)||(15316630-15316874)
chr4 (572-837)||(4556325-4556585)
chr4 (572-837)||(4884531-4884790)
chr4 (729-837)||(15830949-15831057)
chr4 (572-837)||(16689206-16689472)
chr4 (572-688)||(15311994-15312110)
chr4 (576-688)||(15830817-15830929)
chr4 (572-805)||(47868195-47868429)
chr4 (571-790)||(8631744-8631963)
chr4 (572-655)||(6764654-6764737)
chr4 (574-688)||(2485277-2485390)
chr4 (712-790)||(15312113-15312191)
chr4 (572-688)||(25699401-25699518)
chr4 (717-805)||(6764778-6764867)
chr4 (572-652)||(7050722-7050802)
chr4 (572-624)||(26086240-26086292)
chr4 (717-805)||(2485178-2485269)
chr4 (731-825)||(4569907-4569999)
[»] chr8 (15 HSPs)
chr8 (572-838)||(25684296-25684562)
chr8 (572-838)||(4812750-4813018)
chr8 (572-838)||(28327561-28327827)
chr8 (572-838)||(28332284-28332550)
chr8 (572-838)||(16752785-16753052)
chr8 (572-837)||(28895153-28895418)
chr8 (572-837)||(29555051-29555317)
chr8 (572-838)||(16757530-16757776)
chr8 (572-837)||(9021373-9021638)
chr8 (572-837)||(590466-590710)
chr8 (572-837)||(21033520-21033786)
chr8 (571-805)||(22684971-22685206)
chr8 (575-655)||(3275955-3276035)
chr8 (572-655)||(23180008-23180091)
chr8 (761-837)||(3276184-3276260)
[»] chr3 (65 HSPs)
chr3 (572-838)||(10208263-10208530)
chr3 (572-838)||(10201217-10201484)
chr3 (213-571)||(2820514-2820872)
chr3 (572-838)||(10100354-10100621)
chr3 (572-838)||(10094337-10094598)
chr3 (572-837)||(16461853-16462119)
chr3 (572-837)||(29914219-29914484)
chr3 (9-208)||(2820903-2821102)
chr3 (572-837)||(10896655-10896921)
chr3 (573-837)||(54188160-54188424)
chr3 (572-837)||(5858197-5858462)
chr3 (624-838)||(6303015-6303229)
chr3 (262-571)||(2761168-2761477)
chr3 (572-837)||(47878437-47878681)
chr3 (627-838)||(27543980-27544192)
chr3 (572-778)||(22627489-22627695)
chr3 (249-571)||(2809221-2809543)
chr3 (572-753)||(29963456-29963637)
chr3 (572-837)||(54192897-54193141)
chr3 (588-837)||(10613044-10613293)
chr3 (572-837)||(10595300-10595541)
chr3 (9-198)||(2809624-2809822)
chr3 (572-805)||(51727309-51727543)
chr3 (572-805)||(4308584-4308818)
chr3 (572-637)||(10901398-10901463)
chr3 (572-805)||(27101563-27101797)
chr3 (572-805)||(25690659-25690893)
chr3 (278-566)||(2771019-2771307)
chr3 (572-790)||(9604931-9605150)
chr3 (572-687)||(10949694-10949810)
chr3 (572-803)||(35918254-35918486)
chr3 (570-688)||(43225825-43225943)
chr3 (572-688)||(20031764-20031882)
chr3 (572-825)||(47883159-47883412)
chr3 (572-688)||(11079169-11079286)
chr3 (573-655)||(29956218-29956300)
chr3 (573-655)||(30005373-30005455)
chr3 (572-653)||(27762476-27762557)
chr3 (278-566)||(2792273-2792561)
chr3 (774-837)||(22626250-22626312)
chr3 (440-566)||(2750954-2751080)
chr3 (721-837)||(4535411-4535530)
chr3 (572-620)||(27543946-27543994)
chr3 (572-655)||(4535262-4535345)
chr3 (717-790)||(29956529-29956602)
chr3 (717-790)||(30005684-30005757)
chr3 (717-790)||(43228156-43228229)
chr3 (149-190)||(2799725-2799766)
chr3 (448-569)||(2853874-2853995)
chr3 (596-837)||(48390486-48390727)
chr3 (278-566)||(2799320-2799608)
chr3 (572-620)||(6302984-6303032)
chr3 (717-790)||(43225951-43226024)
chr3 (26-79)||(2793422-2793475)
chr3 (572-617)||(43228032-43228077)
chr3 (154-203)||(2761565-2761614)
chr3 (762-825)||(10949536-10949598)
chr3 (572-647)||(45882659-45882734)
chr3 (149-208)||(2836337-2836396)
chr3 (731-824)||(27762263-27762355)
chr3 (9-59)||(2761632-2761682)
chr3 (795-837)||(20031580-20031621)
chr3 (30-100)||(2771531-2771605)
chr3 (9-78)||(2773460-2773529)
chr3 (753-805)||(27101488-27101540)
[»] chr2 (25 HSPs)
chr2 (572-838)||(2735858-2736124)
chr2 (572-838)||(2740594-2740860)
chr2 (572-838)||(39686636-39686902)
chr2 (572-838)||(45567062-45567328)
chr2 (572-838)||(17462088-17462355)
chr2 (572-835)||(39679698-39679961)
chr2 (572-837)||(22717491-22717756)
chr2 (572-837)||(33674671-33674936)
chr2 (572-837)||(22712782-22713026)
chr2 (572-825)||(12781498-12781751)
chr2 (572-837)||(20050288-20050554)
chr2 (571-837)||(20055031-20055301)
chr2 (701-835)||(17932414-17932548)
chr2 (572-837)||(30478666-30478910)
chr2 (572-837)||(35894527-35894771)
chr2 (572-837)||(27517905-27518151)
chr2 (701-825)||(17943318-17943442)
chr2 (572-653)||(17943210-17943291)
chr2 (572-837)||(37171018-37171283)
chr2 (572-688)||(38190649-38190766)
chr2 (717-790)||(45280306-45280379)
chr2 (717-790)||(5377754-5377827)
chr2 (574-624)||(5377898-5377948)
chr2 (572-618)||(45280457-45280503)
chr2 (573-618)||(17932328-17932373)
[»] chr1 (12 HSPs)
chr1 (572-837)||(9526117-9526382)
chr1 (572-837)||(9521367-9521631)
chr1 (572-838)||(2232262-2232516)
chr1 (571-837)||(21353612-21353858)
chr1 (572-655)||(2393729-2393812)
chr1 (572-655)||(2401643-2401726)
chr1 (572-655)||(2617280-2617363)
chr1 (572-653)||(25133681-25133762)
chr1 (572-639)||(23689317-23689384)
chr1 (720-804)||(13449856-13449941)
chr1 (717-805)||(2617403-2617490)
chr1 (30-81)||(11115041-11115092)
[»] chr5 (16 HSPs)
chr5 (578-838)||(1170470-1170730)
chr5 (572-837)||(25452146-25452411)
chr5 (572-837)||(2298267-2298528)
chr5 (572-837)||(35385718-35385962)
chr5 (572-837)||(22672504-22672750)
chr5 (572-837)||(40222414-40222679)
chr5 (572-837)||(42237954-42238219)
chr5 (572-837)||(1240078-1240344)
chr5 (734-837)||(25445305-25445408)
chr5 (572-805)||(6747044-6747278)
chr5 (571-805)||(10529404-10529639)
chr5 (571-805)||(6744800-6745035)
chr5 (572-657)||(25445219-25445304)
chr5 (572-805)||(4409797-4410031)
chr5 (574-805)||(39854226-39854458)
chr5 (577-627)||(17841766-17841816)
[»] scaffold0256 (1 HSPs)
scaffold0256 (572-837)||(15976-16241)
[»] scaffold0131 (1 HSPs)
scaffold0131 (574-838)||(30795-31060)
[»] scaffold0006 (1 HSPs)
scaffold0006 (589-838)||(224510-224738)
[»] scaffold1764 (1 HSPs)
scaffold1764 (572-837)||(1108-1352)
[»] scaffold0209 (1 HSPs)
scaffold0209 (572-837)||(17252-17496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (571-837)||(188508-188754)
[»] scaffold0038 (1 HSPs)
scaffold0038 (572-805)||(41788-42022)
[»] scaffold0552 (2 HSPs)
scaffold0552 (572-655)||(1266-1349)
scaffold0552 (717-805)||(1136-1225)
[»] scaffold0016 (1 HSPs)
scaffold0016 (572-612)||(120569-120609)
[»] scaffold0691 (1 HSPs)
scaffold0691 (487-571)||(4252-4336)


Alignment Details
Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 31249243 - 31248977
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249243 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 31249144  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249143 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 31249044  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249043 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 31248977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 35201855 - 35201589
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201855 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 35201756  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201755 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 35201656  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201655 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 35201589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 13883128 - 13883394
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883128 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 13883227  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883228 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 13883327  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883328 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 13883394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 30975228 - 30974962
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  30975228 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30975129  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30975128 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 30975029  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30975028 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 30974962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 30981667 - 30981401
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  30981667 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30981568  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30981567 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 30981468  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30981467 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 30981401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 30987831 - 30987565
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  30987831 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30987732  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30987731 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 30987632  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30987631 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 30987565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 35209090 - 35208824
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35209090 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacaatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 35208991  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35208990 tttttcgtgccacgatgaagcctcaacgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 35208891  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35208890 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 35208824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 571 - 838
Target Start/End: Complemental strand, 26887755 - 26887487
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26887755 gtgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgg 26887656  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaagg 769  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  26887655 aaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttataagg 26887556  T
Q  770 gtttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26887555 gtttactttccactataaatacagccttgtatcagatgataaaagcgtgtagaaaaacaaggtttagac 26887487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 13878380 - 13878646
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  13878380 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccatgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 13878479  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  ||||||||||||||||     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13878480 aaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 13878579  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13878580 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 13878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 16785572 - 16785838
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16785572 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatcgaaaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 16785671  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  | ||||||||||||||     ||| |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16785672 aaaattgtgccacgatgaagcagggtcgtgccacgatggtcgcactgaagataaaaataaaatgtattttcatttagatttgtttcagttttttaagggt 16785771  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16785772 ttactttccactataaatacagccttgtagcagatgataaaagtgtgtagaaaaacaaggtttagac 16785838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 17695382 - 17695117
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  17695382 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 17695283  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    | ||| |||||||||||||| | ||||| |||||||||| |||||||||||||    ||||||||||||||| |||||||||||||||||||||||||||    
T  17695282 atttttgtgccacgatgaagccgcatcgtgccacgatggccgcgctgaagatatttttaaaacgtattttcaattagatttgtttcagttttttaagggt 17695183  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  17695182 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 17695117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 25466431 - 25466165
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||| || |||||||||||||||   |||||  ||||||    
T  25466431 tgtgagagttaacttaaaatcagaaatctagagaatcatgccacgatggagaagcatcgtgccacaattgttgaagcaagattctaaggaagctactgga 25466332  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||| | ||||  |||||||||||  |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  25466331 aatttcgtgccacgatgaagccgcatcatgccacgatggtatcgctgaagataaaaataaaacgtactttcagcatagatttgtttcagttttttaaggg 25466232  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  25466231 tttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 25466165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 585 - 837
Target Start/End: Original strand, 25941330 - 25941561
Alignment:
Q  585 ttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccac 684  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||      
T  25941330 ttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcgtgcc-- 25941427  T
Q  685 gatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcacta 784  Q
                       |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25941428 -------------------acgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccacta 25941508  T
Q  785 taaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  25941509 taaatataagccttgtatcagatgat-aaagtgtgtagaaaaacatggtttaga 25941561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 572 - 803
Target Start/End: Original strand, 26084725 - 26084957
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  26084725 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 26084824  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  ||||||||||||  |  | ||||| | ||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  26084825 aaaatcgtgccacgattgaatcgcatcgtggcacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 26084923  T
Q  770 gtttacttttcactataaatacag-ccttgtatca 803  Q
    | |||| |||||||||||||| || ||||||||||    
T  26084924 gattac-tttcactataaatatagaccttgtatca 26084957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 572 - 803
Target Start/End: Original strand, 26064756 - 26064988
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  ||||  |    
T  26064756 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcacttta 26064855  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    || |||||| ||||||     |  |||| |  |||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  26064856 aaattcgtgtcacgattgtatcgtatcgtgttacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 26064954  T
Q  770 gtttacttttcactataaatacag-ccttgtatca 803  Q
    | |||| |||||||||||||| || ||||||||||    
T  26064955 gattac-tttcactataaatatagaccttgtatca 26064988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 572 - 805
Target Start/End: Complemental strand, 28241860 - 28241626
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| |||||||| |||| ||||| | | ||||| | ||||||||    
T  28241860 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaa-agttctgggcaaacactgga 28241762  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcag-ttttttaag 768  Q
    ||  ||||||||||||     |  |||| |||||||| || |||  ||||||||||||||||||||||||| | |  | ||||||||||| |||||||||    
T  28241761 aaaatcgtgccacgattgtatcgaatcgtgccacgatagt-gcgattgaagataaaaataaaacgtatttttattgaaaatttgtttcagtttttttaag 28241663  T
Q  769 ggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    || |||| |||||||||||||| || ||||||||||||    
T  28241662 ggattac-tttcactataaatatagaccttgtatcaga 28241626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 576 - 837
Target Start/End: Complemental strand, 22343331 - 22343067
Alignment:
Q  576 agagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatt 675  Q
    ||||||||||||||||||||| ||||||| |||  |||||||||||||||| ||| |||||||| |||||||||| | ||  | | |  || ||||||      
T  22343331 agagttaacttaaaatcagaattctggagaatcaagccacgatggagaagcttcgtgccacgattgttgaagcaaaactctggagcattcattggaaaaa 22343232  T
Q  676 tcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagtttttt--aagggt 771  Q
    ||||||||||||     |  ||||  |||||||||| ||| | ||||||||||| |||||||||||| | | | ||||||||||||||||||  |||||     
T  22343231 tcgtgccacgattggatcaaatcgtaccacgatggt-gcgattgaagataaaaacaaaacgtatttttattgaagatttgtttcagttttttttaagggg 22343133  T
Q  772 ttacttttcactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| | ||||||||| | ||||||||||| |||||||| ||||||||||||||| ||||||||    
T  22343132 ttactttcccctataaatataagccttgtatcatatgataaa-gtgtgtagaaaaacagggtttaga 22343067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 22352386 - 22352118
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||  || ||| ||| ||||||| || |||||||||| ||| |||||||| |||||| ||| ||||  | | |  |||||||    
T  22352386 tgtgagagttaacttaaaatctaaattctagagaatcgtgctacaatggagaagcttcgtgccacgattgttgaatcaaaattctggagcattcactgga 22352287  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagtttttt--aa 767  Q
    ||  | ||||||||||     |  |||| ||||||||||| ||| | ||||||||||| |||||||||||| | | | ||||||||||||||||||  ||    
T  22352286 aaaattgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaacaaaacgtatttttattgaagatttgtttcagttttttttaa 22352188  T
Q  768 gggtttacttttcactataaatacag-ccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||| ||||||| ||||||||||| |  ||||||||||||||||||| ||||||||||||||| ||||||||    
T  22352187 ggggttactttccactataaatataaaccttgtatcagatgataaa-gtgtgtagaaaaacagggtttaga 22352118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 572 - 655
Target Start/End: Complemental strand, 1230767 - 1230684
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  1230767 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 1230684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 688
Target Start/End: Original strand, 26642828 - 26642945
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||| | || || ||||| |||||| ||||||||    | || ||||||    
T  26642828 gtgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactgg 26642927  T
Q  671 aaatttcgtgccacgatg 688  Q
    ||| ||||||| ||||||    
T  26642928 aaacttcgtgcaacgatg 26642945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 688
Target Start/End: Original strand, 26748794 - 26748911
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||| | || || ||||| |||||| ||||||||    | || ||||||    
T  26748794 gtgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactgg 26748893  T
Q  671 aaatttcgtgccacgatg 688  Q
    ||| ||||||| ||||||    
T  26748894 aaacttcgtgcaacgatg 26748911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 653
Target Start/End: Complemental strand, 13468036 - 13467955
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 653  Q
    ||||||||||||||||||||||| ||| ||||| | | | |||||||||||||||| || |||||||| |||||||||||||    
T  13468036 tgtgagagttaacttaaaatcaggaatttggagaaacataccacgatggagaagcaacgtgccacgattgttgaagcaagat 13467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 717 - 803
Target Start/End: Complemental strand, 1230643 - 1230556
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaatacag-ccttgtatca 803  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| |||| |||||||||||||| || ||||||||||    
T  1230643 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaatatagaccttgtatca 1230556  T

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Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 837
Target Start/End: Original strand, 33215533 - 33215743
Alignment:
Q  627 atcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaa 726  Q
    |||| |||||||| ||||||| |||||||    | || |||||||||  |||||||||||||||  | || || | |||||||||  |  ||| ||||||    
T  33215533 atcgtgccacgattgttgaagaaagattctgaagcagtcactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtaccattgaggataaa 33215632  T
Q  727 aataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaataca-gccttgtatcagatgataaaagtgtgtagaaa 824  Q
    |   ||||||||||||||| | |||||||| || ||||| ||||| ||||||| ||||||||||| | ||||||| |||||||||||| |||||||||||    
T  33215633 acagaaacgtattttcagtgaagatttgttccaatttttaaaggggttacttt-cactataaatataagccttgtgtcagatgataaa-gtgtgtagaaa 33215730  T
Q  825 aacaaggtttaga 837  Q
    ||||  |||||||    
T  33215731 aacagagtttaga 33215743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 572 - 618
Target Start/End: Original strand, 33215499 - 33215545
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 618  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33215499 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgat 33215545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 837
Target Start/End: Complemental strand, 13467803 - 13467729
Alignment:
Q  762 ttttaagggtttacttttcactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||||||| ||||| ||||||||||| | ||||||||||| |||||||| ||||||||||||||| ||||||||    
T  13467803 ttttaagggtt-actttccactataaatataagccttgtatcaaatgataaa-gtgtgtagaaaaacagggtttaga 13467729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 647
Target Start/End: Complemental strand, 15533220 - 15533145
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 647  Q
    ||||||||||||||||||||||| | |||  || | ||||||||||||||||||||| || ||||||||||||||||    
T  15533220 tgtgagagttaacttaaaatcagga-tctacagaaatcgtgccacgatggagaagcaacgtgccacgatggttgaag 15533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 255; Significance: 1e-141; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 7069433 - 7069699
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7069433 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 7069532  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7069533 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 7069632  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7069633 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 7069699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 7074440 - 7074706
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7074440 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgtgccacgatggttgaagcaagattcctgggaagacactgga 7074539  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7074540 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 7074639  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7074640 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 7074706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 25405046 - 25405312
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405046 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 25405145  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405146 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 25405245  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405246 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 25405312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 578 - 837
Target Start/End: Complemental strand, 3320573 - 3320314
Alignment:
Q  578 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttc 677  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3320573 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagccactggaaatttc 3320474  T
Q  678 gtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactt 777  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3320473 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactt 3320374  T
Q  778 ttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3320373 tctactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 3320314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 578 - 837
Target Start/End: Complemental strand, 3325321 - 3325062
Alignment:
Q  578 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttc 677  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  3325321 agttaacttaaaatcagaaatctgaagcatcgtgccacgatggagaagcatcgcaccacgatggttgaagcaagattcctgggaagccactggaaatttc 3325222  T
Q  678 gtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactt 777  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3325221 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactt 3325122  T
Q  778 ttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3325121 tctactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 3325062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 571 - 837
Target Start/End: Complemental strand, 44513058 - 44512791
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    ||||||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  44513058 gtgtgagagttaacttaaaatcaaaattctggagaattgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 44512959  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    || |||||||||||||||||| | ||||| |||||||||| |||||||||||||    |||||||||||||||||  |||||||||||||||||||||||    
T  44512958 aattttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagatatttttaaaacgtattttcagtaaagatttgtttcagttttttaagg 44512859  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||||| |||||||||||  |||||||||| ||||||| |||||||||||||||||| ||||||||    
T  44512858 gtttactttccactataaatataagccttgtataagatgat-aaagtgtgtagaaaaacagggtttaga 44512791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 571 - 825
Target Start/End: Original strand, 25351004 - 25351258
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactg 669  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| ||||| |||||  ||||    
T  25351004 gtgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaaga-tcctgaggaagctactg 25351102  T
Q  670 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 769  Q
    ||| |||||||||||||||||| | ||||| ||||||||||   |||||||||||    |||||| ||||||||||||||||||||||||||||||||||    
T  25351103 gaattttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagg 25351202  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||||||||| |||||||||||  |||||| ||||||||||| |||||||||||||||    
T  25351203 gtttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaa 25351258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 571 - 825
Target Start/End: Original strand, 25356698 - 25356952
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactg 669  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| ||||| |||||  ||||    
T  25356698 gtgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaaga-tcctgaggaagctactg 25356796  T
Q  670 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 769  Q
    ||| |||||||||||||||||| | ||||| ||||||||||      ||||||||    |||||| ||||||||||||||||||||||||||||||||||    
T  25356797 gaattttcgtgccacgatgaagccgcatcgtgccacgatggaaaaaatgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagg 25356896  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||||||||| |||||||||||  |||||| ||||||||||| |||||||||||||||    
T  25356897 gtttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaa 25356952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 571 - 837
Target Start/End: Complemental strand, 34547374 - 34547129
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  34547374 gtgtgagagttaacttaaaatcagaaatctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 34547275  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 770  Q
    || |||||||||                     |||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34547274 aattttcgtgcc---------------------acgatggcatcgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 34547196  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| |||||||||||  || ||||||||||||||| |||||||||||||||||| ||||||||    
T  34547195 tttactttccactataaatataagtcttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 34547129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 30246642 - 30246886
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||   |||||  | ||||    
T  30246642 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcattgcgccacgattgttgaagcaagattctgaggaagctattgga 30246741  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||                     ||||||| |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||    
T  30246742 aatttcgtgcc---------------------acgatggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttcagttttttaagggt 30246820  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||| ||||||||| ||||||||    
T  30246821 ttactttccactataaatataagccttgtatcagatgat-aaagtgtggagaaaaacagggtttaga 30246886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 572 - 835
Target Start/End: Complemental strand, 7465029 - 7464786
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  7465029 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 7464930  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 770  Q
    ||||||||||||||                     |||| |||||| |||||||   ||||||||||||||||   | ||||||||||||||||||||||    
T  7464929 aatttcgtgccacg---------------------atggacgcgctcaagataattttaaaacgtattttcagcaaaaatttgtttcagttttttaaggg 7464851  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggttta 835  Q
    |||||||| |||||||||||  || ||||||| ||||||| |||||||||||||||||| ||||||    
T  7464850 tttactttccactataaatataagtcttgtataagatgat-aaagtgtgtagaaaaacagggttta 7464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 578 - 825
Target Start/End: Original strand, 25409809 - 25410035
Alignment:
Q  578 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactggaaattt 676  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| || ||||| |||| |||||  ||||||| |||    
T  25409809 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttggaggaagat-cctgaggaagctactggaatttt 25409907  T
Q  677 cgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttact 776  Q
    ||||||                     |||||||   |||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25409908 cgtgcc---------------------acgatggcatcgctgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagggtttact 25409986  T
Q  777 tttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    || |||||||||||  |||||||||||||||||| |||||||||||||||    
T  25409987 ttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaa 25410035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 572 - 688
Target Start/End: Complemental strand, 8378949 - 8378833
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  8378949 tgtgagagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 8378850  T
Q  672 aatttcgtgccacgatg 688  Q
    ||||||||| |||||||    
T  8378849 aatttcgtggcacgatg 8378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 574 - 790
Target Start/End: Original strand, 40946076 - 40946292
Alignment:
Q  574 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 673  Q
    ||||||||||||||||||||||| |||| || |||||||||||||| |||||| ||| |||||||| |||||||||| ||||  | | |  |||||||||    
T  40946076 tgagagttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 40946175  T
Q  674 tttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggt 771  Q
      ||||| ||||||     |  |||| ||||||||||| |||  |||||||||||||||||| |||||| | |  ||||||||||||||||||||||||     
T  40946176 aatcgtgtcacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacatatttttattgaagatttgtttcagttttttaaggga 40946274  T
Q  772 ttacttttcactataaata 790  Q
    |||| ||||||||||||||    
T  40946275 ttac-tttcactataaata 40946292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 780 - 837
Target Start/End: Complemental strand, 8378827 - 8378770
Alignment:
Q  780 cactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8378827 cactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 8378770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 791 - 838
Target Start/End: Complemental strand, 15541305 - 15541258
Alignment:
Q  791 cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15541305 cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 15541258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 653
Target Start/End: Complemental strand, 44144438 - 44144357
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 653  Q
    ||||||||||||||||||||||| ||||| ||| | ||||||||||||||||| || || |||||||| |||||| ||||||    
T  44144438 tgtgagagttaacttaaaatcaggaatctagagaaacgtgccacgatggagaaacaacgtgccacgattgttgaaacaagat 44144357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 627 - 792
Target Start/End: Original strand, 2120626 - 2120791
Alignment:
Q  627 atcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaa 726  Q
    ||||||||||||| | |||||||| ||||   |||||   ||||||||||||| ||||||||    |  |||| | ||||||||||||||||||||||      
T  2120626 atcgcgccacgattggtgaagcaaaattctgaggaagtttctggaaatttcgtaccacgatggctccgtatcgtggcacgatggtcgcgctgaagatatt 2120725  T
Q  727 aataaaacgtattttc-agttagatttgtttcagttttttaagggtttacttttcactataaataca 792  Q
      |||||||||||||  ||  |||||||||||||||||||||||| ||||| | |||||||||||||    
T  2120726 tttaaaacgtattttttagcaagatttgtttcagttttttaaggg-ttactctccactataaataca 2120791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 804
Target Start/End: Original strand, 48457544 - 48457632
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaatacag-ccttgtatcag 804  Q
    ||||||| ||||||||||||||||| | | | ||||||||||||||||||||||| |||| |||||||||||||| || |||||||||||    
T  48457544 tgaagattaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaatatagaccttgtatcag 48457632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 571 - 618
Target Start/End: Original strand, 2120591 - 2120638
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 618  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  2120591 gtgtgagagttaacttaaaatcagaattctggagtatcgcgccacgat 2120638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 571 - 618
Target Start/End: Original strand, 48457440 - 48457487
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 618  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  48457440 gtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 48457487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 255; Significance: 1e-141; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 11853202 - 11853468
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11853202 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacattgga 11853301  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853302 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 11853401  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853402 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 11853468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 18586616 - 18586882
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||   |||||  ||||||    
T  18586616 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattctgaggaagctactgga 18586715  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    ||  | |||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18586716 aaaattgtgccacgatgaagccgcatcgtgccatgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 18586815  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| |||||||||||  |||||||||||||||||| |||||||||||||||| | ||||||||    
T  18586816 tttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaatagggtttaga 18586882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 570 - 825
Target Start/End: Original strand, 16488999 - 16489254
Alignment:
Q  570 ggtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactg 669  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   || ||  ||||    
T  16488999 ggtgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactg 16489098  T
Q  670 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 769  Q
    ||| |||||||||| ||||||| | ||||| |||||||||| || ||||||||||    ||||||||||||||||||||||||||||||||||||||||     
T  16489099 gaattttcgtgccatgatgaagccgcatcgtgccacgatggacgtgctgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaaga 16489198  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||||||||| |||||| ||||  |||||||||||||||||| |||||||||||||||    
T  16489199 gtttactttccactatgaatataagccttgtatcagatgat-aaagtgtgtagaaaa 16489254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 31300074 - 31300340
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||   |||||  ||||||    
T  31300074 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgaggaagctactgga 31300173  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||  |  | || | ||||||||    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31300174 aatttcgtgccacgatgaatccgtaacgtggcacgatggcattgctgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggg 31300273  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
     ||||||| |||||||||||  ||| |||||||| ||||| |||||||||||||||||| ||||||||    
T  31300274 gttactttccactataaatataagctttgtatcatatgat-aaagtgtgtagaaaaacagggtttaga 31300340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 572 - 805
Target Start/End: Original strand, 40636868 - 40637102
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  40636868 tgtgagagttaacttaaaatcagaattttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 40636967  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||| | ||||| |||||||||| |||||||||||||    ||||||||| |||||||| ||||||||||||||||||||||||    
T  40636968 aatttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagatatttttaaaacgtatttttcagtcagatttgtttcagttttttaaggg 40637067  T
Q  771 tttacttttcactataaatacag-ccttgtatcaga 805  Q
     |||| |||||||||||||| || ||||||||||||    
T  40637068 attac-tttcactataaatatagaccttgtatcaga 40637102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 571 - 837
Target Start/End: Original strand, 8528917 - 8529183
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  8528917 gtgtgagagttaacttaaaatcagatttctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 8529016  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 769  Q
    |||  |||||||||||||||| | ||||| ||||||||||| |||  ||||||||    |||||| ||||||||||||||||||||||||||||||||||    
T  8529017 aaaaatcgtgccacgatgaagccgcatcgtgccacgatggt-gcgattgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagg 8529115  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    || |||||| |||||||||||  ||| ||||||||||| || |||||||||||||||| | ||||||||    
T  8529116 gtatactttccactataaatataagctttgtatcagatcat-aaagtgtgtagaaaaatagggtttaga 8529183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 15316630 - 15316874
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||  ||| ||    
T  15316630 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgaggaagctactaga 15316729  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||                     |||| |||||||||||||    ||||||||||||||||| |||||||||| ||||||||||||||    
T  15316730 aatttcgtgccacg---------------------atggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttaagttttttaagggt 15316808  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||| | |||||||||||||||||| ||||||||    
T  15316809 ttactttccactataaatataagccttgtatcagatggt-aaagtgtgtagaaaaacagggtttaga 15316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 4556585 - 4556325
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |  |||||||| ||||||  ||| |||    ||||   | |||    
T  4556585 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagcaacatgccacgattgttgaaataagtttct---gaag---cagga 4556492  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagg 769  Q
    ||  |||||||||||||||  | || || | ||||||||| ||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4556491 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggt-gcgattgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaagg 4556393  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    | ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  4556392 ggttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 4556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 4884531 - 4884790
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||| |||||||||||||||    | || |||||||    
T  4884531 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgtcacgattgttgaagcaagattctaaagcagtcactgga 4884630  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttc-agttttttaagg 769  Q
    ||  | |||||||||||||    || || | ||||||        ||| |||||||| ||||||||||||||||  ||||||||||| | |||||||| |    
T  4884631 aaaattgtgccacgatgaaattgcaacgtggcacgat--------tgaggataaaaacaaaacgtattttcagtgaagatttgtttcaatttttttaaag 4884722  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    | ||||||| || ||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  4884723 ggttactttccattataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 4884790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 729 - 837
Target Start/End: Original strand, 15830949 - 15831057
Alignment:
Q  729 taaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaac 827  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||    
T  15830949 taaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaac 15831047  T
Q  828 aaggtttaga 837  Q
    | ||||||||    
T  15831048 agggtttaga 15831057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 16689472 - 16689206
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| |||  || |||| ||||||||||| ||     | || |||||||    
T  16689472 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagc-tcgttccgcgattgttgaagcaagtttttgaagcagtcactgga 16689374  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtatttt-cagtta-gatttgtttcagttttttaag 768  Q
    ||  |||||||||||||||  | || || | ||||||||| ||| | || |||||||  |||||||||||| |||| | ||||||||||| |||||||||    
T  16689373 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggt-gcgattgaggataaaataaaaacgtatttttcagtgaagatttgtttcaattttttaag 16689275  T
Q  769 ggtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    || ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  16689274 gggttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 16689206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 572 - 688
Target Start/End: Original strand, 15311994 - 15312110
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||   |||||  |||| |    
T  15311994 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattctaaggaagctactgaa 15312093  T
Q  672 aatttcgtgccacgatg 688  Q
    |||||||||| ||||||    
T  15312094 aatttcgtgcaacgatg 15312110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 576 - 688
Target Start/End: Original strand, 15830817 - 15830929
Alignment:
Q  576 agagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatt 675  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||   || ||  ||||||||||    
T  15830817 agagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgagggagctactggaaatt 15830916  T
Q  676 tcgtgccacgatg 688  Q
    |||||||||||||    
T  15830917 tcgtgccacgatg 15830929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 572 - 805
Target Start/End: Original strand, 47868195 - 47868429
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| | ||| || |||||||||| |||   | | |  |||||||    
T  47868195 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgtcaccattgttgaagcaaaattttggagcaatcactgga 47868294  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  ||||||||||||     || |||| |||||||| || |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  47868295 aaaatcgtgccacgattggatctaatcgtgccacgatagt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 47868393  T
Q  770 gtttacttttcactataaatacag-ccttgtatcaga 805  Q
    | |||| |||||||||||||| || ||||||||||||    
T  47868394 gattac-tttcactataaatatagaccttgtatcaga 47868429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 790
Target Start/End: Complemental strand, 8631963 - 8631744
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctggga-agacactg 669  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||| |||| | |  ||||     
T  8631963 gtgtcagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaatt-ctggaacaatcacta 8631865  T
Q  670 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaa 767  Q
     |||  |||||||| |||     |  |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||    
T  8631864 aaaaaatcgtgccaagattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaa 8631766  T
Q  768 gggtttacttttcactataaata 790  Q
    ||| |||| ||||||||||||||    
T  8631765 gggattac-tttcactataaata 8631744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 572 - 655
Target Start/End: Original strand, 6764654 - 6764737
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||| |||||||||| ||||    
T  6764654 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattc 6764737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 574 - 688
Target Start/End: Complemental strand, 2485390 - 2485277
Alignment:
Q  574 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 673  Q
    ||||||||||||||||||||||  || |||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||||    
T  2485390 tgagagttaacttaaaatcagat-tcaggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 2485292  T
Q  674 tttcgtgccacgatg 688  Q
      |||||||||||||    
T  2485291 aatcgtgccacgatg 2485277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 712 - 790
Target Start/End: Original strand, 15312113 - 15312191
Alignment:
Q  712 cgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    |||||||||||||    || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  15312113 cgcgctgaagatatttttataacgtattttcagtcatatttgtttcagttttttaagggtttactttccactataaata 15312191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 572 - 688
Target Start/End: Original strand, 25699401 - 25699518
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 669  Q
    ||||||||||||||||||||||| |||| | || |  ||||||||||||||||||| || |||||||| |||||| ||||| |||||  | ||| |||||    
T  25699401 tgtgagagttaacttaaaatcaggaatcagaagaaatgtgccacgatggagaagcaacgtgccacgattgttgaaacaaga-tcctgaagcaagtcactg 25699499  T
Q  670 gaaatttcgtgccacgatg 688  Q
    |||| |||||| |||||||    
T  25699500 gaaaattcgtgacacgatg 25699518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 805
Target Start/End: Original strand, 6764778 - 6764867
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    ||||||||||||||||||||||||| | |  |||||||||||| ||||||||||| |||| |||||||||||||| || ||||||||||||    
T  6764778 tgaagataaaaataaaacgtatttttattgaagatttgtttcatttttttaagggattac-tttcactataaatatagaccttgtatcaga 6764867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 652
Target Start/End: Complemental strand, 7050802 - 7050722
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaaga 652  Q
    ||||||||| | ||||||||||| ||||||||| | ||||||||||| |||||||| || |||||||| |||||| |||||    
T  7050802 tgtgagagtcagcttaaaatcaggaatctggagaaacgtgccacgatagagaagcaacgtgccacgattgttgaaacaaga 7050722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 624
Target Start/End: Complemental strand, 26086292 - 26086240
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaa 624  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  26086292 tgtgagagttaacttaaaatcagaattctagagaatcgtgccacgatggagaa 26086240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 717 - 805
Target Start/End: Complemental strand, 2485269 - 2485178
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagt-tagatttgtttcag--ttttttaagggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    ||||||||||||||||||||||||| | |  |||||||||||||  ||||||||||| |||| |||||||||||||| || ||||||||||||    
T  2485269 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttttaagggattac-tttcactataaatatagaccttgtatcaga 2485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 825
Target Start/End: Original strand, 4569907 - 4569999
Alignment:
Q  731 aaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaataca-gccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||||||||||||||| | |||||||| || | ||||||||||| ||||| ||||||||||| | ||||||||||||||||| |||||||||||||||    
T  4569907 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-acttt-cactataaatataagccttgtatcagatgat-aaagtgtgtagaaaa 4569999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 25684296 - 25684562
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684296 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 25684395  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684396 aatttcgtgccacgatgaagacgcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 25684495  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25684496 ttactttccactataaatacaaccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 25684562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 4813018 - 4812750
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4813018 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 4812919  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta--ttttcagttagatttgtttcagttttttaagg 769  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  4812918 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaacaaaacgtattttttcagttagatttgtttcagttttttaagg 4812819  T
Q  770 gtttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812818 gtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 4812750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 28327561 - 28327827
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28327561 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattcctgggaagacactgga 28327660  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28327661 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 28327760  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28327761 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 28327827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 28332284 - 28332550
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28332284 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattcctgggaagacactgga 28332383  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28332384 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 28332483  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28332484 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 28332550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 16753052 - 16752785
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||    
T  16753052 tgtgagacttaacttaaaatcagaaatctggagcatcgtgccacgatagagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 16752953  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  ||||||||||||||||     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16752952 aaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 16752853  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtaga-aaaacaaggtttagac 838  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16752852 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaaacaaggtttagac 16752785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 28895153 - 28895418
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||| |||||||||||| | || | ||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  28895153 tgtgagacttaacttaaaataaaaattttggagaatcgtgccacgatgtagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 28895252  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  ||||||||||||||||      || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28895253 aaaatcgtgccacgatgaagcagtgccgtgccacgatggtcgcggtgaagataaaaataaaacgtattttcagttagatttgtttcagtttttaaagggt 28895352  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28895353 ttactttccactataaatacagccttgtatcagatgataaaagggtgtagaaaaacaaggtttaga 28895418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 29555317 - 29555051
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||   || ||  | ||||    
T  29555317 tgtgagagttaacttaaaatcagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctattgga 29555218  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttt-cagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||      ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29555217 aatttcgtgccacgatggccctgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 29555118  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||| ||||||||    
T  29555117 tttacttttcactataaatataagcgttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 29555051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 16757776 - 16757530
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||    
T  16757776 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 16757677  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  ||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16757676 aaaatcgtgc---------------------cacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 16757598  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtaga-aaaacaaggtttagac 838  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16757597 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaaacaaggtttagac 16757530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 9021638 - 9021373
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||  ||||||    
T  9021638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgaggaagctactgga 9021539  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 770  Q
    | |||||||||||||||||| | ||| | |||||||||||  | ||||||||||   |||||||||||||||| ||||||||||||||||||||||||||    
T  9021538 attttcgtgccacgatgaagccgcattgtgccacgatggtatcactgaagataattttaaaacgtattttcagtttagatttgtttcagttttttaaggg 9021439  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||| ||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  9021438 tttac-tttcactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 9021373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 590466 - 590710
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  590466 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgataaagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 590565  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  590566 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 590644  T
Q  772 ttacttttcactataaat-acagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| ||||||||||   |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  590645 ttactttccactataaatctaagccttgtatcagatgat-aaagagtgtagaaaaacagggtttaga 590710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 21033520 - 21033786
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||  ||| |||||| |||||||||||||||||||||| || |||||||| ||||||||||| ||     | || |||||||    
T  21033520 tgtgagagttaacttaaaatctaaaaactggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagtttgtgaagcagtcactgga 21033619  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagg 769  Q
    ||  ||||||||| ||  |  |  |||| ||||||||||| ||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  21033620 aaaatcgtgccacaattgaatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaagg 21033718  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    | ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  21033719 ggttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 21033786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 571 - 805
Target Start/End: Complemental strand, 22685206 - 22684971
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    ||||| || ||||||||||||||||| |||| || |||||||||||||| |||||| ||| |||||||| |||||| ||| ||||  | | |  ||||||    
T  22685206 gtgtgggacttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaaccaaaattctggagcaatcactgg 22685107  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaag 768  Q
    |||  | ||||||||||  |  |  |||| ||||||||||| ||| | |||||||||||||||||||||||| | | | |||||||||||||||||||||    
T  22685106 aaaaattgtgccacgatcgaatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaag 22685008  T
Q  769 ggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    || |||| |||||||||||||| || ||||||||||||    
T  22685007 ggattac-tttcactataaatatagaccttgtatcaga 22684971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 575 - 655
Target Start/End: Original strand, 3275955 - 3276035
Alignment:
Q  575 gagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||  | |||||||| |||||||||||||||    
T  3275955 gagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaagcaatgtgccacgattgttgaagcaagattc 3276035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 655
Target Start/End: Complemental strand, 23180091 - 23180008
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || | ||| |||||| ||||||||    
T  23180091 tgtgagagttaacttaaaatcaggaatctggagaatcgtgctacgatggagaagcatcgtgctatgattgttgaaacaagattc 23180008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 761 - 837
Target Start/End: Original strand, 3276184 - 3276260
Alignment:
Q  761 tttttaagggtttacttttcactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| | ||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||| ||||||||    
T  3276184 tttttaagaggttacttttcactataaatataagccttgtattagatgataaa-gtgtgtagaaaaacagggtttaga 3276260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 248; Significance: 1e-137; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 10208530 - 10208263
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10208530 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactgga 10208431  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  10208430 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgttttagttttttaaggg 10208331  T
Q  771 tttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10208330 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 10208263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 10201484 - 10201217
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10201484 tgtgagatttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 10201385  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10201384 aatttcgtgccacaatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10201285  T
Q  771 tttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10201284 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 10201217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 213 - 571
Target Start/End: Complemental strand, 2820872 - 2820514
Alignment:
Q  213 atcagatgaggtaacagtgaggacctcatcatcattgaattttggggcactcgtgtgatgaaaggatacaagaggaacatgcttgataatccagtggtct 312  Q
    ||||||||| |||| ||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| | |||     
T  2820872 atcagatgaagtaatagtgcagatctcatcatcattgaattttgggtcactcgtgtgatgaaaggatacaagaggagcatgcttgatactccaatagtca 2820773  T
Q  313 tttcctttgtctgtttcaatactctcaacaagttcatacgacatttcattgaagttaatagctttgagattattcaagaacatggtgccggagggtaccc 412  Q
    ||||| |||| |   |||||||||||||  | |||||  | ||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||||     
T  2820772 tttccattgttttgatcaatactctcaaagaattcatctgccatttcactgaagttaatagctttgagattattcaaggacttgatgccgtagggtacct 2820673  T
Q  413 ccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggtt 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2820672 ccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacagatatactttactctattcaagcgactgaggtt 2820573  T
Q  513 cagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtagg 571  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2820572 cagtctcttcaattttagaaaccctccaattcgaaaatgcaaaatttcaccatcgtagg 2820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 10100621 - 10100354
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10100621 tgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactgga 10100522  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10100521 aatttcgtgccacgatgaagactcatcgcgccacgatgatcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10100422  T
Q  771 tttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10100421 tttactttccacgataaattcagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 10100354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 572 - 838
Target Start/End: Complemental strand, 10094598 - 10094337
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10094598 tgtgagagttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgtcacgatggttgaagcaagattcctgggaagacactgga 10094499  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10094498 aatttcgtgccacgatgaagactcatcgtgccacgatggtcgc------tataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10094405  T
Q  771 tttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10094404 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 10094337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 16461853 - 16462119
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||    
T  16461853 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgga 16461952  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaa-ataaaacgtattttcagttagatttgtttcagttttttaaggg 770  Q
    ||  |||||||||||||||| | ||||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16461953 aaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 16462052  T
Q  771 tttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16462053 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 16462119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 29914484 - 29914219
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  29914484 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 29914385  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||    | ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29914384 aatttcgtgccacgatggctccgcatcgtgccacgatggtcgcattgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 29914285  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29914284 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacagggtttaga 29914219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 2821102 - 2820903
Alignment:
Q  9 caaatttctgtccgcattgacacaagaaacaatcaagtcagttatctcatagaattgtcaacttaattaaacacactaaatctttttcaaaagaaaacga 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2821102 caaattgctgtccgcattgacacaagaaacaatcaagtcagttatctcatagaattgtcaacttaattaaacacactaaatctttttcaaaagaaaatga 2821003  T
Q  109 aacatataaaataaaacgtcgatataaaactgaatgctttataagagaagcattgcatgatcagaggaaaggtaccttcatattttgaagtttgcaagac 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2821002 aacatataaaataaaacgttgatataaaactgaatgctttataagagaagcattgcatgatcagaggaaaggtaccttcatattttgaagcttgcaagac 2820903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 10896655 - 10896921
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||  ||||||    
T  10896655 tgtgagagttaacttaaaatcagaaatatggagtatcgtgccacgatggagaagcatcgcgccacgattgctgaagcatggttcctaggaagctactgga 10896754  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10896755 aatttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10896854  T
Q  771 tttacttttcactataaatac-agccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| ||||||||| || || ||||||||||||||| |||||||||||||||| | ||||||||    
T  10896855 tttactttccactataaagacaagtcttgtatcagatgat-aaagtgtgtagaaaaatagggtttaga 10896921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 573 - 837
Target Start/End: Original strand, 54188160 - 54188424
Alignment:
Q  573 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactgga 671  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||  ||||||    
T  54188160 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagat-cctgaggaagctactgga 54188258  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54188259 tttttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 54188358  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  ||||||||||||| |||| |||||||||||||||||| ||||||||    
T  54188359 ttactttccactataaatataagccttgtatcaggtgat-aaagtgtgtagaaaaacagggtttaga 54188424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 5858197 - 5858462
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   || ||  ||||||    
T  5858197 tgtgagagttaacttaaaatcaggaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgga 5858296  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||    | ||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  5858297 aatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctaaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 5858396  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  5858397 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 5858462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 624 - 838
Target Start/End: Original strand, 6303015 - 6303229
Alignment:
Q  624 agcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagat 723  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||     ||| |||||||||||||||||||||||    
T  6303015 agcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagat 6303114  T
Q  724 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaa 823  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6303115 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaa 6303214  T
Q  824 aaacaaggtttagac 838  Q
    |||||||||||||||    
T  6303215 aaacaaggtttagac 6303229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 262 - 571
Target Start/End: Complemental strand, 2761477 - 2761168
Alignment:
Q  262 ctcgtgtgatgaaaggatacaagaggaacatgcttgataatccagtggtcttttcctttgtctgtttcaatactctcaacaagttcatacgacatttcat 361  Q
    |||| |||||||| |||||||||||| |||||||||||||||  || |||||||||||||||||  |||||||| ||||||| |||| | | |||||||     
T  2761477 ctcgagtgatgaatggatacaagagggacatgcttgataatcatgtagtcttttcctttgtctggatcaatactttcaacaaattcagatggcatttcag 2761378  T
Q  362 tgaagttaatagctttgagattattcaagaacatggtgccggagggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaa 461  Q
    ||||||||||| ||||||| |||| |||| || || |||| ||||| ||| || | || | ||||||||||| |||| | ||||||||||||||||||||    
T  2761377 tgaagttaatatctttgagtttatccaaggacctgatgcctgagggcacctcctttagctgggggattctgtccatgttcagatattcaagagagatcaa 2761278  T
Q  462 agttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttca 561  Q
    |||||||||||||||| ||||| | ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2761277 agttccttcgtctataaggatagaatttaccctattcaagcgcctgaggttcagtctcttcaactttagaaaccctccaatttgaaaatgcaaaatttca 2761178  T
Q  562 ccatcgtagg 571  Q
    ||||| ||||    
T  2761177 ccatcatagg 2761168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 47878681 - 47878437
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  47878681 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 47878582  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878581 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 47878503  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  47878502 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 47878437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 627 - 838
Target Start/End: Original strand, 27543980 - 27544192
Alignment:
Q  627 atcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaa 726  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||     ||| ||||||||||||||||||||||||||    
T  27543980 atcgtgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaa 27544079  T
Q  727 aataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaatacagccttgtatcagatgataaaagtgtgtag-aaaa 825  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  27544080 aataaaacgtattttcagtaagatttgtttcagttttttaagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 27544179  T
Q  826 acaaggtttagac 838  Q
    |||||||||||||    
T  27544180 acaaggtttagac 27544192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 572 - 778
Target Start/End: Complemental strand, 22627695 - 22627489
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||   |||||  ||||||    
T  22627695 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatctcgccacgattgttgaagcaagattctgaggaagctactgga 22627596  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  |||||||||||||||| |   ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22627595 aaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatctgtttcagttttttaagggt 22627496  T
Q  772 ttacttt 778  Q
    |||||||    
T  22627495 ttacttt 22627489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 249 - 571
Target Start/End: Complemental strand, 2809543 - 2809221
Alignment:
Q  249 gaattttggggcactcgtgtgatgaaaggatacaagaggaacatgcttgataatccagtggtcttttcctttgtctgtttcaatactctcaacaagttca 348  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||  ||||  || ||||||| ||||    
T  2809543 gaattttgggccactcgagtgatgaatggatacaagaggaacatgcttgattatccggtagtcttttcctttgtctggatcaacgctttcaacaaattca 2809444  T
Q  349 tacgacatttcattgaagttaatagctttgagattattcaagaacatggtgccggagggtacccccatcagttcggggattctgttcatggtaagatatt 448  Q
       | ||||||| ||||||||||||||||||| |||| |||| |  || |||| ||||||||| || |||| | ||| ||||||| ||||||||||||||    
T  2809443 gctggcatttcagtgaagttaatagctttgagtttatccaaggatctgatgcctgagggtacctccttcagctggggtattctgtccatggtaagatatt 2809344  T
Q  449 caagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaa 548  Q
    ||||||||||||||||||||||||||||| ||| |   | ||||||||||||||||||||| |  ||| || ||||||||| |||||| ||| | |||||    
T  2809343 caagagagatcaaagttccttcgtctataaggacagtatgtactctattcaagcgactgagatctagtttcctcaattttaaaaacccgccattctgaaa 2809244  T
Q  549 atgcaaaatttcaccatcgtagg 571  Q
    ||| |||||||||||||| ||||    
T  2809243 atgtaaaatttcaccatcatagg 2809221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 572 - 753
Target Start/End: Complemental strand, 29963637 - 29963456
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  29963637 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 29963538  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttg 753  Q
    |||||||||||||||||    | ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29963537 aatttcgtgccacgatggctccgcatcgtgccacgatggtcgcattgaagataaaaataaaacgtattttcagttagatttg 29963456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 54192897 - 54193141
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |   |||||  ||||||    
T  54192897 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagatcctaaggaagctactgga 54192996  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||| ||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54192997 tttttcgtgccatga---------------------tggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 54193075  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
     |||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  54193076 gtactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 54193141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 588 - 837
Target Start/End: Complemental strand, 10613293 - 10613044
Alignment:
Q  588 aaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgat 687  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||   |||||  |||||||||||| |||||||||    
T  10613293 aaatcagaaatctggagaatcgtgccacgatggagaaacatcgcaccacgattgttgaagcaagattctgaggaagctactggaaatttcatgccacgat 10613194  T
Q  688 gaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataa 787  Q
    |      ||||| |||||||||| ||| |||||||||    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  10613193 ggcccgacatcgtgccacgatggacgcactgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagtgtttactttccactataa 10613094  T
Q  788 ata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||  |||||||||||| ||||| |||||||||||||||| | ||||||||    
T  10613093 atataagccttgtatcatatgat-aaagtgtgtagaaaaatagggtttaga 10613044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 10595541 - 10595300
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||   |||||  ||||||    
T  10595541 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaaacattgcgccacgattgttgaagcaagattctgaggaagctactgga 10595442  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||||| ||                     ||||||||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  10595441 aatttcgtgccacgatggag---------------------gcgctgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagggt 10595363  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  || |||||||||||||||   |||||||||||||| ||||||||||    
T  10595362 ttactttccactataaatataagtcttgtatcagatgat---agtgtgtagaaaaa-aaggtttaga 10595300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 2809822 - 2809624
Alignment:
Q  9 caaatttctgtccgcattgacacaagaaacaatcaagtcagttatctcatagaattgtcaacttaattaaacacactaaatctttttcaaaagaaaacga 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||      ||| |||||||||||||| |||||||||||||||| |||| ||    
T  2809822 caaatttctgtccgcattgacacaaaaaacaatcaagtcagttatctcatac-----tcagcttaattaaacacattaaatctttttcaaaacaaaatga 2809728  T
Q  109 aacatataaaataaaacgtcgatataaaactgaatgct--------------ttataagagaagcattgcatgatcagaggaaaggtaccttcatatttt 194  Q
    |||| || |||| |||||||| ||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2809727 aacacattaaatgaaacgtcgttataaaactgaatgctagtacaagaatgctttataagagaagcattgcatgatcagaggaaaggtaccttcatatttt 2809628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 572 - 805
Target Start/End: Complemental strand, 51727543 - 51727309
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  51727543 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 51727444  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 770  Q
    ||  ||||||||||||     |  |||| |||||||||||     ||||||||||||||||||||||||| | |  ||||||||||||||||||||||||    
T  51727443 aaaatcgtgccacgatttgatcgaatcgtgccacgatggtgtgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaaggg 51727344  T
Q  771 tttacttttcactataaatacag-ccttgtatcaga 805  Q
     |||| |||||||||||||| || ||||||||||||    
T  51727343 attac-tttcactataaatatagaccttgtatcaga 51727309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 572 - 805
Target Start/End: Complemental strand, 4308818 - 4308584
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  4308818 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgga 4308719  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  ||||||||||||     |  |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  4308718 aaaatcgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 4308620  T
Q  770 gtttacttttcactataaatacag-ccttgtatcaga 805  Q
    | |||| |||||||||||||| || ||||||||||||    
T  4308619 gattac-tttcactataaatatagaccttgtatcaga 4308584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 572 - 637
Target Start/End: Original strand, 10901398 - 10901463
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacg 637  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10901398 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacg 10901463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 572 - 805
Target Start/End: Complemental strand, 27101797 - 27101563
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctggga-agacactgg 670  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  | | |||| ||| |||||||||| ||| |||| | |  ||||||    
T  27101797 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagttttgtgccatgattgttgaagcaaaatt-ctggaacaatcactgg 27101699  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaag 768  Q
    |||  ||||||||||||     |  |||| |||| |||||| |||  ||||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  27101698 aaaaatcgtgccacgattggatcgaatcgtgccaagatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaag 27101600  T
Q  769 ggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    || |||| |||||||||||||| || ||||||||||||    
T  27101599 ggattac-tttcactataaatatagaccttgtatcaga 27101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 572 - 805
Target Start/End: Complemental strand, 25690893 - 25690659
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||  | ||||||||||||||||||||| ||| |||||||| ||||||| || ||||  | | |  |||||||    
T  25690893 tgtgagagttaacttaaaatcagaattctgatgaatcgtgccacgatggagaagcttcgtgccacgattgttgaagaaaaattctggagcaatcactgga 25690794  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  |||||||| |||     |  || | ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  25690793 aaaatcgtgccatgattggatcgaattgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 25690695  T
Q  770 gtttacttttcactataaatacag-ccttgtatcaga 805  Q
    | |||| |||||||||||||| || ||||||||||||    
T  25690694 gattac-tttcactataaatatagaccttgtatcaga 25690659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 278 - 566
Target Start/End: Complemental strand, 2771307 - 2771019
Alignment:
Q  278 atacaagaggaacatgcttgataatccagtggtcttttcctttgtctgtttcaatactctcaacaagttcatacgacatttcattgaagttaatagcttt 377  Q
    |||||||||||||||||||||||||| ||| |||||  ||||| ||||  ||||| || ||||||| ||||   | ||| ||| ||| || |||| ||||    
T  2771307 atacaagaggaacatgcttgataatcgagtagtcttgccctttatctggatcaatgctttcaacaaattcagctggcatatcagtgatgtgaatatcttt 2771208  T
Q  378 gagattattcaagaacatggtgccggagggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctata 477  Q
    ||| |||| || ||   || ||||  |||||||| || |||||| ||||||| | | ||  ||||||| ||||||||||| |||| |||| | ||| |||    
T  2771207 gagtttatgcatgagtttgatgccaaagggtacctccttcagttgggggattttttccagtgtaagatgttcaagagagagcaaatttccatggtcaata 2771108  T
Q  478 cggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatc 566  Q
       ||  | || ||| ||||||||| || ||| |||||| || |||||||||||||||||||| |||||||||| ||||||||||||||    
T  2771107 acaatggagttaactttattcaagcaacggagattcagtgtcatcaattttagaaaccctccattttgaaaatgaaaaatttcaccatc 2771019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 572 - 790
Target Start/End: Complemental strand, 9605150 - 9604931
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg- 670  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||  ||| |||||||| |||||||||| ||||  | | |  ||||||     
T  9605150 tgtgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaagtttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 9605051  T
Q  671 aaatttcgtgccacga-tgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaa 767  Q
    |||  ||||||||||| ||||  | ||||| | ||||||||| |||  |||||||||||||||||| |||||| | |  |||||||||| ||||||||||    
T  9605050 aaaaatcgtgccacgactgaa-tcgcatcgtggcacgatggt-gcgattgaagataaaaataaaacatatttttattgaagatttgttttagttttttaa 9604953  T
Q  768 gggtttacttttcactataaata 790  Q
    ||| |||| ||||||||||||||    
T  9604952 gggattac-tttcactataaata 9604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 572 - 687
Target Start/End: Complemental strand, 10949810 - 10949694
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 669  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| || |||||||| |||||| ||||| |||||  | ||| |||||    
T  10949810 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaaga-tcctgaagcaagtcactg 10949712  T
Q  670 gaaatttcgtgccacgat 687  Q
    |||| |||||||||||||    
T  10949711 gaaaattcgtgccacgat 10949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 572 - 803
Target Start/End: Complemental strand, 35918486 - 35918254
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  35918486 tgtgagagttaacttaaaatcagaattatggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagtaatcactgga 35918387  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  ||||  ||||||     |  || | ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||| ||||||| ||||    
T  35918386 aaaatcgtagcacgattggatcgaatagtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgttttagtttttaaagg 35918288  T
Q  770 gtttacttttcactataaatacag-ccttgtatca 803  Q
    | |||| |||||||||||||| || ||||||||||    
T  35918287 gattac-tttcactataaatatagaccttgtatca 35918254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 570 - 688
Target Start/End: Original strand, 43225825 - 43225943
Alignment:
Q  570 ggtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactg 669  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| || ||||| |||||||||| ||||  | | |  |||||    
T  43225825 ggtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgctacgattgttgaagcaaaattctggagcaatcactg 43225924  T
Q  670 gaaatttcgtgccacgatg 688  Q
    ||||  |||||||||||||    
T  43225925 gaaaaatcgtgccacgatg 43225943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 572 - 688
Target Start/End: Complemental strand, 20031882 - 20031764
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggag-aagcatcgcgccacgatggttgaagcaagattcctg--ggaagacact 668  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||  | |||||||| |||||||||||||| |||  ||||| ||||    
T  20031882 tgtgagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaaagcaatgtgccacgattgttgaagcaagatt-ctgaaggaagtcact 20031784  T
Q  669 ggaaatttcgtgccacgatg 688  Q
    |||||  |||||||||||||    
T  20031783 ggaaaaatcgtgccacgatg 20031764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 572 - 825
Target Start/End: Complemental strand, 47883412 - 47883159
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 669  Q
    ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||| || | |||||| |||||| ||||| |||||  | ||| |||||    
T  47883412 tgtgagagttaacttaaaatcaggaatttggagaaacgtgccacgatggagaagcaacgtgtcacgattgttgaaacaaga-tcctgatgcaagtcactg 47883314  T
Q  670 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaata-aaacgtattttcagt-tagatttgtttcagttttttaa 767  Q
    |||| |||||||||| ||| |     | || | |||||||||  || |||||| || || | |||||||||||||||  ||||||||| || | ||||||    
T  47883313 gaaaattcgtgccacaatggaattgtaacgtggcacgatggt-acgttgaagaaaataacataaacgtattttcagtgaagatttgttcca-tattttaa 47883216  T
Q  768 gggtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||| ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||    
T  47883215 ggg-ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaa 47883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 688
Target Start/End: Original strand, 11079169 - 11079286
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 669  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| || |||||||| ||| ||  |||| |||||  | ||| |||||    
T  11079169 tgtgagagttaacttaaaatcagtaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgtttaaaaaaga-tcctgaagcaagtcactg 11079267  T
Q  670 gaaatttcgtgccacgatg 688  Q
    |||| ||||||||||||||    
T  11079268 gaaaattcgtgccacgatg 11079286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 573 - 655
Target Start/End: Original strand, 29956218 - 29956300
Alignment:
Q  573 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||||||||| ||| |||||||| |||||||||| ||||    
T  29956218 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattc 29956300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 573 - 655
Target Start/End: Original strand, 30005373 - 30005455
Alignment:
Q  573 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||||||||| ||| |||||||| |||||||||| ||||    
T  30005373 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattc 30005455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 572 - 653
Target Start/End: Complemental strand, 27762557 - 27762476
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 653  Q
    ||||||||||||||||||||||| |||||| || | |||||||||||||||||||| || |||||||| |||||| ||||||    
T  27762557 tgtgagagttaacttaaaatcaggaatctgaagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagat 27762476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 278 - 566
Target Start/End: Complemental strand, 2792561 - 2792273
Alignment:
Q  278 atacaagaggaacatgcttgataatccagtggtcttttcctttgtctgtttcaatactctcaacaagttcatacgacatttcattgaagttaatagcttt 377  Q
    |||||||||||||||||||||||||| ||| |||||  ||||| ||||  ||||  || ||||||| ||||   | ||| ||| ||| || |||| ||||    
T  2792561 atacaagaggaacatgcttgataatcgagtagtcttgccctttatctggatcaaagctttcaacaaattcagctggcatatcagtgacgtgaatatcttt 2792462  T
Q  378 gagattattcaagaacatggtgccggagggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctata 477  Q
    ||| |||| || ||   || |||| ||||||||| || |||||| ||||||| | | ||  ||||||| ||| ||||||| ||| ||||| | ||| |||    
T  2792461 gagtttatgcatgagtttgatgccagagggtaccgccttcagttgggggattttttccagagtaagatgttcgagagagagcaaggttccattgtcaata 2792362  T
Q  478 cggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatc 566  Q
       |   | |||||| ||| ||||| || |||||||||| || ||| ||| |||||||||||| |||||||||| ||||||||||||||    
T  2792361 acaaccgagtttactttatacaagcaacggaggttcagtgtcatcagtttaagaaaccctccattttgaaaatgaaaaatttcaccatc 2792273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 774 - 837
Target Start/End: Complemental strand, 22626312 - 22626250
Alignment:
Q  774 acttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  22626312 actttccactataaatacagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 22626250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 440 - 566
Target Start/End: Complemental strand, 2751080 - 2750954
Alignment:
Q  440 taagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctcc 539  Q
    |||||| ||||||||||| ||||| |||||  |||||| ||||| | |||  |||||||||| |||||||  |||||   |||||| || |||| |||||    
T  2751080 taagattttcaagagagagcaaagctcctttctctataaggatagaatttggtctattcaagtgactgagaatcagttctttcaatatttgaaatcctcc 2750981  T
Q  540 aatttgaaaatgcaaaatttcaccatc 566  Q
    | |||||||||||||||||||||||||    
T  2750980 attttgaaaatgcaaaatttcaccatc 2750954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 721 - 837
Target Start/End: Original strand, 4535411 - 4535530
Alignment:
Q  721 gataaaaataaaacgtattttcagtta-gatttgtttcagtttt--ttaagggtttacttttcactataaataca-gccttgtatcagatgataaaagtg 816  Q
    |||||||| |||||||||||||||| | ||||||||||| ||||  |||| || ||||||| |||||||| || | | |||||||||||||||||| |||    
T  4535411 gataaaaacaaaacgtattttcagtgaagatttgtttcaattttgtttaaagggttactttccactataattataagtcttgtatcagatgataaa-gtg 4535509  T
Q  817 tgtagaaaaacaaggtttaga 837  Q
    |||||||||||| ||||||||    
T  4535510 tgtagaaaaacagggtttaga 4535530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 620
Target Start/End: Original strand, 27543946 - 27543994
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 620  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27543946 tgtgagagttaacttaaaatcagaaatttggagtatcgtgccacgatgg 27543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 572 - 655
Target Start/End: Original strand, 4535262 - 4535345
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||  ||||||||| ||| |  ||||||||||||||| || |||||||| |||||| ||||||||    
T  4535262 tgtgagagttaacttaaaatcatgaatctggagaatcatatcacgatggagaagcaacgtgccacgattgttgaaacaagattc 4535345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 790
Target Start/End: Original strand, 29956529 - 29956602
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| |||| ||||||||||||||    
T  29956529 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaata 29956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 790
Target Start/End: Original strand, 30005684 - 30005757
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| |||| ||||||||||||||    
T  30005684 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaata 30005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 790
Target Start/End: Original strand, 43228156 - 43228229
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| |||| ||||||||||||||    
T  43228156 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaata 43228229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 2799766 - 2799725
Alignment:
Q  149 ataagagaagcattgcatgatcagaggaaaggtaccttcata 190  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2799766 ataagagaagcattgcatgatcagaggaaaggtaccttcata 2799725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 448 - 569
Target Start/End: Original strand, 2853874 - 2853995
Alignment:
Q  448 tcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaa 547  Q
    |||||||| ||||||| |||||  |||||| | ||| | |||  ||||||||||  ||||||  |||||   ||||||||| |||| |||||| ||||||    
T  2853874 tcaagagaaatcaaagctcctttctctataagaatagaatttggtctattcaagtaactgagaatcagttctttcaatttttgaaatcctccattttgaa 2853973  T
Q  548 aatgcaaaatttcaccatcgta 569  Q
    ||||||||||||||||||||||    
T  2853974 aatgcaaaatttcaccatcgta 2853995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 837
Target Start/End: Complemental strand, 48390727 - 48390486
Alignment:
Q  596 aatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactggaaatttcgtgccacgatgaagact 694  Q
    ||||||||| |  ||| ||||||||||||||| || ||||| || |||||||||||||||  | ||||| |||||||||  |||||| |||||| |  |     
T  48390727 aatctggagaaatgtgtcacgatggagaagcaacgtgccacaattgttgaagcaagattctggaggaagtcactggaaaaatcgtgctacgatggaatcg 48390628  T
Q  695 catcgcgccacgatggtcgcgctgaagataaaaata-aaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaataca 792  Q
     | || | |||||||||  || || ||  || |||| ||||||||||||||| | |||||||||||  |||| ||||||| ||||| ||||||||||| |    
T  48390627 taacgtggcacgatggta-cgatggaggaaataatagaaacgtattttcagtgaagatttgtttcaactttt-aagggtt-actttccactataaatata 48390531  T
Q  793 -gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
     |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  48390530 agcctcgtatcagatgataaa-gtgtgtagaaaaacagggtttaga 48390486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 278 - 566
Target Start/End: Complemental strand, 2799608 - 2799320
Alignment:
Q  278 atacaagaggaacatgcttgataatccagtggtcttttcctttgtctgtttcaatactctcaacaagttcatacgacatttcattgaagttaatagcttt 377  Q
    |||||||||||||||||||||||||  ||| ||  | |||||||||||  ||||| || ||||||| || |   | ||| ||| |||||| |||| ||||    
T  2799608 atacaagaggaacatgcttgataattgagtagttctgtcctttgtctggatcaatgctttcaacaaattgagctggcatatcagtgaagtaaatatcttt 2799509  T
Q  378 gagattattcaagaacatggtgccggagggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctata 477  Q
    ||| |||| || |  | |  ||||   ||||||| || |||| | ||||||| | | ||  ||||||| ||||||||| | ||||||||| |  || |||    
T  2799508 gagtttatgcatgtgctttatgccaatgggtacctccttcagctgggggattttttccagtgtaagatgttcaagagatagcaaagttccattctcaata 2799409  T
Q  478 cggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatc 566  Q
      |||  | |||| |||||||||| | |  ||||||||| | ||||||||||||||||||||| || ||||||| ||||||||||||||    
T  2799408 atgatggaatttattctattcaagtgtcgaaggttcagtgtgttcaattttagaaaccctccatttcgaaaatgaaaaatttcaccatc 2799320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 620
Target Start/End: Original strand, 6302984 - 6303032
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 620  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  6302984 tgtgagagttaacttaaaatcagaaatctggagcatcgcgccacgatgg 6303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 790
Target Start/End: Original strand, 43225951 - 43226024
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    ||||||||||||||||| ||||||| | | | ||||||||||||||||||||||| |||| ||||||||||||||    
T  43225951 tgaagataaaaataaaatgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaata 43226024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 2793475 - 2793422
Alignment:
Q  26 tgacacaagaaacaatcaagtcagttatctcatagaattgtcaacttaattaaa 79  Q
    |||||| |||||||||  |||||||||||||||| |||||||||||||||||||    
T  2793475 tgacacgagaaacaatttagtcagttatctcatacaattgtcaacttaattaaa 2793422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 572 - 617
Target Start/End: Original strand, 43228032 - 43228077
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacga 617  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  43228032 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 43228077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 2761614 - 2761565
Alignment:
Q  154 agaagcattgcatgatcagaggaaaggtaccttcatattttgaagtttgc 203  Q
    ||||||||| ||||||| || |||||||||||||||||||||||| ||||    
T  2761614 agaagcattacatgatcggatgaaaggtaccttcatattttgaagcttgc 2761565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 825
Target Start/End: Complemental strand, 10949598 - 10949536
Alignment:
Q  762 ttttaagggtttacttttcactataaataca-gccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||||||||||| ||||| ||||||||||| | ||||||||||||||||| |||||||||||||||    
T  10949598 ttttaagggtt-actttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaa 10949536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 647
Target Start/End: Original strand, 45882659 - 45882734
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 647  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  45882659 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 45882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 2836337 - 2836396
Alignment:
Q  149 ataagagaagcattgcatgatcagaggaaaggtaccttcatattttgaagtttgcaagac 208  Q
    ||||||||||||||||  |||||||||| |||||||||| | |||||||| |||| ||||    
T  2836337 ataagagaagcattgcgcgatcagaggagaggtaccttcttgttttgaagcttgctagac 2836396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 731 - 824
Target Start/End: Complemental strand, 27762355 - 27762263
Alignment:
Q  731 aaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaatac-agccttgtatcagatgataaaagtgtgtagaaa 824  Q
    ||||||||||||||| | |||||||| || | ||||||||||| ||||| |||||||||||  || ||||||||||||||| ||||||||||||||    
T  27762355 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttccactataaatattagtcttgtatcagatgat-aaagtgtgtagaaa 27762263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 2761682 - 2761632
Alignment:
Q  9 caaatttctgtccgcattgacacaagaaacaatcaagtcagttatctcata 59  Q
    |||||||||| || ||  ||||||||||| |||||||||||||||||||||    
T  2761682 caaatttctggccacaccgacacaagaaaaaatcaagtcagttatctcata 2761632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 795 - 837
Target Start/End: Complemental strand, 20031621 - 20031580
Alignment:
Q  795 cttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  20031621 cttgtatcagatgataaa-gtgtgtagaaaaacagggtttaga 20031580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 2771605 - 2771531
Alignment:
Q  30 acaagaaacaatcaagtcagttatctcatagaattgtc----aacttaattaaacacactaaatctttttcaaaa 100  Q
    ||||||||||||  | |||||||||||||| |||||||    |||||||||||||||   |||||||||||||||    
T  2771605 acaagaaacaatttactcagttatctcatacaattgtcggtcaacttaattaaacacgtcaaatctttttcaaaa 2771531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 2773529 - 2773460
Alignment:
Q  9 caaatttctgtccgcattgacacaagaaacaatcaagtcagttatctcatagaattgtcaacttaattaa 78  Q
    |||||| |||||| ||||| |||||||||||||| | |||| ||||||||| | ||| ||| ||||||||    
T  2773529 caaattgctgtccacattggcacaagaaacaatcgactcaggtatctcatacatttgccaatttaattaa 2773460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 805
Target Start/End: Complemental strand, 27101540 - 27101488
Alignment:
Q  753 gtttcagttttttaagggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    |||||||||||||||||| |||| |||||||||||||| || ||||||||||||    
T  27101540 gtttcagttttttaagggattac-tttcactataaatatagaccttgtatcaga 27101488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 243; Significance: 1e-134; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 2735858 - 2736124
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2735858 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 2735957  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  2735958 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttttgggt 2736057  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2736058 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 2736124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 2740594 - 2740860
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2740594 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcttgggaagacactgga 2740693  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740694 ttttttgtgccacgatgaagcctcatcgcgtcacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 2740793  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740794 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 2740860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 39686636 - 39686902
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39686636 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 39686735  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39686736 tttttcgtgccacgatgaagcctcaccgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 39686835  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39686836 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 39686902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 45567062 - 45567328
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45567062 tgtgagcgttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgga 45567161  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  45567162 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttagttagatttgtttcagttttataagggt 45567261  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45567262 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 45567328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 17462088 - 17462355
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  17462088 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggatgaagcaagattcctggtcagacactgga 17462187  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 770  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  17462188 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttataaggg 17462287  T
Q  771 tttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17462288 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 17462355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 572 - 835
Target Start/End: Original strand, 39679698 - 39679961
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39679698 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagatactgga 39679797  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
      |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39679798 tttttcgtgccacgatgaagcctcattgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 39679897  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggttta 835  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39679898 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggttta 39679961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 22717756 - 22717491
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||    
T  22717756 tgtgagagttaacttaaaatcagaaatctgaagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgga 22717657  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  |||||||||||||||| | ||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22717656 aaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 22717557  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22717556 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 22717491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 33674936 - 33674671
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||  ||||||    
T  33674936 tgtgagagttaacttaaaatcagaaatctagagaatcgtgccacgatggagaagtatcgcgccacgattgttgaagtaagattcctgggaagctactgga 33674837  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  |||||||||||||||| |   ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33674836 aaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgtagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 33674737  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33674736 ttactttccactataaatacagtcttgtatcagatgataaaagtgtgtagaaaaacagggtttaga 33674671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 22713026 - 22712782
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  22713026 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 22712927  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22712926 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 22712848  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  22712847 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 22712782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 572 - 825
Target Start/End: Complemental strand, 12781751 - 12781498
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  12781751 tgtgagagttaacttaaaatcagaaatctggataatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 12781652  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||| ||||||||      |||| | ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781651 aatttcgtggcacgatgaccctgtatcgtggcacgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 12781552  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaa 825  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||    
T  12781551 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaa 12781498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 20050554 - 20050288
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||   |||||  ||||||    
T  20050554 tgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgtgccacgattgttgcagcaagattctgaggaagctactgga 20050455  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 770  Q
    | |||||||||||||||||| | || || |||||||||| |||||||||||||    |||||||||||||||||  ||||||||||||||||||||||||    
T  20050454 attttcgtgccacgatgaagccgcaacgtgccacgatggacgcgctgaagatacttttaaaacgtattttcagtaaagatttgtttcagttttttaaggg 20050355  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||| ||||    
T  20050354 tttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtataga 20050288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 571 - 837
Target Start/End: Complemental strand, 20055301 - 20055031
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||   |||||  |||||    
T  20055301 gtgtgagagttaacttaaaatcagaattctggagaatcatgccacgatggagaagcatcgcaccacgattgttgaagcaagattctgaggaagctactgg 20055202  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagat---ttgtttcagtttttta 766  Q
    || |||| ||||||||||||| | ||||| ||||||||||  ||| ||||||||    |||||||||||||||||  ||||   ||||||||||||||||    
T  20055201 aattttcatgccacgatgaagccgcatcgtgccacgatggatgcgttgaagatacttttaaaacgtattttcagtaaagattaattgtttcagtttttta 20055102  T
Q  767 agggtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||| ||||    
T  20055101 agggtttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtataga 20055031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 701 - 835
Target Start/End: Original strand, 17932414 - 17932548
Alignment:
Q  701 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaatacagccttgta 800  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17932414 gccacgatggtcgcgttgaagataaaaataaaacgtatattcagttagatttgtttcagttttttaagggtttactttccactataaatacagccttgta 17932513  T
Q  801 tcagatgataaaagtgtgtagaaaaacaaggttta 835  Q
    |||||||||||||||||||||||||||| ||||||    
T  17932514 tcagatgataaaagtgtgtagaaaaacagggttta 17932548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 30478666 - 30478910
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  30478666 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 30478765  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||| |||||||      |||||                ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  30478766 aatttcgtggcacgatg-----gcatcg----------------ctgaagataaaaataaaacgtgttttcagttagatttgttttagttttttaagggt 30478844  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||  |||||||    
T  30478845 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagagtttaga 30478910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 35894771 - 35894527
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| || || | |||||||||||||||||||||||||| |||||||||||||||   || ||  ||||||    
T  35894771 tgtgagagttaacttaaaatcagaattctggagaattgtactacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgga 35894672  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    | |||||||||||||||      |||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35894671 attttcgtgccacgatg-----gcatcg----------------ctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 35894593  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  35894592 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 35894527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 27518151 - 27517905
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||   |||||  ||||||    
T  27518151 tgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgcgccacgatttttgaagcaagattctgaggaagctactgga 27518052  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||                     ||||||| |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||    
T  27518051 aatttcgtgcc---------------------acgatggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttcagttttttaagggt 27517973  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaa-agtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||| ||||||||  ||||||||||||||| ||||||||    
T  27517972 ttactttccactataaatataagccttgtatcaaatgataaagtgtgtgtagaaaaacagggtttaga 27517905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 701 - 825
Target Start/End: Original strand, 17943318 - 17943442
Alignment:
Q  701 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaata-cagccttgt 799  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  17943318 gccatgatggtcgtgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatataagccttgt 17943417  T
Q  800 atcagatgataaaagtgtgtagaaaa 825  Q
    |||||||||| || ||||||||||||    
T  17943418 atcagatgat-aaggtgtgtagaaaa 17943442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 572 - 653
Target Start/End: Original strand, 17943210 - 17943291
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 653  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  17943210 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagtaagat 17943291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 37171283 - 37171018
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 669  Q
    |||||||||||||||||||| || ||||||||| | |||||||||||||||||||| || |||| ||| |||||| ||||| |||||  | ||| || ||    
T  37171283 tgtgagagttaacttaaaataaggaatctggagaaacgtgccacgatggagaagcaacgtgccatgattgttgaaacaaga-tcctgaagcaagtcattg 37171185  T
Q  670 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaa-gataaaaataaaacgtattttcagt-tagatttgtttcagttttttaa 767  Q
     ||| |||||||||||||| |  |  | || | ||||||||| |||||||| || | ||  ||||||||||||||||  ||||||||| || | ||||||    
T  37171184 aaaaattcgtgccacgatggaatcgtaacgtggcacgatggt-gcgctgaaggaaataacaaaaacgtattttcagtgaagatttgttcca-tattttaa 37171087  T
Q  768 gggtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||| ||||||| |||||||||||  | |||||||||||||||| |||||||||||||||||| ||||||||    
T  37171086 ggg-ttactttccactataaatataaaccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 37171018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 688
Target Start/End: Original strand, 38190649 - 38190766
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 669  Q
    |||||||||||| |||||||||| ||| ||||| | |||||||||||||||||||| || |||||||| |||||| ||||| |||||  | ||| |||||    
T  38190649 tgtgagagttaatttaaaatcaggaatatggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaaga-tcctgaagcaagtcactg 38190747  T
Q  670 gaaatttcgtgccacgatg 688  Q
    |||| ||||||||||||||    
T  38190748 gaaaattcgtgccacgatg 38190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 790
Target Start/End: Complemental strand, 45280379 - 45280306
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| |||| ||||||||||||||    
T  45280379 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac-tttcactataaata 45280306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 790
Target Start/End: Complemental strand, 5377827 - 5377754
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaata 790  Q
    |||||||||||||||||| |||||| | | | ||||||||||||||||||||||| |||| ||||||||||||||    
T  5377827 tgaagataaaaataaaacttatttttattgaagatttgtttcagttttttaagggattac-tttcactataaata 5377754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 574 - 624
Target Start/End: Complemental strand, 5377948 - 5377898
Alignment:
Q  574 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaa 624  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  5377948 tgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaa 5377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 572 - 618
Target Start/End: Complemental strand, 45280503 - 45280457
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 618  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  45280503 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 45280457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 573 - 618
Target Start/End: Original strand, 17932328 - 17932373
Alignment:
Q  573 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 618  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  17932328 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgat 17932373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 9526117 - 9526382
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9526117 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactgga 9526216  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9526217 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 9526316  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  9526317 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 9526382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 9521367 - 9521631
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  9521367 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 9521466  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||    | ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9521467 aatttcgtgccacgatggccccgcatcgtgccaagatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 9521566  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9521567 ttac-tttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 9521631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 572 - 838
Target Start/End: Original strand, 2232262 - 2232516
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  2232262 tgtgagagttaacttaaaatcagaaatctggagcatcatgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 2232361  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  ||||||||||||||||           || | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2232362 aaaatcgtgccacgatgaag-----------cagggtc-tcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 2232449  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2232450 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 2232516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 571 - 837
Target Start/End: Complemental strand, 21353858 - 21353612
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  21353858 gtgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 21353759  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaa-taaaacgtattttcagttagatttgtttcagttttttaagg 769  Q
    || |||||||||                     ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21353758 aattttcgtgcc---------------------acgatgggcgcgctgaagataaaaaataaaacgtattttcagttagatttgtttcagttttttaagg 21353680  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    |||| |||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  21353679 gttttctttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 21353612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 572 - 655
Target Start/End: Complemental strand, 2393812 - 2393729
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  2393812 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttcacgccacgattgttgaagcaagattc 2393729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 572 - 655
Target Start/End: Complemental strand, 2401726 - 2401643
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||||||| |||||||||||||||    
T  2401726 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttttcgccacgattgttgaagcaagattc 2401643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 572 - 655
Target Start/End: Original strand, 2617280 - 2617363
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||| |||||||| |||||||||| ||||    
T  2617280 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagtttcgtgccacgattgttgaagcaaaattc 2617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 572 - 653
Target Start/End: Original strand, 25133681 - 25133762
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 653  Q
    ||||||||||||||||||||||| ||||||||| | |||| ||||||||||||||| || |||||||| |||||||||||||    
T  25133681 tgtgagagttaacttaaaatcaggaatctggagaaacgtgtcacgatggagaagcaacgtgccacgattgttgaagcaagat 25133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 639
Target Start/End: Complemental strand, 23689384 - 23689317
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgat 639  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||    
T  23689384 tgtgagagttaacttaaaatcaaaaatctagagaatcatgccacgatggagaagcatcgcgccacgat 23689317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 804
Target Start/End: Complemental strand, 13449941 - 13449856
Alignment:
Q  720 agataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttacttttcactataaatacag-ccttgtatcag 804  Q
    |||||||||||||||||||||| | | | ||||||||||||||||||||||| | || |||||||||||||| || |||||||||||    
T  13449941 agataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggataac-tttcactataaatatagaccttgtatcag 13449856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 805
Target Start/End: Original strand, 2617403 - 2617490
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||||||||||   |  |||||||||||||| || ||||||||||||    
T  2617403 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaaggg---atctttcactataaatatagaccttgtatcaga 2617490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 11115041 - 11115092
Alignment:
Q  30 acaagaaacaatcaagtcagttatctcatagaattgtcaacttaattaaaca 81  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||||||||    
T  11115041 acaagaaacaattgagtcagttatctcatacaattgtcaactaaattaaaca 11115092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 578 - 838
Target Start/End: Original strand, 1170470 - 1170730
Alignment:
Q  578 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttc 677  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||    
T  1170470 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacaatggctgaagcaagattcctgggcagacactgaaaatttc 1170569  T
Q  678 gtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactt 777  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1170570 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactt 1170669  T
Q  778 ttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1170670 tctactataaatatagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 1170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 25452146 - 25452411
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||  ||||||    
T  25452146 tgtgagagttaacttaaaattagaaatatggagaatcgtgccacgatggagaagcatcgcgccacgattgatgaagcaagattcctgggaagctactgga 25452245  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||||| |   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25452246 aatttcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 25452345  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25452346 ttactttccactataaatacagccttgtattagatgataaaagtgtgtagaaaaacaaggtttaga 25452411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 2298528 - 2298267
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||   |||||  ||||||    
T  2298528 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgactgttgaagcaagattctgaggaagctactgga 2298429  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||  |||| ||| ||| ||| |   ||| ||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||||    
T  2298428 aaaatcgtaccatgataaagccgtgtcgtgccacgatggtcgcgctgaagata----taaaacgtattttcagttagatttgttttagttttttaagggt 2298333  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2298332 ttactttccactataaatacagccttgtatcatatgataaaagtgtgtagaaaaacaaggtttaga 2298267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 35385962 - 35385718
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  35385962 tgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 35385863  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||||||||||||                     ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  35385862 aatttcgtgccacg---------------------atggtcgcgctaaagataaaaataaaaagtattttcagtttgatttgtttcagttttttaagggt 35385784  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||| ||||| ||||||||||||||||||| |||||||    
T  35385783 ttactttccactataaatataagccttgtatcaaatgat-aaagtgtgtagaaaaacaaagtttaga 35385718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 22672504 - 22672750
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||||| |||||| ||||||| || |||||||||||||||   || ||  ||||||    
T  22672504 tgtgagagttaacttaaaattagaattctggagaatcgtgccacgatggaaaagcattgcgccacaattgttgaagcaagattctgagggagttactgga 22672603  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcag--ttttttaagg 769  Q
    |||||||||||                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  22672604 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaatgtattttcagttagatttgtttcagttttttttaagg 22672682  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  22672683 gtttactttccactataaatagaagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 22672750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 40222414 - 40222679
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||    | || ||| |||    
T  40222414 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattctgaagcagtcacagga 40222513  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 770  Q
    ||  |||||||||||||||  | || || | |||||||||     ||| |||||||  ||||||| ||||||||  | |||||||||| |||||||| ||    
T  40222514 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggtacgattgaggataaaataaaaacgtgttttcagtgaaaatttgtttcaattttttaaagg 40222613  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
     |||| ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||    
T  40222614 attac-tttcactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacaaggtttaga 40222679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 42237954 - 42238219
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||     | || |||||||    
T  42237954 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattttgaagcagtcactgga 42238053  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  |||||||||||||||  | || || | ||||||||| |||  ||| |||||||  ||||||||||||||||  |||||||||||| |||||||| |    
T  42238054 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggt-gcgattgaggataaaacaaaaacgtattttcagtgaagatttgtttcaattttttaaag 42238152  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    | ||||||| |||||||||||  | |||||||||| ||||| |||||||||||||||||| ||||||||    
T  42238153 ggttactttccactataaatataaaccttgtatca-atgat-aaagtgtgtagaaaaacagggtttaga 42238219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 1240078 - 1240344
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  1240078 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 1240177  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 770  Q
    ||  ||||||||||||     |  |||| |||||||||||     ||||||||||||||||||||||||| | |  | |||||||||||||||||||| |    
T  1240178 aaaatcgtgccacgattggatcgaatcgtgccacgatggtgcaattgaagataaaaataaaacgtatttttattgaacatttgtttcagttttttaagag 1240277  T
Q  771 tttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
     |||||||  ||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  1240278 gttactttctactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 1240344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 734 - 837
Target Start/End: Original strand, 25445305 - 25445408
Alignment:
Q  734 cgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtt 833  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  25445305 cgtattttcagttagatttgtttcagttttttaagggtttaccttccactataaatacagtcttgtatcagatgataaaagtgtgtagataaacaaggtt 25445404  T
Q  834 taga 837  Q
    ||||    
T  25445405 taga 25445408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 572 - 805
Target Start/End: Original strand, 6747044 - 6747278
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  6747044 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 6747143  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  ||||||||||||     |  |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  6747144 aaagtcgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 6747242  T
Q  770 gtttacttttcactataaatacag-ccttgtatcaga 805  Q
    | |||| |||||||||||||| || ||||||||||||    
T  6747243 gattac-tttcactataaatatagaccttgtatcaga 6747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 571 - 805
Target Start/End: Complemental strand, 10529639 - 10529404
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| |||||||| |||||||||| ||||  | | |  ||||||    
T  10529639 gtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatcgagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgg 10529540  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaag 768  Q
    |||  |||||||||||| |   |  |||| ||||||||| | |||  ||||||||||||||||||||||||| | |  |||||| |||||||||||||||    
T  10529539 aaaaatcgtgccacgattagatcgaatcgtgccacgatgat-gcgattgaagataaaaataaaacgtatttttattgaagatttatttcagttttttaag 10529441  T
Q  769 ggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    || |||| |||||||||||||| || ||||||||||||    
T  10529440 ggattac-tttcactataaatatagaccttgtatcaga 10529404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 805
Target Start/End: Original strand, 6744800 - 6745035
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| | ||| |||||||| |||||||||| ||||  | | |  ||||||    
T  6744800 gtgtgagagttaatttaaaatcagaattctggagaatcgtgccacgatggagaaacttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 6744899  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttca-gttagatttgtttcagttttttaag 768  Q
    |||  ||||||||||||     |  |||| || |||||||| |||  ||||||||||||||||||||||||| |    ||||||||||||||||||||||    
T  6744900 aaaaatcgtgccacgattggatcgaatcgtgctacgatggt-gcgattgaagataaaaataaaacgtatttttatcgaagatttgtttcagttttttaag 6744998  T
Q  769 ggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    || |||| |||||||||||||| || ||||||||||||    
T  6744999 ggattac-tttcactataaatatagaccttgtatcaga 6745035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 572 - 657
Target Start/End: Original strand, 25445219 - 25445304
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcct 657  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||| | |||||||||||||||    
T  25445219 tgtgagagttaacttaaaattagaaatctggagaatcgtaccatgatggagaagcatcgcgccacgattgatgaagcaagattcct 25445304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 572 - 805
Target Start/End: Original strand, 4409797 - 4410031
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||| ||||||||||||||||||  |||| || |||||||||||||| |||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  4409797 tgtgaaagttaacttaaaatcagagttctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 4409896  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 769  Q
    ||  ||||||||| ||     |  |||| ||||||||||| ||| | | |||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  4409897 aaaatcgtgccacaattggatcgaatcgtgccacgatggt-gcgatggcagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 4409995  T
Q  770 gtttacttttcactataaatacag-ccttgtatcaga 805  Q
    | |||| |||||||||||||| || ||||||||||||    
T  4409996 gattac-tttcactataaatatagaccttgtatcaga 4410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 574 - 805
Target Start/End: Original strand, 39854226 - 39854458
Alignment:
Q  574 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 673  Q
    |||||||||||||||||| |||| ||||||| |||||| || ||| ||||||  ||| |||||||| |||||||||| ||||  | | |  |||||||||    
T  39854226 tgagagttaacttaaaattagaattctggagaatcgtgtcatgatagagaagtttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 39854325  T
Q  674 tttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggt 771  Q
      ||||| |||| |  |  | ||||| | ||||||||| ||| | |||||||||||||||||||||||| | | | |||||||||||||||||||||||     
T  39854326 aatcgtgtcacggttgaatcgcatcgtggcacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaaggga 39854424  T
Q  772 ttacttttcactataaatacag-ccttgtatcaga 805  Q
    |||| |||||||||||||| || ||||||||||||    
T  39854425 ttac-tttcactataaatatagaccttgtatcaga 39854458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 577 - 627
Target Start/End: Complemental strand, 17841816 - 17841766
Alignment:
Q  577 gagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagca 627  Q
    ||||||| |||||||||| ||||||||| | |||| |||||||||||||||    
T  17841816 gagttaatttaaaatcaggaatctggagaaacgtgtcacgatggagaagca 17841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 198; Significance: 1e-107; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 15976 - 16241
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||| ||    
T  15976 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagcttcctgggaagctactaga 16075  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||||||||    | ||||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  16076 aatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctgaagataaaataaaaacgtatttttagttagatttgtttcagttttttaagggt 16175  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16176 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacagggtttaga 16241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 574 - 838
Target Start/End: Original strand, 30795 - 31060
Alignment:
Q  574 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 673  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  30795 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccaggatggttgaagcaagattcctgggaagctactggaaa 30894  T
Q  674 tttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaagggtt 772  Q
      ||||||||||||||||     ||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  30895 aatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgttgaagataaaaataaaatgtatttttcagttagatttgtttcagttttataagggtt 30994  T
Q  773 tacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30995 tactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 31060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 166; Significance: 2e-88; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 589 - 838
Target Start/End: Original strand, 224510 - 224738
Alignment:
Q  589 aatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatg 688  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  224510 aatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgcc------ 224603  T
Q  689 aagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttacttttcactataaa 788  Q
                   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  224604 ---------------acgatgatcgcgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggttttctttccactataaa 224688  T
Q  789 tacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 838  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  224689 tacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagac 224738  T

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Target: scaffold1764 (Bit Score: 154; Significance: 3e-81; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 572 - 837
Target Start/End: Original strand, 1108 - 1352
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||    
T  1108 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcttgggaagctactgga 1207  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    ||||| |||||                     ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  1208 aattttgtgcc---------------------acgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttgagggt 1286  T
Q  772 ttacttttcactataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1287 ttactttccaatataaatacagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 1352  T

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Target: scaffold0209 (Bit Score: 151; Significance: 2e-79; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 572 - 837
Target Start/End: Complemental strand, 17496 - 17252
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  17496 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatagagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 17397  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 771  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17396 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 17318  T
Q  772 ttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||| |||||||||||  |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  17317 ttactttccactataaatataagccttgtatcagatgat-aaagagtgtagaaaaacagggtttaga 17252  T

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Target: scaffold0004 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 571 - 837
Target Start/End: Complemental strand, 188754 - 188508
Alignment:
Q  571 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 670  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    ||||   ||| |    
T  188754 gtgtgagagttaacttaaaattagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattatgaggaaactactag 188655  T
Q  671 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaagg 769  Q
    ||||||||||||||||||      |||||                |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  188654 aaatttcgtgccacgatg-----gcatcg----------------ctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 188576  T
Q  770 gtttacttttcactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 837  Q
    ||||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  188575 gtttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaacagggtttaga 188508  T

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Target: scaffold0038 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 572 - 805
Target Start/End: Complemental strand, 42022 - 41788
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 671  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| |||||||| |||| ||||| | | ||||| | ||||||||    
T  42022 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaa-agttctgggcaaacactgga 41924  T
Q  672 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcag-ttttttaag 768  Q
    ||  ||||||||||||     |  |||| |||||||| || |||  ||||||||||||||||||||||||| | |  | ||||||||||| |||||||||    
T  41923 aaaatcgtgccacgattgtatcgaatcgtgccacgatagt-gcgattgaagataaaaataaaacgtatttttattgaaaatttgtttcagtttttttaag 41825  T
Q  769 ggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    || |||| |||||||||||||| || ||||||||||||    
T  41824 ggattac-tttcactataaatatagaccttgtatcaga 41788  T

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Target: scaffold0552 (Bit Score: 56; Significance: 9e-23; HSPs: 2)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 572 - 655
Target Start/End: Complemental strand, 1349 - 1266
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 655  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||| |||||||||| ||||    
T  1349 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattc 1266  T

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Target: scaffold0552; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 805
Target Start/End: Complemental strand, 1225 - 1136
Alignment:
Q  717 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttacttttcactataaatacag-ccttgtatcaga 805  Q
    ||||||||||||||||||||||||| | |  |||||||||||| ||| ||||||| |||| |||||||||||||| || ||||||||||||    
T  1225 tgaagataaaaataaaacgtatttttattgaagatttgtttcaatttgttaagggattac-tttcactataaatatagaccttgtatcaga 1136  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 612
Target Start/End: Original strand, 120569 - 120609
Alignment:
Q  572 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 612  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  120569 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 120609  T

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Target: scaffold0691 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 571
Target Start/End: Original strand, 4252 - 4336
Alignment:
Q  487 tttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtagg 571  Q
    |||||| || |||||||||| || |||||| || ||||||||  ||| |||||| ||||||||||||||| ||| ||||| ||||    
T  4252 tttactttactcaagcgactaagattcagtgtcatcaattttttaaatcctccactttgaaaatgcaaaacttcgccatcatagg 4336  T

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