View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2728_low_12 (Length: 383)

Name: NF2728_low_12
Description: NF2728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2728_low_12
NF2728_low_12
[»] chr5 (54 HSPs)
chr5 (16-119)||(35894726-35894830)
chr5 (16-119)||(42501735-42501840)
chr5 (16-119)||(42865980-42866083)
chr5 (129-229)||(36863927-36864029)
chr5 (16-119)||(42257268-42257373)
chr5 (17-115)||(13360352-13360452)
chr5 (16-119)||(39599958-39600067)
chr5 (16-119)||(35894119-35894225)
chr5 (16-119)||(43109430-43109536)
chr5 (16-119)||(13359774-13359879)
chr5 (17-119)||(39599348-39599452)
chr5 (34-119)||(28863282-28863368)
chr5 (28-119)||(1628842-1628935)
chr5 (16-119)||(42866578-42866683)
chr5 (17-119)||(12216162-12216264)
chr5 (28-119)||(42501127-42501221)
chr5 (16-119)||(28864183-28864288)
chr5 (42-119)||(43110271-43110351)
chr5 (34-110)||(1628910-1628988)
chr5 (42-119)||(42258112-42258192)
chr5 (243-321)||(36853247-36853324)
chr5 (34-110)||(42501196-42501275)
chr5 (28-119)||(10432963-10433055)
chr5 (34-110)||(13359842-13359921)
chr5 (34-110)||(28864141-28864220)
chr5 (34-110)||(39599416-39599495)
chr5 (34-110)||(42257336-42257415)
chr5 (43-100)||(24402408-24402465)
chr5 (34-110)||(13360309-13360388)
chr5 (43-99)||(31650405-31650461)
chr5 (34-110)||(43109499-43109578)
chr5 (44-98)||(10433044-10433098)
chr5 (16-103)||(57147-57233)
chr5 (34-82)||(43110234-43110283)
chr5 (34-97)||(57691-57755)
chr5 (34-81)||(42258075-42258123)
chr5 (34-110)||(42866536-42866615)
chr5 (42-119)||(43126616-43126695)
chr5 (28-81)||(1629450-1629504)
chr5 (42-110)||(1629404-1629475)
chr5 (46-110)||(12216131-12216198)
chr5 (34-110)||(35894188-35894266)
chr5 (42-110)||(42866046-42866117)
chr5 (41-110)||(57198-57268)
chr5 (42-119)||(43120003-43120080)
chr5 (45-118)||(6346276-6346352)
chr5 (42-82)||(28863348-28863389)
chr5 (44-103)||(6346993-6347053)
chr5 (34-110)||(42501693-42501772)
chr5 (16-119)||(12215581-12215685)
chr5 (49-103)||(29185034-29185087)
chr5 (44-110)||(39599926-39599995)
chr5 (45-109)||(24402456-24402521)
chr5 (34-119)||(31648412-31648500)
[»] chr2 (65 HSPs)
chr2 (16-119)||(34788826-34788931)
chr2 (16-119)||(31076734-31076840)
chr2 (17-119)||(38816046-38816149)
chr2 (16-119)||(44426225-44426331)
chr2 (16-119)||(2940730-2940835)
chr2 (16-119)||(19974691-19974797)
chr2 (16-119)||(36067638-36067744)
chr2 (16-119)||(31076122-31076228)
chr2 (16-119)||(32525823-32525928)
chr2 (28-119)||(44425628-44425721)
chr2 (16-119)||(32525215-32525321)
chr2 (28-119)||(19975312-19975405)
chr2 (28-119)||(42158913-42159006)
chr2 (16-119)||(22962590-22962696)
chr2 (16-119)||(2940062-2940168)
chr2 (17-103)||(39317583-39317669)
chr2 (16-119)||(36067061-36067167)
chr2 (16-119)||(39318160-39318265)
chr2 (16-110)||(2940670-2940767)
chr2 (16-119)||(34789260-34789364)
chr2 (34-102)||(38815487-38815555)
chr2 (16-119)||(40831337-40831441)
chr2 (16-74)||(42158417-42158475)
chr2 (42-119)||(22961775-22961855)
chr2 (34-110)||(34789218-34789295)
chr2 (15-119)||(42952378-42952481)
chr2 (34-110)||(44425696-44425775)
chr2 (34-110)||(38816004-38816082)
chr2 (34-99)||(1858944-1859009)
chr2 (34-110)||(22962548-22962627)
chr2 (34-110)||(31076191-31076270)
chr2 (34-110)||(36067130-36067209)
chr2 (34-102)||(40831297-40831364)
chr2 (16-97)||(1858467-1858549)
chr2 (42-103)||(19058041-19058103)
chr2 (17-119)||(1858986-1859089)
chr2 (43-103)||(44272943-44273004)
chr2 (34-110)||(32525781-32525860)
chr2 (34-97)||(11823633-11823696)
chr2 (16-119)||(19057964-19058069)
chr2 (34-99)||(19975258-19975324)
chr2 (34-82)||(22961843-22961892)
chr2 (42-110)||(32130398-32130467)
chr2 (34-110)||(2940131-2940210)
chr2 (34-110)||(2940628-2940707)
chr2 (43-99)||(33575421-33575477)
chr2 (17-119)||(40830773-40830872)
chr2 (42-119)||(1294140-1294220)
chr2 (42-103)||(44426191-44426253)
chr2 (34-82)||(38815535-38815584)
chr2 (45-110)||(1858512-1858579)
chr2 (34-110)||(19974760-19974839)
chr2 (34-110)||(39317633-39317712)
chr2 (16-70)||(32130381-32130433)
chr2 (41-99)||(42158866-42158925)
chr2 (42-103)||(42158447-42158509)
chr2 (42-103)||(2236073-2236133)
chr2 (16-73)||(11823598-11823655)
chr2 (70-110)||(40830838-40830878)
chr2 (34-99)||(7759890-7759956)
chr2 (42-98)||(11165510-11165567)
chr2 (34-110)||(32525284-32525364)
chr2 (34-110)||(31076692-31076771)
chr2 (42-110)||(34788894-34788965)
chr2 (42-110)||(36067604-36067675)
[»] chr7 (41 HSPs)
chr7 (16-119)||(42942054-42942158)
chr7 (16-119)||(8295617-8295721)
chr7 (16-119)||(47378510-47378616)
chr7 (16-119)||(1963464-1963569)
chr7 (17-119)||(37399417-37399519)
chr7 (16-118)||(2093921-2094025)
chr7 (28-119)||(28882320-28882414)
chr7 (17-119)||(8294430-8294533)
chr7 (16-103)||(31902578-31902664)
chr7 (28-103)||(1964081-1964157)
chr7 (16-103)||(2094511-2094598)
chr7 (17-119)||(31902039-31902142)
chr7 (28-119)||(42941445-42941539)
chr7 (42-119)||(28883173-28883253)
chr7 (34-110)||(42941514-42941593)
chr7 (34-110)||(1964027-1964106)
chr7 (34-110)||(2094469-2094548)
chr7 (34-110)||(31902106-31902184)
chr7 (42-119)||(33178841-33178919)
chr7 (16-74)||(47379111-47379169)
chr7 (16-119)||(42791791-42791893)
chr7 (34-110)||(8295575-8295654)
chr7 (42-102)||(33179568-33179627)
chr7 (34-110)||(47379069-47379148)
chr7 (34-103)||(1963541-1963611)
chr7 (34-110)||(8294498-8294576)
chr7 (28-119)||(42793095-42793188)
chr7 (34-110)||(28882389-28882468)
chr7 (42-110)||(2093988-2094059)
chr7 (43-103)||(38864874-38864934)
chr7 (42-119)||(42432686-42432765)
chr7 (42-99)||(47378592-47378650)
chr7 (45-98)||(6252729-6252782)
chr7 (44-101)||(34966005-34966061)
chr7 (47-103)||(686158-686213)
chr7 (42-110)||(31902544-31902615)
chr7 (48-103)||(37399388-37399444)
chr7 (43-101)||(6486959-6487017)
chr7 (42-119)||(38865854-38865931)
chr7 (59-103)||(686209-686253)
chr7 (44-100)||(19112953-19113009)
[»] chr4 (33 HSPs)
chr4 (17-115)||(34267747-34267846)
chr4 (16-119)||(51928364-51928468)
chr4 (16-119)||(45753328-45753433)
chr4 (28-119)||(34268334-34268427)
chr4 (16-119)||(50772764-50772868)
chr4 (34-119)||(45752780-45752868)
chr4 (28-119)||(38739233-38739327)
chr4 (28-119)||(41551243-41551337)
chr4 (34-110)||(38739302-38739381)
chr4 (34-103)||(41550695-41550765)
chr4 (34-110)||(34267810-34267889)
chr4 (34-110)||(34268280-34268359)
chr4 (34-110)||(50772831-50772910)
chr4 (42-111)||(32554723-32554793)
chr4 (70-119)||(17603678-17603726)
chr4 (35-103)||(35576735-35576804)
chr4 (63-119)||(40919768-40919825)
chr4 (70-119)||(38739867-38739918)
chr4 (34-110)||(41551189-41551268)
chr4 (28-119)||(56251655-56251747)
chr4 (34-99)||(45753286-45753352)
chr4 (43-103)||(36218115-36218176)
chr4 (34-82)||(45752848-45752897)
chr4 (43-103)||(50053307-50053370)
chr4 (17-119)||(40834702-40834806)
chr4 (41-103)||(40919815-40919878)
chr4 (16-54)||(38739841-38739879)
chr4 (42-103)||(50052625-50052687)
chr4 (34-110)||(51928322-51928401)
chr4 (41-72)||(40834226-40834257)
chr4 (35-100)||(32555318-32555384)
chr4 (16-54)||(40919806-40919843)
chr4 (42-119)||(4768081-4768160)
[»] chr8 (47 HSPs)
chr8 (16-119)||(36180952-36181056)
chr8 (16-119)||(38781832-38781936)
chr8 (16-119)||(38781236-38781342)
chr8 (17-115)||(764391-764492)
chr8 (16-119)||(37707334-37707439)
chr8 (16-119)||(28936957-28937063)
chr8 (16-119)||(28967823-28967929)
chr8 (16-118)||(764989-765093)
chr8 (34-119)||(22202368-22202452)
chr8 (16-119)||(28990427-28990534)
chr8 (17-117)||(22201767-22201870)
chr8 (34-119)||(28937563-28937651)
chr8 (34-119)||(28991030-28991118)
chr8 (34-119)||(28967229-28967315)
chr8 (16-119)||(9513143-9513246)
chr8 (34-110)||(22201834-22201912)
chr8 (34-110)||(28967781-28967860)
chr8 (34-110)||(28990497-28990576)
chr8 (33-119)||(14036668-14036757)
chr8 (34-110)||(764947-765026)
chr8 (48-119)||(17609338-17609410)
chr8 (34-110)||(28937026-28937105)
chr8 (34-110)||(38781305-38781384)
chr8 (34-110)||(764456-764534)
chr8 (42-119)||(37707879-37707955)
chr8 (35-103)||(14786250-14786319)
chr8 (43-108)||(32825495-32825560)
chr8 (42-103)||(32825065-32825127)
chr8 (16-119)||(9513701-9513814)
chr8 (43-103)||(14782528-14782589)
chr8 (34-82)||(28937534-28937583)
chr8 (34-82)||(28967295-28967344)
chr8 (34-82)||(28991001-28991050)
chr8 (17-74)||(36181569-36181626)
chr8 (34-110)||(9513209-9513287)
chr8 (34-110)||(38781790-38781869)
chr8 (41-103)||(36181028-36181091)
chr8 (17-79)||(17608520-17608582)
chr8 (34-99)||(36181526-36181592)
chr8 (44-100)||(34233186-34233243)
chr8 (46-110)||(37707402-37707469)
chr8 (43-102)||(40248034-40248094)
chr8 (42-100)||(9513667-9513726)
chr8 (42-110)||(17608546-17608616)
chr8 (42-110)||(22202347-22202414)
chr8 (45-119)||(30601939-30602012)
chr8 (42-100)||(35560331-35560388)
[»] chr3 (27 HSPs)
chr3 (16-119)||(38853117-38853220)
chr3 (16-119)||(33222013-33222119)
chr3 (28-119)||(38852518-38852611)
chr3 (18-119)||(38929543-38929646)
chr3 (16-119)||(38929017-38929123)
chr3 (17-119)||(23615769-23615873)
chr3 (28-119)||(33222626-33222721)
chr3 (16-119)||(34020279-34020384)
chr3 (17-119)||(50681201-50681304)
chr3 (16-119)||(29252817-29252918)
chr3 (16-119)||(13935174-13935280)
chr3 (16-119)||(29252454-29252556)
chr3 (34-99)||(34020237-34020303)
chr3 (34-99)||(50681281-50681346)
chr3 (34-97)||(33222572-33222636)
chr3 (34-110)||(38852586-38852665)
chr3 (56-119)||(38092733-38092796)
chr3 (16-108)||(13935791-13935885)
chr3 (43-97)||(29252784-29252839)
chr3 (34-103)||(38853075-38853145)
chr3 (35-119)||(465243-465326)
chr3 (42-110)||(33222082-33222153)
chr3 (34-110)||(38929499-38929578)
chr3 (45-119)||(34019756-34019835)
chr3 (41-110)||(13935243-13935315)
chr3 (34-110)||(38929086-38929165)
chr3 (42-99)||(13935757-13935815)
[»] chr1 (36 HSPs)
chr1 (16-119)||(6810501-6810605)
chr1 (16-103)||(6505232-6505319)
chr1 (16-119)||(6811099-6811204)
chr1 (16-119)||(6504668-6504773)
chr1 (16-119)||(5564195-5564300)
chr1 (34-119)||(26616910-26616994)
chr1 (16-103)||(26617483-26617571)
chr1 (28-119)||(52213916-52214008)
chr1 (16-119)||(37596675-37596779)
chr1 (17-74)||(52214526-52214583)
chr1 (33-119)||(7710140-7710226)
chr1 (34-110)||(5564757-5564836)
chr1 (34-101)||(37596997-37597065)
chr1 (34-110)||(37596938-37597016)
chr1 (17-119)||(7708696-7708798)
chr1 (34-110)||(26617441-26617520)
chr1 (49-119)||(30456057-30456127)
chr1 (16-103)||(51247156-51247242)
chr1 (34-110)||(37596742-37596821)
chr1 (34-110)||(52214483-52214562)
chr1 (34-103)||(5564272-5564342)
chr1 (28-74)||(5564811-5564857)
chr1 (42-103)||(14922488-14922550)
chr1 (42-103)||(32473805-32473867)
chr1 (42-103)||(40845411-40845471)
chr1 (42-110)||(51247122-51247191)
chr1 (41-110)||(6504736-6504808)
chr1 (34-110)||(6505190-6505269)
chr1 (41-99)||(6810581-6810640)
chr1 (42-103)||(14922063-14922125)
chr1 (34-82)||(26616974-26617023)
chr1 (34-98)||(30456625-30456688)
chr1 (43-103)||(35166321-35166380)
chr1 (34-110)||(52213983-52214061)
chr1 (42-102)||(45285398-45285460)
chr1 (34-71)||(6811057-6811094)
[»] chr6 (28 HSPs)
chr6 (16-119)||(17335738-17335843)
chr6 (20-119)||(29361606-29361707)
chr6 (16-119)||(17335134-17335239)
chr6 (16-119)||(17192412-17192518)
chr6 (18-119)||(15272874-15272979)
chr6 (16-119)||(31066381-31066484)
chr6 (17-116)||(32754882-32754983)
chr6 (16-119)||(31065799-31065902)
chr6 (34-118)||(17191850-17191936)
chr6 (16-79)||(24814401-24814464)
chr6 (42-119)||(6181129-6181209)
chr6 (17-81)||(29362191-29362255)
chr6 (44-103)||(35051792-35051851)
chr6 (16-81)||(6180603-6180669)
chr6 (43-118)||(15273741-15273824)
chr6 (34-102)||(31066339-31066408)
chr6 (34-110)||(6180632-6180711)
chr6 (34-110)||(17335202-17335281)
chr6 (43-99)||(28924843-28924899)
chr6 (34-110)||(29362148-29362227)
chr6 (35-110)||(17192371-17192449)
chr6 (16-73)||(24813839-24813896)
chr6 (34-110)||(32754840-32754918)
chr6 (34-70)||(15273291-15273327)
chr6 (34-71)||(29361716-29361753)
chr6 (34-110)||(24813859-24813938)
chr6 (34-82)||(17191916-17191965)
chr6 (37-110)||(31065865-31065941)
[»] scaffold0341 (4 HSPs)
scaffold0341 (16-103)||(6910-6997)
scaffold0341 (16-119)||(6351-6456)
scaffold0341 (34-110)||(6868-6947)
scaffold0341 (43-110)||(6419-6489)
[»] scaffold0508 (3 HSPs)
scaffold0508 (28-103)||(404-480)
scaffold0508 (43-110)||(360-429)
scaffold0508 (34-102)||(282-349)
[»] scaffold0025 (2 HSPs)
scaffold0025 (17-119)||(22269-22373)
scaffold0025 (34-98)||(22351-22415)
[»] scaffold0045 (2 HSPs)
scaffold0045 (16-118)||(75237-75342)
scaffold0045 (34-99)||(75318-75384)
[»] scaffold0119 (2 HSPs)
scaffold0119 (42-102)||(17435-17495)
scaffold0119 (42-119)||(18053-18133)


Alignment Details
Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 35894726 - 35894830
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35894726 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggggtaaaattgcat 35894825  T
Q  115 ttaag 119  Q
    |||||    
T  35894826 ttaag 35894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 42501735 - 42501840
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  42501735 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggcgggtaaaattcagattcaatcaaaataggggggtaaaattgca 42501834  T
Q  114 tttaag 119  Q
    ||||||    
T  42501835 tttaag 42501840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 42866083 - 42865980
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag-ggggtaaaattgcat 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  42866083 caaaatccagaatcaataaaaatagagggggtaaaattccaagttttaaaatag-ggggtaaaattcagattcaatcaaaatagcggggtaaaattgcat 42865985  T
Q  115 ttaag 119  Q
    |||||    
T  42865984 ttaag 42865980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 36863927 - 36864029
Alignment:
Q  129 tagttggtggataagtgaaggagaaattaaatggtggtgggaac--ttggcatcaagtacacgaaatggcctaaacttttaacatcacggagatgggctt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  36863927 tagttggtggataagtgaaggagaaattaaatggtggtgggaaccattggcatcaagtacacaaaatggcctaaacttttaacatcacggagatgggttt 36864026  T
Q  227 aaa 229  Q
    |||    
T  36864027 aaa 36864029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 42257373 - 42257268
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgca 113  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  42257373 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggggtaaaattgca 42257274  T
Q  114 tttaag 119  Q
    ||||||    
T  42257273 tttaag 42257268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 13360352 - 13360452
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  13360352 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagaggaggtaaaattcagattcaatcaaaataggggggtaaaattgcat 13360451  T
Q  115 t 115  Q
    |    
T  13360452 t 13360452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 39599958 - 39600067
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaata-----gggggtaaaat 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     |||| ||||||    
T  39599958 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatatgaggggggttaaaat 39600057  T
Q  110 tgcatttaag 119  Q
    ||||||||||    
T  39600058 tgcatttaag 39600067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 35894225 - 35894119
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaataggggg--taaaattgc 112  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  35894225 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaataggggggataaaattgc 35894126  T
Q  113 atttaag 119  Q
    |||||||    
T  35894125 atttaag 35894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 43109536 - 43109430
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  43109536 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggggaggtaaaattcagattcaatcaaaatagggggggtaaaattgc 43109437  T
Q  113 atttaag 119  Q
    |||||||    
T  43109436 atttaag 43109430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 13359879 - 13359774
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  13359879 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggggggatgaaattcagattcaatcaaaataggggggtaaaattgca 13359780  T
Q  114 tttaag 119  Q
    ||||||    
T  13359779 tttaag 13359774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 39599452 - 39599348
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  39599452 aaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggggggataaaattcaaattcaatcaaaataggggggtaaaattgcat 39599353  T
Q  115 ttaag 119  Q
    |||||    
T  39599352 ttaag 39599348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 28863368 - 28863282
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag-ggggtaaaattgcatttaag 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  28863368 aaaatagagggggtaaaattccgaattttaaaataggggggaaaaattcaaattcaatcaaaataggggggtaaaattgcatttaag 28863282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 1628935 - 1628842
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcatttaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  1628935 tcaatcaaaatagagggggtaaaattccgagttttaaaataggaggggtaaaattcatattcaatcaaaataggagggtaaaatcgcatttaag 1628842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 42866578 - 42866683
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag-ggggtaaaattgca 113  Q
    |||||||| || ||||| |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  42866578 caaaatcccgattcaatcaaaatatagggggtaaaattctgagttttaaaataaggggggtaaaattcagattcaatcaaaatagcagggtaaaattgca 42866677  T
Q  114 tttaag 119  Q
    ||||||    
T  42866678 tttaag 42866683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 12216162 - 12216264
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat-agggggtaaaattgcatt 115  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||| ||||| || ||||||||||||| ||| ||||||||||||||    
T  12216162 aaaatccagattcaatcaaaatagagggggtaaaattccaagttttaaaata-gggggcaaaatccaaattcaatcaaaataaggtggtaaaattgcatt 12216260  T
Q  116 taag 119  Q
    ||||    
T  12216261 taag 12216264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 42501221 - 42501127
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42501221 tcaatcaaaatagagggggtaaaattccgaattttaaaataaaaggggtaaaattcagattcaatcaaaatatggggggtaaaattgcatttaag 42501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 28864183 - 28864288
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgca 113  Q
    |||||||| || ||||| ||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||| |||||||  ||| ||||||||||    
T  28864183 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttctaaaatggaagggtaaaattcagattcaattaaaataggagggataaaattgca 28864282  T
Q  114 tttaag 119  Q
    ||||||    
T  28864283 tttaag 28864288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 43110271 - 43110351
Alignment:
Q  42 gggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  43110271 gggggtaaaattccgagttttaaaatagggggggtgaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 43110351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 1628988 - 1628910
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||  |||||||||||||    
T  1628988 aaaatagagggggtaaaattccgagttttaaaataagggggcaaaattccgattcaatcaaaatagagggggtaaaatt 1628910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 42258112 - 42258192
Alignment:
Q  42 gggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcatttaag 119  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  42258112 gggggtaaaatttcgagttttaaaatagggggggtgaaattcagattcaatcaaaataggaggggtaaaattgcatttaag 42258192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 36853247 - 36853324
Alignment:
Q  243 tagcacaaagtgagggagtgaaa-caccatcttttagagcaacggatgcaaaataaataaaaaatggtggagtaaatgca 321  Q
    |||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  36853247 tagcgcaaagtgagggagtgaaaacaccatcttttagagcaacagatgcaaaataa--aaaaaatggtggagtaaatgca 36853324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 42501275 - 42501196
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||  |||||||||||||    
T  42501275 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaatagagggggtaaaatt 42501196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 10433055 - 10432963
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||| |||||| |||| || ||||||||||||||||||||||||||  ||||| || |||||||||||||| |||||||||||| |||||||    
T  10433055 tcaatcaaaataaagggagtgaaattccgagttttaaaataggggggaaaaaatccaaattcaatcaaaataaggggtaaaattgtatttaag 10432963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 13359921 - 13359842
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  13359921 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 13359842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 28864141 - 28864220
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  28864141 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 28864220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 39599495 - 39599416
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  39599495 aaaatagagggggtaaaattccgagttttaaaataaggggggaaaaatcccgattcaatcaaaatagagggggtaaaatt 39599416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 42257415 - 42257336
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  42257415 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 42257336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 24402465 - 24402408
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg 100  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  24402465 ggggtaaaataccgagttttaaaataggggggtaaaatctagattcaatcaaaatagg 24402408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 13360309 - 13360388
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  13360309 aaaatagagggggtaaaattccgagttttaaaataggggaggaaaaatccagaatcaataaaaatagagggggtaaaatt 13360388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 31650405 - 31650461
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag 99  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  31650405 ggggtaaaattccgagttttgaaataggggggtaaaattcaaattcagtcaaaatag 31650461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 43109578 - 43109499
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||| | ||||||||||||||  |||||||||||||    
T  43109578 aaaatagagggggtaaaattccgagttttaaaataagggaggcaaaatcccgattcaatcaaaatagagggggtaaaatt 43109499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 10433098 - 10433044
Alignment:
Q  44 gggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata 98  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  10433098 gggtaaaattccgagttttaaaataagggggcaaaatttagattcaatcaaaata 10433044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 57233 - 57147
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||| ||||||| |||||||  ||||||||||||  ||||||||||||||| ||| ||||| || |||||||||||||||||||    
T  57233 caaaatccataatcaatcaaaatag--ggggtaaaattctcagttttaaaatagggtgggcaaaatccaaattcaatcaaaataggggg 57147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 43110234 - 43110283
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattc 82  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43110234 aaaatagagggggtaaaattccgagttttaaaataaggggggtaaaattc 43110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 57691 - 57755
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaat 97  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||| || |||||||||||||    
T  57691 aaaatagatggggtaaaattccgagttttaaaataggtggggcaaaatccaaattcaatcaaaat 57755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 42258075 - 42258123
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaatt 81  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42258075 aaaatagagggggtaaaattccgagttttaaaataaggggggtaaaatt 42258123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 42866536 - 42866615
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaa--atagggggtaaaatt 110  Q
    ||||||||| |||||||||||||||||||||||| ||||||  ||||| | ||||||||||||  |||||||||||||||    
T  42866536 aaaatagagtgggtaaaattccgagttttaaaataagggggacaaaatcccgattcaatcaaaatatagggggtaaaatt 42866615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 43126616 - 43126695
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    |||||||||||||| |||||||||||||||||||||||| | |||| | ||||||||  ||||| ||||||||| |||||    
T  43126616 gggggtaaaattccaagttttaaaataggggggtaaaatcctgatttagtcaaaataaggggggcaaaattgcacttaag 43126695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 1629450 - 1629504
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaatt 81  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  1629450 tcaatcaaaatagagggggtaaaattccaagttttaaaataggggaggtaaaatt 1629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 1629404 - 1629475
Alignment:
Q  42 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||| ||||||| ||||| |  |||||||||||||  |||||||||||||    
T  1629404 gggggtaaaattccgagttttaaaataaggggggcaaaatcccaattcaatcaaaatagagggggtaaaatt 1629475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 12216131 - 12216198
Alignment:
Q  46 gtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||||||||  |||||||||||||    
T  12216131 gtaaaatttcgagttttaaaataaagggggtaaaatccagattcaatcaaaatagagggggtaaaatt 12216198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 35894266 - 35894188
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||| ||||||||| ||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  35894266 aaaatagagggg-taaaattccaagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 35894188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 42866117 - 42866046
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  42866117 gggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 42866046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 57268 - 57198
Alignment:
Q  41 agggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaatagggggtaaaatt 110  Q
    ||||||||||| ||||||||||||||||| || |  ||||| || | ||||||||||||||||||||||||    
T  57268 agggggtaaaaatccgagttttaaaatagaggagacaaaatccataatcaatcaaaatagggggtaaaatt 57198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 43120080 - 43120003
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat-agggggtaaaattgcatttaag 119  Q
    |||||||| ||||||| ||||||||||| ||||||||||| ||||||| ||||||| | ||||||||| |||| |||||    
T  43120080 gggggtaatattccgaattttaaaatag-ggggtaaaatttagattcagtcaaaataaaggggtaaaactgcacttaag 43120003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 6346352 - 6346276
Alignment:
Q  45 ggtaaaattcc-gagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcatttaa 118  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||| |||||||||  |||| ||||||||| ||||    
T  6346352 ggtaaaattccagagttttaaaatagggagttaaaattccgattcagtcaaaataggaggggcaaaattgcacttaa 6346276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 28863389 - 28863348
Alignment:
Q  42 gggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  28863389 gggggtaaaattccgagttttaaaatagagggggtaaaattc 28863348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 6346993 - 6347053
Alignment:
Q  44 gggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||| ||||||| |||||||||||||  |||||||| |||||||| |||||||||||||    
T  6346993 gggtaatattccgaattttaaaatagggaaggtaaaatccagattcagtcaaaataggggg 6347053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 42501693 - 42501772
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| |||||||||||||| |||| ||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  42501693 aaaatagggggggtaaaattccaagttctaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 42501772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 12215685 - 12215581
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgca 113  Q
    ||||||| ||||||||| ||||||| ||||||||| |||||||||||| || || |||| | ||| || |||| || ||||||  |||||||||| ||||    
T  12215685 caaaatcaagaatcaatgaaaatag-gggggtaaatttccgagttttataaaagtggggcacaatccaaattcgataaaaataaggggggtaaaactgca 12215587  T
Q  114 tttaag 119  Q
     |||||    
T  12215586 cttaag 12215581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 29185087 - 29185034
Alignment:
Q  49 aaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||    
T  29185087 aaattccaagttttaaaataggggg-taaaattccgattcagtcgaaataggggg 29185034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 39599926 - 39599995
Alignment:
Q  44 gggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||| |||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  39599926 gggtaaaattccaagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 39599995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 24402521 - 24402456
Alignment:
Q  45 ggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatagggggtaaaat 109  Q
    ||||||||||||| |||||||||||| |||| ||||| || || | ||||||||| ||||||||||    
T  24402521 ggtaaaattccgaattttaaaataggaggggcaaaatccaaatacgatcaaaatatggggtaaaat 24402456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 31648500 - 31648412
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    |||||||| ||||||||||||  |||||| ||||||  |||||||||||||||||   ||||||||  |||||||||| |||| |||||    
T  31648500 aaaatagaaggggtaaaattcaaagttttgaaatagaaggggtaaaattcagattttgtcaaaataaggggggtaaaactgcacttaag 31648412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 34788931 - 34788826
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgca 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34788931 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggggtaaaattgca 34788832  T
Q  114 tttaag 119  Q
    ||||||    
T  34788831 tttaag 34788826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 31076734 - 31076840
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  31076734 caaaatccagaatcaataaaaatagagggggtaaaattccgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 31076833  T
Q  113 atttaag 119  Q
    |||||||    
T  31076834 atttaag 31076840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 38816046 - 38816149
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata-gggggtaaaattgcatt 115  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38816046 aaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggggtaaaattgcatt 38816145  T
Q  116 taag 119  Q
    ||||    
T  38816146 taag 38816149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 44426225 - 44426331
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  44426225 caaaatccagaatcaataaaaatagggggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 44426324  T
Q  113 atttaag 119  Q
    |||||||    
T  44426325 atttaag 44426331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 2940730 - 2940835
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgca 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||    
T  2940730 caaaatccagaaccaataaaaatagagggggtaaaattccgagttttaaaatagtgggataaaattcagattcaatcaaaataggaggggtaaaattgca 2940829  T
Q  114 tttaag 119  Q
    ||||||    
T  2940830 tttaag 2940835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 19974797 - 19974691
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  19974797 caaaatccagaatcaataaaaataggaggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 19974698  T
Q  113 atttaag 119  Q
    |||||||    
T  19974697 atttaag 19974691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 36067638 - 36067744
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||  ||||||||||||||    
T  36067638 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggagaggtaaaattcagattcaattaaaatagggggggtaaaattgc 36067737  T
Q  113 atttaag 119  Q
    |||||||    
T  36067738 atttaag 36067744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 31076228 - 31076122
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  31076228 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 31076129  T
Q  113 atttaag 119  Q
    |||||||    
T  31076128 atttaag 31076122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 32525823 - 32525928
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaatag-ggggtaaaattgca 113  Q
    |||||||| || ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  32525823 caaaatcccgattcaatcaaaatagagggggtaaaattccaagttttaaaataggggggataaaattcagattcaatcaaaatagaggggtaaaattgca 32525922  T
Q  114 tttaag 119  Q
    ||||||    
T  32525923 tttaag 32525928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 44425721 - 44425628
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcatttaag 119  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44425721 tcaatcaaaatagagggggtaaaattccgagttttaaaataaggggggtaaaattcagattcaatcaaaataggagggtaaaattgcatttaag 44425628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 32525321 - 32525215
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaat--agggggtaaaattgc 112  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  32525321 caaaatccagaaccaataaaaatagaaggggtaaaattccgaattttaaaatagagggggtaaaattcagattcaatcaaaatagaggggataaaattgc 32525222  T
Q  113 atttaag 119  Q
    |||||||    
T  32525221 atttaag 32525215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 19975312 - 19975405
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  19975312 tcaatcaaaatagaggaggtaaaattccgagttttaaaatagggaggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 19975405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 42158913 - 42159006
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42158913 tcaatcaaaatagaggaggtaaaattccgagttttgaaataggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 42159006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 22962590 - 22962696
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||| ||||||||    
T  22962590 caaaatcccgattcaatcaaaatagagggggtaaaattccaagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggnaaaattgc 22962689  T
Q  113 atttaag 119  Q
    |||||||    
T  22962690 atttaag 22962696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 2940168 - 2940062
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaat--agggggtaaaattgc 112  Q
    |||||||| || ||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  2940168 caaaatcccgattcaatcaaattagagggggtaaaattccgaattttaaaatagagggggtaaaattcagattcaatcaaaatagagggggtaaaattgc 2940069  T
Q  113 atttaag 119  Q
    |||||||    
T  2940068 atttaag 2940062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 39317669 - 39317583
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||    
T  39317669 aaaatccagaatcaatcaaaatagagggggtaaaattccaagttttaaaataggggggcaaaattcaaattcaatcaaaatgggggg 39317583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 36067167 - 36067061
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  | |||||||||| |    
T  36067167 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaatagaaggggtaaaattcagattcaatcaaaatatggagggtaaaattac 36067068  T
Q  113 atttaag 119  Q
    |||||||    
T  36067067 atttaag 36067061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 39318160 - 39318265
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgca 113  Q
    ||||||| |||||| || |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||| ||||||||||    
T  39318160 caaaatctagaatcgatcaaaataaagggggtaaaattccgagttttaaaataggggggtaaaatccaaattcaatcaaaataagggggataaaattgca 39318259  T
Q  114 tttaag 119  Q
     |||||    
T  39318260 cttaag 39318265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 2940670 - 2940767
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||  |||| |||||  |||||||||||||    
T  2940670 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggaggcaaaatccagaaccaataaaaatagagggggtaaaatt 2940767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 34789260 - 34789364
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||  | || |||||||||    
T  34789260 caaaatcccgattcaatcaaaatagaggg--taaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatatggaggataaaattgc 34789357  T
Q  113 atttaag 119  Q
    |||||||    
T  34789358 atttaag 34789364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 38815555 - 38815487
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggg 102  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  38815555 aaaatagagggggtaaaattccaagttttaaaataggggggcaaaattcaaattcaatcaaaatagggg 38815487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 40831337 - 40831441
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcat 114  Q
    |||||| |||||||||| ||||||| || ||||||||||  |||||||||||| |||||||||||||| ||| |||||||||||| |||||||| |||||    
T  40831337 caaaattcagaatcaatcaaaataggggaggtaaaattctaagttttaaaataagggggtaaaattcaaatttaatcaaaataggagggtaaaactgcat 40831436  T
Q  115 ttaag 119  Q
    |||||    
T  40831437 ttaag 40831441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 42158475 - 42158417
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg 74  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42158475 caaaatccagaatcaataaaaatagggggggtaaaattccgagttttaaaatagggggg 42158417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 22961855 - 22961775
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaat--agggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||   |||||||||||||||||||||    
T  22961855 gggggtaaaattccgagttttaaaatagggggggtgaaattcagattcaatcaaaatcgggggggtaaaattgcatttaag 22961775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 34789218 - 34789295
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatagggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||| ||||||||||    
T  34789218 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggtaaaatt 34789295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 42952481 - 42952378
Alignment:
Q  15 tcaaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcat 114  Q
    |||||||| ||||||||| ||||||| |||| |||||||||||||||||| ||||| ||| ||||| || ||||||||||||||| |||||||| ||||     
T  42952481 tcaaaatctagaatcaatcaaaatag-ggggataaaattccgagttttaagataggagggcaaaatccaaattcaatcaaaatagagggtaaaactgcac 42952383  T
Q  115 ttaag 119  Q
    |||||    
T  42952382 ttaag 42952378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 44425775 - 44425696
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||  |||||||||||||    
T  44425775 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaatagagggggtaaaatt 44425696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 38816004 - 38816082
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||  |||||||||||||    
T  38816004 aaaatagaggtggtaaaattccgagttttaaaataagggggtaaaatcccgattcaatcaaaatagagggggtaaaatt 38816082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 1858944 - 1859009
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag 99  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||    
T  1858944 aaaatagagggggtaaaattcaaagttttaaaataggggggtaaaatccagaatcaatcaaaatag 1859009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 22962548 - 22962627
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  22962548 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 22962627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 31076270 - 31076191
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  31076270 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 31076191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 36067209 - 36067130
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  36067209 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 36067130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 40831297 - 40831364
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggg 102  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||    
T  40831297 aaaatagagagggtaaaattccgagttttaaaata-gggggcaaaattcagaatcaatcaaaatagggg 40831364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 1858549 - 1858467
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaat 97  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||| |||||    
T  1858549 caaaatccaaattcaatcaaaatagagggggtaaaattccgagttttaaaatagggaggaaaaaattcaaattcaataaaaat 1858467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 19058103 - 19058041
Alignment:
Q  42 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  19058103 gggggtaaaattccgagttttaaaataaggggggcaaaattcagaatcaatcaaaataggggg 19058041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 1858986 - 1859089
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcat 114  Q
    |||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||  |||||  | ||||||||||||||  |||||||||| ||||     
T  1858986 aaaatccagaatcaatcaaaatagaagaggtaaaattccgagttttaaaata-ggggacaaaatctaaattcaatcaaaatagtgggggtaaaactgcac 1859084  T
Q  115 ttaag 119  Q
    |||||    
T  1859085 ttaag 1859089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 44273004 - 44272943
Alignment:
Q  43 ggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  44273004 ggggtaaaattccgagttttaaaataagggaggtaaaattcagattcagtcaaaataggggg 44272943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 32525781 - 32525860
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||||||  |||||||||||||    
T  32525781 aaaatagagggggtaaaattccgagttttaaaatatggagggcaaaatcccgattcaatcaaaatagagggggtaaaatt 32525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 11823696 - 11823633
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat 97  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||    
T  11823696 aaaacagagggggtaaaattccgagttttaaaataagggggcaaaatccaaattcaatcaaaat 11823633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 19058069 - 19057964
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggg-gtaaaattcagattcaatcaaaataggg--ggtaaaattgc 112  Q
    |||||| |||||||||| ||||||| |||| ||||||||  ||||||||||||| ||| ||||||| || |||||||||||||||||  ||||||| |||    
T  19058069 caaaattcagaatcaatcaaaatag-ggggataaaattcttagttttaaaatagagggagtaaaatccaaattcaatcaaaataggggaggtaaaactgc 19057971  T
Q  113 atttaag 119  Q
    |||||||    
T  19057970 atttaag 19057964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 19975258 - 19975324
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag 99  Q
    |||||||||||||||||||| ||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  19975258 aaaatagagggggtaaaatttcgagttttaaaataaagggggcaaaattccgattcaatcaaaatag 19975324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 22961892 - 22961843
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattc 82  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22961892 aaaatagagggggtaaaattccgagttttaaaataaggggggtaaaattc 22961843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 32130467 - 32130398
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatagggggtaaaatt 110  Q
    |||||||||||||| |||||||||||||||| || |||||  ||| ||||||||||||||||||||||||    
T  32130467 gggggtaaaattccaagttttaaaataggggaggcaaaatctagaatcaatcaaaatagggggtaaaatt 32130398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 2940210 - 2940131
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaa--atagggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||| | ||||||||||||  | |||||||||||||    
T  2940210 aaaatagagggggtaaaattccgagttttaaaataagggaggcaaaatcccgattcaatcaaattagagggggtaaaatt 2940131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 2940628 - 2940707
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  2940628 aaaatagggggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 2940707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 33575421 - 33575477
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag 99  Q
    |||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||    
T  33575421 ggggtaaaattctgagttttaaaataggagggtaaaattccaattcaatcaaaatag 33575477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 40830872 - 40830773
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcattt 116  Q
    ||||| ||||||||||||||||||  ||||||||||| | | |||||||||||| ||  |||||  | ||||||||||||||||| |||||| |||||||    
T  40830872 aaaattcagaatcaataaaaatag--ggggtaaaatttcaaattttaaaataggaggc-aaaatctaaattcaatcaaaatagggagtaaaactgcattt 40830776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 1294220 - 1294140
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag---ggggtaaaattgcatttaag 119  Q
    |||||||||||| ||||||||||||||||||||| |||| | ||| || |||||||||   |||| |||||||||||||||    
T  1294220 gggggtaaaatttcgagttttaaaataggggggtgaaatcccgatacagtcaaaataggggggggcaaaattgcatttaag 1294140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 44426191 - 44426253
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||||    
T  44426191 gggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaataggggg 44426253  T

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Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 38815584 - 38815535
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  38815584 aaaatagggggggtaaaattccgagttttaaaatagagggggtaaaattc 38815535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 1858579 - 1858512
Alignment:
Q  45 ggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||  |||| ||||| || |||||||||||||  |||||||||||||    
T  1858579 ggtaaaattccgagttttaaaatataggggcaaaatccaaattcaatcaaaatagagggggtaaaatt 1858512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 19974839 - 19974760
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaatag--ggggtaaaatt 110  Q
    ||||||| ||||||||||||||||||||||||||||||  || ||||| |||| ||||| |||||||  |||||||||||    
T  19974839 aaaatagggggggtaaaattccgagttttaaaatagggaaggcaaaatccagaatcaataaaaataggaggggtaaaatt 19974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 39317712 - 39317633
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||| ||||| ||||||||| | |||||||||||| |||||||||||| |||| |||||||||||  |||||||||||||    
T  39317712 aaaacagaggaggtaaaattacaagttttaaaataaggggggtaaaatccagaatcaatcaaaatagagggggtaaaatt 39317633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 32130433 - 32130381
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg 70  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||    
T  32130433 caaaatctagaatcaatcaaaatag--ggggtaaaattccgagttttaaaatagg 32130381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 42158866 - 42158925
Alignment:
Q  41 agggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag 99  Q
    ||||||||||||| ||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  42158866 agggggtaaaatttcgagttttaaaataaagggggcaaaattccgattcaatcaaaatag 42158925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 42158509 - 42158447
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    |||| |||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||||    
T  42158509 ggggataaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaataggggg 42158447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 2236073 - 2236133
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||| |||||||||||||||||||||| ||||||||||||  |||||  |||||||||||||    
T  2236073 ggggataaaattccgagttttaaaata-gggggtaaaatttcgattctgtcaaaataggggg 2236133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 11823655 - 11823598
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggg 73  Q
    ||||||||| | ||||| ||||| |||||| ||||||||||||| |||||||||||||    
T  11823655 caaaatccaaattcaatcaaaattgaggggataaaattccgagtattaaaataggggg 11823598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 40830878 - 40830838
Alignment:
Q  70 gggggtaaaattcagattcaatcaaaatagggggtaaaatt 110  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  40830878 gggggtaaaattcagaatcaataaaaatagggggtaaaatt 40830838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 7759890 - 7759956
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaatag 99  Q
    |||||||||||||| |||||| |||||| |||||||||||| |||||||| | || | |||||||||    
T  7759890 aaaatagagggggtgaaattctgagtttaaaaataggggggataaaattccgttttagtcaaaatag 7759956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 11165567 - 11165510
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata 98  Q
    |||||| |||||||||||||||||||||| |||||||||| ||| || | ||||||||    
T  11165567 gggggtgaaattccgagttttaaaataggaggggtaaaatccagtttgagtcaaaata 11165510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 32525364 - 32525284
Alignment:
Q  34 aaaatagaggggg-taaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatag--ggggtaaaatt 110  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||| ||||  |||| |||||||  |||||||||||    
T  32525364 aaaatagagggggataaaattccaagttttaaaataggggaggcaaaatccagaaccaataaaaatagaaggggtaaaatt 32525284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 31076692 - 31076771
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| |||||||||||| | |||| ||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  31076692 aaaatagggggggtaaaatttcaagttctaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 31076771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 34788965 - 34788894
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||| |||| ||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  34788965 gggggtaaaattccaagttctaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 34788894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 36067604 - 36067675
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||| |||| ||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  36067604 gggggtaaaattccaagttctaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 36067675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 42942054 - 42942158
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggg-gtaaaattgcat 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42942054 caaaattcagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggagtaaaattgcat 42942153  T
Q  115 ttaag 119  Q
    |||||    
T  42942154 ttaag 42942158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 8295617 - 8295721
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  8295617 caaaatcctgattcaatcaaaatagagggggtaaaattccgagttttaaaataagggggtaaaattcagattcaatcaaaataggggggtaaaattgcat 8295716  T
Q  115 ttaag 119  Q
    |||||    
T  8295717 ttaag 8295721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 47378616 - 47378510
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg--taaaattgc 112  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||    
T  47378616 caaaatccagaatcaataaaaatagaggaggtaaaattccgagttttaaaatagaggggataaaattcagattcaatcaaaatagggggactaaaattgc 47378517  T
Q  113 atttaag 119  Q
    |||||||    
T  47378516 atttaag 47378510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 1963569 - 1963464
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgca 113  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1963569 caaaatccagaatcaataaaaatagggggggtaaaattttgagtttttaaataggggggtaaaattcagattcaatcaaaatagggggggtaaaattgca 1963470  T
Q  114 tttaag 119  Q
    ||||||    
T  1963469 tttaag 1963464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 37399417 - 37399519
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcattt 116  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| |||| ||    
T  37399417 aaaatccagaatcaatcaaaatagggggggtaaaattccgagttttaaaataggggggcaaaatccaaattcaatcaaaatagggggtaaaactgcactt 37399516  T
Q  117 aag 119  Q
    |||    
T  37399517 aag 37399519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 2094025 - 2093921
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    ||||||||||||||||||||||||||||||||||||||  ||  |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  2094025 caaaatccagaatcaataaaaatagagggggtaaaattttgaagtttaaaataaggggggtaaaattcagattcaatcaaaataggggggtaaaattgca 2093926  T
Q  114 tttaa 118  Q
    |||||    
T  2093925 tttaa 2093921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 28882414 - 28882320
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28882414 tcaatcaaaatagagggggtaaaattccgagttttaaaatagggagggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 28882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 8294533 - 8294430
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||||||||    
T  8294533 aaaatccataatcaataaaaatagagggg-taaaattccgagttttaaaatagggggggtaaaattcaaattcaatcaaaataggggggttaaattgcat 8294435  T
Q  115 ttaag 119  Q
    |||||    
T  8294434 ttaag 8294430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 31902578 - 31902664
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||||    
T  31902578 caaaatccagaaccaataaaaatagagggggtaaaattccaagttttaaaata-gagggtaaaattgagattcaatcaaaataggggg 31902664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 1964081 - 1964157
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  1964081 tcaatcaaaatagagggggtaaaattccaagttttaaaatagggggggtaaaattcagattcaatcaaaataggggg 1964157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 2094511 - 2094598
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||| || ||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  2094511 caaaatcccgattcaatcaaaatagaaggggtaaaattcagagttttaaaatagggaggtaaaattcagattcaatcaaaatgggggg 2094598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 31902142 - 31902039
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcat 114  Q
    ||||||| || ||||| |||||||||||||||||||||| | |||||||||| || ||||||||||| |||||||||||||||  |||||||||||||||    
T  31902142 aaaatcccgattcaatcaaaatagagggggtaaaattccaaattttaaaata-ggaggtaaaattcatattcaatcaaaatagaaggggtaaaattgcat 31902044  T
Q  115 ttaag 119  Q
    |||||    
T  31902043 ttaag 31902039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 42941539 - 42941445
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| |||||||||||||||||||||| | ||||||||| || | ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42941539 tcaatcaaaatagagggggtaaaattccaaattttaaaataagagaggtaaaattcagattcaatcaaaatatggggggtaaaattgcatttaag 42941445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 28883173 - 28883253
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||||    
T  28883173 gggggtaaaattctgagttttaaaatagggggggtgaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 28883253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 42941593 - 42941514
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||  |||||||||||||    
T  42941593 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaatagagggggtaaaatt 42941514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 1964027 - 1964106
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||  |||||||||||||    
T  1964027 aaaatagagggggtaaaattccgagtttcaaaataaggggggcaaaattctgattcaatcaaaatagagggggtaaaatt 1964106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 2094469 - 2094548
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag--ggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||  |||||||||||    
T  2094469 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagaaggggtaaaatt 2094548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 31902184 - 31902106
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||||||  |||||||||||||    
T  31902184 aaaatagagggggtaaaatttcgagatttaaaataagggggtaaaatcccgattcaatcaaaatagagggggtaaaatt 31902106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 33178919 - 33178841
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag-ggggtaaaattgcatttaag 119  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||| ||||||||| |||||    
T  33178919 ggggataaaattccgagttttaaaataggggggtaaaatttcgattcagtcaaaataggggggcaaaattgcacttaag 33178841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 47379111 - 47379169
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg 74  Q
    |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  47379111 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaatagggggg 47379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 42791893 - 42791791
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggg-gtaaaattcagattcaatcaaaatagggggtaaaattgcat 114  Q
    ||||||||||| ||||| ||||||   |||||||||||| |||||| |||||| | || |||||||||| |||||||||||||||||||||||| || ||    
T  42791893 caaaatccagattcaattaaaataa--ggggtaaaattctgagtttcaaaataagaggtgtaaaattcaaattcaatcaaaatagggggtaaaactgtat 42791796  T
Q  115 ttaag 119  Q
    |||||    
T  42791795 ttaag 42791791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 8295575 - 8295654
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  8295575 aaaatagagggggtaaaatttcgagttttaaaataaggggggcaaaatcctgattcaatcaaaatagagggggtaaaatt 8295654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 33179568 - 33179627
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggg 102  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  33179568 gggggtaatattccgagttttaaaatagggg-gtaaaattcagattcagtcaaaatagggg 33179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 47379069 - 47379148
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||||||  |||||||||||||    
T  47379069 aaaatagagggggtaaaattccgagttttaaaatatggagggcaaaatcccgattcaatcaaaatagagggggtaaaatt 47379148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 1963611 - 1963541
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||||    
T  1963611 aaaatagggggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaataggggg 1963541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 8294576 - 8294498
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatag-ggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| || | ||||| ||||||| |||||||||||    
T  8294576 aaaatagagggggtaaaattccgagttttaaaataggggaggaaaaatccataatcaataaaaatagaggggtaaaatt 8294498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 42793095 - 42793188
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcatttaag 119  Q
    ||||| ||| ||||||||||||||||| || |||||||||||| ||| |||||| || |||||||||||||||| ||||||||  |||||||||    
T  42793095 tcaatcaaattagagggggtaaaattctgaattttaaaataggagggataaaatccaaattcaatcaaaataggagggtaaaaccgcatttaag 42793188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 28882468 - 28882389
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||| |  |||||||||||||  |||||||||||||    
T  28882468 aaaatagagggggtaaaatttcgagttttaaaataaggggggcaaaatcccaattcaatcaaaatagagggggtaaaatt 28882389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 2094059 - 2093988
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  2094059 gggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 2093988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 38864934 - 38864874
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||| ||||||||||||||||||||||||||| | || | |||||||| ||||    
T  38864934 ggggtaaaattctgagttttaaaataggggggtaaaattccgtttgagtcaaaataagggg 38864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 42432686 - 42432765
Alignment:
Q  42 gggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata-gggggtaaaattgcatttaag 119  Q
    |||| ||||||||||||||||||||||| ||||||||||| | |||||| | |||||| |||||||||| |||| |||||    
T  42432686 ggggttaaaattccgagttttaaaatagagggggtaaaatcccgattcagttaaaataggggggtaaaactgcacttaag 42432765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 47378650 - 47378592
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatag 99  Q
    ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||||    
T  47378650 gggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaatag 47378592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 6252782 - 6252729
Alignment:
Q  45 ggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata 98  Q
    ||||||||||||| |||||||||||  || |||||||| |||||||||||||||    
T  6252782 ggtaaaattccgaattttaaaatagaaggataaaattccgattcaatcaaaata 6252729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 34966061 - 34966005
Alignment:
Q  44 gggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggg 101  Q
    |||||||||||||| |||||||||| || |||||||||| |||||| |||||||||||    
T  34966061 gggtaaaattccgaattttaaaata-ggaggtaaaattctgattcagtcaaaataggg 34966005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 686213 - 686158
Alignment:
Q  47 taaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||| |||||||||||  |||| | |||||||||||||    
T  686213 taaaattccgagttttaaaatag-ggggtaaaatttcgattgagtcaaaataggggg 686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 31902544 - 31902615
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||  |||| |||||  |||||||||||||    
T  31902544 gggggtaaaattccgagttttaaaataggggaggcaaaatccagaaccaataaaaatagagggggtaaaatt 31902615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 37399388 - 37399444
Alignment:
Q  48 aaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||| | || ||||| |||| |||||||||||||||||    
T  37399388 aaaattccgagttttaaaataggagagggaaaatccagaatcaatcaaaataggggg 37399444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 6487017 - 6486959
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggg 101  Q
    ||||| |||||||||||| |||||||||||||||||| || | || | |||||||||||    
T  6487017 ggggtgaaattccgagttataaaataggggggtaaaactccgtttgagtcaaaataggg 6486959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 38865854 - 38865931
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata-gggggtaaaattgcatttaag 119  Q
    ||||| ||||||| ||||||||||||| ||| | ||||| || ||||||||||| || ||||||||||||||| |||||    
T  38865854 ggggggaaaattctgagttttaaaata-gggtgcaaaatccaaattcaatcaaattaggggggtaaaattgcacttaag 38865931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 686209 - 686253
Alignment:
Q  59 ttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||||||||||  |||| | |||||||||||||    
T  686209 ttttaaaataggggggtaaaatttcgatttagtcaaaataggggg 686253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 19113009 - 19112953
Alignment:
Q  44 gggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg 100  Q
    |||| |||||||||||| ||||||||||||| ||||||| | || | ||||||||||    
T  19113009 gggtgaaattccgagttataaaataggggggcaaaattccgtttgagtcaaaatagg 19112953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 34267846 - 34267747
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag-ggggtaaaattgcatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34267846 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggggtaaaattgcatt 34267747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 51928364 - 51928468
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  51928364 caaaatccagattcaatcaaaatagagggggtaaaattccgagttttaaaataggagggtaaaattcagattcaatcaaaataggggggtaaaattgcat 51928463  T
Q  115 ttaag 119  Q
    |||||    
T  51928464 ttaag 51928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 45753328 - 45753433
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgca 113  Q
    |||||||| || ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  45753328 caaaatcccgattcaatcaaaatagaggggataaaattccgagttttaaaatagaggggtaaaattcagattcaatcaaaatagggggggtaaaattgca 45753427  T
Q  114 tttaag 119  Q
    ||||||    
T  45753428 tttaag 45753433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 34268334 - 34268427
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcatttaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34268334 tcaatcaaaatagagggggtaaaattccgagttttaaaatagggggggtgaaattcagattcaatcaaaataggagggtaaaattgcatttaag 34268427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 50772868 - 50772764
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcat 114  Q
    |||||| |||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||| |||||    
T  50772868 caaaattcagattctatcaaaatagagggggtaaaattccgagttttaaaataggggggcaaaattcaaattcaatcaaaataggagggtaaaactgcat 50772769  T
Q  115 ttaag 119  Q
    |||||    
T  50772768 ttaag 50772764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 45752868 - 45752780
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaat--agggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  45752868 aaaatagagggggtaaaattccgagttttaaaatagggggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaag 45752780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 38739327 - 38739233
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  38739327 tcaatcaaaatagaaggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatatgggaggtaaaattgcatttaag 38739233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 41551243 - 41551337
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||| ||||| ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  41551243 tcaatcaaaattgagggggtaaaattctgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 41551337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 38739381 - 38739302
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag--ggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||  |||||||||||    
T  38739381 aaaatagagggggtaaaattccgagttttaaaataaagggggcaaaattccgattcaatcaaaatagaaggggtaaaatt 38739302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 41550765 - 41550695
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaataggggg 103  Q
    |||||||  ||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||    
T  41550765 aaaataggaggggtaaaattccaaattttaaaatagggggggtaaaattcagattcaatcaaaataggggg 41550695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 34267889 - 34267810
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  34267889 aaaatagagggggtaaaattccgagttttaaaataggggaggaaaaatccagaatcaataaaaatagagggggtaaaatt 34267810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 34268280 - 34268359
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| |  |||||||||||||  |||||||||||||    
T  34268280 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccaattcaatcaaaatagagggggtaaaatt 34268359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 50772910 - 50772831
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||| ||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||  |||||||||||||    
T  50772910 aaaacagagggggtaaaattccgagttttaaaataagaggggcaaaattcagattctatcaaaatagagggggtaaaatt 50772831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 32554793 - 32554723
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatagggggtaaaattg 111  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||  |||||||||||| |||||||    
T  32554793 gggggtaaaattccgagttttaaaataggggtggtaaaatcccgattcagccaaaatagggggcaaaattg 32554723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 17603678 - 17603726
Alignment:
Q  70 gggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17603678 gggggtaaaattcagattcaatcaaaata-ggggtaaaattgcatttaag 17603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 35576804 - 35576735
Alignment:
Q  35 aaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||  |||||||| ||||    
T  35576804 aaattgagggggtaaaattccgagttttaaaatagagggggtaaaattccgattctgtcaaaatacgggg 35576735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 40919825 - 40919768
Alignment:
Q  63 aaaataggggggtaaaattcagattcaatcaaaataggg-ggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  40919825 aaaataggggggtaaaattcaaattcaatcaaaatagggaggtaaaagtgcatttaag 40919768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 38739867 - 38739918
Alignment:
Q  70 gggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38739867 gggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 38739918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 41551189 - 41551268
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||| ||||||||||||| |  |||| ||||||| ||||||||||||||  |||||||||||||    
T  41551189 aaaatagagggggtaaaatttcgagttttaaaataaatggggcaaaattccgattcaatcaaaattgagggggtaaaatt 41551268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 56251747 - 56251655
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaataggggg-gtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||| |||||||  |||||||||||  |||||||||||||||  | | |||||||| ||||||||||||||||||||| || ||||||||||    
T  56251747 tcaattaaaataggaggggtaaaattttgagttttaaaataggaagagcaaaattcaaattcaatcaaaatagggggtagaactgcatttaag 56251655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 45753286 - 45753352
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag 99  Q
    |||||||| ||||||||||||||||||||||||| | ||||| ||||| | ||||||||||||||||    
T  45753286 aaaatagatggggtaaaattccgagttttaaaataaagggggcaaaatcccgattcaatcaaaatag 45753352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 36218115 - 36218176
Alignment:
Q  43 ggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||| | |||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  36218115 ggggtaaaatttcaagttttaaaataggagggataaaattcagattcagtcaaaataggggg 36218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 45752897 - 45752848
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  45752897 aaaatagggggggtaaaattccgagttttaaaatagagggggtaaaattc 45752848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 50053307 - 50053370
Alignment:
Q  43 ggggtaaaattccgagttttaaaata---ggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||   |||||||||||| | |||||| |||||||||||||    
T  50053307 ggggtaaaattccgagttttaaaatagggggggggtaaaatcccgattcagtcaaaataggggg 50053370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 40834702 - 40834806
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat-agggggtaaaattgcat 114  Q
    |||||||| | ||||| |||||| ||||| ||||||||||| |||||||||| ||| |  ||||| || ||||||||||||| ||||||||||| | |||    
T  40834702 aaaatccatattcaatcaaaataaaggggataaaattccgaattttaaaatacgggagacaaaatccaaattcaatcaaaataagggggtaaaactacat 40834801  T
Q  115 ttaag 119  Q
    |||||    
T  40834802 ttaag 40834806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 40919878 - 40919815
Alignment:
Q  41 agggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||||||||||||||||||  || ||||| |||| ||||| |||||||||||    
T  40919878 agggggtaaaattccgagttttaaaatagggaaggcaaaatccagaatcaataaaaataggggg 40919815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 38739841 - 38739879
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattc 54  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  38739841 caaaatctagaatcaataaaaatagagggggtaaaattc 38739879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 50052687 - 50052625
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||| ||||||| |||||||||||||| | |||||| |||||||| |||||||||||||    
T  50052687 gggggtaatattccgaattttaaaataggggagataaaatgcagattcagtcaaaataggggg 50052625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 51928322 - 51928401
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||| | |||||||||||| |||||||||||| | || || ||||| ||||||||||||||||  |||||||||||||    
T  51928322 aaaataaaaggggtaaaattctgagttttaaaataaaggaggcaaaatccagattcaatcaaaatagagggggtaaaatt 51928401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 72
Target Start/End: Complemental strand, 40834257 - 40834226
Alignment:
Q  41 agggggtaaaattccgagttttaaaatagggg 72  Q
    ||||||||||||||||||||||||||||||||    
T  40834257 agggggtaaaattccgagttttaaaatagggg 40834226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 32555318 - 32555384
Alignment:
Q  35 aaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaatagg 100  Q
    |||| |||||||||| |||| || ||||||||| || ||| |||||| |||||||||||||||||||    
T  32555318 aaattgagggggtaatattctgaattttaaaatgggagggataaaatccagattcaatcaaaatagg 32555384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 40919843 - 40919806
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattc 54  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  40919843 caaaatccagaatcaataaaaatag-gggggtaaaattc 40919806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 4768081 - 4768160
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaattgcatttaag 119  Q
    |||| ||||||||||||||||||||||| |||  |||  |||| |||| |||||||  ||||| ||||| ||||||||||    
T  4768081 ggggttaaaattccgagttttaaaatagagggacaaatatcagtttcagtcaaaatagaggggataaaactgcatttaag 4768160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 8e-43; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 36181056 - 36180952
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag-ggggtaaaattgcat 114  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36181056 caaaatccataatcaataaaaatagggggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggggtaaaattgcat 36180957  T
Q  115 ttaag 119  Q
    |||||    
T  36180956 ttaag 36180952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 38781832 - 38781936
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatagggggtaaaattgcat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  38781832 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataaggggggtaaaattcagattcaatcaaaatagaaggtaaaattgcat 38781931  T
Q  115 ttaag 119  Q
    |||||    
T  38781932 ttaag 38781936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 38781342 - 38781236
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  38781342 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 38781243  T
Q  113 atttaag 119  Q
    |||||||    
T  38781242 atttaag 38781236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 764492 - 764391
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata--gggggtaaaattgca 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||    
T  764492 aaaatccagaatcaataaaaatagagggggtaaaattccgaattttaaaatagaggggataaaattcagattcaatcaaaatagggggggtaaaattgca 764393  T
Q  114 tt 115  Q
    ||    
T  764392 tt 764391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 37707439 - 37707334
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||| || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37707439 caaaatcccgattcaatcaaaataaagggggtaaaattccgagttttaaaatagggagggtaaaattcagattcaatcaaaataggggggtaaaattgca 37707340  T
Q  114 tttaag 119  Q
    ||||||    
T  37707339 tttaag 37707334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 28937063 - 28936957
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  28937063 caaaatcccgattcaatcaaaatagagggggtaaaattccgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 28936964  T
Q  113 atttaag 119  Q
    |||||||    
T  28936963 atttaag 28936957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 28967823 - 28967929
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  28967823 caaaatcccgattcaatcaaaatagagggggtaaaattccgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 28967922  T
Q  113 atttaag 119  Q
    |||||||    
T  28967923 atttaag 28967929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 764989 - 765093
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgca 113  Q
    |||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | || ||||||||||    
T  764989 caaaatcccgattcaatcaaaatagagggggtaaaattccgaattttaaaataggggggtaaaattcagattcaatcaaaataaggaggataaaattgca 765088  T
Q  114 tttaa 118  Q
    |||||    
T  765089 tttaa 765093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 22202368 - 22202452
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  22202368 aaaatagaggggataaaattccgagttttaaaatagggg-gtaaaattcagattcaatcaaagtagggggtaaaattgcatttaag 22202452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 28990534 - 28990427
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg--ggggtaaaattcagattcaatcaaaata--gggggtaaaattg 111  Q
    |||||||| || ||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||    
T  28990534 caaaatcccgattcaatcaaaatagagggggtaaaattccgaattttaaaataggggggggtaaaattcagattcaatcaaaatagggggggtaaaattg 28990435  T
Q  112 catttaag 119  Q
    ||||||||    
T  28990434 catttaag 28990427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 22201870 - 22201767
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggg-gtaaaattcagattcaatcaaaat--agggggtaaaattgca 113  Q
    ||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  22201870 aaaatcccgattcaatcaaaatagagggggtaaaattccgaattttaaaatagggggagtaaaattcagattcaatcaaaatagagggggtaaaattgca 22201771  T
Q  114 ttta 117  Q
    ||||    
T  22201770 ttta 22201767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 28937563 - 28937651
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat--agggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  28937563 aaaatagagggggtaaaattccgagttttaaaatagggggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaag 28937651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 28991030 - 28991118
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat--agggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  28991030 aaaatagagggggtaaaattccgagttttaaaatagggggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaag 28991118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 28967315 - 28967229
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaattgcatttaag 119  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  28967315 aaaatagagggggtaaaattccgagttttaaaatag-ggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaag 28967229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 9513246 - 9513143
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatt 115  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||||||||||| ||||  ||||| || |||||||||||||||||| | ||| ||||||    
T  9513246 caaaatccaaattcaatcaaaatagagggggtaaaattccgagttttaaaataaggggacaaaatccaaattcaatcaaaataggggatgaaactgcatt 9513147  T
Q  116 taag 119  Q
    ||||    
T  9513146 taag 9513143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 22201912 - 22201834
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||  |||||||||||||    
T  22201912 aaaatagagggggtaaaattccgagttttaaaataagggggtaaaatcccgattcaatcaaaatagagggggtaaaatt 22201834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 28967781 - 28967860
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  28967781 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 28967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 28990576 - 28990497
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  28990576 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 28990497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 14036757 - 14036668
Alignment:
Q  33 aaaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    |||| ||||| |||||||||||||||||||||||| || |||| ||||| | |||||||||||||||  |||||||||||||||||||||    
T  14036757 aaaattagagagggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaatagggggggtaaaattgcatttaag 14036668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 764947 - 765026
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  764947 aaaatagagggggtaaaattccgaattttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 765026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 17609338 - 17609410
Alignment:
Q  48 aaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg-taaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||| ||||| ||||||||||    
T  17609338 aaaattccgagttttaaaataggggggcaaaatccaaatttaatcaaaatagggggataaaagtgcatttaag 17609410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 28937105 - 28937026
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  28937105 aaaatagagggggtaaaattccaagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 28937026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 38781384 - 38781305
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||  |||||||||||||    
T  38781384 aaaatagcgggggtaaaattccgagttttaaaatatggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 38781305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 764534 - 764456
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||| |||| ||||| |||||  |||||||||||||    
T  764534 aaaatagagggggtaaaattccgagttttaaaataggagagaaaaatccagaatcaataaaaatagagggggtaaaatt 764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 37707879 - 37707955
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcatttaag 119  Q
    |||||||||||||||||||||||||||  || |||||||||||||||| |||||||||| ||||||||||  |||||||    
T  37707879 gggggtaaaattccgagttttaaaata--ggagtaaaattcagattcactcaaaataggagggtaaaattatatttaag 37707955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 14786250 - 14786319
Alignment:
Q  35 aaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||    
T  14786250 aaattgaggaggtaaaattccgagttttaaaatagggggggtaaaattccgattcagtcgaaataggggg 14786319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 32825495 - 32825560
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaa 108  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||   ||||||||||||| ||||    
T  32825495 ggggtaaaattccgagttttaaaataggagggtaaaattccgattatgtcaaaataggggggaaaa 32825560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 32825127 - 32825065
Alignment:
Q  42 gggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||  |||||||| ||||    
T  32825127 gggggtaaaattccgagttttaaaatagagggggtaaaattccgattctgtcaaaatacgggg 32825065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 9513701 - 9513814
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-------ggggggta---aaattcagattcaatcaaaatagggggta 105  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||||||||||||       |||||| |   |||| || |||||||||||||||||||||    
T  9513701 caaaatccagaatcaatcaaaataggtggggttaaattccgagttttaaaatataggggggggggggagcgaaatccaaattcaatcaaaatagggggta 9513800  T
Q  106 aaattgcatttaag 119  Q
    ||| |||| |||||    
T  9513801 aaactgcacttaag 9513814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 14782589 - 14782528
Alignment:
Q  43 ggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||| | |||||||||||||    
T  14782589 ggggtaaaatttcgagttttaaaatagggggggtaaaattccgatttagtcaaaataggggg 14782528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 28937534 - 28937583
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  28937534 aaaatagggggggtaaaattccgagttttaaaatagagggggtaaaattc 28937583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 28967344 - 28967295
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  28967344 aaaatagggggggtaaaattccgagttttaaaatagagggggtaaaattc 28967295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 28991001 - 28991050
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  28991001 aaaatagggggggtaaaattccgagttttaaaatagagggggtaaaattc 28991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 36181569 - 36181626
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg 74  Q
    ||||||| || ||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  36181569 aaaatcccgattcaatcaaaatagaggggttaaaattccgatttttaaaatagggggg 36181626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 9513287 - 9513209
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||| |||||||| |||||||||||| ||||||| ||||| || |||||||||||||  |||||||||||||    
T  9513287 aaaatagagggg-taaaattctgagttttaaaataaggggggcaaaatccaaattcaatcaaaatagagggggtaaaatt 9513209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 38781790 - 38781869
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| |||||||||||| |||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  38781790 aaaatagggggggtaaaatttcgagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 38781869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 36181091 - 36181028
Alignment:
Q  41 agggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||||||||||||||||||||| || ||||| || | ||||| |||||||||||    
T  36181091 agggggtaaaattccgagttttaaaataggggaggcaaaatccataatcaataaaaataggggg 36181028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 17608582 - 17608520
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaa 79  Q
    |||||||| | ||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||    
T  17608582 aaaatccatattcaatcaaaagagagggggtaaaattccaagttttaaaattgggggataaaa 17608520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 36181526 - 36181592
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaatag 99  Q
    ||||||||| |||||||||| |||| ||||||||| |||||| ||||| | ||||||||||||||||    
T  36181526 aaaatagagagggtaaaatttcgaggtttaaaataaggggggaaaaatcccgattcaatcaaaatag 36181592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 34233186 - 34233243
Alignment:
Q  44 gggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaatagg 100  Q
    |||||||| |||||||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  34233186 gggtaaaactccgagttttgaaataggagggataaaattcagattcagtcaaaatagg 34233243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 37707469 - 37707402
Alignment:
Q  46 gtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||| |||| || ||||| | ||||||||||||||  |||||||||||||    
T  37707469 gtaaaattccgagttttaaaataagggaggcaaaatcccgattcaatcaaaataaagggggtaaaatt 37707402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40248034 - 40248094
Alignment:
Q  43 ggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaatagggg 102  Q
    ||||||| ||||||| ||||||||| || ||| ||||||||||||||| ||||||||||||    
T  40248034 ggggtaatattccgaattttaaaattggagggataaaattcagattcagtcaaaatagggg 40248094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 9513667 - 9513726
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatagg 100  Q
    |||| |||||||||||||||||||||||||| |  ||||| |||| ||||||||||||||    
T  9513667 ggggataaaattccgagttttaaaataggggagacaaaatccagaatcaatcaaaatagg 9513726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 17608616 - 17608546
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaa--atagggggtaaaatt 110  Q
    ||||||||||||||||||||||||  ||||||  ||||| || |||||||||||  | |||||||||||||    
T  17608616 gggggtaaaattccgagttttaaataagggggaaaaaatccatattcaatcaaaagagagggggtaaaatt 17608546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 22202347 - 22202414
Alignment:
Q  42 gggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaatagggggtaaaatt 110  Q
    |||||||||||||||||||||||||||| |||| |||||||| || |   | ||||||||||||||||||    
T  22202347 gggggtaaaattccgagttttaaaatagaggggataaaattccgagt--tttaaaatagggggtaaaatt 22202414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 30601939 - 30602012
Alignment:
Q  45 ggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    |||||||||||||||||||||||| ||||||||||| ||| |  | ||||||||| ||| |||| || |||||||    
T  30601939 ggtaaaattccgagttttaaaata-gggggtaaaatccagttcgagtcaaaatagagggcaaaactgtatttaag 30602012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 35560388 - 35560331
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg 100  Q
    |||||||||||| ||||||||||||||| ||||||||||||  ||||  ||||||||||    
T  35560388 gggggtaaaatttcgagttttaaaatag-ggggtaaaattccaattctgtcaaaatagg 35560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 38853117 - 38853220
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata-gggggtaaaattgcat 114  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  38853117 caaaatccagaatcaataaaaatagggggggtaaaattccgagttttaaaata-gggggtaaaattcagattcaatcaaaataggggggtaaaattgcat 38853215  T
Q  115 ttaag 119  Q
    |||||    
T  38853216 ttaag 38853220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 33222119 - 33222013
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  33222119 caaaatccagaatcaataaaaataaagggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 33222020  T
Q  113 atttaag 119  Q
    |||||||    
T  33222019 atttaag 33222013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 38852611 - 38852518
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcatttaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  38852611 tcaatcaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaag 38852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 38929543 - 38929646
Alignment:
Q  18 aaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatt 115  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||    
T  38929543 aaatcccgattcaataaaaatagagggggtaaaattccgaattttaaaataaaggggtaaaattcagattcaatcaaaataaggggggtaaaattgcatt 38929642  T
Q  116 taag 119  Q
    ||||    
T  38929643 taag 38929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 38929123 - 38929017
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaat--agggggtaaaattgc 112  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||  ||||||| |||||||    
T  38929123 caaaatccataatcaataaaaatagagggggtaaaattctgagttttaaaatagggggggtaaaattcatattcaatcaaaatagagggggtgaaattgc 38929024  T
Q  113 atttaag 119  Q
    |||||||    
T  38929023 atttaag 38929017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 23615873 - 23615769
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcat 114  Q
    |||||||| ||||||| || |||| |||||||||||||| ||||||||||||||||||  |||| || |||||||||||||||  ||||||||||||||     
T  23615873 aaaatccaaaatcaatcaatatagggggggtaaaattccaagttttaaaataggggggcgaaatccaaattcaatcaaaatagggggggtaaaattgcac 23615774  T
Q  115 ttaag 119  Q
    |||||    
T  23615773 ttaag 23615769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 33222626 - 33222721
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata---gggggtaaaattgcatttaag 119  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||   |||||||||||||||||||||    
T  33222626 tcaatcaaaatcgagggggaaaaattccgagttttaaaataggaggggtaaaattcagatttaaacaaaataggggggggtaaaattgcatttaag 33222721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 34020279 - 34020384
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg-taaaattgca 113  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||| || || ||||| || ||||||||||||||||||| ||||| ||||    
T  34020279 caaaatccagattcaatcaaaatagaggaggtaaaatttcgagttttaaaatagaggaggcaaaatccaaattcaatcaaaatagggggataaaactgca 34020378  T
Q  114 tttaag 119  Q
    ||||||    
T  34020379 tttaag 34020384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 50681304 - 50681201
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcat 114  Q
    |||||||||| ||||| |||||||||||| ||| ||||||||||||||||||| |||||||||| || |||||||||||||||  ||| ||||| |||||    
T  50681304 aaaatccagattcaatcaaaatagaggggataatattccgagttttaaaatag-ggggtaaaatccaaattcaatcaaaataggagggataaaactgcat 50681206  T
Q  115 ttaag 119  Q
    |||||    
T  50681205 ttaag 50681201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 29252817 - 29252918
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatt 115  Q
    |||||| |||| ||||| ||||| || |||||||||||||||||||||||||||||||  ||||| || |||||||||| ||||||||||| | ||||||    
T  29252817 caaaattcagattcaatcaaaattgacggggtaaaattccgagttttaaaataggggg--aaaatccaaattcaatcaatatagggggtaatactgcatt 29252914  T
Q  116 taag 119  Q
    ||||    
T  29252915 taag 29252918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 13935280 - 13935174
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatag--ggggtaaaattgc 112  Q
    |||||||| || ||||| |||||||| ||||||||||||| | |||||||||||| | |||||||||||||||||| ||||||||  ||| |||||||||    
T  13935280 caaaatcctgattcaatcaaaatagaaggggtaaaattccaaattttaaaataggagtggtaaaattcagattcaaccaaaataggagggataaaattgc 13935181  T
Q  113 atttaag 119  Q
    |||||||    
T  13935180 atttaag 13935174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 29252556 - 29252454
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatt 115  Q
    ||||||||| ||||||| ||||| |||||||| |||||||||||||||||||| || || ||||| || |||||||||||||||| ||||||| |||| |    
T  29252556 caaaatccaaaatcaatcaaaattgagggggtcaaattccgagttttaaaata-ggaggcaaaatccaaattcaatcaaaataggaggtaaaactgcact 29252458  T
Q  116 taag 119  Q
    ||||    
T  29252457 taag 29252454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 34020237 - 34020303
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaa-taggggggtaaaattcagattcaatcaaaatag 99  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  34020237 aaaacagagggggtaaaattccgagttttaaaattaggggggcaaaatccagattcaatcaaaatag 34020303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 50681346 - 50681281
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag 99  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||    
T  50681346 aaaatatagggggtaaaattccgagttttaaataaggggggaaaaatccagattcaatcaaaatag 50681281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 33222572 - 33222636
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat 97  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  33222572 aaaatagagggggtaaatttccgagttttaaaataaggggggcaaaattccgattcaatcaaaat 33222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 38852665 - 38852586
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||| ||||||||||||| | ||||| ||||||| ||||||||||||||  |||||||||||||    
T  38852665 aaaatagagggggtaaaatttcgagttttaaaataaagggggcaaaattccgattcaatcaaaatagagggggtaaaatt 38852586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 38092733 - 38092796
Alignment:
Q  56 gagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||| ||||||||| || | |||||||||||||||||| ||||||||||    
T  38092733 gagttttaaaataggggggcaaaattcagtttgagtcaaaatagggggtaaaactgcatttaag 38092796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 13935791 - 13935885
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaat-agggggtaaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||  | |||||||||||| |  | |||||||| | ||||||||||| |||||||||||    
T  13935791 caaaatccagaatcaataaaaatagaggggataaaattctaaattttaaaataggagaagcaaaattcaaaatcaatcaaaataagggggtaaaa 13935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 29252784 - 29252839
Alignment:
Q  43 ggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat 97  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  29252784 ggggtaaaattccgagttttaaaataaagggggcaaaattcagattcaatcaaaat 29252839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 38853075 - 38853145
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||| ||||||||||||||||||||||||||||||  || ||||| |||| ||||| |||||||||||    
T  38853075 aaaatagggggggtaaaattccgagttttaaaatagggaaggcaaaatccagaatcaataaaaataggggg 38853145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 465326 - 465243
Alignment:
Q  35 aaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||| ||||| |||||||  |||||||||||||||| ||||||||||| ||| | | ||||||||| | |||||||||||||||    
T  465326 aaatataggggttaaaattttgagttttaaaatagggcggtaaaattcaaattaagttaaaatagggag-aaaattgcatttaag 465243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 33222153 - 33222082
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  33222153 gggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaataaagggggtaaaatt 33222082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 38929499 - 38929578
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||| ||||||||||||||||||||||| |||||||  |||| | |||||||| |||||  |||||||||||||    
T  38929499 aaaatagaggcggtaaaattccgagttttaaaataaggggggcgaaatcccgattcaataaaaatagagggggtaaaatt 38929578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 34019835 - 34019756
Alignment:
Q  45 ggtaaaattccgagttttaaaataggggg---gtaaaattcagattcaatcaaaatag--ggggtaaaattgcatttaag 119  Q
    |||||||||||||||||||||||||||||   | ||||| || |||||||||||||||  ||||||||| |||| |||||    
T  34019835 ggtaaaattccgagttttaaaatagggggggagcaaaatccaaattcaatcaaaatagtaggggtaaaactgcacttaag 34019756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 13935315 - 13935243
Alignment:
Q  41 agggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag--ggggtaaaatt 110  Q
    ||||||||||||||||||||||||||| || |||  ||||| | ||||||||||||||||  |||||||||||    
T  13935315 agggggtaaaattccgagttttaaaataagagggacaaaatcctgattcaatcaaaatagaaggggtaaaatt 13935243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 38929165 - 38929086
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| |||||||||||||||| |||||||||||||| || ||||| || | ||||| |||||  |||||||||||||    
T  38929165 aaaatagggggggtaaaattccgaattttaaaataggggaggcaaaatccataatcaataaaaatagagggggtaaaatt 38929086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 13935757 - 13935815
Alignment:
Q  42 gggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaatag 99  Q
    |||||||||||||||||||||||||||| || || ||||| |||| ||||| |||||||    
T  13935757 gggggtaaaattccgagttttaaaatagaggaggcaaaatccagaatcaataaaaatag 13935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 6810605 - 6810501
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagg-gggtaaaattgcat 114  Q
    |||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6810605 caaaatcccgattcaattaaaatagagggagtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggagggtaaaattgcat 6810506  T
Q  115 ttaag 119  Q
    |||||    
T  6810505 ttaag 6810501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 6505232 - 6505319
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  6505232 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggcaaaattcaaaatcaatcaaaataggggg 6505319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 6811099 - 6811204
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgca 113  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||| ||||||||||    
T  6811099 caaaatccagaatcaataaaaatagaaagggtaaaattccgagttttaaaataagagggtaaaattcagattcaatcaaaataggagggataaaattgca 6811198  T
Q  114 tttaag 119  Q
    ||||||    
T  6811199 tttaag 6811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 6504773 - 6504668
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||| || ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  6504773 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaatagggaggataaaattcagattcaatcaaaataggggggtaaaattgca 6504674  T
Q  114 tttaag 119  Q
    ||||||    
T  6504673 tttaag 6504668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 5564300 - 5564195
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaat--agggggtaaaattgc 112  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||    
T  5564300 caaaatccagaatcaataaaaatag-gggggtaaaattctgagttttaaaatagggggggtaaaattcaaattcaatcaaaatagagggggtaaaattgc 5564202  T
Q  113 atttaag 119  Q
    |||||||    
T  5564201 atttaag 5564195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 26616994 - 26616910
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  26616994 aaaatagagggggtaaaattccgagttttaacatagggggc-aaaattcagattcaatcaaaatagggggtaaaattgcatttaag 26616910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 26617483 - 26617571
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||| || ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  26617483 caaaatcccgattcaatcaaaatagagggggtaaaattccgaattttaaaatagagggggtaaaattcagattcaatcaaaataggggg 26617571  T

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Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 52214008 - 52213916
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||    
T  52214008 tcaatcaaaatagagggggtaaaattccaagttttaaaataggggaggtaaaattcaaagtcaatcaaaataggaggtaaaattgcatttaag 52213916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 37596779 - 37596675
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaattgca 113  Q
    |||||||| || ||||| |||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||  ||||||||||||||||    
T  37596779 caaaatcccgattcaatcaaaatagagggggtaaaattccaagttttaaaatag-ggggtgaaattcaaattcaatcaaaatagagggggtaaaattgca 37596681  T
Q  114 tttaag 119  Q
    ||||||    
T  37596680 tttaag 37596675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 52214526 - 52214583
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52214526 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg 52214583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 7710226 - 7710140
Alignment:
Q  33 aaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||  || |||||||||||||||| ||||||| ||||||||||    
T  7710226 aaaaatagaaggggtaaaattccgagttttaaaatagggggacaaaacccaaattcaatcaaaataggaggtaaaactgcatttaag 7710140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 5564757 - 5564836
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||  |||||||||||||    
T  5564757 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaatagagggggtaaaatt 5564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 37596997 - 37597065
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaataggg 101  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  37596997 aaaatagagggggtaaaattccaagttttaaaatagggggggtaaaattcagattcaattaaaataggg 37597065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 37596938 - 37597016
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||  |||||||||||||    
T  37596938 aaaatagagggggtaaaattccgagttttaaaataagggggcaaaattccgattcagtcaaaatagagggggtaaaatt 37597016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 7708696 - 7708798
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcattt 116  Q
    |||||||| | ||||| |||||||  |||||||||||||||||||||||||||||||  ||||  || |||||||||||| ||| ||||||| |||||||    
T  7708696 aaaatccaaattcaatcaaaataggaggggtaaaattccgagttttaaaatagggggacaaaacccaaattcaatcaaaacaggaggtaaaactgcattt 7708795  T
Q  117 aag 119  Q
    |||    
T  7708796 aag 7708798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 26617441 - 26617520
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  26617441 aaaatagagggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 26617520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 30456127 - 30456057
Alignment:
Q  49 aaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||||| |||| |||||    
T  30456127 aaattccgagttttaaaatagaggggcaaaatccaaattcaatcaaaatagggggtaaaactgcacttaag 30456057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 51247156 - 51247242
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||| |||||||||| |||||||||||  ||||||| ||||||||||||||| ||||| ||||| || |||||||||||||||||||    
T  51247156 caaaattcagaatcaatcaaaatagaggg--taaaatttcgagttttaaaatagagggggcaaaatccaaattcaatcaaaataggggg 51247242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 37596821 - 37596742
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||| | ||||||||||||||  |||||||||||||    
T  37596821 aaaatagagggggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 37596742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 52214483 - 52214562
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  52214483 aaaatagagggggtaaaattccgagttttaaaataggggaggaaaaatccagaatcaataaaaatagagggggtaaaatt 52214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 5564342 - 5564272
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||||    
T  5564342 aaaatagggggggtaaaattccgagttttaaaataggggaggcaaaatccagaatcaataaaaataggggg 5564272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 5564811 - 5564857
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatagggggg 74  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  5564811 tcaatcaaaatagagggggtaaaattccgagttttaaaatagggggg 5564857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 14922488 - 14922550
Alignment:
Q  42 gggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||||    
T  14922488 gggggtaaaattccgagttttaaaatagggggggtaaaattccgattctgtcaaaataggggg 14922550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 32473805 - 32473867
Alignment:
Q  42 gggggtaaaattccgagttttaaaata-ggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  32473805 gggggtaaaattccgagttttaaaatagggggggtaaaatttcgattcagtcaaaataggggg 32473867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 40845411 - 40845471
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||    
T  40845411 gggggtaaaattccgagttttaaaata-gggggtaaaattccgatttaatcaaaatacgggg 40845471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 51247122 - 51247191
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaatagggggtaaaatt 110  Q
    |||||||||||||| ||||||||||||| || || |||||||||| ||||||||||||| ||||||||||    
T  51247122 gggggtaaaattccaagttttaaaatagaggaggcaaaattcagaatcaatcaaaatagagggtaaaatt 51247191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 6504808 - 6504736
Alignment:
Q  41 agggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||||| | ||||| ||||| | ||||||||||||||  |||||||||||||    
T  6504808 agggggtaaaattccgagttttaaaataacgggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 6504736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 6505190 - 6505269
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| ||||||||| ||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  6505190 aaaatagggggggtaaagttccgagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 6505269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 6810640 - 6810581
Alignment:
Q  41 agggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag 99  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | |||||||| |||||||    
T  6810640 agggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaattaaaatag 6810581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 14922125 - 14922063
Alignment:
Q  42 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||||| ||||||||||| || |||||||||||| |||||| |||||||| ||||    
T  14922125 gggggtaaaattccaagttttaaaataagaggggtaaaattccgattcagtcaaaatacgggg 14922063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 26617023 - 26616974
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  26617023 aaaataggaggggtaaaattccgagttttaaaatagagggggtaaaattc 26616974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 30456625 - 30456688
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata 98  Q
    |||||||||||| ||||||| | |||||||||| | ||||| |||||||||||||||| ||||||    
T  30456625 aaaatagagggg-taaaatttcaagttttaaaacaagggggcaaaattcagattcaattaaaata 30456688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 35166321 - 35166380
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||| |||||| ||||||    
T  35166321 ggggtaaaattccgagttttaaaata-tggggtaaaatcccgattcagtcaaaacaggggg 35166380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 52214061 - 52213983
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||| ||||||||| ||||||||||| ||||||| ||||| |  |||||||||||||  |||||||||||||    
T  52214061 aaaatagagggg-taaaattccaagttttaaaataaggggggcaaaatcccaattcaatcaaaatagagggggtaaaatt 52213983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 45285460 - 45285398
Alignment:
Q  42 gggggtaaaattccgagttttaaaatag--gggggtaaaattcagattcaatcaaaatagggg 102  Q
    |||||||||||||| |||||||||||||  |||||||||||||  ||||  ||||||||||||    
T  45285460 gggggtaaaattccaagttttaaaataggagggggtaaaattccaattctgtcaaaatagggg 45285398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 6811057 - 6811094
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggg 71  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  6811057 aaaatagggggggtaaaattctgagttttaaaataggg 6811094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 17335738 - 17335843
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagggggg-taaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |    
T  17335738 caaaatccagaatcaataaaaatagaggaggtaaaattctgagttttaaaataggggggataaaattcagattcaatcaaaataggggggtaaaattgta 17335837  T
Q  114 tttaag 119  Q
    ||||||    
T  17335838 tttaag 17335843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 29361707 - 29361606
Alignment:
Q  20 atccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata-gggggtaaaattgcattta 117  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  29361707 atccagaatcaataaaaataaagagggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaataggggggtaaaattgcattta 29361608  T
Q  118 ag 119  Q
    ||    
T  29361607 ag 29361606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 17335239 - 17335134
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  17335239 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaattaaaataggggggtaaaattgca 17335140  T
Q  114 tttaag 119  Q
    ||||||    
T  17335139 tttaag 17335134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 17192412 - 17192518
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatag--ggggtaaaattgc 112  Q
    |||||||| || ||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||  |||||||||||||    
T  17192412 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttctaaaataggagggataaaattcagattcaatcaaaataggaggggtaaaattgc 17192511  T
Q  113 atttaag 119  Q
    |||||||    
T  17192512 atttaag 17192518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 15272979 - 15272874
Alignment:
Q  18 aaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatagggg---gtaaaattgca 113  Q
    |||||| || ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||   |||||||||||    
T  15272979 aaatcccgattcaatcaaaatagagagggtaaaattccgagttttaaaatagggggggtaaaattcagattcaattaaaataggggggtgtaaaattgca 15272880  T
Q  114 tttaag 119  Q
    ||||||    
T  15272879 tttaag 15272874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 31066381 - 31066484
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata--gggggtaaaattgc 112  Q
    |||||||| || ||||| |||||||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  31066381 caaaatcccgattcaatcaaaatag---gggtaaaattccgagttttaaaatagtgggggtaaaattcagattcaatcaaaatagggggggtaaaattgc 31066477  T
Q  113 atttaag 119  Q
    |||||||    
T  31066478 atttaag 31066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 32754882 - 32754983
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaat-agggggtaaaattgcat 114  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||| ||||||||||| |||||    
T  32754882 aaaatccagattcaatcaaaatagagggggtaaaattccgagttttaaaatagagggggaaaaatccaaattcaatcaaaataagggggtaaaactgcat 32754981  T
Q  115 tt 116  Q
    ||    
T  32754982 tt 32754983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 31065902 - 31065799
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat-agggggtaaaattgcat 114  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||| |||| ||||||||| ||||||||||||| ||||||| ||||| |||    
T  31065902 caaaatccagaatcaataaaaatagagggggtaaaattctaaattttaaaata-ggggataaaattcaaattcaatcaaaataagggggtgaaattacat 31065804  T
Q  115 ttaag 119  Q
    |||||    
T  31065803 ttaag 31065799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 17191936 - 17191850
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaata-gggggtaaaattgcatttaa 118  Q
    ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  17191936 aaaatagagggggtaaaattccgagttttaaaatagaaagggcaaaattcagattcaatcaaaataggggggtaaaattgcatttaa 17191850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 24814401 - 24814464
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaa 79  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  24814401 caaaatccagaatcaataaaaatagagggagtaaaattccgagttttaaaatagggggggaaaa 24814464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 6181129 - 6181209
Alignment:
Q  42 gggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaag 119  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  6181129 gggggtaaaattccgagttttaaaatagaaggggtaaaattcagattcaatcaaaataagggggataaaattgcatttaag 6181209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 29362191 - 29362255
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaatt 81  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29362191 aaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaataggggggtaaaatt 29362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 35051851 - 35051792
Alignment:
Q  44 gggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  35051851 gggtaaaattccaagttttaaaataggggggtaaaattccgattcagtcaaaataggggg 35051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 6180669 - 6180603
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaata-ggggggtaaaatt 81  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6180669 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaatatggggggtaaaatt 6180603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 15273741 - 15273824
Alignment:
Q  43 ggggtaaaattccgagttttaaaatagggg------ggtaaaattcagattcaatcaaaata--gggggtaaaattgcatttaa 118  Q
    |||||||||||| |||||||||||||||||      ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  15273741 ggggtaaaattctgagttttaaaataggggggggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaa 15273824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 31066339 - 31066408
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatagggg 102  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||| | |||||||||||||||||||    
T  31066339 aaaatagagggggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaatagggg 31066408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 6180711 - 6180632
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||| | ||||||||||||||  |||||||||||||    
T  6180711 aaaatagagggggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 6180632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 17335281 - 17335202
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  17335281 aaaatagagggggtaaaattctgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 17335202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 28924843 - 28924899
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag 99  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  28924843 ggggtaaaactccgagttttgaaataggggagtaaaattcagattcaatcaaaatag 28924899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 29362148 - 29362227
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||| | ||||||||||||||  |||||||||||||    
T  29362148 aaaatagagggggtaaaattccgaattttaaaataacgggggtaaaatcccgattcaatcaaaatagagggggtaaaatt 29362227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 17192371 - 17192449
Alignment:
Q  35 aaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||| | ||||||||||||||  |||||||||||||    
T  17192371 aaatagagggggtaaaattctgagttttaaaataaggggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 17192449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 24813896 - 24813839
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggg 73  Q
    |||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||    
T  24813896 caaaatcccgattcaattaaaatagagggggtaaaattccgaattttaaaataggggg 24813839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 32754840 - 32754918
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||| ||| |||||||||||||||||||||||||  || || ||||| ||||||||||||||||  |||||||||||||    
T  32754840 aaaacagatggggtaaaattccgagttttaaaattaggagggaaaatccagattcaatcaaaatagagggggtaaaatt 32754918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 15273327 - 15273291
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagg 70  Q
    |||||||||||||||||||||||||||||||||||||    
T  15273327 aaaatagagggggtaaaattccgagttttaaaatagg 15273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 29361753 - 29361716
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggg 71  Q
    |||||||||||||||||||||| |||||||||||||||    
T  29361753 aaaatagagggggtaaaattccaagttttaaaataggg 29361716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 24813938 - 24813859
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||| |||||||||||||||||| | | ||| ||||| | |||||||| |||||  |||||||||||||    
T  24813938 aaaatagagggggtagaattccgagttttaaaataaagagggcaaaatcccgattcaattaaaatagagggggtaaaatt 24813859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 17191965 - 17191916
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattc 82  Q
    |||||||  |||||||||||| |||||||||||||| |||||||||||||    
T  17191965 aaaataggaggggtaaaattctgagttttaaaatagagggggtaaaattc 17191916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 31065941 - 31065865
Alignment:
Q  37 atagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||| |||||||||||||||| |||||||||||||| |  ||||| |||| ||||| |||||  |||||||||||||    
T  31065941 atagggggggtaaaattccgaattttaaaataggggagacaaaatccagaatcaataaaaatagagggggtaaaatt 31065865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 76; Significance: 5e-35; HSPs: 4)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 6910 - 6997
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  6910 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggcaaaattcaaaatcaatcaaaataggggg 6997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 6456 - 6351
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaata-gggggtaaaattgca 113  Q
    |||||||| || ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  6456 caaaatcccgattcaatcaaaatagagggggtaaaattccgagttttaaaatagggaggataaaattcagattcaatcaaaataggggggtaaaattgca 6357  T
Q  114 tttaag 119  Q
    ||||||    
T  6356 tttaag 6351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 6868 - 6947
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaatagggg-ggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||| ||||||||| ||||||||||||||||||||| || ||||| |||| ||||| |||||  |||||||||||||    
T  6868 aaaatagggggggtaaagttccgagttttaaaataggggaggcaaaatccagaatcaataaaaatagagggggtaaaatt 6947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 6489 - 6419
Alignment:
Q  43 ggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    ||||||||||||||||||||||||| | ||||| ||||| | ||||||||||||||  |||||||||||||    
T  6489 ggggtaaaattccgagttttaaaataacgggggcaaaatcccgattcaatcaaaatagagggggtaaaatt 6419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 404 - 480
Alignment:
Q  28 tcaataaaaatagagggggtaaaattccgagttttaaaatag-gggggtaaaattcagattcaatcaaaataggggg 103  Q
    ||||| |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  404 tcaatcaaaatagagggggtaaaattccgaatttaaaaatagagggggtaaaattcagattcaatcaaaataggggg 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 360 - 429
Alignment:
Q  43 ggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaat--agggggtaaaatt 110  Q
    |||||||||||||||||||||||||| ||||||||||| |  |||||||||||||  |||||||||||||    
T  360 ggggtaaaattccgagttttaaaataagggggtaaaatcccaattcaatcaaaatagagggggtaaaatt 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 349 - 282
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggg 102  Q
    ||||||||||||||||||||||||||||||||||| || || ||||| || | ||||||||||||||||    
T  349 aaaatagagggggtaaaattccgagttttaaaata-ggaggcaaaatccaaaatcaatcaaaatagggg 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 22373 - 22269
Alignment:
Q  17 aaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatag--ggggtaaaattgcat 114  Q
    |||||||||| | ||| ||||||  ||| |||||||||||||||||||||| |||||| |||||||| ||| |||||||||||  |||||||||||| ||    
T  22373 aaaatccagattaaatcaaaataatgggagtaaaattccgagttttaaaattggggggcaaaattcaaattgaatcaaaataggaggggtaaaattgtat 22274  T
Q  115 ttaag 119  Q
    |||||    
T  22273 ttaag 22269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 22415 - 22351
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata 98  Q
    ||||||| | |||||||||||||||||||||||||  |||||||||| |||||| ||||||||||    
T  22415 aaaatagggtgggtaaaattccgagttttaaaataatggggtaaaatccagattaaatcaaaata 22351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 75342 - 75237
Alignment:
Q  16 caaaatccagaatcaataaaaatagagggggtaaaattccgagttttaaaatagg-ggggtaaaattcagattcaatcaaaatag--ggggtaaaattgc 112  Q
    |||||||| || ||||| ||||||||||  |||||||||| | |||||||||||| ||| ||||||||| |||||||||||||||  | |||||||||||    
T  75342 caaaatcccgattcaatcaaaatagaggaagtaaaattccaaattttaaaataggagggataaaattcaaattcaatcaaaataggagaggtaaaattgc 75243  T
Q  113 atttaa 118  Q
    | ||||    
T  75242 aattaa 75237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 75384 - 75318
Alignment:
Q  34 aaaatagagggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatag 99  Q
    ||||||||| |||||||||||||||||||||||| ||| ||| ||||| | ||||||||||||||||    
T  75384 aaaatagagagggtaaaattccgagttttaaaataaggagggcaaaatcccgattcaatcaaaatag 75318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 17495 - 17435
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaatagggg 102  Q
    |||||||| ||||||| ||| ||||| |||||||||||| |||||||||||||||||||||    
T  17495 gggggtaatattccgaatttaaaaattggggggtaaaatccagattcaatcaaaatagggg 17435  T

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Target: scaffold0119; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 18053 - 18133
Alignment:
Q  42 gggggtaaaattccgagttttaaaataggggggtaaaattcagattcaatcaaaata---gggggtaaaattgcatttaag 119  Q
    |||||||||||| ||||||||||||||||||||| |||| | ||| || ||||||||   ||||| |||||||||||||||    
T  18053 gggggtaaaatttcgagttttaaaataggggggtgaaatcccgatacagtcaaaataggggggggcaaaattgcatttaag 18133  T

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