View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2729_high_6 (Length: 752)
Name: NF2729_high_6
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2729_high_6 |
 | |
|
| [»] scaffold0300 (1 HSPs) |
| | |
|
| [»] scaffold0432 (1 HSPs) |
| | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 12410408 - 12410125
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12410408 |
agatgaataagtgttttgcctcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
12410309 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12410308 |
aggtaatctatcacgtaacaagcgccaagcgaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
12410209 |
T |
|
| Q |
201 |
ttggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
284 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12410208 |
ctggtgaatgtcaacagatgattataagcacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
12410125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 12422468 - 12422185
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12422468 |
agatgaataagtgttttgcctcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
12422369 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12422368 |
aggtaatctatcacgtaacaagcgccaagcgaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
12422269 |
T |
|
| Q |
201 |
ttggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
284 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12422268 |
ctggtgaatgtcaacagatgattataagcacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
12422185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 37647586 - 37647303
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37647586 |
agatgaataagtgttttgcatcttcgatcatgccgcatcgccccacgcagaaatgaacattcgaatgtaaaatgtgtcttttgattaaattgtccgttgt |
37647487 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
200 |
Q |
| |
|
| ||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
37647486 |
aggtaatctatcatgtaacaagcgctaagcgaagagactgattttcagaggcacttcctttttccaaatttcattcatgtgagtagccgacaagttgtta |
37647387 |
T |
|
| Q |
201 |
ttggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
284 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37647386 |
ctggtgaatgtcaacaaatgattataagcacttgtaactttataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
37647303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 5 - 284
Target Start/End: Complemental strand, 27271265 - 27270986
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
27271265 |
gaataagtgttttgcatcttctatcatgccgcatccacccacgcataactgaacattcagatgtaaaatgtgtcttttgattaaattgtctgttgttggt |
27271166 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||||| ||||||||| | ||| |||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||||| ||| |
|
|
| T |
27271165 |
aatctatcatgtaacaagctctaagtgaagagactgatttttagaggcacttccttgttccaaattttggtcatgtgattaactaccaagttgttactgg |
27271066 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
284 |
Q |
| |
|
|||||||||| |||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27271065 |
tgaatgtcaatagatgattataagcacttgtgactgtataacggttggaggcatgcaagtgccaaatccacatgtcaaga |
27270986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 23480484 - 23480415
Alignment:
| Q |
212 |
caacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||||| || ||||||||||||||||||||| || |||| ||| | ||| |||||||||| ||| |||||| |
|
|
| T |
23480484 |
caacaaataattataaacacttgtaacattgtatctgtaggaagaatgtaagtgccaaagccatctgtca |
23480415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 260; Significance: 1e-144; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 43498918 - 43498635
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43498918 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcaaaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
43498819 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
200 |
Q |
| |
|
| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43498818 |
aggtaatctatcacgtaataagcgccaagcgaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
43498719 |
T |
|
| Q |
201 |
ttggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
284 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43498718 |
ctggtgaatgtcaacagatgattataagcacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaaga |
43498635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 49 - 281
Target Start/End: Original strand, 36652220 - 36652452
Alignment:
| Q |
49 |
agaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaa |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
36652220 |
agaaatgaacattcggatgtaaaatgtgtcttttgattaaattttccgttgtagttaatctatcacgtaacaagcgctaagcgaagagactgattttcag |
36652319 |
T |
|
| Q |
149 |
aggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgattataaacacttgtaacattataactg |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
36652320 |
aggcacttccttgttccaaatttcagtcatctgagtaaccaccaagttgttactggtgaatgtcaacatatgattataagcacttgtaactttataactg |
36652419 |
T |
|
| Q |
249 |
ttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
36652420 |
ttggaggcatgcaagtgccaaatccacctgtca |
36652452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 39060204 - 39060479
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
39060204 |
gaataagtgttttgcatct-ctatcatgccggatccagccacgcataaatgcacattcggatgtaaaatgtgtcttttgattaaattgtccgttgttggt |
39060302 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||| || ||||||||||||||||| ||||||| ||| |||||| ||| |
|
|
| T |
39060303 |
aatctatcacgtaacaagcggcaagcgaagaggctgattttcagaggcacttccttatttcaaatttcagtcatgtgtgtaaccgccaaattgttactgg |
39060402 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||||||||| |||||||||||| |||||| | ||||||| ||| |||||||||||| ||||||||||||||||| |
|
|
| T |
39060403 |
cgaatgtcaatagatgattataagcacttgcgatgttataacagtttgaggcatgcaagcgccaaatccacctgtca |
39060479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 37871142 - 37871418
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||||||||||||| | || |||| ||||||| || ||| |||||||||||||||||||||||||||||| |||||| ||||| || |
|
|
| T |
37871142 |
gaataagtgttttgcatcttctatcgtaccacatccatccacgcataactgagcattcggatgtaaaatgtgtcttttgattagattgtctgttgttggt |
37871241 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||| || |
|
|
| T |
37871242 |
aatctatcatgtaacaagcgccaagcgaagaggctgattttcaggggcacttccttgttctaaatttcagtaatgtgagtaaccgccaagttgttactgt |
37871341 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||||||||| ||| |||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
37871342 |
ttgatgtcaacatatggttataagcacttgtgacattataactgctggaggcatgtaagtgccaaatccacctgtca |
37871418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 9896988 - 9897269
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9896988 |
gaataagtgttttgcatcttctatcatgccgcatccaaccacacataaatgtgcattcagatgtaaaatgtgtcttttgattaaattgtccgttgttggt |
9897087 |
T |
|
| Q |
105 |
-----aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtt |
199 |
Q |
| |
|
||||||||||||| |||||| |||| ||||| |||||||| | ||||||||||||||| ||||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
9897088 |
gattaaatctatcacgtagcaagcgtcaagtgaagaggctgatttttagaggcacttccttgtttcaaatttcaatcatgtgtgtaaccgccaagttgtt |
9897187 |
T |
|
| Q |
200 |
attggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9897188 |
accggtgaatgtcaacagatgattataagcacttgtgatgttataactgttggagacatgcaagtgccaaatccacctgtca |
9897269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 23108268 - 23108544
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| |||||||||| |||| | ||||||| |||||| || ||| || || ||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
23108268 |
gaataagtgctttgcatcttttatcgtaccgcatccattcacgcataactgagcactcagatgtaaaatgtgtcttttgattaaattgtctgttgttggt |
23108367 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| |
|
|
| T |
23108368 |
aatctatcacgtaacaagcgccaagcgaagagactgattttcaggggcacttccttgttccaaatttcagtaatgtgagtaaccgccaagttgttactgg |
23108467 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||||||||| ||| |||||| ||||||| |||| ||||||| |||||| ||| ||| ||||||||||||||||| |
|
|
| T |
23108468 |
ttgatgtcaacatatggttataagcacttgtgacatcataactgctggaggaatgtaagagccaaatccacctgtca |
23108544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 5 - 278
Target Start/End: Complemental strand, 48640341 - 48640068
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||| |||||||| || ||| |||| ||| |||||||||| ||||| |||| |||||| ||||| || |
|
|
| T |
48640341 |
gaataagtgttttgcatcctccatcataccgcatccacccacgcataactgagcatttggaagtaaaatgtgccttttaattagattgtctgttgttggt |
48640242 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || |||| ||||||||||||||||| ||||||| || |||||| ||||||| ||||| | | ||||||| | ||||||||||| ||| |
|
|
| T |
48640241 |
aatctatcccgcaacagacgccaagcaaagagactaattttcaggggaacttccatgttccagatttctgacgtgtgagttgctgacaagttgttgctgg |
48640142 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctg |
278 |
Q |
| |
|
| ||| |||||||| |||||| ||||||| || |||||| || |||| ||||| |||||||||||||||||| |
|
|
| T |
48640141 |
ttggtgttaacagatggttataagcacttgtgacgttataattgctggaagcatgtaagtgccaaatccacctg |
48640068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 47590948 - 47591224
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||||||||| || |||||| |||||| |||||||| || ||| |||| ||| |||||||||||||||| |||| ||||| |||||| || |
|
|
| T |
47590948 |
gaataagtgttttgcatcctccatcatgtcgcatccacccacgcataactgagcatttggaagtaaaatgtgtcttttaattagattgttcgttgttggt |
47591047 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || |||| |||||||||||||||| ||||||| ||||||||||||||| | ||||| | ||||||| ||||||||||| || |
|
|
| T |
47591048 |
aatctatcccgcaacagaagccaagcaaagagactaattttcaggggcacttccttgttcaagatttctaacgtgtgagttgttgacaagttgttgctga |
47591147 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||| |||||||| |||||| ||||||| || |||||| ||||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
47591148 |
ttggtgttaacagatggttataagcacttgtgacgttataattgttggaagcatgtaagtgtcaaatccacctgtca |
47591224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 271
Target Start/End: Original strand, 30598722 - 30598988
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||| ||||||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| | |||||| | ||||||| | ||||| || |
|
|
| T |
30598722 |
gaataagtgttatgcatcttctaacatgccacatctacccacacaaacttgagcatttggttgtataatttatcttttaactaaattgccagttgttggt |
30598821 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||| ||| | || ||||| ||||||||||||| ||| |||||||||||||| || ||||||||||| |||||| | | | |||||||||||| | |
|
|
| T |
30598822 |
aatctattacgaagcagacgccatgcaaagagactgacttttaaaggcacttccttatttcaaatttcagttatgtgatcagctgccaagttgttatttg |
30598921 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaat |
271 |
Q |
| |
|
| ||| ||||| || |||||| ||||||| || ||||| ||||||| ||||| || |||||||| |
|
|
| T |
30598922 |
ttgatgacaacaagtggttataagcacttgtgacgttatatttgttggatgcatgtaaatgccaaat |
30598988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7743193 - 7743124
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaa |
70 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
7743193 |
agatgaataagtgttttacatcttctatcataccgcatcgccccacgcagaaatgaatattcggatgtaa |
7743124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 240; Significance: 1e-132; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 401 - 730
Target Start/End: Original strand, 33759512 - 33759852
Alignment:
| Q |
401 |
tttgttggtttttaacaccactaattatttgttgataaatcacgaatacttttgaaattgttatggtcaagtcaattttacttaagataataattatcat |
500 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
33759512 |
tttgttggtttttagcaccactaattatttgttgataaataacgaatacttttgaaattgttatggtcaagttcattttacttaagataataattatcat |
33759611 |
T |
|
| Q |
501 |
tttgcttgtgttacaaagaactcaaccttaaacataacctattcctccagaatgcgtaccaccagaaccattccttcaaattaaagtagccaca--nnnn |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33759612 |
tttgcttgtgttacaaagaactcaaccttaaacataacctattcctccagaatgcgtaccaccagaaccattccttcaaattaaagtagccacatttttt |
33759711 |
T |
|
| Q |
599 |
nnngagtagaaatcaaattccgtatttcaaatttgcaacactgacacatactgtgcacaaaccactaatgctagaccttagtggtgatgaaag--acaca |
696 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
33759712 |
tatgagtagaaatcaaattccgtatttcaaatttacaacactcacatatactgtgcacaaaccactaatgctagaccttggtggtgatgaaagacacaca |
33759811 |
T |
|
| Q |
697 |
tttg-------aagaagaattaaatatgatgttactaataa |
730 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
33759812 |
tttgaatatgaaagaagaattaaatatgatgttactaataa |
33759852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 10436924 - 10437200
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||| ||||||||||| || | ||| ||||||| |||||||| || ||| |||| ||| |||||||||||||||| |||| |||||||||||| || |
|
|
| T |
10436924 |
gaataaatgttttgcatcctccagcataccgcatccacccacgcataactgagcatttggaagtaaaatgtgtcttttaattagattgtccgttgttggt |
10437023 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || |||| |||||||||||||||||| ||||||| || |||||||| ||||||||||| | | ||||||| | ||||||||||| || |
|
|
| T |
10437024 |
aatctatcccgcaacaggcgccaagcaaagagactaattttcaggggaacttccttattccaaatttctgacgtgtgagttgctgacaagttgttgctga |
10437123 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||| |||||||| |||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||| ||||| |
|
|
| T |
10437124 |
ttggtgttaacagatggttataagcacttgtgacattataattgttggaagcatgtaagtgccaaatccacttgtca |
10437200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 33759158 - 33759259
Alignment:
| Q |
383 |
agctgctcattttcatcctttgttggtttttaacaccactaattatttgttgataaatcacgaatacttttgaaattgttatggtcaagtcaattttact |
482 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
33759158 |
agctgctcattttcatcctttgttggtttttaacatcactaattatttgttgataaatcacgaatacttttgaaattgttatggtcaagttcattttact |
33759257 |
T |
|
| Q |
483 |
ta |
484 |
Q |
| |
|
|| |
|
|
| T |
33759258 |
ta |
33759259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 6 - 281
Target Start/End: Complemental strand, 15029687 - 15029412
Alignment:
| Q |
6 |
aataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagta |
105 |
Q |
| |
|
|||||||| || ||||| || ||||| ||||||| |||||||| || ||| |||| || |||||| | ||||||| |||| |||||||||||| ||| |
|
|
| T |
15029687 |
aataagtgcttagcatcctccatcataccgcatccacccacgcaaaactgagcattttgaagtaaaaggggtcttttaattagattgtccgttgttggta |
15029588 |
T |
|
| Q |
106 |
atctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggt |
205 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| | | |||| || | || | |
|
|
| T |
15029587 |
atctatcacgcaacagacgccaagcaaagagactaattttcacgggcacttccttgttccaaatttctgtcgagtgagctgctgccaagatgctgctgtt |
15029488 |
T |
|
| Q |
206 |
gaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
|||||| ||||| |||||| ||||||| || |||||| ||||||| ||||| || ||||||||||||||||| |
|
|
| T |
15029487 |
tggtgtcaatagatggttataagcacttgtgacgttataagtgttggaagcatgtgagggccaaatccacctgtca |
15029412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 603 - 696
Target Start/End: Original strand, 33759339 - 33759433
Alignment:
| Q |
603 |
agtagaaatcaaattccgtatttcaaatttg-caacactgacacatactgtgcacaaaccactaatgctagaccttagtggtgatgaaagacaca |
696 |
Q |
| |
|
||||| |||||||||||||||||| || ||| | |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
33759339 |
agtaggaatcaaattccgtatttctaaattgacgacacccacacatactgcgcacaaaccactaatgctagaccttagtggtgatgaacgacaca |
33759433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 281
Target Start/End: Original strand, 53459401 - 53459676
Alignment:
| Q |
6 |
aataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagta |
105 |
Q |
| |
|
|||||||| | ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | |||||||| |||| ||| |
|
|
| T |
53459401 |
aataagtgctctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtatgttgctggta |
53459500 |
T |
|
| Q |
106 |
atctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggt |
205 |
Q |
| |
|
||||| ||| | || ||||||||||||||||||| ||| |||||||||||||| || ||||||||||| |||||| | | | |||||||||||| || |
|
|
| T |
53459501 |
atctactacgaagcagacgccaagcaaagagactgacttttaaaggcacttccttatttcaaatttcagttatgtgatcagctgccaagttgttatttgt |
53459600 |
T |
|
| Q |
206 |
gaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| ||||| || |||||| ||||||| || ||||| |||| || ||||| || || ||||||||||||||| |
|
|
| T |
53459601 |
tgatgacaacaagtggttataagcacttgtgacgttatatttgttagatgcatggaaatggcaaatccacctgtca |
53459676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 33759463 - 33759508
Alignment:
| Q |
338 |
tgatgtttcgttttcttggattatcagaatccagttccacatgcta |
383 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
33759463 |
tgatgtttcgttttcttttattattagaatccagttccacatgcta |
33759508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300 (Bit Score: 225; Significance: 1e-123; HSPs: 1)
Name: scaffold0300
Description:
Target: scaffold0300; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 9194 - 8918
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9194 |
gaataaatgttttgcatcttctatcatgccgcatccccccacgcaaaaatgaacattcagatgtaaaatgtgtcttttgattaaattgtccgttgtaggt |
9095 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
9094 |
aatctatcacgtaacaagcgccaagcgaagagactgattttcagaggcacttccttgttccaaatttcagtcatgtgagtaaccgccaagttgttactgg |
8995 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8994 |
tgattgtcaacagatgattataagcacttgtaattttataactgttggaggcatgcaagtgccaaatccacctgtca |
8918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 8444744 - 8445020
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||| || |
|
|
| T |
8444744 |
gaataagtgttttgcatcttctatcatgccccatccccccatgcataaatgaacattcagatgtaaaatgcgtcttttgattaaattgtctgttgtaggt |
8444843 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | | |
|
|
| T |
8444844 |
aatctatcacgtaacaagcaccaagcgaagagactggtttttagaagcacttccttgttccaaatttcagtcatgtgagtaaccgccaagttattactag |
8444943 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8444944 |
tgaatgtcaacagatgattataagcacttgtaactttataactgttggaggcatgcaagtgccaaatccacctgtca |
8445020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 13090270 - 13090546
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| | |||||||| || ||| |||||||||||||||||||||||||||||| ||||| |||||| || |
|
|
| T |
13090270 |
gaataagtgttttgcatcttctatcgtaccgcaaccacccacgcataactgagcattcggatgtaaaatgtgtcttttgattagattgttcgttgttggt |
13090369 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| || |
|
|
| T |
13090370 |
aatctatcacgtaacaagcgccaagcgaagaggctgattttcaagggcacttccttgttccaaatttcagtaatgtgagtaaccgccaagttgttactgt |
13090469 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||||||||| ||| |||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
13090470 |
ttgatgtcaacatatggttataagcacttgagacattataactgctggaggcatgtaagtgccaaatccacctgtca |
13090546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 4034784 - 4035043
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||| |||||||||||| | ||| ||| |||||||| || ||| ||||| |||||||||||||||||||||||| |||||||||||| || |
|
|
| T |
4034784 |
gaataagtgtttcgcatcttctatcgtaccgtatccacccacgcataactgagcattcagatgtaaaatgtgtcttttgattagattgtccgttgttggt |
4034883 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| | |
|
|
| T |
4034884 |
aatctatcacgtaacaagcgccaagcgaagagactgattttcaggggcacttccttgttccaaatttcagtaatgtgagtaaccgccaagttgttactat |
4034983 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagt |
264 |
Q |
| |
|
| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||| |||| |
|
|
| T |
4034984 |
ttgatgtcaacatatggttataagcacttgagacattataactgttggaggcatgtaagt |
4035043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 24503675 - 24503523
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24503675 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattatccgttgt |
24503576 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggca |
153 |
Q |
| |
|
| ||||||||||| |||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
24503575 |
aggtaatctatcatgtaacaagcgccaagcgaagagactgatttttaaaggca |
24503523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 45539932 - 45539713
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||| || |
|
|
| T |
45539932 |
gaataagtgtttttcatcttctatcatgccgcatgcacccacgcataaatgagcattcggatgtaaaatgtctcttttgatgaaattgtccgttgttggt |
45539833 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||| |||| ||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||| || ||| |
|
|
| T |
45539832 |
aatctatcacgtaacaagcgtcaagtgaagaggctgactttcagaggcacttccttgttccaaatttcaatcatgtgagtaaccaccaagttactactgg |
45539733 |
T |
|
| Q |
205 |
tgaatgtcaacagatgatta |
224 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
45539732 |
tgaatgtcaacaaatgatta |
45539713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 9932589 - 9932865
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||| ||||||||||| || | ||| ||||||| |||||||| || ||| ||| ||| |||||||||||||||| |||| |||||||||||| || |
|
|
| T |
9932589 |
gaataaatgttttgcatcctccagcataccgcatccacccacgcataactgagcatatggaagtaaaatgtgtcttttaattagattgtccgttgttggt |
9932688 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || |||| |||||||||||||||||| ||||||| || |||||||||||||||||||| | | ||||||| | ||||||||||| || |
|
|
| T |
9932689 |
aatctatcccgcaacaggcgccaagcaaagagactaattttcaggggaacttccttgttccaaatttctgacgtgtgagttgctgacaagttgttgctga |
9932788 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| |||||||| |||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
9932789 |
atggtgttaacagatggttataagcacttgtgacattataattgttggaagcatgtaagtgccaaatccacctgtca |
9932865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 15728865 - 15728805
Alignment:
| Q |
221 |
attataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||||||| ||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||| |
|
|
| T |
15728865 |
attataagcacttgtgacattataattgttggaagcatgcaaatgccaaatccacttgtca |
15728805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 166; Significance: 2e-88; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 1031841 - 1031565
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaa-tgtgtcttttgattaaattgtccgttgtaag |
103 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||| || || |||| |||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
1031841 |
gaataagtgttttgcatcttctatcatgttgcatccgcccacgcataactgcgcatttggatgtaaaaatgtgtcttttgattaaattgtccgttgatgg |
1031742 |
T |
|
| Q |
104 |
taatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattg |
203 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||| || |
|
|
| T |
1031741 |
taatctattacgtaacaagcgccaagcgaagaggctgattttcagaggcacttccttgttccaaatttcagt-atgtgtgtaaccgccaagttgttactg |
1031643 |
T |
|
| Q |
204 |
gtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1031642 |
gtgaatgtcaacagacgattataagcacttgtgactttataactgtgggaggcatgcaagtgccaaatccacctgtca |
1031565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 5 - 278
Target Start/End: Original strand, 17194373 - 17194646
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| |||||||||||||| | ||||| || ||||| || || | | |||||||||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
17194373 |
gaataagtgatttgcatcttctattgtaccgcaacgacccacacataactaagcattcggatgtaaaatgtgtattttgattagattgtccgttgttggt |
17194472 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| | |||| |||||||| ||||||||| ||| |
|
|
| T |
17194473 |
aatctatcacgtaacaagcgccacgcgaagagactgattttcaggggcacttccttgttccaaatttcaatgatgttagtaaccgccaagttgttgctgg |
17194572 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctg |
278 |
Q |
| |
|
| ||||||||| ||| |||||| |||||| ||||||||| ||||| ||||||| ||||||||||| |||||| |
|
|
| T |
17194573 |
ttgatgtcaacatatggttataagcacttgagacattataattgttgaaggcatgtaagtgccaaatgcacctg |
17194646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 40858513 - 40858791
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||| ||| || || |||| ||| |||||||||||||||| |||| |||||||||||| || |
|
|
| T |
40858513 |
gaataagtgttttgcatcctccatcatgccgcatccacccaggcataatcgagcatttggaagtaaaatgtgtcttttaattagattgtccgttgttggt |
40858612 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || || | ||||||||||||||||| ||||||| ||||||||||||||||| ||||| | | ||||||| | ||||||||||| || |
|
|
| T |
40858613 |
aatctatcccgcaatagacgccaagcaaagagactaattttcaggggcacttccttgttccagatttctgacgtgtgagttgctgacaagttgttgctga |
40858712 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacat--tataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||| |||||||| ||| || ||||||| |||| |||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
40858713 |
ttggtgttaacagatggttacaagcacttgtgacattatatagttgttggaagcatgtaagtgccaaatccacctgtca |
40858791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 32575080 - 32574804
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| | ||| ||||||| |||||| |||| ||||| || | ||| ||| || |||| ||| |||||||| | ||||||||| ||| | || |
|
|
| T |
32575080 |
gaataagtgctctgcgtcttctaacatgccacatctgcccacacaaacttgagaatttggttgtataatttgtcttttaactaaattgtctgttattggt |
32574981 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||| ||| | || |||||| |||||||||||| ||| |||||||||||||| |||||||||||||| |||||| || | | |||||||||||| | |
|
|
| T |
32574980 |
aatctattacgaagcagacgccaaacaaagagactgacttttaaaggcacttccttattccaaatttcagttatgtgattagctgccaagttgttatttg |
32574881 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||| ||||| ||||||||| ||||||| |||||||| ||||||| ||||| || |||||||||||||||||| |
|
|
| T |
32574880 |
ttgatgacaacaagtgattataagcacttgtgacattatatttgttggatgcatgtaaatgccaaatccacctgtca |
32574804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 5555370 - 5555094
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||| ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | |||||||| ||||| || |
|
|
| T |
5555370 |
gaataagtgttctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtttgttgttggt |
5555271 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||| ||| | || ||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||| | | | |||||||||||| | |
|
|
| T |
5555270 |
aatctattacgaagcagacgccaagcaaagagactgacttttaaaggcacttccttattccaaatttcagttatgtgatcagctgccaagttgttatttg |
5555171 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||| ||||| | ||||||| ||||||| || ||||| ||||||| | ||| || |||||||||||||||||| |
|
|
| T |
5555170 |
ttgatgacaacaagtaattataagcacttgtgacgttatatttgttggatgaatgtaaatgccaaatccacctgtca |
5555094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 8 - 281
Target Start/End: Complemental strand, 19323828 - 19323555
Alignment:
| Q |
8 |
taagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagtaat |
107 |
Q |
| |
|
|||||| | ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | ||||||||| ||||| ||||| |
|
|
| T |
19323828 |
taagtgctctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtctgttgttggtaat |
19323729 |
T |
|
| Q |
108 |
ctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggtga |
207 |
Q |
| |
|
|||| | | | || ||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||| | | | |||||||||||| || |
|
|
| T |
19323728 |
ctattaagaagcagacgccaagcaaagagactgacttttaaaggcacttccttattccaaatttcagttatgtgatcagctgccaagttgttatttgttg |
19323629 |
T |
|
| Q |
208 |
atgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| ||||| | ||||||| ||||||| |||||||| ||||||| | ||| || |||||||||||||||||| |
|
|
| T |
19323628 |
atgacaacaagtaattataagcacttgtgacattatatttgttggatgaatgtaaatgccaaatccacctgtca |
19323555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 66 - 281
Target Start/End: Original strand, 29126407 - 29126622
Alignment:
| Q |
66 |
tgtaaaatgtgtcttttgattaaattgtccgttgtaagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttcc |
165 |
Q |
| |
|
|||| ||| |||||||| | ||||||||| ||||| ||||||||| ||| | || ||||||||||||||||||| ||| |||||||||||||| || | |
|
|
| T |
29126407 |
tgtataatttgtcttttaactaaattgtctgttgttggtaatctattacgaagcagacgccaagcaaagagactgacttttaaaggcacttccttatttc |
29126506 |
T |
|
| Q |
166 |
aaatttcagtcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtg |
265 |
Q |
| |
|
|||||||||| |||||| | | | |||||||||||| || ||| ||||| | ||||||| ||||||| || ||||| ||||||| | ||| || || |
|
|
| T |
29126507 |
aaatttcagttatgtgatcagctgtcaagttgttatttgttgatgacaacaagtaattataagcacttgtgacgttatatttgttggatgaatgtaaatg |
29126606 |
T |
|
| Q |
266 |
ccaaatccacctgtca |
281 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
29126607 |
ccaaatccacctgtca |
29126622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 75 - 281
Target Start/End: Complemental strand, 15669232 - 15669026
Alignment:
| Q |
75 |
tgtcttttgattaaattgtccgttgtaagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcag |
174 |
Q |
| |
|
|||||||| | ||||||||| ||||| |||||||| ||| | || ||||||||||||||||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
15669232 |
tgtcttttaactaaattgtctgttgttggtaatctactacgaagcagacgccaagcaaagagactgacttttaaaggcacttccttattccaaatttcat |
15669133 |
T |
|
| Q |
175 |
tcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatcca |
274 |
Q |
| |
|
| |||||| | | |||||||||||| || ||| ||||| || |||||| ||||||| || ||||| ||||||| ||||| || ||||||||||| |
|
|
| T |
15669132 |
ttatgtgatcagcttccaagttgttatttgttgatgacaacaagtggttataagcacttgtgacgttatatttgttggatgcatgtaaatgccaaatcca |
15669033 |
T |
|
| Q |
275 |
cctgtca |
281 |
Q |
| |
|
||||||| |
|
|
| T |
15669032 |
cctgtca |
15669026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 38141850 - 38141673
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||| ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | ||||||||| ||||| || |
|
|
| T |
38141850 |
gaataagtgttctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtctgttgttggt |
38141751 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtga |
182 |
Q |
| |
|
||||||| | | | || |||||||||| |||||||| ||| |||||||||||||| |||||||||||||| |||||| |
|
|
| T |
38141750 |
aatctattaagaagcagacgccaagcaaggagactgacttttaaaggcacttccttattccaaatttcagttatgtga |
38141673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 281
Target Start/End: Original strand, 18299939 - 18300214
Alignment:
| Q |
6 |
aataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagta |
105 |
Q |
| |
|
||||||||||||| ||||| | |||||| |||| ||||| || || ||| |||| || |||||||| | |||||| | || |||||| ||||| ||| |
|
|
| T |
18299939 |
aataagtgttttgtgtcttccagcatgccacatccgcccacacaaaactgagcatttggttgtaaaatttatcttttaactagattgtctgttgttggta |
18300038 |
T |
|
| Q |
106 |
atctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggt |
205 |
Q |
| |
|
|||||| || |||| ||||||||||| ||||| | ||| |||||||||||||| ||| |||||||| | |||||| | | | |||||||||||| || |
|
|
| T |
18300039 |
atctattacacaacagacgccaagcaaaaagactaacttttaaaggcacttccttattcaaaatttcaattatgtgatcagctgccaagttgttatttgt |
18300138 |
T |
|
| Q |
206 |
gaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| ||||| || |||||| |||||| || ||||| ||||||| |||| || |||||||||||||||||| |
|
|
| T |
18300139 |
tgatgacaacaagtggttataagcacttgcgacgttatatttgttggatacatgtaaatgccaaatccacctgtca |
18300214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 29626524 - 29626248
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| | ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | ||||||||| | || || |
|
|
| T |
29626524 |
gaataagtgctctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtctatagttggt |
29626425 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||| | | | || ||||||| || |||||||| ||| |||||||||||||| |||||||||||||| || ||| | | | |||||||||||| | |
|
|
| T |
29626424 |
aatctattaagaagcagacgccaagtaaggagactgacttttaaaggcacttccttattccaaatttcagttatctgatcagctgccaagttgttatttg |
29626325 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| | ||||||| | ||||||| ||||||| || ||||| | ||||| | ||| || |||||||||||||||||| |
|
|
| T |
29626324 |
ttgaagtcaacaagtaattataagcacttgtgacgttatatttcttggatgaatgtaaatgccaaatccacctgtca |
29626248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 25289239 - 25289364
Alignment:
| Q |
150 |
ggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgattataaacacttgtaacattataactgt |
249 |
Q |
| |
|
|||||||||| |||||| ||||| | | ||||||| | ||||||||||| |||| ||| |||||||| |||||| || |||| || |||||| ||| |
|
|
| T |
25289239 |
ggcacttcctagttccagatttctgacgtgtgagttgctgacaagttgttgctggttggtgtaaacagatggttataagcatttgtgacgttataagtgt |
25289338 |
T |
|
| Q |
250 |
tggaggcatgcaagtgccaaatccac |
275 |
Q |
| |
|
|||| ||||| ||||||||||||||| |
|
|
| T |
25289339 |
tggaagcatgtaagtgccaaatccac |
25289364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 161; Significance: 2e-85; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 12912743 - 12913019
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||| ||||||||| | ||||||| |||||||| || ||| |||||||||||||||||||||||||||||| |||||||||||| || |
|
|
| T |
12912743 |
gaataagtgttttgcgtcttctatcgtaccgcatccacccacgcataactgagcattcggatgtaaaatgtgtcttttgattagattgtccgttgttggt |
12912842 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| || |
|
|
| T |
12912843 |
aatctatcacgtaacaagcgccaagcgaagaagctgattttcaggggcacttccttgttccaaatttcagtaatgtgagtaaccgtcaagttgttactgt |
12912942 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||||||||| ||| |||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
12912943 |
ttgatgtcaacatatggttataagcacttgagacattataactgctggaggcatgtaagtgccaaatccacctgtca |
12913019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 6028940 - 6028758
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| ||||||| |||||||| || ||| |||| ||| |||||||||||||||| |||| ||| |||||||| |
|
|
| T |
6028940 |
agatgaataagtgtttagcatcctccatcataccgcatccacccacgcaaaattgagcatttggaagtaaaatgtgtcttttaattagattatccgttgt |
6028841 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgag |
183 |
Q |
| |
|
| ||||||||||| |||| || |||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||| |
|
|
| T |
6028840 |
tggcaatctatcacgcaacagacgtcaagcaaagagactaattttcaagggcacttccttgttccaaatttctgtcaagtgag |
6028758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 7093533 - 7093257
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| | ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | ||||||||| ||||| || |
|
|
| T |
7093533 |
gaataagtgctctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtctgttgttggt |
7093434 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||| | | | || |||||||||| |||||||| ||| |||||||||||||| |||||||||||||| |||||| | | | |||||||||||| | |
|
|
| T |
7093433 |
aatctattaagaagcagacgccaagcaaggagactgacttttaaaggcacttccttattccaaatttcagttatgtgatcagctgccaagttgttattcg |
7093334 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| | | ||||| | ||||||| ||||||| || ||||| ||||||| | ||| || |||||||||||||||||| |
|
|
| T |
7093333 |
ttgaagacaacaagtaattataagcacttgtgacgttatatttgttggatgaatgtaaatgccaaatccacctgtca |
7093257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 18973110 - 18973203
Alignment:
| Q |
7 |
ataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||| || ||| ||||| ||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
18973110 |
ataagtgttttgcatcttctatcataccgcatccacccacgcataactgagcattcagatgtaaaacatgtcttttgattagattgtccgttgt |
18973203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 24393521 - 24393432
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtc |
94 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||| || | | |||| |||||||| |||||||||||||| |||||| |
|
|
| T |
24393521 |
gaataagtgttttgcatcttctatcataccgcatccacccacgcataactaagtattcatatgtaaaaggtgtcttttgattagattgtc |
24393432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 282
Target Start/End: Original strand, 30975429 - 30975588
Alignment:
| Q |
123 |
cgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgat |
222 |
Q |
| |
|
||||||||||| ||||| | ||| | |||||||| || ||||||||||| || ||||||||| | ||||||||| ||| ||| ||||| ||||| |
|
|
| T |
30975429 |
cgccaagcaaaaagactaacttttaggggcacttctttattccaaatttctgttatgtgagtagttgtcaagttgttgttgactgatgacaacaaatgat |
30975528 |
T |
|
| Q |
223 |
tataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaa |
282 |
Q |
| |
|
||||| |||||| |||||||| || |||| ||||| ||||| ||||| ||||||||| |
|
|
| T |
30975529 |
tataagaacttgtgacattatatttgctggacgcatgtaagtgtcaaatttacctgtcaa |
30975588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 282
Target Start/End: Original strand, 30981868 - 30982027
Alignment:
| Q |
123 |
cgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgat |
222 |
Q |
| |
|
||||||||||| ||||| | ||| | |||||||| || ||||||||||| || ||||||||| | ||||||||| ||| ||| ||||| ||||| |
|
|
| T |
30981868 |
cgccaagcaaaaagactaacttttaggggcacttctttattccaaatttctgttatgtgagtagttgtcaagttgttgttgactgatgacaacaaatgat |
30981967 |
T |
|
| Q |
223 |
tataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaa |
282 |
Q |
| |
|
||||| |||||| |||||||| || |||| ||||| ||||| ||||| ||||||||| |
|
|
| T |
30981968 |
tataagaacttgtgacattatatttgctggacgcatgtaagtgtcaaatttacctgtcaa |
30982027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 282
Target Start/End: Original strand, 30988032 - 30988191
Alignment:
| Q |
123 |
cgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggtgaatgtcaacagatgat |
222 |
Q |
| |
|
||||||||||| ||||| | ||| | |||||||| || ||||||||||| || ||||||||| | ||||||||| ||| ||| ||||| ||||| |
|
|
| T |
30988032 |
cgccaagcaaaaagactaacttttaggggcacttctttattccaaatttctgttatgtgagtagttgtcaagttgttgttgactgatgacaacaaatgat |
30988131 |
T |
|
| Q |
223 |
tataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtcaa |
282 |
Q |
| |
|
||||| |||||| |||||||| || |||| ||||| ||||| ||||| ||||||||| |
|
|
| T |
30988132 |
tataagaacttgtgacattatatttgctggacgcatgtaagtgtcaaatttacctgtcaa |
30988191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 2e-79; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 4532570 - 4532748
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4532570 |
gaataagtgttttgcatcttctatcatgccgcatccccccacgcataaatgaacattcagatgtaaaatgtgtcttttgattaaattgtccgttgtaggt |
4532669 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgag |
183 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
4532670 |
aatctatcacgtaacaagcgccaagcgaagagactgattttcagagacacttccttgttccaaatttcagtcatgtgag |
4532748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 34548972 - 34548697
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||| | ||||||| |||||||| || ||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34548972 |
agatgaataagtgttttgcgtcttctatcgtaccgcatccacccacgcataactgagcattcggatgtaaaatgtgtcttttgattagattgtccgttgt |
34548873 |
T |
|
| Q |
101 |
aagtaatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgtta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||| | |
|
|
| T |
34548872 |
tggtaatctatcacgtaacaagcgccaagcgaagaggctgattttcaggggcacttccttgttccaaatttcaataatgtgagtaaccaccaagttggt- |
34548774 |
T |
|
| Q |
201 |
ttggtgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| ||||||||| ||| |||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
34548773 |
ttg----atgtcaacatatggttataagcacttgagacattataactgctggaggcatgtaagtgccaaatccacctgtca |
34548697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 5 - 277
Target Start/End: Original strand, 31912042 - 31912314
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||||||| |||||||||||| | || ||| ||||| || || | | |||| ||| ||||||||||||||||||||| |||||||||||| || |
|
|
| T |
31912042 |
gaataagtgttttacatcttctatcacgtcgtatccacccacacataactaagcatttggaagtaaaatgtgtcttttgattagattgtccgttgttggt |
31912141 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||| || | |
|
|
| T |
31912142 |
aatctatcacgtaacaagcgccaaccgaagacactgattttcaggggcacttccttgttccaaatttctgtcatgtgagtaattgtcaagttgttgttag |
31912241 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacct |
277 |
Q |
| |
|
| ||||||||| ||| |||||| ||||||| |||||||||||| |||||||||| ||| | |||||||||| |
|
|
| T |
31912242 |
ttgatgtcaacacatggttataagcacttgtgacattataactgctggaggcatgtaagggtgaaatccacct |
31912314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 26676506 - 26676230
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| |||||||| || ||| |||| || |||||||||||||||| |||| |||||||||||| || |
|
|
| T |
26676506 |
gaataagtgttttgcatcccccatcatgccgcatccacccacgcataactgagcatttagaagtaaaatgtgtcttttaattagattgtccgttgttggt |
26676407 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || |||| ||||||||||||||||| ||||||| || |||||||||||||||||||| | | ||||||| | ||||||||||| || |
|
|
| T |
26676406 |
aatctatcccgcaacagacgccaagcaaagagactaattttcaggggtacttccttgttccaaatttctgacgtgtgagttgctgacaagttgttgctga |
26676307 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| | ||| |||||||| |||||| ||||||| |||||||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
26676306 |
ttagtgttaacagatggttataagcacttgtgacattatagttgttggaagcatgtaagtgccaaatccacctgtca |
26676230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 33676989 - 33677147
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||||||| || ||| |||| ||| |||||||||||||||| |||| ||| |||||||| || |
|
|
| T |
33676989 |
gaataagtgttttgcatcctccatcatgccgcatccacccacgcataattgagcatttggaagtaaaatgtgtcttttaattagattatccgttgttggt |
33677088 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgtt |
163 |
Q |
| |
|
|||||||| || |||| | |||||||||| |||| ||||| | |||||||||||||| |
|
|
| T |
33677089 |
aatctatcccgcaacagacaccaagcaaagtgactaatttttaggggcacttccttgtt |
33677147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 15759568 - 15759413
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| | ||| ||||||| |||||| |||| ||||| || | ||| |||| || |||| ||| |||||||| | ||||||||| ||||| || |
|
|
| T |
15759568 |
gaataagtgctctgcgtcttctaacatgccacatccgcccacacaaacttgagcatttggttgtataatttgtcttttaactaaattgtctgttgttggt |
15759469 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttcctt |
160 |
Q |
| |
|
||||||| | | | || ||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
15759468 |
aatctattaagaagcagacgccaagcaaagagactgacttttaaaggcacttcctt |
15759413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 46731678 - 46731589
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtc |
94 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||| |||||||| || ||| |||| ||| ||||||| |||||||| |||| |||||| |
|
|
| T |
46731678 |
gaataagtgttttgcatcctccatcataccgcatccacccacgcataactgagcatttggaagtaaaatatgtcttttaattagattgtc |
46731589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19228377 - 19228438
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattc |
62 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||| |||| ||| || ||||||||| |
|
|
| T |
19228377 |
agatgaataagtgttttgcatcttctatcgtaccgcatccacccatgcaaaactgaacattc |
19228438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 109; Significance: 2e-54; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 26369428 - 26369704
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
|||||| ||||||||||| || | ||| ||||||| |||||||| || ||| |||| ||| |||||||||||||||| |||| |||||||||||| || |
|
|
| T |
26369428 |
gaataaatgttttgcatcctccagcataccgcatccacccacgcataactgagcatttggaagtaaaatgtgtcttttaattagattgtccgttgttggt |
26369527 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
|||||||| || |||| |||||||||||||||||| ||||||| || |||||||||||||||||||| | | ||||||| | ||||||||||| || |
|
|
| T |
26369528 |
aatctatcccgcaacaggcgccaagcaaagagactaattttcaggggaacttccttgttccaaatttctgacgtgtgagttgctgacaagttgttgctga |
26369627 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||| |||||||| |||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
26369628 |
ttggtgttaacagatggttataagcacttgtgacattataattgttggaagcatgtaagtgccaaatccacctgtca |
26369704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 22580885 - 22581161
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagt |
104 |
Q |
| |
|
||||||||| ||||||||||| | ||||| ||||| || ||||| | ||| ||||| || | ||||||||||||| |||| ||| || ||||| || |
|
|
| T |
22580885 |
gaataagtgctttgcatcttccaacatgctgcatccaccaacgcatagctgagcattcagaaatgaaatgtgtcttttaattagattatcagttgttggt |
22580984 |
T |
|
| Q |
105 |
aatctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattgg |
204 |
Q |
| |
|
||||||||||| | || |||||||| ||| ||| ||| ||||| ||||||||| | ||| ||||||| ||| ||||| | | | ||||||||| ||| |
|
|
| T |
22580985 |
aatctatcacgcatcaggcgccaaggaaaaagattgagtttcaggggcacttccattttctaaatttctttcaagtgagcagctgccaagttgttgttga |
22581084 |
T |
|
| Q |
205 |
tgaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
| ||||||||| ||| |||||| ||||||| ||||||||| || |||||||||| |||| |||||||||||||||| |
|
|
| T |
22581085 |
tcgatgtcaacaaatggttataagcacttgtgacattataaatgatggaggcatgtaagtaccaaatccacctgtca |
22581161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19021011 - 19020942
Alignment:
| Q |
1 |
agatgaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaa |
70 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19021011 |
agatgaataagtgttttgcatcttctatcatgttgcatcgccccacgcagaaatgaacattctgatgtaa |
19020942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 40973765 - 40973994
Alignment:
| Q |
6 |
aataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagta |
105 |
Q |
| |
|
|||||||||||||| ||||| | |||||| |||| ||||| || || ||| |||| | |||||||| |||||||| | ||||||||| |||| ||| |
|
|
| T |
40973765 |
aataagtgttttgcgtcttccagcatgccacatccgcccacacaaaactgagcatttgattgtaaaatttgtcttttaactaaattgtctattgttggta |
40973864 |
T |
|
| Q |
106 |
atctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggt |
205 |
Q |
| |
|
|||||| || |||| ||||||||||| ||||||| ||| |||||||||||||| |||||||||||||| |||||| | | | |||||||||||| || |
|
|
| T |
40973865 |
atctattacacaacagacgccaagcaaaaagactgacttttaaaggcacttccttattccaaatttcagttatgtgatcagctgccaagttgttatttgt |
40973964 |
T |
|
| Q |
206 |
gaatgtcaacagatgattataaacacttgt |
235 |
Q |
| |
|
||| ||||| || |||||| ||||||| |
|
|
| T |
40973965 |
tgatgacaacaagtggttataagcacttgt |
40973994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 22639176 - 22639100
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttt |
81 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||| |
|
|
| T |
22639176 |
gaataaatgttttgcatcttctatcatgccgcatccccccatacaaaaatgaacattcggatataaaatgtgtcttt |
22639100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0432 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0432
Description:
Target: scaffold0432; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 6 - 281
Target Start/End: Complemental strand, 8709 - 8434
Alignment:
| Q |
6 |
aataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgtaagta |
105 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |||| ||||| || || | | |||| || |||||||| |||||||| | || |||||| ||||| ||| |
|
|
| T |
8709 |
aataagtgttttgcgtcttccatcatgccacatccgcccacacaaaacttagcattgggttgtaaaatttgtcttttaactagattgtctgttgttggta |
8610 |
T |
|
| Q |
106 |
atctatcacgtaacaagcgccaagcaaagagactgattttcaaaggcacttccttgttccaaatttcagtcatgtgagtaaccgacaagttgttattggt |
205 |
Q |
| |
|
||||| || |||| ||||||||||| ||||||| ||| |||||||||||||| || ||||||| ||| |||||| | | | |||||||||||| || |
|
|
| T |
8609 |
atctaatacacaacagacgccaagcaaaaagactgacttttaaaggcacttccttatttcaaattttagttatgtgatcagctgccaagttgttatttgt |
8510 |
T |
|
| Q |
206 |
gaatgtcaacagatgattataaacacttgtaacattataactgttggaggcatgcaagtgccaaatccacctgtca |
281 |
Q |
| |
|
||| ||||| || |||||| ||||||| | ||||| ||||||| |||| || |||||||||||||||||| |
|
|
| T |
8509 |
tgatgacaacaagtggttataagcacttgtgaagttatatttgttggatacatgtaaatgccaaatccacctgtca |
8434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 23402 - 23307
Alignment:
| Q |
5 |
gaataagtgttttgcatcttctatcatgccgcatcgccccacgcagaaatgaacattcggatgtaaaatgtgtcttttgattaaattgtccgttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||| || ||| ||||| ||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
23402 |
gaataagtgttttgcatcttctatcataccgcatccacccacgcataactgagcattcagatataaaatgtgtcttttgattagattgtccattgt |
23307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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