View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2727_high_25 (Length: 295)
Name: NF2727_high_25
Description: NF2727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2727_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39563253 - 39563475
Alignment:
| Q |
1 |
acagaaagccagcaattttttatgatctgctcagaacaaattaaatagattcttaaatcattggggtatattcagaaggaagggggacacaagcagtgac |
100 |
Q |
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| T |
39563253 |
acagaaagccagcaattttttatgatctgctcagaacaaattaaatagattcttaaatcattggggtatattcagaaggaagggggacacaagcagtgac |
39563352 |
T |
|
| Q |
101 |
aggtctattcaatcaaagccaaaagaagcgttatgttgtcttatttgatctattggagaaattttatgtcccatctattcaatttcactagaatgaactc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
39563353 |
aggtctattcaatcaaagccaaaagaagcgttatgttgtcttatttgatctattggagaaattttatgtcccatctattcagtttcactagaatgaactc |
39563452 |
T |
|
| Q |
201 |
tgttagaatatttctttaatggg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
39563453 |
tgttagaatatttctttaatggg |
39563475 |
T |
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