View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2728R-Insertion-4 (Length: 921)
Name: NF2728R-Insertion-4
Description: NF2728R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2728R-Insertion-4 |
 | |
|
| [»] chr5 (5 HSPs) |
| |
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| [»] chr4 (7 HSPs) |
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| [»] chr2 (1 HSPs) |
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| [»] chr3 (3 HSPs) |
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| [»] chr6 (4 HSPs) |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 562; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 562; E-Value: 0
Query Start/End: Original strand, 5 - 610
Target Start/End: Complemental strand, 32224384 - 32223772
Alignment:
| Q |
5 |
atcatgatggatccgttgacccgacccgttgttgttgtctcctttcacgttgacaaaccctagctcatcttcaacacctgccatgaaaccacacgcctcg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32224384 |
atcatgatggatccgttgacccgacccgttgttgttgtctcctttcacgttgacaaaccctagctcatcttcaacacctgccatgaaaccacacgcctcg |
32224285 |
T |
|
| Q |
105 |
gttttctgaaccacaactttcttcttaccttctccctcatccatcatcattgctatctatctactttctctttctctctctttggttctgagtgtttgtg |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32224284 |
gttttctgaaccacaactttcttcttaccttctccctcatccatcatcattgctatctatctactttctctttctctctctttggttctgagtgtttgtg |
32224185 |
T |
|
| Q |
205 |
cagataatatgaacgacgctcggcaatcacgaaatgggttttgggtttggtgttaataaaacagatcaatggtgtaactagttgagtggaagaagtgaaa |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32224184 |
cagataatatgaacgacgctcggcaatcacgaaatgggttttgggtttggtgttaataaaacagatcaatggtgtaactagttgagtggaagaagtgaaa |
32224085 |
T |
|
| Q |
305 |
gttgagtagtggatggatgattctgttttttgttctatttttagcaacaacaaggatttttgtgaaaacagtgaaacatttttatgacatttgtgcaatc |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32224084 |
gttgagtagtggatggatgattctgttttttgttctatttttagcaacaacaaggatttttgtgaaaacagtgaaacatttttatgacatttgtgcaatc |
32223985 |
T |
|
| Q |
405 |
tgtattcaatcctctccctttacttttaccatcatgatannnnnnncatgacaagttcttagctgtaaatgggttatgggtaatgggtaagttaagttat |
504 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32223984 |
tgtattcaatcctctccctttacttttaccatcatgatatttttttcatgacaagttcttagctgtaaatgggttatgggtaatgggtaagttaagttat |
32223885 |
T |
|
| Q |
505 |
tagtctctcaactatag-------tacatacatacatatacttgtgaatatgaaccaaatgttatgaccggattcattggttgttttaattttgttttgg |
597 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32223884 |
tagtctctcaactatagtagtacatacatacatacatatacttgtgaatatgaaccaaatgttatgaccggattcattggttgttttaattttgttttgg |
32223785 |
T |
|
| Q |
598 |
ctttttctgtgaa |
610 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
32223784 |
ctttttctttgaa |
32223772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 297; Significance: 1e-166; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 605 - 921
Target Start/End: Original strand, 41718154 - 41718473
Alignment:
| Q |
605 |
tgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggctttgcaatttacc |
704 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41718154 |
tgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggttttgcaatttacc |
41718253 |
T |
|
| Q |
705 |
attcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttacgg |
804 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718254 |
attcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttacgg |
41718353 |
T |
|
| Q |
805 |
tcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaac-agtaaagcttgtttagatagtgagag--aaaatata |
901 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
41718354 |
tcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatata |
41718453 |
T |
|
| Q |
902 |
gagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
41718454 |
gagaggaaaaatagtttctc |
41718473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 605 - 921
Target Start/End: Original strand, 41722880 - 41723199
Alignment:
| Q |
605 |
tgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggctttgcaatttacc |
704 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41722880 |
tgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggttttgcaatttacc |
41722979 |
T |
|
| Q |
705 |
attcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttacgg |
804 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722980 |
attcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttacgg |
41723079 |
T |
|
| Q |
805 |
tcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaac-agtaaagcttgtttagatagtgagag--aaaatata |
901 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
41723080 |
tcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatata |
41723179 |
T |
|
| Q |
902 |
gagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
41723180 |
gagaggaaaaatagtttctc |
41723199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 839 - 921
Target Start/End: Original strand, 34352226 - 34352311
Alignment:
| Q |
839 |
tcatcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
34352226 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagagaaaaattagtttctc |
34352311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 839 - 921
Target Start/End: Original strand, 34359934 - 34360019
Alignment:
| Q |
839 |
tcatcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
34359934 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagagaaaaattagtttctc |
34360019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 839 - 921
Target Start/End: Complemental strand, 29585640 - 29585554
Alignment:
| Q |
839 |
tcatcccaaatcagtaacaacacaagaac-agtaaagcttgtttaga-tagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
29585640 |
tcatcccaaatcagtaacaacacaacaacaagtaaagcttgtctagagtagtgagaggaaaaatatagagagaaaaattagtttctc |
29585554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 99; Significance: 2e-48; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 771 - 921
Target Start/End: Complemental strand, 48702228 - 48702075
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaac-ag |
869 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
48702228 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
48702129 |
T |
|
| Q |
870 |
taaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
48702128 |
taaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
48702075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 771 - 921
Target Start/End: Complemental strand, 48697539 - 48697386
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaac-ag |
869 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
48697539 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcattattctactcatcccaaatcagtaacaacacaagaacaag |
48697440 |
T |
|
| Q |
870 |
taaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
48697439 |
taaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
48697386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 840 - 921
Target Start/End: Complemental strand, 24520363 - 24520279
Alignment:
| Q |
840 |
catcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24520363 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
24520279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 841 - 921
Target Start/End: Original strand, 42265883 - 42265966
Alignment:
| Q |
841 |
atcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
42265883 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagcttctc |
42265966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 841 - 921
Target Start/End: Original strand, 42270602 - 42270685
Alignment:
| Q |
841 |
atcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
42270602 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagcttctc |
42270685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 771 - 868
Target Start/End: Complemental strand, 30945901 - 30945804
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaaca |
868 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
30945901 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaattagtaacaacaccagaaca |
30945804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 771 - 861
Target Start/End: Complemental strand, 30950607 - 30950517
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacac |
861 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30950607 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaattagtaacaacac |
30950517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 771 - 921
Target Start/End: Complemental strand, 5199062 - 5198909
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaac-ag |
869 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5199062 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
5198963 |
T |
|
| Q |
870 |
taaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5198962 |
taaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
5198909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 771 - 921
Target Start/End: Complemental strand, 2817658 - 2817504
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaac-ag |
869 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
2817658 |
ataaatgcaattggttggggcatggctctttcactagtatacatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
2817559 |
T |
|
| Q |
870 |
taaagcttgttta-gatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||| |||||||| | || |||||| |||||||||||||||||||||||||||| |
|
|
| T |
2817558 |
taaaacttgtttagggtaatgagagaaaaaatatagagaggaaaaatagtttctc |
2817504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 839 - 921
Target Start/End: Complemental strand, 5818852 - 5818767
Alignment:
| Q |
839 |
tcatcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5818852 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
5818767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 840 - 921
Target Start/End: Complemental strand, 5823613 - 5823529
Alignment:
| Q |
840 |
catcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5823613 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
5823529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 3e-29; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 839 - 921
Target Start/End: Complemental strand, 26976470 - 26976385
Alignment:
| Q |
839 |
tcatcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26976470 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
26976385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 840 - 921
Target Start/End: Original strand, 1234680 - 1234764
Alignment:
| Q |
840 |
catcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1234680 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
1234764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 841 - 921
Target Start/End: Complemental strand, 27874327 - 27874244
Alignment:
| Q |
841 |
atcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
27874327 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagcttctc |
27874244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 771 - 868
Target Start/End: Complemental strand, 27879134 - 27879037
Alignment:
| Q |
771 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaaca |
868 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
27879134 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaattagtaacaacaccagaaca |
27879037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 840 - 921
Target Start/End: Complemental strand, 9439710 - 9439626
Alignment:
| Q |
840 |
catcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9439710 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
9439626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 840 - 921
Target Start/End: Complemental strand, 9444430 - 9444346
Alignment:
| Q |
840 |
catcccaaatcagtaacaacacaagaaca-gtaaagcttgtttagatagtgagag--aaaatatagagaggaaaaatagtttctc |
921 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9444430 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagatagtgagagaaaaaatatagagaggaaaaatagtttctc |
9444346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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