View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2729_high_46 (Length: 378)
Name: NF2729_high_46
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2729_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 357
Target Start/End: Original strand, 31533397 - 31533751
Alignment:
| Q |
1 |
atggccgaccattgactgctcttgtaataatcagcaagaaccgatcaaagaagaatcttcttagtatatatggtatggtaattgggaatgccataaaatt |
100 |
Q |
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| T |
31533397 |
atggccgaccattgactgctcttgtaataatcagcaagaaccgatcaaagaagaatcttcttagtatatatggtatggtaattgggaatgccataaaatt |
31533496 |
T |
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| Q |
101 |
tcctacgtctaaacctgtttgtttgatttatttaaattccaaatagttcttaaaataatcgtaagcatgaaaagtattgtacattaatcatgcaaataat |
200 |
Q |
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| T |
31533497 |
tcctacgtctaaacctgtttgtttgatttatttaaattccaaatagttcttaaaataatcgtaagca--aaaagtattgtacattaatcatgcaaataat |
31533594 |
T |
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| Q |
201 |
tcagctgtgacagatgcttaatgccaaaatttggtagaggatagttgcttgctattnnnnnnnnttaacatgtgtttttcaaacaaaacaaaaattaaca |
300 |
Q |
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| T |
31533595 |
tcagctgtgatagatgcttaatgccaaaatttcgtagaggatagttgcttgctattaaaaaaaattaacatgtgtttttcaaacaaaacaaaaattaaca |
31533694 |
T |
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| Q |
301 |
tgtacatctcatcaaattatacaaagatgtttaaaaagaatcaaattatacaaagat |
357 |
Q |
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| T |
31533695 |
tgtacatctcatcaaattatacaaagatgtttaaaaagaatcaaattatacaaagat |
31533751 |
T |
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