View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2728_low_6 (Length: 471)
Name: NF2728_low_6
Description: NF2728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2728_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 1 - 464
Target Start/End: Complemental strand, 32224230 - 32223760
Alignment:
| Q |
1 |
atctatctactttctctttctctctctttggttctgagtgtttgtgcagataatatgaacgacgctcggcaatcacgaaatgggttttgggtttggtgtt |
100 |
Q |
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| T |
32224230 |
atctatctactttctctttctctctctttggttctgagtgtttgtgcagataatatgaacgacgctcggcaatcacgaaatgggttttgggtttggtgtt |
32224131 |
T |
|
| Q |
101 |
aataaaacagatcaatggtgtaactagttgagtggaagaagtgaaagttgagtagtggatggatgattctgttttttgttctatttttagcaacaacaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32224130 |
aataaaacagatcaatggtgtaactagttgagtggaagaagtgaaagttgagtagtggatggatgattctgttttttgttctatttttagcaacaacaag |
32224031 |
T |
|
| Q |
201 |
gatttttgtgaaaacagtgaaacatttttatgacatttgtgcaatctgtattcaatcctctccctttacttttaccatcatgatannnnnnncatgacaa |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32224030 |
gatttttgtgaaaacagtgaaacatttttatgacatttgtgcaatctgtattcaatcctctccctttacttttaccatcatgatatttttttcatgacaa |
32223931 |
T |
|
| Q |
301 |
gttcttagctgtaaatgggttatgggtaatgggtaagttaagttattagtctctcaactatag-------tacatacatacatatacttgtgaatatgaa |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32223930 |
gttcttagctgtaaatgggttatgggtaatgggtaagttaagttattagtctctcaactatagtagtacatacatacatacatatacttgtgaatatgaa |
32223831 |
T |
|
| Q |
394 |
ccaaatgttatgaccggattcattggttgttttaattttgttttggctttttctttgaataatgatgatgt |
464 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32223830 |
ccaaatgttatgaccggattcattggttgttttaattttgttttggctttttctttgaataatgataatgt |
32223760 |
T |
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