View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2729_low_17 (Length: 552)

Name: NF2729_low_17
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2729_low_17
NF2729_low_17
[»] chr2 (41 HSPs)
chr2 (29-552)||(43173112-43173618)
chr2 (167-549)||(43163561-43163939)
chr2 (106-184)||(11513865-11513943)
chr2 (148-212)||(34652033-34652097)
chr2 (106-186)||(36863648-36863728)
chr2 (106-212)||(1939329-1939435)
chr2 (106-182)||(8017401-8017477)
chr2 (111-207)||(43205281-43205377)
chr2 (134-248)||(43985204-43985319)
chr2 (106-184)||(6993749-6993827)
chr2 (106-212)||(9478266-9478372)
chr2 (110-184)||(18066099-18066173)
chr2 (105-218)||(31096266-31096380)
chr2 (106-212)||(35485884-35485990)
chr2 (127-212)||(10285848-10285933)
chr2 (126-183)||(16353848-16353905)
chr2 (106-195)||(22681199-22681288)
chr2 (106-195)||(28933791-28933880)
chr2 (106-142)||(3423835-3423871)
chr2 (108-184)||(6167308-6167384)
chr2 (106-218)||(29316766-29316878)
chr2 (106-142)||(31740026-31740062)
chr2 (107-151)||(33944573-33944617)
chr2 (106-231)||(41851142-41851268)
chr2 (107-142)||(1160811-1160846)
chr2 (106-193)||(6988082-6988169)
chr2 (106-153)||(25609763-25609810)
chr2 (108-183)||(39983311-39983386)
chr2 (106-184)||(11307279-11307357)
chr2 (106-184)||(12313198-12313276)
chr2 (157-215)||(16867757-16867815)
chr2 (106-140)||(17952770-17952804)
chr2 (106-212)||(33942117-33942223)
chr2 (106-212)||(43141838-43141944)
chr2 (106-167)||(5043602-5043663)
chr2 (106-195)||(25790093-25790182)
chr2 (110-174)||(1625871-1625935)
chr2 (108-184)||(17221565-17221641)
chr2 (106-142)||(20059109-20059145)
chr2 (153-253)||(24098116-24098215)
chr2 (106-142)||(34339873-34339909)
[»] chr1 (46 HSPs)
chr1 (108-212)||(7218071-7218175)
chr1 (108-175)||(25006068-25006135)
chr1 (106-184)||(27738205-27738283)
chr1 (106-195)||(4200196-4200285)
chr1 (121-218)||(11695843-11695940)
chr1 (109-193)||(17269220-17269304)
chr1 (107-191)||(5150905-5150989)
chr1 (106-210)||(30371115-30371219)
chr1 (106-193)||(16322816-16322903)
chr1 (106-218)||(28689443-28689557)
chr1 (106-213)||(30257650-30257757)
chr1 (126-212)||(4622080-4622166)
chr1 (106-212)||(12477284-12477390)
chr1 (106-212)||(17628566-17628672)
chr1 (106-140)||(28467376-28467410)
chr1 (108-210)||(44031998-44032100)
chr1 (110-183)||(26630434-26630507)
chr1 (106-212)||(35017541-35017649)
chr1 (106-174)||(5421955-5422023)
chr1 (106-142)||(15361680-15361716)
chr1 (146-218)||(27140485-27140557)
chr1 (106-210)||(31517739-31517843)
chr1 (106-142)||(48830143-48830179)
chr1 (107-142)||(9656618-9656653)
chr1 (106-141)||(10439653-10439688)
chr1 (105-184)||(44422665-44422744)
chr1 (106-193)||(45205035-45205122)
chr1 (127-193)||(12564515-12564581)
chr1 (106-212)||(15515508-15515614)
chr1 (109-175)||(25005831-25005897)
chr1 (144-218)||(35925695-35925769)
chr1 (106-184)||(49888734-49888812)
chr1 (120-193)||(23902083-23902156)
chr1 (107-184)||(27820362-27820439)
chr1 (113-218)||(29007707-29007812)
chr1 (112-180)||(8130409-8130477)
chr1 (106-178)||(10581108-10581180)
chr1 (106-218)||(10854700-10854812)
chr1 (126-206)||(12564877-12564957)
chr1 (106-142)||(15360861-15360897)
chr1 (106-142)||(28788605-28788641)
chr1 (105-149)||(37841964-37842008)
chr1 (106-142)||(43372026-43372062)
chr1 (106-142)||(44936657-44936693)
chr1 (106-142)||(45990125-45990161)
chr1 (106-142)||(49517037-49517073)
[»] chr4 (40 HSPs)
chr4 (106-212)||(52735089-52735194)
chr4 (107-253)||(21157736-21157883)
chr4 (106-212)||(2996540-2996646)
chr4 (107-193)||(49219107-49219193)
chr4 (106-142)||(4071849-4071885)
chr4 (107-218)||(23819057-23819168)
chr4 (107-230)||(30207550-30207672)
chr4 (106-212)||(11264268-11264374)
chr4 (106-216)||(11802501-11802611)
chr4 (106-160)||(13949893-13949947)
chr4 (146-184)||(28615530-28615568)
chr4 (106-184)||(30581702-30581780)
chr4 (107-141)||(55437354-55437388)
chr4 (106-215)||(54325031-54325140)
chr4 (106-142)||(8130141-8130177)
chr4 (106-142)||(11917526-11917562)
chr4 (108-212)||(20936226-20936330)
chr4 (110-142)||(24091434-24091466)
chr4 (109-193)||(28300315-28300399)
chr4 (106-193)||(10192251-10192337)
chr4 (106-169)||(27043870-27043933)
chr4 (106-193)||(47118981-47119068)
chr4 (106-212)||(6987738-6987844)
chr4 (108-142)||(21952930-21952964)
chr4 (164-253)||(27123307-27123397)
chr4 (106-183)||(9760407-9760484)
chr4 (105-218)||(29263336-29263449)
chr4 (112-169)||(44638213-44638270)
chr4 (106-195)||(54069431-54069520)
chr4 (148-212)||(1965950-1966014)
chr4 (109-212)||(2980462-2980566)
chr4 (145-209)||(4798566-4798630)
chr4 (109-193)||(18628559-18628643)
chr4 (108-140)||(21879418-21879450)
chr4 (106-142)||(27623602-27623638)
chr4 (106-142)||(30024667-30024703)
chr4 (106-142)||(31038934-31038970)
chr4 (106-138)||(32724086-32724118)
chr4 (120-184)||(38346011-38346075)
chr4 (126-245)||(52754587-52754706)
[»] chr7 (28 HSPs)
chr7 (106-246)||(48157082-48157223)
chr7 (106-195)||(28165058-28165147)
chr7 (106-212)||(12110327-12110433)
chr7 (106-183)||(30456476-30456553)
chr7 (106-195)||(40689000-40689089)
chr7 (106-213)||(44151476-44151583)
chr7 (106-184)||(11208416-11208494)
chr7 (106-184)||(27548230-27548308)
chr7 (113-182)||(24895330-24895399)
chr7 (113-182)||(24909638-24909707)
chr7 (157-218)||(27626114-27626175)
chr7 (106-195)||(38010681-38010770)
chr7 (107-183)||(17989049-17989125)
chr7 (106-142)||(23918924-23918960)
chr7 (92-139)||(27121656-27121704)
chr7 (106-142)||(31002728-31002764)
chr7 (106-212)||(46825065-46825173)
chr7 (106-169)||(1417231-1417294)
chr7 (106-209)||(24363601-24363704)
chr7 (107-142)||(40428523-40428558)
chr7 (107-142)||(49060508-49060543)
chr7 (106-212)||(39907992-39908097)
chr7 (106-167)||(22296270-22296331)
chr7 (111-184)||(23721478-23721551)
chr7 (106-139)||(47046178-47046211)
chr7 (106-142)||(12835004-12835040)
chr7 (107-135)||(30751485-30751513)
chr7 (106-142)||(35536074-35536110)
[»] chr6 (37 HSPs)
chr6 (106-225)||(7785728-7785845)
chr6 (106-181)||(1402963-1403038)
chr6 (106-212)||(9667982-9668088)
chr6 (106-229)||(2117370-2117493)
chr6 (106-231)||(4420612-4420735)
chr6 (111-212)||(6647359-6647460)
chr6 (146-218)||(31624097-31624169)
chr6 (106-253)||(32386518-32386666)
chr6 (106-212)||(281845-281951)
chr6 (104-218)||(283060-283174)
chr6 (164-230)||(8420176-8420242)
chr6 (110-212)||(25100014-25100116)
chr6 (106-179)||(415271-415344)
chr6 (107-140)||(2732308-2732341)
chr6 (105-162)||(4006680-4006737)
chr6 (106-191)||(25426137-25426222)
chr6 (106-139)||(27595637-27595670)
chr6 (106-139)||(27693509-27693542)
chr6 (107-151)||(1904783-1904827)
chr6 (107-151)||(1909016-1909060)
chr6 (106-142)||(22742333-22742369)
chr6 (106-142)||(29274296-29274332)
chr6 (108-212)||(30522437-30522541)
chr6 (106-137)||(3217262-3217293)
chr6 (93-139)||(27615343-27615390)
chr6 (106-193)||(28088238-28088325)
chr6 (107-182)||(33787772-33787847)
chr6 (164-253)||(2460106-2460196)
chr6 (106-184)||(24838768-24838846)
chr6 (106-140)||(27713474-27713508)
chr6 (188-253)||(32976027-32976093)
chr6 (157-246)||(34939762-34939852)
chr6 (106-139)||(7713992-7714025)
chr6 (106-142)||(2027473-2027509)
chr6 (148-212)||(2455819-2455883)
chr6 (106-142)||(5550099-5550135)
chr6 (106-194)||(9093571-9093659)
[»] chr8 (31 HSPs)
chr8 (114-218)||(5088823-5088931)
chr8 (106-212)||(12361159-12361265)
chr8 (106-184)||(3537054-3537134)
chr8 (106-238)||(6509273-6509406)
chr8 (105-186)||(9836877-9836958)
chr8 (107-211)||(28769337-28769441)
chr8 (107-194)||(7918788-7918875)
chr8 (108-183)||(29973050-29973125)
chr8 (106-184)||(6864484-6864562)
chr8 (106-212)||(39551206-39551312)
chr8 (106-183)||(4558765-4558842)
chr8 (106-139)||(29262944-29262977)
chr8 (146-195)||(43504758-43504807)
chr8 (106-142)||(1470923-1470959)
chr8 (115-195)||(13652191-13652271)
chr8 (115-195)||(13710834-13710914)
chr8 (115-215)||(24558829-24558929)
chr8 (106-162)||(34770859-34770915)
chr8 (106-193)||(41336661-41336748)
chr8 (157-212)||(42597456-42597511)
chr8 (108-142)||(7878553-7878587)
chr8 (146-212)||(20672757-20672823)
chr8 (106-212)||(41620288-41620394)
chr8 (111-212)||(11795064-11795165)
chr8 (106-142)||(787173-787209)
chr8 (109-165)||(9834833-9834889)
chr8 (106-142)||(11376670-11376706)
chr8 (148-212)||(25869263-25869327)
chr8 (106-142)||(35374440-35374476)
chr8 (106-218)||(42215297-42215409)
chr8 (106-142)||(42237489-42237525)
[»] chr3 (35 HSPs)
chr3 (111-212)||(37273103-37273207)
chr3 (109-218)||(21367637-21367747)
chr3 (106-212)||(21574458-21574563)
chr3 (121-218)||(50952314-50952412)
chr3 (106-230)||(20192585-20192709)
chr3 (106-218)||(36139845-36139957)
chr3 (106-141)||(1395638-1395673)
chr3 (107-169)||(19679368-19679430)
chr3 (106-195)||(24085352-24085442)
chr3 (106-212)||(36646379-36646485)
chr3 (120-218)||(45541552-45541650)
chr3 (122-191)||(901907-901976)
chr3 (106-151)||(32555039-32555084)
chr3 (106-193)||(2318611-2318699)
chr3 (106-194)||(24887298-24887386)
chr3 (61-142)||(32703065-32703141)
chr3 (109-232)||(1217777-1217900)
chr3 (106-213)||(24235680-24235786)
chr3 (113-184)||(51510218-51510289)
chr3 (145-213)||(52323890-52323960)
chr3 (110-152)||(28779327-28779369)
chr3 (106-212)||(44374642-44374747)
chr3 (126-195)||(14548735-14548804)
chr3 (106-167)||(21872313-21872374)
chr3 (105-218)||(52618969-52619082)
chr3 (106-142)||(23315593-23315629)
chr3 (106-218)||(23785222-23785334)
chr3 (106-134)||(25195391-25195419)
chr3 (106-182)||(30956653-30956729)
chr3 (106-182)||(30972465-30972541)
chr3 (92-184)||(32069103-32069194)
chr3 (108-176)||(33405200-33405268)
chr3 (106-218)||(36101535-36101647)
chr3 (106-142)||(37689451-37689487)
chr3 (106-162)||(40122800-40122855)
[»] chr5 (38 HSPs)
chr5 (106-178)||(38047886-38047958)
chr5 (106-193)||(12425538-12425625)
chr5 (107-193)||(12975315-12975400)
chr5 (106-193)||(10272447-10272534)
chr5 (106-165)||(34205206-34205265)
chr5 (109-232)||(41957428-41957551)
chr5 (107-180)||(912677-912751)
chr5 (106-184)||(26516367-26516445)
chr5 (110-184)||(39105435-39105509)
chr5 (109-218)||(4273368-4273477)
chr5 (106-218)||(14295473-14295585)
chr5 (106-142)||(35135729-35135765)
chr5 (145-212)||(17368682-17368749)
chr5 (126-193)||(26005013-26005080)
chr5 (106-141)||(32969185-32969220)
chr5 (106-209)||(34690841-34690943)
chr5 (106-184)||(9202773-9202851)
chr5 (129-218)||(10391331-10391421)
chr5 (109-215)||(18875331-18875437)
chr5 (106-212)||(32172620-32172726)
chr5 (157-215)||(33533533-33533591)
chr5 (106-184)||(35550916-35550993)
chr5 (110-184)||(35553213-35553287)
chr5 (108-169)||(3951584-3951645)
chr5 (106-139)||(8158371-8158404)
chr5 (158-231)||(31723824-31723897)
chr5 (119-184)||(32408617-32408682)
chr5 (106-155)||(36539713-36539762)
chr5 (126-195)||(37588374-37588443)
chr5 (106-167)||(41277392-41277453)
chr5 (106-142)||(583840-583876)
chr5 (112-184)||(7319379-7319451)
chr5 (126-218)||(13604840-13604932)
chr5 (126-218)||(21768188-21768280)
chr5 (106-142)||(32059656-32059692)
chr5 (145-209)||(37611215-37611279)
chr5 (145-209)||(37787945-37788009)
chr5 (106-142)||(39750110-39750146)
[»] scaffold0024 (1 HSPs)
scaffold0024 (106-166)||(27543-27603)
[»] scaffold0153 (2 HSPs)
scaffold0153 (107-142)||(6565-6600)
scaffold0153 (107-142)||(13585-13620)
[»] scaffold0015 (1 HSPs)
scaffold0015 (107-138)||(69014-69045)
[»] scaffold0349 (1 HSPs)
scaffold0349 (106-140)||(18436-18470)
[»] scaffold0085 (1 HSPs)
scaffold0085 (106-134)||(34072-34100)


Alignment Details
Target: chr2 (Bit Score: 452; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 29 - 552
Target Start/End: Original strand, 43173112 - 43173618
Alignment:
Q  29 gtaaaaggaaaaataaacagcttcataagcgttcatataaatgcttatgtataatctatttcaatttctataatattgataaaataaagtcaaattattt 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173112 gtaaaaggaaaaataaacagcttcataagcgttcatataaatgcttatgtataatctatttcaatttctataatattgataaaataaagtcaaattattt 43173211  T
Q  129 tcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagct 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  43173212 tcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgt----- 43173306  T
Q  229 cttcaaacagtttcacaagtacttacactttttccttttccaaagatatccagatgatatttatgacagaacatggacatcttataattcaattgattgg 328  Q
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173307 ------------tcacaagtacttacactttttccttttccaaagatatccagatgatatttatgacagaacatggacatcttataattcaattgattgg 43173394  T
Q  329 gaaaaaatcgacacttcactcaccatggaccaaagagcacctccattcaactttttaatggcaccaccctccactgtcatgagaacaacagcaattccag 428  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173395 gaaaaaatcgactcttcactcaccatggaccaaagagcacctccattcaactttttaatggcaccaccctccactgtcatgagaacaacagcaattccag 43173494  T
Q  429 caaatgccagtgacaacatggaattttccttccttcccaagtataatgcctccacatattatgtgtacatgtactttgctgaaatccagaagctccaagc 528  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  43173495 caaatgccagtgacaacatggaatattccttccttcccaagtataatgcctccacatattatgtgtacatgtactttgctgaaatccagaagatccaggc 43173594  T
Q  529 aaatcaaattagagagttcaacat 552  Q
    ||||||||||||||||||||||||    
T  43173595 aaatcaaattagagagttcaacat 43173618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 167 - 549
Target Start/End: Original strand, 43163561 - 43163939
Alignment:
Q  167 agatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctcttcaaacagtttcacaagtacttacactttttccttt 266  Q
    ||||||||||| || ||||| |||||| | |||||| |||| |||||||||| || ||| |||| ||||| |||||||||||||||||||||||||||||    
T  43163561 agatcttatggtaa-aagttaaaaacatcttgtggaaatgtaataaactgtttctataaactctccaaactgtttcacaagtacttacactttttccttt 43163659  T
Q  267 tccaaagatatccagatgatatttatgacagaacatggacatcttataattcaattgattgggaaaaaatcgacacttcactcaccatggaccaaagagc 366  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||   ||    
T  43163660 tccaaagatatccagatgatgtttatgacagaacatggacaccttataactcaattgattggaaaaaaatagacacttcactcaccatagaccaa---gc 43163756  T
Q  367 acctccattcaactttttaatggcaccaccctccactgtcatgagaacaacagcaattccagcaaatgccagtgacaacatggaattttccttccttccc 466  Q
    |||| |||||| ||||     || ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43163757 accttcattcagctttacgccggtaccaccctccaatgtgatgcgaacaacagcaattccagcaaatgccagtgacaacatggaattttccttccttccc 43163856  T
Q  467 aagtataatgcctccacatattatgtgtacatgtactttgctgaaatccagaagctccaagcaaatcaaattagagagttcaa 549  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  43163857 aagtataattcctccagatattatgtgtacatgtactttgctgaaatccagaagctccaggaaaatcaaatcagagagttcaa 43163939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 11513865 - 11513943
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||| ||| |||||| |||||| ||| ||||||||||    
T  11513865 gataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataag 11513943  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 34652097 - 34652033
Alignment:
Q  148 tttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||| ||| ||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataa 34652033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 36863728 - 36863648
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtt 186  Q
    |||||||||||||||||  ||||| ||||||| ||||  ||||||| ||| ||||||||||||| |||||| |||||||||    
T  36863728 gataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaataagtt 36863648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 1939435 - 1939329
Alignment:
Q  106 gataaaataaagtcaaattattttcatata-agctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggaca 204  Q
    ||||||||||||| ||| |||||||||||  |||||||  | ||||| ||| |||||  |||||| |||||||||||||||| |||||||| | ||||||    
T  1939435 gataaaataaagtgaaactattttcatattgagctataact-gttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggaca 1939337  T
Q  205 tgtcataa 212  Q
    ||||||||    
T  1939336 tgtcataa 1939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 8017401 - 8017477
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaata 182  Q
    ||||||| ||||| |||||||||||||||||||| ||   |||||| ||| ||||||||||||| |||||| |||||    
T  8017401 gataaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaata 8017477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 43205281 - 43205377
Alignment:
Q  111 aataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    ||||||| |||| | |||||||||||| |||| | |||||| ||| ||||||  ||||| |||||||||||||||| |||||||  || ||||||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataagttgaaaacagtttgcggacatgt 43205377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 43985204 - 43985319
Alignment:
Q  134 taagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctct-tc 232  Q
    ||||||||| ||||||||| || |||| | || ||| |||||||||| ||||| |||| ||| | ||||||||||||||  |||| | |||| |||| ||    
T  43985204 taagctataatttgtttttgtaagctaccgtgaagagcttatggaaacaagttgaaaaaagcttatggacatgtcataagttgtttcagtaatctctctc 43985303  T
Q  233 aaacagtttcacaagt 248  Q
    ||||||||| ||||||    
T  43985304 aaacagttttacaagt 43985319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 6993827 - 6993749
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||| |||||||||| |||||||||||||||  ||||||| ||| |||||  | |||| |||||| |||||||    
T  6993827 gataaaataaggtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataag 6993749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 9478266 - 9478372
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||| ||||| ||||||||||||||||||||  ||| ||  || |||||| ||||||  | |||||| |||| | |||||||| | |||||||    
T  9478266 gataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggagagttgatggaagtaagatgaaaacagcttatggacat 9478365  T
Q  206 gtcataa 212  Q
    || ||||    
T  9478366 gtaataa 9478372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 18066099 - 18066173
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||| ||||| |||||||||||||||||   |||||| ||| ||||||||||||| |||| | |||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataag 18066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 31096266 - 31096380
Alignment:
Q  105 tgataaaat-aaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggac 203  Q
    ||||||||| ||||||||| | ||||||| |||||||    ||| ||| | ||||||||||  ||| |||||| |||||||||||||||||| | |||||    
T  31096266 tgataaaattaaagtcaaactgttttcatttaagctaatagttgctttcacaggctatctttaagaacttatgaaaataagtttaaaacagcttatggac 31096365  T
Q  204 atgtcataaactgtt 218  Q
    |||| || |||||||    
T  31096366 atgttattaactgtt 31096380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 35485884 - 35485990
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| |||||   |||||||||||  ||||||||||| |||||| || ||| | ||||||||| || | |||||||| | || ||||    
T  35485884 gataaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacat 35485983  T
Q  206 gtcataa 212  Q
     ||||||    
T  35485984 atcataa 35485990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 10285848 - 10285933
Alignment:
Q  127 tttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    ||||||||||||||||  | ||||  ||| |||| | | |||| |||||||||||||||| |||||||| | ||||||||||||||    
T  10285848 tttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataa 10285933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 16353848 - 16353905
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    |||||||||||||||||   |||||||||| ||||||||||||||||| || ||||||    
T  16353848 ttttcatataagctataagctgtttttataagctatcttggagatcttgtgaaaataa 16353905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 22681288 - 22681199
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    ||||||| |||| |||||| |||||||||||||||||   |||||| |||  ||||| | |||| |||||||||||||| | ||||||||    
T  22681288 gataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagc 22681199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 28933791 - 28933880
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||| || ||||||||||||||| |||| ||||  ||||||| ||| |||||| | |||| || || |||||||||| ||||||||    
T  28933791 gataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagc 28933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 3423871 - 3423835
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3423871 gataaaataaagtcaaattattttcatataacctata 3423835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 6167384 - 6167308
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||| |||||  |||| | |||||||||   |||||||||| ||||| ||||||| ||||||||||||||    
T  6167384 taaaataaagtgaaattgctttcgtttaagctataagctgtttttataagctattttggagaacttatggaaataag 6167308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 29316878 - 29316766
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||| || ||||| |||||| |||| |||||   |||||| ||  ||||||||||||| |||||||||||||| | |||| | | | || ||||    
T  29316878 gataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacat 29316779  T
Q  206 gtcataaactgtt 218  Q
    ||||||| |||||    
T  29316778 gtcataagctgtt 29316766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 31740062 - 31740026
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||||||||    
T  31740062 gataaaataaagtcaaactattttcatataagctata 31740026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 33944573 - 33944617
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttt 151  Q
    |||||||||||||||||| |||||||||||||||||  |||||||    
T  33944573 ataaaataaagtcaaattgttttcatataagctataaattgtttt 33944617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 41851268 - 41851142
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatatt--ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggac 203  Q
    ||||||||||||||||||| ||| | |||||| |||||   || |||||||| ||||||||||| | |||||||| ||||  | ||| | || | |||||    
T  41851268 gataaaataaagtcaaattgttt-cgtataagttatataagttatttttatatgctatcttggataacttatggagataaagtgaaatcggcttatggac 41851170  T
Q  204 atgtcataaactgttcctgtaagctctt 231  Q
    ||||||||| ||||| | ||||||||||    
T  41851169 atgtcataagctgtttccgtaagctctt 41851142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 1160846 - 1160811
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||||| |||||||||||||||||||    
T  1160846 ataaaataaagtcaaactattttcatataagctata 1160811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 6988082 - 6988169
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||||||||||||||||||||| ||  || ||||  ||||||| ||| ||||||||| |||  |||| |||||||| | ||||||    
T  6988082 gataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataagatgaaaaca 6988169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 25609763 - 25609810
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgttttta 153  Q
    |||||||||||||||| |||||||| |||||||||||  |||||||||    
T  25609763 gataaaataaagtcaatttattttcgtataagctataagttgttttta 25609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 39983311 - 39983386
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    ||||||||| | |||| ||||||||||||||||||  ||||||| ||| |||||| |||||| || ||| ||||||    
T  39983311 taaaataaaataaaataattttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataa 39983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 11307279 - 11307357
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||| |||||||||| |||||||||| ||||||||  || | || ||| ||||||||||||| || ||| |||||||    
T  11307279 gataaagtaaagtcaaactattttcataaaagctataacttatcttcatacgctatcttggagagctaatgaaaataag 11307357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 12313276 - 12313198
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||| ||||||||||  | ||||||| |  ||||||  ||| ||||||||||||| |||||| |||||||    
T  12313276 gataaaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataag 12313198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 16867757 - 16867815
Alignment:
Q  157 gctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaact 215  Q
    ||||||||||||| |||||||||||||||| |||||| | | || | ||||||||||||    
T  16867757 gctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataaact 16867815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 17952804 - 17952770
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagcta 140  Q
    ||||||||||||||||| |||||||||||||||||    
T  17952804 gataaaataaagtcaaactattttcatataagcta 17952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 33942117 - 33942223
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | ||||||| |||||||||  ||||||| ||| || ||| | |||| || ||| |||| || | |||||||| | || ||||    
T  33942117 gataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacat 33942216  T
Q  206 gtcataa 212  Q
    |||||||    
T  33942217 gtcataa 33942223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 43141838 - 43141944
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||| |||||||||||| ||| |||||||||||||   |||||| ||| |||||| || |||  ||||||||||||  | |||||| | | ||| |||    
T  43141838 gataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcat 43141937  T
Q  206 gtcataa 212  Q
    |||||||    
T  43141938 gtcataa 43141944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 5043663 - 5043602
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttgga 167  Q
    ||||||||||||||||| | ||||||||||||||| |  ||||||| ||| |||||| ||||    
T  5043663 gataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatgga 5043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 25790093 - 25790182
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||| | |||||||| | ||||||||||||||| |  ||||||  |||  ||||| |||||| |||||| ||||||||| ||||||||    
T  25790093 gataaagtgaagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaataagttcaaaacagc 25790182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 1625871 - 1625935
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatctta 174  Q
    ||||||||| ||||| ||||| |||||| ||||  ||||||| ||| ||||||||||||| ||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaactta 1625935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 17221641 - 17221565
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||| || |||||||||||||    |||||| ||| ||||||   ||||||||| |||||||||    
T  17221641 taaaataaagtcaaattgttctcatataagctattaagtgttttcataagctatccgagagatcttacggaaataag 17221565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 20059109 - 20059145
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  20059109 gataaaataaagtctaattactttcatataagctata 20059145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 24098116 - 24098215
Alignment:
Q  153 ataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctcttcaaacagtttcacaagtactt 252  Q
    |||| |||| ||||||| |||||||||||||| | |||||||  | ||| ||||| || || |||| |||||||||| ||||| ||||| |||||| |||    
T  24098116 atagcctattttggagagcttatggaaataagctgaaaacagtttatgggcatgttattaattgtttctgtaagctc-tcaaatagttttacaagtgctt 24098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 34339873 - 34339909
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  34339873 gataaaataaagtcaaattattttcgtataaggtata 34339909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 7218175 - 7218071
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| |||  ||||| |||||| |||||| ||||||||| |||||||| |||| || |||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgt 7218076  T
Q  208 cataa 212  Q
    |||||    
T  7218075 cataa 7218071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 25006135 - 25006068
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttat 175  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 27738283 - 27738205
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||   ||||| |||||||| |||||    
T  27738283 gataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatggatataag 27738205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 4200196 - 4200285
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||||||||||| || |||||||||||||||||| |||||||  || | |||| |||||  |||||| ||||||| ||||||||||    
T  4200196 gataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggcttatgaaaataagcttaaaacagc 4200285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 11695843 - 11695940
Alignment:
Q  121 aattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||| |||||| ||||||||||   ||||||||||| ||||  |||| | |||||| ||||||||| |||||||| | ||||||||||||||||||||    
T  11695843 aattgttttcaaataagctataaaatgtttttatagactattctggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtt 11695940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 17269220 - 17269304
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||||||||||||| ||||||||||||| |||  ||||||| ||| |||||| |||||| |||| || |||||||| ||||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttacggtaataagttaaaaaca 17269304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 5150905 - 5150989
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaa 191  Q
    |||||||||||||||| ||||||||| |||| | || |||||||| ||| |||||| || ||| ||||| |||||||||| ||||    
T  5150905 ataaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataagttgaaaa 5150989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 30371115 - 30371219
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||| ||||||| |||||||||||||||||  ||||||| ||| |  || ||||||| | ||| |||||||| | |||||| | | |||||||    
T  30371115 gataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaacttatggacat 30371214  T
Q  206 gtcat 210  Q
    |||||    
T  30371215 gtcat 30371219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 16322816 - 16322903
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||||| ||||||| |||||||||| ||| ||||   |||||| ||||||||| ||| ||| |||||||||||||| | ||||||    
T  16322816 gataaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaaca 16322903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 28689557 - 28689443
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttt--tataggctatcttggagatcttatggaaataagtttaaaacagcatgtggac 203  Q
    |||||||||||  ||| |  |||||||||||||||||  |||||||  |||| ||||||||||| | |||||| ||||||| | |||||| | | |||||    
T  28689557 gataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggac 28689458  T
Q  204 atgtcataaactgtt 218  Q
    ||||||||| |||||    
T  28689457 atgtcataagctgtt 28689443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 30257650 - 30257757
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | ||| |||||||||| ||  ||||||| |||  ||||| |||||  ||||| |||||||| | |||||||| | || ||||    
T  30257650 gataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacat 30257749  T
Q  206 gtcataaa 213  Q
    ||||||||    
T  30257750 gtcataaa 30257757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 4622080 - 4622166
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||||||||||||||||   |||||  ||| ||||||||||||| ||| || ||||||| | |||||||| | ||||||||||||||    
T  4622080 ttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataa 4622166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 12477390 - 12477284
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | ||||||| |||| |||||  | |||| ||| |||||| ||||||   |||||||||||| | |||||| | | |||||||    
T  12477390 gataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacat 12477291  T
Q  206 gtcataa 212  Q
    |||||||    
T  12477290 gtcataa 12477284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 17628566 - 17628672
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||| |||||||||||| |||||||||||  ||||   |||||||||   |||| |||||| |||| |||||||| | | |||||||| | |||||||    
T  17628566 gataaagtaaagtcaaattgttttcatataaattataagctgtttttattaactattttggaggtcttttggaaatatgctgaaaacagcttatggacat 17628665  T
Q  206 gtcataa 212  Q
    |||||||    
T  17628666 gtcataa 17628672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 28467410 - 28467376
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagcta 140  Q
    |||||||||||||||||||||||||||||||||||    
T  28467410 gataaaataaagtcaaattattttcatataagcta 28467376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 44032100 - 44031998
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    ||||||||||||||||| |||||||||||||||||   | ||||  || | ||||||| ||| ||||||||||| || | |||| ||| | |||||||||    
T  44032100 taaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaattagctgaaaatagcttatggacatgt 44032001  T
Q  208 cat 210  Q
    |||    
T  44032000 cat 44031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 26630434 - 26630507
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    ||||||||| ||||| |||||||||||||||||   |||||| ||| |||||| |||||| | |||||||||||    
T  26630434 aaataaagtaaaattgttttcatataagctataaactgttttgatacgctatcctggagaacatatggaaataa 26630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 35017541 - 35017649
Alignment:
Q  106 gataaaataaagtcaaat--tattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggac 203  Q
    |||||||||||||||||   | ||||| ||||| ||||||  |||||| ||| ||| || |||||| |||||||||||||||| |||| | | | |||||    
T  35017541 gataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggac 35017640  T
Q  204 atgtcataa 212  Q
    |||||||||    
T  35017641 atgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 5422023 - 5421955
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatctta 174  Q
    ||||||||| ||||||||| ||||| |||||||||||  ||||||| ||| |||||||| |||| ||||    
T  5422023 gataaaatatagtcaaattgttttcttataagctataagttgttttgataagctatcttagagagctta 5421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 15361680 - 15361716
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    |||||| ||||||||||||||||||||||||||||||    
T  15361680 gataaagtaaagtcaaattattttcatataagctata 15361716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 27140485 - 27140557
Alignment:
Q  146 tgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||||||||| |||||| |||||| |||||| ||||||| | |||||| | | |||||||||||||| |||||    
T  27140485 tgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtt 27140557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 31517843 - 31517739
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||| |||||  ||||||||||||||||   ||| || |||  || ||||||||| |||||| ||||||| | |||||||| | || ||||    
T  31517843 gataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacat 31517744  T
Q  206 gtcat 210  Q
    |||||    
T  31517743 gtcat 31517739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 48830179 - 48830143
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||||||||    
T  48830179 gataaaataaagtcaaactattttcatataagctata 48830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Original strand, 9656618 - 9656653
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||| |||||||||||||||||||||||    
T  9656618 ataaaataaagttaaattattttcatataagctata 9656653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 10439653 - 10439688
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctat 141  Q
    |||||||| |||||||||||||||||||||||||||    
T  10439653 gataaaatgaagtcaaattattttcatataagctat 10439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 44422665 - 44422744
Alignment:
Q  105 tgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||  ||||| | |||||||||||||||||   | |||||||| |||||| |||||| |||||| |||||||    
T  44422665 tgataaaataatctcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataag 44422744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 45205035 - 45205122
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||||||||||||| ||||| ||||||||||| |  ||||||| ||| |||||| || |||  | ||||||||||| | ||||||    
T  45205035 gataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaaca 45205122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 12564581 - 12564515
Alignment:
Q  127 tttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||| ||| ||||  ||||||| ||| ||||||||||||| |||||||||||||| | ||||||    
T  12564581 tttcatacaaggtataggttgttttcataagctatcttggagaacttatggaaataagctgaaaaca 12564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 15515508 - 15515614
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||| |||||| ||||| | ||||| |||||||||||  ||||||| ||| | |||| |||| | ||||||||||||| || |||| ||| | | |||||    
T  15515508 gatagaataaaatcaaaatgttttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataaattgaaaatagcgtattgacat 15515607  T
Q  206 gtcataa 212  Q
    |||||||    
T  15515608 gtcataa 15515614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 25005897 - 25005831
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttat 175  Q
    ||||| ||||||| || |||||||||||||||||  ||||||| ||| |||||| |||||| |||||    
T  25005897 aaaatgaagtcaacttgttttcatataagctataagttgttttcataagctatcctggagagcttat 25005831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 35925695 - 35925769
Alignment:
Q  144 tttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||||||  ||| |||||| ||||||  ||||||||||||||| |||||||| | || ||||||||||| |||||    
T  35925695 tttgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgtt 35925769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 49888734 - 49888812
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||||  |||| ||||| ||||||||||   ||||||| ||| |||||||| |||| |||||| |||||||    
T  49888734 gataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 23902156 - 23902083
Alignment:
Q  120 aaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||| ||||||||||||||||||  ||||||| | | |||||||| |||| ||||||||| |||| | ||||||    
T  23902156 aaataattttcatataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaaca 23902083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 27820439 - 27820362
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||  ||||| |||   ||||||||||||  |||||||||| |||||||||||||  ||||| |||||||    
T  27820439 ataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataag 27820362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 29007812 - 29007707
Alignment:
Q  113 taaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||||||||| |||||||||||||||||||  ||||||| || |||||  ||| | | ||||| |||||||| | |||||| | | || |||| ||||||    
T  29007812 taaagtcaaactattttcatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacatatcataa 29007713  T
Q  213 actgtt 218  Q
    | ||||    
T  29007712 attgtt 29007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 8130409 - 8130477
Alignment:
Q  112 ataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaa 180  Q
    ||||||||||| | |||||| ||||||||||  ||||||| ||| |||||| |||| | ||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatcatggaaaacttatggaaa 8130477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 10581180 - 10581108
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatgga 178  Q
    ||||||||||||||||| | ||||||| |||||||||  ||||||| ||| |||||  ||| || ||||||||    
T  10581180 gataaaataaagtcaaacttttttcatttaagctataagttgttttcataagctattatggggaacttatgga 10581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 10854700 - 10854812
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| |  |||  ||||| |||||| ||||||| |||  ||||| || | | |||| | ||||||| | |||||||| |||| ||||    
T  10854700 gataaaataaagtcaaactgattttgtataatctatatgttgttttcatatactatcctgaacagcttaagaaaataagctgaaaacagcttgtgaacat 10854799  T
Q  206 gtcataaactgtt 218  Q
    ||||||| |||||    
T  10854800 gtcataagctgtt 10854812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 12564957 - 12564877
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatg 206  Q
    |||||||||||||||||  ||||||| ||| ||||||||  ||  |||| ||||||||| | |||||||| | ||||||||    
T  12564957 ttttcatataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 15360861 - 15360897
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| | |||||||||||||||||    
T  15360861 gataaaataaagtcaaactgttttcatataagctata 15360897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 28788641 - 28788605
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| | |||||||||||||||||    
T  28788641 gataaaataaagtcaaactgttttcatataagctata 28788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 37841964 - 37842008
Alignment:
Q  105 tgataaaataaagtcaaattattttcatataagctatattttgtt 149  Q
    |||||||||||||| ||||| ||||| |||||||||||| |||||    
T  37841964 tgataaaataaagttaaattgttttcgtataagctatatgttgtt 37842008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 43372062 - 43372026
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  43372062 gataaaatagagtcaaattattttcacataagctata 43372026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 44936693 - 44936657
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  44936693 gataagataaagtcaaactattttcatataagctata 44936657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 45990161 - 45990125
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  45990161 gataaaataaagtaaaattgttttcatataagctata 45990125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 49517037 - 49517073
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  49517037 gataaaataaagtcaaattgttttcatttaagctata 49517073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 52735089 - 52735194
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||  || ||||||||| ||| ||||||||||||||  ||||| | ||| |||||||    
T  52735089 gataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataag-ctaaaataacatatggacat 52735187  T
Q  206 gtcataa 212  Q
    |||||||    
T  52735188 gtcataa 52735194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 253
Target Start/End: Original strand, 21157736 - 21157883
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatg 206  Q
    ||||| |||||||||| | ||||||| |||||||||   |||||| ||| |||||| || ||| |||||||||||||| | |||||||| | || | |||    
T  21157736 ataaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaaaaacagcttttgtaaatg 21157835  T
Q  207 tcataaactgttcctgtaagctctt-caaacagtttcacaagtactta 253  Q
    |||||| ||||| |||||||||||| |||||||| | |||||| ||||    
T  21157836 tcataagctgtttctgtaagctcttccaaacagtcttacaagtgctta 21157883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 2996540 - 2996646
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||| ||||||||| |||| ||||||| ||||  ||||||| ||| ||||||||||||| | |||| ||||||||| |||| ||| | |||||||    
T  2996540 gataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacat 2996639  T
Q  206 gtcataa 212  Q
    |||||||    
T  2996640 gtcataa 2996646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 49219107 - 49219193
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||  |||||||  |||  ||||||||||||| | ||||||    
T  49219107 ataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaaca 49219193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 4071849 - 4071885
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||||||||||||||||||||||||||    
T  4071849 gataaaataaagtcaaattattttcatataagctata 4071885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 23819057 - 23819168
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatg 206  Q
    |||||||  ||||||| | |||||||||||| ||||   |||||| ||| ||||||||| ||| ||||| |||||||| | |||||| | | ||||||||    
T  23819057 ataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatg 23819156  T
Q  207 tcataaactgtt 218  Q
    |||||| |||||    
T  23819157 tcataagctgtt 23819168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 30207672 - 30207550
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatg 206  Q
    |||||||||| ||||| | |||||||||||||||||  ||||||| ||| |||| ||| ||||  ||||||||||||| | |||||||| |   ||||||    
T  30207672 ataaaataaa-tcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatg 30207574  T
Q  207 tcataaactgttcctgtaagctct 230  Q
    |||||  |||||| | ||||||||    
T  30207573 tcatatgctgttcttataagctct 30207550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 11264268 - 11264374
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||| |||  |||| |||||||| | ||||  ||||||| ||| || ||| | |||| |||||||||||||||| |||||||  | |||||||    
T  11264268 gataaaataaactcatgttatattcatatatgttataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacat 11264367  T
Q  206 gtcataa 212  Q
    |||||||    
T  11264368 gtcataa 11264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 11802501 - 11802611
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||||| || ||| |||||||| |  ||||||| ||| |||||  |||||| ||||||  |||||| | |||||||| | ||| |||    
T  11802501 gataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaacagcttatggccat 11802600  T
Q  206 gtcataaactg 216  Q
    | |||||||||    
T  11802601 gccataaactg 11802611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 13949947 - 13949893
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggcta 160  Q
    ||||||||||||||||||| |||||||||||||||||  |||||| |||| ||||    
T  13949947 gataaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 28615530 - 28615568
Alignment:
Q  146 tgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  28615530 tgtttttataggctatcttggagagcttatggaaataag 28615568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 30581780 - 30581702
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||| |||||||| ||||||| |||||||||||   |||||| ||| | |||||||||||  |||||||||||||    
T  30581780 gataaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttggagagtttatggaaataag 30581702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 55437388 - 55437354
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctat 141  Q
    |||||||||||||||||||||||||||||||||||    
T  55437388 ataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 54325140 - 54325031
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | |||||||||||||||||   | |||| | | |||||| ||||||  ||||||| ||||  | |||||||| | |||||||    
T  54325140 gataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatggacat 54325041  T
Q  206 gtcataaact 215  Q
     |||||||||    
T  54325040 atcataaact 54325031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 8130141 - 8130177
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8130141 gataacataaagtcaaattattttcatataagctata 8130177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 11917526 - 11917562
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11917526 gataaaataaagtcaaattattttcatataacctata 11917562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 20936330 - 20936226
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    |||||| |||||||||| |||| |||||| |||||  ||||||| |||  ||||| ||||||  ||||||||||||| | |||||||| | || |||| |    
T  20936330 taaaatgaagtcaaattgtttttatataatctataggttgttttcatattctatcctggagagattatggaaataaggtgaaaacagcttatgaacatat 20936231  T
Q  208 cataa 212  Q
    |||||    
T  20936230 cataa 20936226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 24091434 - 24091466
Alignment:
Q  110 aaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||||||||||||||||||||||    
T  24091434 aaataaagtcaaattattttcatataagctata 24091466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 28300399 - 28300315
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||||||| ||||| ||||  |||||||||||   | |||| ||||||||||||| ||| |||||| ||||||||| ||||||    
T  28300399 aaaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaaca 28300315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 10192251 - 10192337
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||| |||||||||||||| |||||||||||| ||||  ||||||| | | |||||| |||||| | |||| ||||||||| ||||||    
T  10192251 gatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataagttgaaaaca 10192337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 27043933 - 27043870
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggaga 169  Q
    ||||||||||||| ||||| ||||| |||||||||||   ||||||||||  ||||||||||||    
T  27043933 gataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggaga 27043870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 47119068 - 47118981
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||| ||||| ||||| |||||||||||||||||  |||| || ||| ||||||||| ||| |||||| | ||||| | ||||||    
T  47119068 gataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaaaaca 47118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 6987844 - 6987738
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||| ||||||||| | ||||| ||| | ||||   || ||||| || |||||| |||||| |||||||||||||||| |||| ||  | |||||||    
T  6987844 gataaaacaaagtcaaactgttttcgtattaactattagttatttttttacgctatcctggagagcttatggaaataagttgaaaatagtttatggacat 6987745  T
Q  206 gtcataa 212  Q
    |||||||    
T  6987744 gtcataa 6987738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 21952930 - 21952964
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctata 21952964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 27123397 - 27123307
Alignment:
Q  164 tggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctct-tcaaacagtttcacaagtactta 253  Q
    |||||| |||||||||||||||| |||||| | |   ||||||||||||  |||| |  |||||||| ||||||||| |||||||||||||    
T  27123397 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtactta 27123307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 9760407 - 9760484
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    ||||||||||||| ||||| ||||   ||| ||||||  ||||||||||| ||||| ||||||| |||||| ||||||    
T  9760407 gataaaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 29263336 - 29263449
Alignment:
Q  105 tgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggaca 204  Q
    |||||||||||||| | ||| |||||| |||||| |||  ||||||| ||| |||||| || ||| ||| |||||||||| | |||||| | | || |||    
T  29263336 tgataaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaaca 29263435  T
Q  205 tgtcataaactgtt 218  Q
    | |||||| |||||    
T  29263436 tatcataagctgtt 29263449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 44638270 - 44638213
Alignment:
Q  112 ataaagtcaaattattttcatataagctatattttgtttttataggctatcttggaga 169  Q
    ||||||| ||||||  |||||||||||||||  |||||| |||| |||||||||||||    
T  44638270 ataaagttaaattacattcatataagctataagttgtttgtataagctatcttggaga 44638213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 54069520 - 54069431
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||||| || ||||| ||||  |||| |||||| |||||||||||| | ||| ||| ||| | |||| ||||||||| ||||||||    
T  54069520 gataaaataatgttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagc 54069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 1965950 - 1966014
Alignment:
Q  148 tttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||||||| |||||| | || ||||| |||||||||||| |||||||| | || |||||||||||    
T  1965950 tttttataagctatcctagaaatcttctggaaataagttaaaaacagcttatgaacatgtcataa 1966014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 2980566 - 2980462
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatctt-ggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    |||||||||||||| |||||||||| ||| ||||  ||||| | ||| ||||||||   ||||| |||| ||||||| | || ||||| | |||||||||    
T  2980566 aaaataaagtcaaactattttcatacaagttataagttgttctcataagctatcttcaaagatcatatgaaaataagctgaacacagcttatggacatgt 2980467  T
Q  208 cataa 212  Q
    |||||    
T  2980466 cataa 2980462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 4798630 - 4798566
Alignment:
Q  145 ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtca 209  Q
    ||||||| ||| ||||||||||||| |||||| ||||||| | |||||||| | || ||||||||    
T  4798630 ttgttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtca 4798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 18628643 - 18628559
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||| ||||||| | |||| ||||||| ||||   |||||| ||| | ||||||||||| |||||||||||||| | ||||||    
T  18628643 aaaatatagtcaaactgtttttatataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaaca 18628559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 21879418 - 21879450
Alignment:
Q  108 taaaataaagtcaaattattttcatataagcta 140  Q
    ||||||||||||||||||||||||| |||||||    
T  21879418 taaaataaagtcaaattattttcatttaagcta 21879450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 27623602 - 27623638
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  27623602 gataaaataaagtcaaactattttaatataagctata 27623638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 30024667 - 30024703
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  30024667 gataaaataaagtaaaattgttttcatataagctata 30024703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 31038970 - 31038934
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  31038970 gataaaataaagtcaaattgttttcatataagttata 31038934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 32724086 - 32724118
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagc 138  Q
    ||||||||||||||||| |||||||||||||||    
T  32724086 gataaaataaagtcaaactattttcatataagc 32724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 38346075 - 38346011
Alignment:
Q  120 aaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||| |||||| |||||  |||||| ||||||||||||||| |  ||||| |||||||    
T  38346075 aaattattttcgtataagatatatgatgttttcataggctatcttggataggttatgtaaataag 38346011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 52754587 - 52754706
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaa 225  Q
    |||||| ||||||||||   |||||| ||| ||||| | ||| |||||| ||||||||| | ||| |||| | |||||| |||||||||||||    |||    
T  52754587 ttttcacataagctataagctgttttcataagctatttcggaaatctta-ggaaataagctgaaagcagcttatggacacgtcataaactgttttcataa 52754685  T
Q  226 gctctt-caaacagtttcaca 245  Q
    |||||| ||||||||||||||    
T  52754686 gctcttccaaacagtttcaca 52754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 48157223 - 48157082
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||| ||||| |||| |||||||||||| |||||||| | | |||||   |||||||||||||||||||| | |||||||| | |||||||    
T  48157223 gataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacat 48157124  T
Q  206 gtcataaactgttcctgtaagctct-tcaaacagtttcacaa 246  Q
    | |||||  |||| || ||||||||  |||||||| ||||||    
T  48157123 ggcataagttgtttctataagctctcccaaacagtctcacaa 48157082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 28165058 - 28165147
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||| |||||||||| |||| ||||||||||||   ||| |||||| |||||| |||||| |||||||||||||||| ||||||||    
T  28165058 gataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaacagc 28165147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 12110327 - 12110433
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||||| ||||  |||||||||||   |||||| ||| ||||||||| ||| |||||| ||||||  | |||||||  |||| ||||    
T  12110327 gataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacat 12110426  T
Q  206 gtcataa 212  Q
    |||||||    
T  12110427 gtcataa 12110433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 30456553 - 30456476
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    ||||||||||||||||||| |||||||||||| ||||  | ||||| |||  |||||||||||| |||||| ||||||    
T  30456553 gataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 40689089 - 40689000
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    ||||||||||||| |||||||||||||||||||||||   ||| || ||| |||||| |||| | |||||| ||||||| | ||||||||    
T  40689089 gataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagc 40689000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 44151583 - 44151476
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||| |||||||| ||| | ||| |||||||||||||  ||||||| |||  |||||||| | | |||||||||||||| | |||||| | | |||||||    
T  44151583 gatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacat 44151484  T
Q  206 gtcataaa 213  Q
    ||||||||    
T  44151483 gtcataaa 44151476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 11208416 - 11208494
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||| |||||   ||||||||||| |||||| ||||||| ||| ||||||||||  || |||||||||||||    
T  11208416 gataaaataaactcaaaccgttttcatataaactatatgttgttttcataagctatcttgggtattttatggaaataag 11208494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 27548230 - 27548308
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||||| |||| ||||||| |||||||||   |||||| ||| ||||||||||| | |||||||| |||||    
T  27548230 gataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttatggagataag 27548308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 24895330 - 24895399
Alignment:
Q  113 taaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaata 182  Q
    ||||||||||||||||||||||||||||||  ||||||| | | | |||  |||||| ||||||||||||    
T  24895330 taaagtcaaattattttcatataagctataagttgttttcacaagatattgtggagagcttatggaaata 24895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 24909638 - 24909707
Alignment:
Q  113 taaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaata 182  Q
    ||||||||||||||||||||||||||||||  ||||||| ||| | |||  |||||| ||| ||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttgttttcataagatattgtggagagcttgtggaaata 24909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 27626175 - 27626114
Alignment:
Q  157 gctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||||| || ||| ||||||||||||||||||||||||  | |||||||||||||| |||||    
T  27626175 gctatcatgaagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtt 27626114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 38010681 - 38010770
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    ||||||| |||| |||||| |||||||||||||||||   |||||| |||  ||||| | |||| |||||||||||||| | ||||||||    
T  38010681 gataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagc 38010770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 17989125 - 17989049
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    |||||||||||||||| | ||||||||||| ||||| |||||||| ||| ||| || || ||| |||||| ||||||    
T  17989125 ataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 23918924 - 23918960
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| |||||||||||||||||    
T  23918924 gataaaataaagtcaaattgttttcatataagctata 23918960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 27121704 - 27121656
Alignment:
Q  92 atttctataatat-tgataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  27121704 atttctataataaatgataaaataaagtcaaattgttttcatataagct 27121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 31002728 - 31002764
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||||||||    
T  31002728 gataaaataaagtcaaaatattttcatataagctata 31002764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 46825065 - 46825173
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatg-gaaataag-tttaaaacagcatgtggac 203  Q
    ||||||||||||||||||| ||||||||||||| |||    ||||| ||| ||||||||||||  |||||| |||||||| |  |||||| |  ||||||    
T  46825065 gataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaaaaaacaactcgtggac 46825164  T
Q  204 atgtcataa 212  Q
    |||||||||    
T  46825165 atgtcataa 46825173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 1417231 - 1417294
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggaga 169  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||| ||| |||| | ||||||    
T  1417231 gataaaataaagtcaaattgttttcatataagcaataagttgttttcataagctagcatggaga 1417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 24363704 - 24363601
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||| ||||||  |||||||||| | | ||||  ||||||| ||| |||||| ||||||  ||||||||||||| | |||||| | | |||||||    
T  24363704 gataaaatagagtcaatctattttcatacaggttataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacat 24363605  T
Q  206 gtca 209  Q
    ||||    
T  24363604 gtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Original strand, 40428523 - 40428558
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||| |||||||||||||||||||||||    
T  40428523 ataaaataaagttaaattattttcatataagctata 40428558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Original strand, 49060508 - 49060543
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||||||| ||||||||||||    
T  49060508 ataaaataaagtcaaattatttttatataagctata 49060543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 39908097 - 39907992
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||||||||||| ||| ||||||||||||||   || ||  ||| ||||  ||||||| ||| |||||||||| | ||| |||| | |||||||    
T  39908097 gataaaataaagtcaaataattatcatataagctataagctg-ttccataagctaaattggagagcttgtggaaataagatgaaaccagcttatggacat 39907999  T
Q  206 gtcataa 212  Q
    |||||||    
T  39907998 gtcataa 39907992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 22296331 - 22296270
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttgga 167  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||||||| |||  ||||||||||    
T  22296331 gataaaataaagttaaattattttcctataacctataaattgttttcataaactatcttgga 22296270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 23721478 - 23721551
Alignment:
Q  111 aataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||| ||||||||| ||| |||||  ||||||||||| |||||| | | |  ||||||||||||||    
T  23721478 aataaagtcaaactattttcatttaaactataagttgtttttataagctatccttgtgcgcttatggaaataag 23721551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 47046211 - 47046178
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||||||||| ||||||||||||||    
T  47046211 gataaaataaagtcaaattgttttcatataagct 47046178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 12835040 - 12835004
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  12835040 gataaaataaagtcaaattgttttcatattagctata 12835004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 135
Target Start/End: Original strand, 30751485 - 30751513
Alignment:
Q  107 ataaaataaagtcaaattattttcatata 135  Q
    |||||||||||||||||||||||||||||    
T  30751485 ataaaataaagtcaaattattttcatata 30751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 35536074 - 35536110
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  35536074 gataaaataaagtcaaattgttttcatataagttata 35536110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 7785845 - 7785728
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | |||||||||||||||||  |||| || ||  ||||| ||||||| |||||||||||||| | |||||| | | | |||||    
T  7785845 gataaaataaagtcaaactcttttcatataagctataaattgtcttcat--gctattttggagagcttatggaaataagctgaaaacaacttatagacat 7785748  T
Q  206 gtcataaactgttcctgtaa 225  Q
    ||||||| ||||| ||||||    
T  7785747 gtcataagctgtttctgtaa 7785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 1402963 - 1403038
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaat 181  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||| ||| |||||| |||||||||||| |||||    
T  1402963 gataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttatagaaat 1403038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 9668088 - 9667982
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||| ||| |||| |||| ||||||||||||||| | |||||||| |||  || | | ||||| |||||||||||||||| |||||||| | |||||||    
T  9668088 gataacatagagtcgaattgttttcatataagctacaatttgttttcataaactgtttcggagagcttatggaaataagttgaaaacagcttatggacat 9667989  T
Q  206 gtcataa 212  Q
    |||||||    
T  9667988 gtcataa 9667982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 2117370 - 2117493
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||| ||||||||| ||||||||||||| |||||  ||||||| ||| | |||| | |||| ||||| |||||||| | |||||||| | | |||||    
T  2117370 gataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaacagcttatagacat 2117469  T
Q  206 gtcataaactgttcctgtaagctc 229  Q
    | |||||| |||| || |||||||    
T  2117470 gccataaattgtttctataagctc 2117493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 4420612 - 4420735
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| ||||||  |||||||||  || |  |||  || ||||||||||||| |||||||||||||| | |||||||| | || ||||    
T  4420612 gataaaataaagtcaaactatttttgtataagctaagttat--tttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacat 4420709  T
Q  206 gtcataaactgttcctgtaagctctt 231  Q
    |||||||  |||| || |||||||||    
T  4420710 gtcataatttgtttctataagctctt 4420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 6647359 - 6647460
Alignment:
Q  111 aataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcat 210  Q
    ||||||||||||||| ||| ||||| | |||| | |||||| ||| |||||||| |||| |||||| ||||||||| |||||| | | || |||||||||    
T  6647359 aataaagtcaaattactttaatataggttataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcat 6647458  T
Q  211 aa 212  Q
    ||    
T  6647459 aa 6647460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 31624097 - 31624169
Alignment:
Q  146 tgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||||| |||||||||||||||||  ||||| ||||||||| |||||||| | || ||||||||||| |||||    
T  31624097 tgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgtt 31624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 253
Target Start/End: Complemental strand, 32386666 - 32386518
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||| |||||||| |||||||||||| ||||  ||||||| ||  | |||| |||||| |||||| ||||||| | ||||||   |||||||||    
T  32386666 gataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaacaagttgtggacat 32386567  T
Q  206 gtcataaactgttcctgtaagctc-ttcaaacagtttcacaagtactta 253  Q
    || ||||  | || |  ||||||| ||||||| || |||||||||||||    
T  32386566 gttataagatatttccataagctctttcaaacggtctcacaagtactta 32386518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 281951 - 281845
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||||||||| || |||||||||||||||||   ||| || ||| |||||| | |||| || ||||||||||| | |||||| | | | |||||    
T  281951 gataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacat 281852  T
Q  206 gtcataa 212  Q
    |||||||    
T  281851 gtcataa 281845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 283060 - 283174
Alignment:
Q  104 ttgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggac 203  Q
    ||||||||||||| ||||| | ||||| ||||||||||| | |||||  |||||||||||| |  | ||||| |||||||| | |||| ||  | |||||    
T  283060 ttgataaaataaaatcaaactgttttcgtataagctataatctgtttgcataggctatcttcggaagcttatagaaataagctgaaaatagtttatggac 283159  T
Q  204 atgtcataaactgtt 218  Q
    ||||||||| |||||    
T  283160 atgtcataagctgtt 283174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 8420242 - 8420176
Alignment:
Q  164 tggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctct 230  Q
    |||||| |||||||||||||||| |||| ||| |||||||||||||||| || || || ||||||||    
T  8420242 tggagagcttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctct 8420176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 25100014 - 25100116
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtca 209  Q
    ||||| ||||||||| |||||||| ||| ||||  ||||||| ||| ||||||||  ||| ||||| |||||||||| |||| ||||  || ||||||||    
T  25100014 aaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaatagcaaatgaacatgtca 25100113  T
Q  210 taa 212  Q
    |||    
T  25100114 taa 25100116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 415271 - 415344
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaa 179  Q
    ||||||| ||||| ||||| ||||| |||||||||||  ||||||||||| |||||  |||||| |||||||||    
T  415271 gataaaacaaagttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 415344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 2732341 - 2732308
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagcta 140  Q
    ||||||||||||||||||||||||||||||||||    
T  2732341 ataaaataaagtcaaattattttcatataagcta 2732308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 4006680 - 4006737
Alignment:
Q  105 tgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatc 162  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||||| ||| ||||||    
T  4006680 tgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatc 4006737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 25426137 - 25426222
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaa 191  Q
    |||||||||||||||||||  |||||| |||||||||   | |||||||| |||||| ||||||  |||| |||||||||| ||||    
T  25426137 gataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatcctggagaatttatagaaataagttaaaaa 25426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 27595670 - 27595637
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||||||||||||||||||||||||    
T  27595670 gataaaataaagtcaaattattttcatataagct 27595637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 27693542 - 27693509
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||||||||||||||||||||||||    
T  27693542 gataaaataaagtcaaattattttcatataagct 27693509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 1904783 - 1904827
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttt 151  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||    
T  1904783 ataaaataaagtcaaattatttttatataagctatagattgtttt 1904827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 1909016 - 1909060
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttt 151  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||    
T  1909016 ataaaataaagtcaaattatttttatataagctatagattgtttt 1909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 22742333 - 22742369
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22742333 gataaaataaagtcaaattgttttcatataagctata 22742369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 29274332 - 29274296
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29274332 gataaaataaagtcaaattgttttcatataagctata 29274296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 30522541 - 30522437
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    ||||||||||| ||| ||||||||||||||||||| | || ||||||  |||||| ||||||  ||||| ||||||| | | ||| || | || ||||||    
T  30522541 taaaataaagtgaaactattttcatataagctataatctgcttttattagctatcctggagagtttatgcaaataagctaacaacggcttttgaacatgt 30522442  T
Q  208 cataa 212  Q
    |||||    
T  30522441 cataa 30522437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 137
Target Start/End: Complemental strand, 3217293 - 3217262
Alignment:
Q  106 gataaaataaagtcaaattattttcatataag 137  Q
    ||||||||||||||||||||||||||||||||    
T  3217293 gataaaataaagtcaaattattttcatataag 3217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 27615390 - 27615343
Alignment:
Q  93 tttctataatatt-gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  27615390 tttctataataatagataaaataaagtcaaattcttttcatataagct 27615343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 28088325 - 28088238
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||||||||  || ||| |||||||||||||||||   |||||| ||| |||||| |||||| || ||||||||||| | ||||||    
T  28088325 gataaaataaatgcagattgttttcatataagctataaactgttttcataagctatcatggagagctcatggaaataagctcaaaaca 28088238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 33787847 - 33787772
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaata 182  Q
    |||||| |||||||||||  ||||||||||| ||||   |||||| ||| | ||||||||||| ||||||||||||    
T  33787847 ataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaata 33787772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 2460196 - 2460106
Alignment:
Q  164 tggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctct-tcaaacagtttcacaagtactta 253  Q
    |||||| |||||||||||||||| |||||| | |   ||||||||||||  |||| |  |||||||| ||||||||| |||||||||||||    
T  2460196 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtactta 2460106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 24838846 - 24838768
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||| |||| | ||||||||||||||||||||||   || ||| ||| |||||| |||||| ||||| ||||||||    
T  24838846 gataaaacaaagactaattattttcatataagctataagctgatttcataagctatcatggagagcttatagaaataag 24838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 27713474 - 27713508
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagcta 140  Q
    ||||||||||||||||||| |||||||||||||||    
T  27713474 gataaaataaagtcaaattcttttcatataagcta 27713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 32976027 - 32976093
Alignment:
Q  188 aaaacagcatgtggacatgtcataaactgttcctgtaagctcttc-aaacagtttcacaagtactta 253  Q
    |||||||| | |||| ||||||||| ||||| || |||||||||| ||||||| |||||||||||||    
T  32976027 aaaacagcttatggaaatgtcataagctgtttctataagctcttccaaacagtctcacaagtactta 32976093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 34939762 - 34939852
Alignment:
Q  157 gctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctcttc-aaacagtttcacaa 246  Q
    |||||| ||||||  ||||||||||||| | ||||||   | |||||||||||||| ||||| | ||||||||| | ||||||||||||||    
T  34939762 gctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaa 34939852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 7713992 - 7714025
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||||||||| ||||||||||||||    
T  7713992 gataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 2027509 - 2027473
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  2027509 gataaaataaagtcaaactattttcatataacctata 2027473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 2455819 - 2455883
Alignment:
Q  148 tttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||| ||| ||||||||||||| |||||||||||||||| |||| ||  | ||| ||||||||||    
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataa 2455883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 5550099 - 5550135
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  5550099 gataacataaagtcaaattgttttcatataagctata 5550135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 9093659 - 9093571
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacag 194  Q
    ||||||||||||| ||||| ||||| |||||||||||   |||||| ||| ||| |||| |||| |||| | ||||||| | |||||||    
T  9093659 gataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacag 9093571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 5088823 - 5088931
Alignment:
Q  114 aaagtcaaattattttcatataagctatat----tttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtca 209  Q
    ||||||||||||||||||||||||||||||     ||||||| | | || ||| |||||| ||||| |||||||||| |||||||| | ||||||||| |    
T  5088823 aaagtcaaattattttcatataagctatatataagttgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacatgtta 5088922  T
Q  210 taaactgtt 218  Q
    |||||||||    
T  5088923 taaactgtt 5088931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 12361159 - 12361265
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||| |||||||||| |||||||||||||||||   |||||| ||| | |||   ||||| || ||||||||||||| |||||||| | |||||||    
T  12361159 gataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataagttgaaaacagcttatggacat 12361258  T
Q  206 gtcataa 212  Q
    |||||||    
T  12361259 gtcataa 12361265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 3537134 - 3537054
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttt--tataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||| |  |||| | ||||||||||| ||||||||||||||    
T  3537134 gataaaataaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatggaaataag 3537054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 6509406 - 6509273
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||||| | || ||||||||||||   |||||| ||| |||||| |||||| ||||| |||||||| | |||| ||  | | | |||    
T  6509406 gataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcat 6509307  T
Q  206 gtcataaactgttcctgtaagctct-tcaaacag 238  Q
    ||||||| ||||| || |||||||| ||||||||    
T  6509306 gtcataagctgtttctataagctctctcaaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 9836958 - 9836877
Alignment:
Q  105 tgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtt 186  Q
    ||||||| |||||||||| |||||||||||||| || |   |||||| ||| ||||||||||||| ||||||||||| ||||    
T  9836958 tgataaagtaaagtcaaactattttcatataagttacaacctgttttcataagctatcttggagagcttatggaaatgagtt 9836877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 28769441 - 28769337
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatg 206  Q
    ||||||| |||||||| ||||||| |||||||||||   |||||| ||| ||||| |||||||  ||||||||||||| | |||||| | | |||||||     
T  28769441 ataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacata 28769342  T
Q  207 tcata 211  Q
    |||||    
T  28769341 tcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 7918875 - 7918788
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacag 194  Q
    |||||||||||| ||||| ||||| | |||||||||  ||||||| ||| ||||||||| ||| ||| |||||||||| | |||||||    
T  7918875 ataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacag 7918788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 29973050 - 29973125
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    ||||||||||||||| |||||||| ||||||||||  ||||||| ||| |||||| | ||||  ||||||||||||    
T  29973050 taaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaataa 29973125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 6864562 - 6864484
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||| ||||||||| |||| ||||  ||||||| ||| ||||| ||||||| |||  |||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagcttgaggaaataag 6864484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 39551312 - 39551206
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||  ||| | | |||||| ||||||||  ||||||| ||| ||| || |||||| |||||  ||||||||| |||||||| | |||||||    
T  39551312 gataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacat 39551213  T
Q  206 gtcataa 212  Q
    |||||||    
T  39551212 gtcataa 39551206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 4558765 - 4558842
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataa 183  Q
    ||||||||||||| |||||||||||||||| ||||||   |||||  ||| |||||| | |||| |||||||||||||    
T  4558765 gataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataa 4558842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 29262977 - 29262944
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||||||||||||||||||||||||    
T  29262977 gataaaataaagtcaaattattttcatataagct 29262944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 43504758 - 43504807
Alignment:
Q  146 tgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||||| ||||||||||||| |||||||||||||| | ||||||||    
T  43504758 tgtttttataagctatcttggagaacttatggaaataagctgaaaacagc 43504807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 1470959 - 1470923
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1470959 gataaaataaagtcaaattactttcatataagctata 1470923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 13652191 - 13652271
Alignment:
Q  115 aagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||| ||||| |||||||||||| ||||  ||||||||||| |||||  |||||| |||| ||||||||||  ||||||||    
T  13652191 aagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataagtagaaaacagc 13652271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 13710834 - 13710914
Alignment:
Q  115 aagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||| ||||| |||||||||||| ||||  ||||||||||| |||||  |||||| |||| ||||||||||  ||||||||    
T  13710834 aagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataagtagaaaacagc 13710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 24558829 - 24558929
Alignment:
Q  115 aagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaac 214  Q
    |||| ||||||||||| |||||||||||  ||||||| ||| |||||||||||||  | ||| ||||||||| || | ||| | || || ||||||||||    
T  24558829 aagttaaattattttcgtataagctataagttgttttcataagctatcttggagacttaatgtaaataagttgaacatagcttatgaacgtgtcataaac 24558928  T
Q  215 t 215  Q
    |    
T  24558929 t 24558929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 34770859 - 34770915
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatc 162  Q
    ||||||||||||||||||| ||||||| |||||||||  ||||||| ||| ||||||    
T  34770859 gataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatc 34770915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 41336748 - 41336661
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||||| ||||||||| ||||||||||| ||| |  ||||||| ||| ||||||| ||||| |||  ||||||||| | ||||||    
T  41336748 gataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaaca 41336661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 42597456 - 42597511
Alignment:
Q  157 gctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    ||||||||||| | |||||||||||||||| |||||||| | | ||||||||||||    
T  42597456 gctatcttggataacttatggaaataagttgaaaacagcttatagacatgtcataa 42597511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 7878587 - 7878553
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctata 7878553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 20672757 - 20672823
Alignment:
Q  146 tgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||||||||| |||||| |||||| |||||| ||||||| | |||||||| | || |||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataa 20672823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 41620394 - 41620288
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||||||| ||||||||  ||| |   |||||||||| |||||||||  || ||| || |||||||   |||||| | | |||||||    
T  41620394 gataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagcttttgaaaataagcggaaaacaacttatggacat 41620295  T
Q  206 gtcataa 212  Q
    |||||||    
T  41620294 gtcataa 41620288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 11795064 - 11795165
Alignment:
Q  111 aataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcat 210  Q
    |||||||||| | | |||||||||||| ||||   || ||| ||| |||||  |||||| |||||||||||||| | |||||||  | ||||||||||||    
T  11795064 aataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcat 11795163  T
Q  211 aa 212  Q
    ||    
T  11795164 aa 11795165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 787209 - 787173
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| || ||||||||||||||    
T  787209 gataaaataaagtcaaattgttatcatataagctata 787173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 9834889 - 9834833
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttg 165  Q
    ||||||||  |||||| |||||||||||||||||  ||||||| ||| |||||||||    
T  9834889 aaaataaaaccaaattgttttcatataagctataagttgttttcataagctatcttg 9834833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 11376670 - 11376706
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  11376670 gataaaataaagtctaattattttgatataagctata 11376706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 25869327 - 25869263
Alignment:
Q  148 tttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    |||| |||||||||| ||||||  ||||||||||||| | |||||| | | ||||||||||||||    
T  25869327 ttttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataa 25869263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 35374476 - 35374440
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  35374476 gataaaataaagttaaattgttttcatataagctata 35374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 42215409 - 42215297
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | ||||  ||||| |||||   | |||| ||| |||||| |||||| |||||| ||||||| | |||||||| | || |||     
T  42215409 gataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaa 42215310  T
Q  206 gtcataaactgtt 218  Q
    ||||||| |||||    
T  42215309 gtcataagctgtt 42215297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 42237525 - 42237489
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  42237525 gataaaataaagttaaattgttttcatataagctata 42237489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 37273103 - 37273207
Alignment:
Q  111 aataaagtcaaattattttcatataagctatattt---tgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 207  Q
    |||||||||||||| |||| ||||||| |||| |    |||||| ||| ||||||||||||| |||||||||||||||| |||||| | | |||||||||    
T  37273103 aataaagtcaaattgtttttatataagatataataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgt 37273202  T
Q  208 cataa 212  Q
    |||||    
T  37273203 cataa 37273207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 21367637 - 21367747
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggac-atgt 207  Q
    |||||||||| ||||| ||||| |||||  ||||  ||||||| ||| ||||||||||||| |||||| ||||||| | |||||||| |||| || ||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgt 21367736  T
Q  208 cataaactgtt 218  Q
    ||||| |||||    
T  21367737 cataagctgtt 21367747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 21574458 - 21574563
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||| ||||| ||| |||||||||||||  || |||||||| |||| | |||||| |||||||||||||| | ||| |||| | || ||||    
T  21574458 gataaaataaagttaaattgtttacatataagctataactt-tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacat 21574556  T
Q  206 gtcataa 212  Q
    |||||||    
T  21574557 gtcataa 21574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 50952314 - 50952412
Alignment:
Q  121 aattattttcatataagctatatt-ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||| ||||||||||||||||||  ||||| | |||  |||||||||||| |||||||||||||| |||||||||  | || ||||||||||| |||||    
T  50952314 aattgttttcatataagctatatagttgttgtaataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgtt 50952412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 20192709 - 20192585
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||||||||||   ||||||||||| |||||   ||||||| ||   |||   ||||| ||||||||||| |||| |||||||| | |||||||    
T  20192709 gataaaataaagtcaaacagttttcatataatctataagctgtttttgtaacttattcgggagagcttatggaaatgagttgaaaacagcttatggacat 20192610  T
Q  206 gtcataaactgttcctgtaagctct 230  Q
    ||||||| ||||| || ||||||||    
T  20192609 gtcataagctgtttctataagctct 20192585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 36139845 - 36139957
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| |  |||| |||||||||||  ||||||   ||  |||||||| ||| |||||| ||||||| | |||||||| |||| ||||    
T  36139845 gataaaataaagtcaaactgatttcgtataagctataagttgtttcattatactatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacat 36139944  T
Q  206 gtcataaactgtt 218  Q
    ||||||| |||||    
T  36139945 gtcataagctgtt 36139957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 1395638 - 1395673
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctat 141  Q
    ||||||||||||||||||||||||||||||||||||    
T  1395638 gataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 19679430 - 19679368
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggaga 169  Q
    |||||||||||||||| | ||||| |||||||||||  |||||||||||  ||||||||||||    
T  19679430 ataaaataaagtcaaactgttttcttataagctataagttgtttttataaactatcttggaga 19679368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 24085442 - 24085352
Alignment:
Q  106 gataaaataaagtcaaattatttt-catataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    ||||||||||||| || || |||| || |||||||||| ||||||||| || ||||||||||||| ||| || ||||||| | ||||||||    
T  24085442 gataaaataaagtgaatttgtttttcacataagctataatttgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagc 24085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 36646485 - 36646379
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||||||||  |||| |||||||||||| ||||  ||||||| ||| |||||| | ||||  |||| |||||||| | |||||||| | |||||||    
T  36646485 gataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacat 36646386  T
Q  206 gtcataa 212  Q
    | |||||    
T  36646385 gccataa 36646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 45541552 - 45541650
Alignment:
Q  120 aaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    ||||||||||| ||||||||||| ||| |||| ||| ||||||||||| | ||||||  |||||  | |||||||| | || ||||||||||| |||||    
T  45541552 aaattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgtt 45541650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 901907 - 901976
Alignment:
Q  122 attattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaa 191  Q
    |||||||| ||||| | |||| |||||||||||| ||||| ||||||| |||||| ||||||||| ||||    
T  901907 attatttttatatatgttatactttgtttttataagctatattggagaacttatgaaaataagttgaaaa 901976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 32555084 - 32555039
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttt 151  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||    
T  32555084 gataaaataaagtcaaattattttcctataagctataagttgtttt 32555039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 2318611 - 2318699
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggcta-tcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||||| || ||||||| ||||||||||| |||||  ||||||||||| | || ||||||||| ||||| |||||||| | ||||||    
T  2318611 gataaaatcaaatcaaattgttttcatataaactataagttgtttttataagttattcttggagagcttatagaaataagctgaaaaca 2318699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 24887386 - 24887298
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacag 194  Q
    ||||||||||||||||| | | ||||||||||||| |   |||||| ||| |||||| |||||| ||||||| |||||| | |||||||    
T  24887386 gataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacag 24887298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 32703065 - 32703141
Alignment:
Q  61 tcatataaatgcttatgtataatctatttcaatttctataatattgataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||| |||||||||| ||||||| |||   |||| |  ||||||||||| ||||||| |||||||||||||||||    
T  32703065 tcatataaatgtttatgtataagctatttctatt---ataaaa--gataaaataaactcaaattgttttcatataagctata 32703141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 1217900 - 1217777
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtc 208  Q
    ||||| |||| ||||| ||||||| |||| ||||   |||||| ||| |||||| | |||| |||||| || |||| | |||||| | | ||||||||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtc 1217801  T
Q  209 ataaactgttcctgtaagctcttc 232  Q
    |||| ||||| | |||||||||||    
T  1217800 ataagctgtttccgtaagctcttc 1217777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 24235786 - 24235680
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||| ||||||||||| |||||  ||||||||||||  ||||||| ||| ||||| |||| ||  || || ||||||| | ||||||||||  ||||||    
T  24235786 gataatataaagtcaaactatttgaatataagctataagttgttttcataagctatattgg-gacgttgtgtaaataagctgaaaacagcataaggacat 24235688  T
Q  206 gtcataaa 213  Q
    ||||||||    
T  24235687 gtcataaa 24235680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 51510289 - 51510218
Alignment:
Q  113 taaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||| |||||||||| |||||| |||||  ||||||| ||| | |||| |||||| ||||||||||||||    
T  51510289 taaagtaaaattattttgatataaactataagttgttttcataagttatcgtggagagcttatggaaataag 51510218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 52323960 - 52323890
Alignment:
Q  145 ttgtttttataggctatcttggagatcttatg--gaaataagtttaaaacagcatgtggacatgtcataaa 213  Q
    ||||||| ||| ||||||||||||| ||||||  |||||||||| |||||||| | ||||| |||||||||    
T  52323960 ttgttttgataagctatcttggagagcttatgtggaaataagttgaaaacagcttatggacgtgtcataaa 52323890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 28779327 - 28779369
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgttttt 152  Q
    ||||||||||||| |||||||||||||||||||  ||||||||    
T  28779327 aaataaagtcaaactattttcatataagctataagttgttttt 28779369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 44374747 - 44374642
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||||| |||||||| || ||| | |||||||   || | ||||||||||| || ||||||||||| | |||| ||| | || ||||    
T  44374747 gataaaataaagtcaaattgttttcatacaatctaaaatttgtttcg-taagatatcttggagagctaatggaaataaggtgaaaatagcttatgtacat 44374649  T
Q  206 gtcataa 212  Q
    |||||||    
T  44374648 gtcataa 44374642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 14548804 - 14548735
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||||||||||||  ||||||| ||| | |||  |||||| |||||||||||||| | ||||||||    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagc 14548735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 21872374 - 21872313
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttgga 167  Q
    |||||||||| |||||||| |||| ||||||||||||  ||||||| ||| |||||| ||||    
T  21872374 gataaaataaggtcaaatttttttgatataagctataagttgttttcataagctatcctgga 21872313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 52618969 - 52619082
Alignment:
Q  105 tgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggaca 204  Q
    |||| ||||||||| ||||| |||||||||||| ||||   |||||| | | ||||||||| ||| ||| || ||||||| | |||| ||| | || |||    
T  52618969 tgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaaca 52619068  T
Q  205 tgtcataaactgtt 218  Q
    ||||||||| ||||    
T  52619069 tgtcataaattgtt 52619082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 23315593 - 23315629
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  23315593 gataaaataaagtcaaattgttttcatataggctata 23315629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 23785222 - 23785334
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | | |||||||||||||||   |||||| | | ||| || |||||| |||||||||| ||| | |||||| | | ||||||     
T  23785222 gataaaataaagtcaaactgtattcatataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaacaacttatggacac 23785321  T
Q  206 gtcataaactgtt 218  Q
    | ||||| |||||    
T  23785322 gccataagctgtt 23785334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 25195391 - 25195419
Alignment:
Q  106 gataaaataaagtcaaattattttcatat 134  Q
    |||||||||||||||||||||||||||||    
T  25195391 gataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 30956729 - 30956653
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaata 182  Q
    ||||||||||||| ||||| ||||  |||| ||||||  ||||||| | | ||||||||||||| ||||||| ||||    
T  30956729 gataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatgggaata 30956653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 30972541 - 30972465
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaata 182  Q
    ||||||||||||| ||||| ||||  |||| ||||||  ||||||| | | ||||||||||||| ||||||| ||||    
T  30972541 gataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatgggaata 30972465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 32069103 - 32069194
Alignment:
Q  92 atttctataatattgataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||| |  ||||||||||||||||| || ||||||| |||||||    |||||| ||| |||||||||||||  ||||| |||||||    
T  32069103 atttctataaaaaagataaaataaagtcaaa-taatttcataaaagctatcaactgttttaataagctatcttggagagattatgaaaataag 32069194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 33405268 - 33405200
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatg 176  Q
    ||||||||||| || || |||||||||||||||||   |||||| ||| ||||||||| ||| ||||||    
T  33405268 taaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatg 33405200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 36101535 - 36101647
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| |  |||| ||||| |||||  ||||||   ||  ||||| || ||| |||||| ||||||| | |||||||| |||| ||||    
T  36101535 gataaaataaagtcaaactgatttcgtataatctataagttgtttcattatactatcctgaagagcttatgaaaataagctgaaaacagcttgtgaacat 36101634  T
Q  206 gtcataaactgtt 218  Q
    ||||||| |||||    
T  36101635 gtcataagctgtt 36101647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 37689487 - 37689451
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    |||||| |||||| |||||||||||||||||||||||    
T  37689487 gataaagtaaagttaaattattttcatataagctata 37689451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 40122855 - 40122800
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatc 162  Q
    ||||||||||||||||| | |||||||| ||||||||  ||||||||||| ||||||    
T  40122855 gataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatc 40122800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 38047958 - 38047886
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatgga 178  Q
    ||||||||||||||||||||||||||||||  ||||||  |||||| ||| |||||| |||||| ||||||||    
T  38047958 gataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatgga 38047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 12425538 - 12425625
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||||||||||| ||||| ||||| |||||||||||   |||||| | | ||||||||||||| |||||| ||||||||| ||||||    
T  12425538 gataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaaca 12425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 12975315 - 12975400
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||||||| ||||||| |||||||||||||||||   ||| || ||| ||||||||||||| ||||||| |||||||| ||||||    
T  12975315 ataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttatgg-aataagttgaaaaca 12975400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 10272534 - 10272447
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    |||||||| |||||||||| ||||| |||||||||||  ||||||| ||| || ||||||||||  ||||| ||||||| | ||||||    
T  10272534 gataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaaca 10272447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 34205206 - 34205265
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttg 165  Q
    |||||| ||||||||||||||||| ||||||||||||  ||||||| ||| |||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttgttttcataagctatcttg 34205265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 41957551 - 41957428
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtc 208  Q
    ||||| |||| ||||| ||||||| |||| ||||   |||||| ||| |||||| | |||| |||||| ||||||| | |||||| | | ||||||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtc 41957452  T
Q  209 ataaactgttcctgtaagctcttc 232  Q
    |||| ||||| | |||||||||||    
T  41957451 ataagctgtttccgtaagctcttc 41957428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 912751 - 912677
Alignment:
Q  107 ataaaataaagtcaaa-ttattttcatataagctatattttgtttttataggctatcttggagatcttatggaaa 180  Q
    |||||||||||||||| || ||||||||||||| |||  |||||||||||  |||||||||| | ||||||||||    
T  912751 ataaaataaagtcaaaattgttttcatataagcaataagttgtttttataaactatcttggaaagcttatggaaa 912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 26516367 - 26516445
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||| || ||||||||||| ||||   |||||| ||| ||||||| | |||| |||||||||||||    
T  26516367 gataaaataaagtcaaactactttcatataagttataaactgttttcataagctatctagcagattttatggaaataag 26516445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 39105435 - 39105509
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||| |||| ||||| ||||| ||||||||||| | |||||| ||| ||||||||||||| |||||| |||||||    
T  39105435 aaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataag 39105509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 4273477 - 4273368
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtc 208  Q
    |||||||||||||||| |||| | |||||||||| | |||||||| | | |||||| |||| ||||| | |||||||| |||||| | | | |||| |||    
T  4273477 aaaataaagtcaaattgttttaaaataagctataatctgtttttacacggtatctttgagagcttatagcaataagttgaaaacaacttatagacaagtc 4273378  T
Q  209 ataaactgtt 218  Q
    |||| |||||    
T  4273377 ataagctgtt 4273368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 14295473 - 14295585
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||||| | |||||||||||||||||   ||||||  || |||||| |||||| ||| | ||| |||| | |||||||| | | |||||    
T  14295473 gataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacat 14295572  T
Q  206 gtcataaactgtt 218  Q
     |||||| |||||    
T  14295573 atcataagctgtt 14295585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 35135765 - 35135729
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35135765 gataaaataaagtcaaactattttcatataagctata 35135729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 17368682 - 17368749
Alignment:
Q  145 ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataa 212  Q
    ||||||| ||| |||||||||||||  ||||||||||||| | ||||| |||| || |||||||||||    
T  17368682 ttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataa 17368749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 26005080 - 26005013
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 193  Q
    ||||| ||||||||||||  |||||| ||| |||| |||||||| |||||||||||||| | ||||||    
T  26005080 ttttcgtataagctatatactgttttcataagctagcttggagagcttatggaaataaggtgaaaaca 26005013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 32969220 - 32969185
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctat 141  Q
    |||||||||||||||||||||||| |||||||||||    
T  32969220 gataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 34690841 - 34690943
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    ||||||||||||||| | || ||||||||| ||||||  ||||| | ||| || |||||||||| |||||||||||||||  | |||| | | |||||||    
T  34690841 gataaaataaagtcacaatactttcatata-gctataagttgttctcataagccatcttggagagcttatggaaataagtcgataacaacttatggacat 34690939  T
Q  206 gtca 209  Q
    ||||    
T  34690940 gtca 34690943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 9202851 - 9202773
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||| ||||| ||||||||||||| |||   |||||| ||| | ||||||| ||| |||||| |||||||    
T  9202851 gataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataag 9202773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 10391331 - 10391421
Alignment:
Q  129 tcatataagctatattttgtttttataggctatcttggaga-tcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    |||||||||||||| |||||||||||| |||||| | |||| | ||| ||||||||||| |||||| |   | ||||||||||||| ||||    
T  10391331 tcatataagctataatttgtttttataagctatcctagagagttttaaggaaataagttgaaaacaactaatagacatgtcataaagtgtt 10391421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 18875331 - 18875437
Alignment:
Q  109 aaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtc 208  Q
    ||||||||||||||||  ||||||| ||| ||||   |||||| ||| | |||| |||||| |||||||||| ||||| |||||| | | ||| |||| |    
T  18875331 aaaataaagtcaaattgatttcatacaagttataagctgttttaataagatatcctggagagcttatggaaacaagttgaaaacaacttatgggcatgcc 18875430  T
Q  209 ataaact 215  Q
    |||||||    
T  18875431 ataaact 18875437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 32172620 - 32172726
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacat 205  Q
    |||||||| ||||||| || ||| |||||||||||||   |||||| ||| |||||| || ||| || ||||||||||| | ||||  || | |||||||    
T  32172620 gataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacat 32172719  T
Q  206 gtcataa 212  Q
    |||||||    
T  32172720 gtcataa 32172726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 33533591 - 33533533
Alignment:
Q  157 gctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaact 215  Q
    ||||||||||||| |||||||||||||||| |||||| | | || | ||||||||||||    
T  33533591 gctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataaact 33533533  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 35550916 - 35550993
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||||||||||||||| |||||||||||||| |||||   ||||||||||  ||||| |||||| || ||||| |||||    
T  35550916 gataaaataaagtcaa-ttattttcatataaactataagctgtttttataacctatcctggagaactaatggagataag 35550993  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 35553287 - 35553213
Alignment:
Q  110 aaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    |||| |||||||||| |||||||||||||||||   | |||| ||| |||||  |||||| ||||||||||||||    
T  35553287 aaattaagtcaaattcttttcatataagctataaactattttcatacgctattctggagagcttatggaaataag 35553213  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 3951584 - 3951645
Alignment:
Q  108 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggaga 169  Q
    |||||| || ||||||||||||||||| |||||||   |||||||||| |||||| ||||||    
T  3951584 taaaatgaaatcaaattattttcatattagctataagctgtttttataagctatcctggaga 3951645  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 8158404 - 8158371
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagct 139  Q
    ||||||||||||| ||||||||||||||||||||    
T  8158404 gataaaataaagttaaattattttcatataagct 8158371  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 31723824 - 31723897
Alignment:
Q  158 ctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgttcctgtaagctctt 231  Q
    |||||||||||| |||| ||||| ||| |||||||||| | |||||||| || || ||||||  ||||||||||    
T  31723824 ctatcttggagaccttacggaaaaaagcttaaaacagcttatggacatgacacaagctgttcgcgtaagctctt 31723897  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 32408682 - 32408617
Alignment:
Q  119 caaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||||||||||||||||||||   | |||| ||| |||||| || ||| ||||||||||||||    
T  32408682 caaattattttcatataagctataaactattttcataagctatcctgaagagcttatggaaataag 32408617  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 36539713 - 36539762
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttata 155  Q
    ||||||||||||||||  | |||||||||||||||||  |||||||||||    
T  36539713 gataaaataaagtcaacctgttttcatataagctataagttgtttttata 36539762  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 37588443 - 37588374
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagc 195  Q
    |||||||||||||||||  ||||||| ||| | |||  |||||| |||||||||||||| | ||||||||    
T  37588443 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagc 37588374  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 41277453 - 41277392
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttgga 167  Q
    ||||||||||||||||| | |||||||||||| || |  ||||||| ||| |||||||||||    
T  41277453 gataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatcttgga 41277392  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 583876 - 583840
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| | |||||||||||||||||    
T  583876 gataaaataaagtcaaactgttttcatataagctata 583840  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 7319379 - 7319451
Alignment:
Q  112 ataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataag 184  Q
    ||||||| ||||| |||||||||||||||||   ||||||  || ||||||||||||| |||||  |||||||    
T  7319379 ataaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataag 7319451  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 13604932 - 13604840
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    ||||||||||| || ||   |||||| ||| | ||||||| ||| |||||| ||||||||| |||||| | | |||||||||||||| |||||    
T  13604932 ttttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgtt 13604840  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 21768280 - 21768188
Alignment:
Q  126 ttttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 218  Q
    ||||||||||| || ||   |||||| ||| | ||||||| ||| |||| | ||||||||| |||||||| | |||||||||||||| |||||    
T  21768280 ttttcatataaactttaagctgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataagctgtt 21768188  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 32059692 - 32059656
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| | |||||||||||||||||    
T  32059692 gataaaataaagtcaaactgttttcatataagctata 32059656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 37611279 - 37611215
Alignment:
Q  145 ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtca 209  Q
    ||||||| ||| ||||||||||||| |||||||||||||  | |||||||| | || ||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtca 37611215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 37788009 - 37787945
Alignment:
Q  145 ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtca 209  Q
    ||||||| ||| ||||||||||||| |||||||||||||  | |||||||| | || ||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtca 37787945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 39750110 - 39750146
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctata 142  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  39750110 gataaaataaagtcaaactattttcatataagttata 39750146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 27543 - 27603
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttgg 166  Q
    ||||||||||||||||||| ||||||||||| |||||  ||||||| |||  |||||||||    
T  27543 gataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttgg 27603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 6600 - 6565
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||||| |||||||||||||||||||    
T  6600 ataaaataaagtcaaactattttcatataagctata 6565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 13620 - 13585
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagctata 142  Q
    |||||||||||||||| |||||||||||||||||||    
T  13620 ataaaataaagtcaaactattttcatataagctata 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 138
Target Start/End: Complemental strand, 69045 - 69014
Alignment:
Q  107 ataaaataaagtcaaattattttcatataagc 138  Q
    ||||||||||||||||||||||||||||||||    
T  69045 ataaaataaagtcaaattattttcatataagc 69014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 18470 - 18436
Alignment:
Q  106 gataaaataaagtcaaattattttcatataagcta 140  Q
    ||||||||||||||||||| |||||||||||||||    
T  18470 gataaaataaagtcaaattcttttcatataagcta 18436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 134
Target Start/End: Complemental strand, 34100 - 34072
Alignment:
Q  106 gataaaataaagtcaaattattttcatat 134  Q
    |||||||||||||||||||||||||||||    
T  34100 gataaaataaagtcaaattattttcatat 34072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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