View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2729_low_114 (Length: 209)
Name: NF2729_low_114
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2729_low_114 |
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Alignment Details
Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 33787925 - 33788069
Alignment:
| Q |
45 |
caagtgattagcaaagagcacaaaaacatgtttcgtccgttttacaaggaaaatacatgtgtcggttaaatctcagatagagtgtggtctgcgtgacaca |
144 |
Q |
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| T |
33787925 |
caagtgattagcaaagagcacagaaacatgtttcgtccgttttacaaggaaaatacatgtgtcggttaaatctcaggtagagtgtggtctgcgtgacaca |
33788024 |
T |
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| Q |
145 |
tagcctaaaatatgtaacatctgaccacatgcaattaatgaaaaa |
189 |
Q |
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| T |
33788025 |
tagcctaaaatatgtaacatttgaccacatgcaattaatgaaaaa |
33788069 |
T |
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