View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2729_low_22 (Length: 521)

Name: NF2729_low_22
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2729_low_22
NF2729_low_22
[»] chr7 (54 HSPs)
chr7 (11-235)||(40298846-40299072)
chr7 (15-232)||(19920206-19920423)
chr7 (8-228)||(5723009-5723223)
chr7 (2-235)||(42259459-42259702)
chr7 (11-232)||(33845344-33845563)
chr7 (11-235)||(3680843-3681077)
chr7 (14-235)||(17869236-17869468)
chr7 (11-232)||(30833014-30833245)
chr7 (105-222)||(34002155-34002274)
chr7 (105-235)||(41905957-41906088)
chr7 (13-172)||(48838601-48838774)
chr7 (9-156)||(33056201-33056358)
chr7 (11-235)||(6521817-6522053)
chr7 (8-235)||(18733452-18733671)
chr7 (112-235)||(19906413-19906538)
chr7 (368-426)||(19920857-19920915)
chr7 (109-235)||(1103483-1103611)
chr7 (1-215)||(10684738-10684965)
chr7 (105-235)||(26963478-26963612)
chr7 (105-235)||(31416772-31416906)
chr7 (105-235)||(36447091-36447225)
chr7 (121-228)||(42044016-42044127)
chr7 (267-369)||(19920466-19920564)
chr7 (105-235)||(32345856-32345990)
chr7 (46-173)||(34733374-34733508)
chr7 (104-235)||(30514972-30515107)
chr7 (19-99)||(42121688-42121768)
chr7 (418-499)||(19921345-19921424)
chr7 (112-235)||(36836058-36836184)
chr7 (64-232)||(26527370-26527548)
chr7 (186-235)||(28044236-28044286)
chr7 (105-228)||(39117510-39117636)
chr7 (11-99)||(32275341-32275429)
chr7 (105-156)||(36447633-36447684)
chr7 (186-232)||(40805026-40805073)
chr7 (8-55)||(45948544-45948591)
chr7 (186-235)||(18886668-18886718)
chr7 (186-235)||(22597229-22597279)
chr7 (8-57)||(40339646-40339695)
chr7 (105-153)||(28044163-28044211)
chr7 (105-156)||(18886725-18886776)
chr7 (105-156)||(42010597-42010648)
chr7 (1-72)||(45933496-45933567)
chr7 (8-66)||(7795157-7795215)
chr7 (11-61)||(10599547-10599597)
chr7 (13-99)||(22597303-22597388)
chr7 (186-235)||(32873268-32873318)
chr7 (11-61)||(37815908-37815958)
chr7 (186-235)||(43813449-43813499)
chr7 (145-228)||(19288410-19288495)
chr7 (52-156)||(22627314-22627427)
chr7 (13-66)||(29530854-29530907)
chr7 (1-61)||(36446978-36447038)
chr7 (1-61)||(44453317-44453377)
[»] scaffold0189 (1 HSPs)
scaffold0189 (13-235)||(12989-13213)
[»] chr4 (73 HSPs)
chr4 (8-232)||(31987302-31987528)
chr4 (11-235)||(54091953-54092179)
chr4 (11-222)||(30492736-30492950)
chr4 (11-235)||(29840070-29840285)
chr4 (8-235)||(34096010-34096249)
chr4 (14-232)||(45049707-45049926)
chr4 (11-235)||(47321139-47321377)
chr4 (8-216)||(42672404-42672622)
chr4 (11-156)||(38692466-38692611)
chr4 (11-235)||(17499637-17499874)
chr4 (57-235)||(37445655-37445844)
chr4 (15-235)||(30022063-30022293)
chr4 (105-235)||(31941553-31941687)
chr4 (8-99)||(32140795-32140886)
chr4 (8-235)||(22212336-22212574)
chr4 (109-235)||(6510113-6510241)
chr4 (105-235)||(19849079-19849211)
chr4 (105-232)||(45520483-45520611)
chr4 (105-227)||(44855245-44855371)
chr4 (105-235)||(34124290-34124424)
chr4 (8-156)||(34360081-34360238)
chr4 (14-99)||(36805376-36805460)
chr4 (105-228)||(28116247-28116374)
chr4 (15-99)||(51737248-51737332)
chr4 (105-235)||(24259606-24259740)
chr4 (52-228)||(11835109-11835293)
chr4 (145-235)||(19282474-19282567)
chr4 (130-222)||(17317892-17317987)
chr4 (109-232)||(29289920-29290044)
chr4 (105-235)||(35928486-35928616)
chr4 (9-72)||(29519446-29519509)
chr4 (105-235)||(45889559-45889692)
chr4 (11-66)||(50623263-50623318)
chr4 (2-99)||(56556192-56556286)
chr4 (111-233)||(38761857-38761978)
chr4 (121-232)||(3093351-3093460)
chr4 (105-156)||(21045209-21045260)
chr4 (105-235)||(51434280-51434414)
chr4 (13-235)||(52732594-52732819)
chr4 (105-235)||(4408200-4408335)
chr4 (46-99)||(32140943-32140996)
chr4 (8-61)||(40010792-40010845)
chr4 (45-153)||(43421080-43421197)
chr4 (9-156)||(54512099-54512255)
chr4 (181-235)||(6232136-6232191)
chr4 (105-156)||(51930652-51930703)
chr4 (186-235)||(21045151-21045201)
chr4 (11-57)||(38991686-38991732)
chr4 (186-235)||(50072276-50072326)
chr4 (1-62)||(2728311-2728372)
chr4 (11-72)||(42605745-42605806)
chr4 (1-50)||(54042095-54042144)
chr4 (10-66)||(45889740-45889796)
chr4 (118-228)||(45903443-45903555)
chr4 (109-156)||(31817229-31817276)
chr4 (11-66)||(37654589-37654644)
chr4 (105-156)||(39671131-39671182)
chr4 (14-61)||(45043514-45043561)
chr4 (15-66)||(49089642-49089693)
chr4 (3-66)||(53814412-53814475)
chr4 (8-66)||(2493281-2493339)
chr4 (186-235)||(15501252-15501302)
chr4 (201-235)||(38692409-38692443)
chr4 (186-235)||(56556360-56556410)
chr4 (9-38)||(620347-620376)
chr4 (198-235)||(28653074-28653111)
chr4 (105-150)||(54233900-54233945)
chr4 (1-66)||(55126674-55126739)
chr4 (150-235)||(6462004-6462094)
chr4 (9-61)||(27653858-27653910)
chr4 (1-37)||(38510169-38510205)
chr4 (112-156)||(50072333-50072377)
chr4 (11-99)||(56422921-56423009)
[»] chr3 (84 HSPs)
chr3 (11-235)||(4391903-4392129)
chr3 (8-235)||(15514651-15514880)
chr3 (9-226)||(35099292-35099511)
chr3 (24-235)||(83295-83516)
chr3 (3-156)||(16240656-16240809)
chr3 (64-235)||(3000751-3000924)
chr3 (28-235)||(36310198-36310404)
chr3 (3-235)||(44854314-44854555)
chr3 (10-235)||(46362928-46363165)
chr3 (14-214)||(647514-647725)
chr3 (11-99)||(31290893-31290981)
chr3 (105-235)||(2988630-2988763)
chr3 (105-235)||(37225617-37225749)
chr3 (15-234)||(27483116-27483337)
chr3 (12-235)||(43580474-43580712)
chr3 (115-235)||(50420258-50420379)
chr3 (11-99)||(42857010-42857098)
chr3 (46-234)||(38457460-38457659)
chr3 (8-235)||(2567928-2568157)
chr3 (45-235)||(5244585-5244784)
chr3 (1-235)||(26965417-26965653)
chr3 (11-99)||(44648329-44648417)
chr3 (11-235)||(53560664-53560900)
chr3 (8-99)||(25061839-25061930)
chr3 (2-98)||(4476272-4476368)
chr3 (2-98)||(42740369-42740465)
chr3 (105-235)||(32303925-32304059)
chr3 (105-228)||(43687903-43688033)
chr3 (2-235)||(54933113-54933359)
chr3 (10-99)||(43599466-43599555)
chr3 (109-228)||(43600218-43600337)
chr3 (11-235)||(20512413-20512651)
chr3 (130-235)||(22730924-22731031)
chr3 (11-156)||(40048956-40049108)
chr3 (105-235)||(43169333-43169467)
chr3 (45-235)||(36771529-36771721)
chr3 (18-99)||(38165587-38165668)
chr3 (109-235)||(27027732-27027860)
chr3 (106-228)||(25722482-25722608)
chr3 (8-99)||(42791442-42791533)
chr3 (105-235)||(19552539-19552662)
chr3 (109-235)||(51381720-51381853)
chr3 (52-228)||(22414761-22414946)
chr3 (47-153)||(2662447-2662562)
chr3 (105-232)||(42007082-42007212)
chr3 (8-99)||(43736787-43736877)
chr3 (105-235)||(54261414-54261548)
chr3 (29-232)||(1340866-1341071)
chr3 (105-235)||(34059875-34059996)
chr3 (108-228)||(44645344-44645468)
chr3 (68-232)||(41287078-41287255)
chr3 (11-159)||(790149-790306)
chr3 (169-232)||(4476437-4476502)
chr3 (109-235)||(27039326-27039454)
chr3 (186-232)||(45095555-45095602)
chr3 (105-235)||(49470788-49470922)
chr3 (8-156)||(53716085-53716241)
chr3 (112-228)||(36541497-36541617)
chr3 (11-103)||(45095671-45095764)
chr3 (8-56)||(13756790-13756838)
chr3 (8-72)||(51381899-51381963)
chr3 (14-66)||(51482115-51482167)
chr3 (105-156)||(35239441-35239492)
chr3 (15-66)||(38277931-38277982)
chr3 (19-66)||(43169515-43169562)
chr3 (11-66)||(47895260-47895315)
chr3 (186-235)||(790095-790145)
chr3 (11-49)||(43687800-43687838)
chr3 (186-235)||(44648505-44648555)
chr3 (11-61)||(44676405-44676455)
chr3 (8-41)||(30186332-30186365)
chr3 (169-232)||(42740234-42740299)
chr3 (186-234)||(53716029-53716078)
chr3 (14-66)||(3152726-3152778)
chr3 (44-104)||(6084779-6084839)
chr3 (173-235)||(25061703-25061767)
chr3 (20-99)||(27027883-27027960)
chr3 (11-47)||(30186373-30186409)
chr3 (14-66)||(33193950-33194002)
chr3 (2-66)||(35557660-35557724)
chr3 (11-59)||(41287412-41287460)
chr3 (108-156)||(43599855-43599903)
chr3 (10-66)||(44645520-44645576)
chr3 (1-37)||(51397961-51397997)
[»] chr6 (29 HSPs)
chr6 (11-235)||(30627089-30627315)
chr6 (27-235)||(8052343-8052552)
chr6 (11-235)||(31275560-31275796)
chr6 (19-235)||(12828608-12828835)
chr6 (45-235)||(29915539-29915742)
chr6 (64-235)||(29927205-29927388)
chr6 (109-221)||(11785129-11785242)
chr6 (105-228)||(26669120-26669245)
chr6 (105-235)||(4123878-4124009)
chr6 (145-235)||(6140598-6140689)
chr6 (8-235)||(25932626-25932867)
chr6 (150-235)||(4132042-4132129)
chr6 (105-235)||(17345156-17345290)
chr6 (148-235)||(30626867-30626956)
chr6 (11-235)||(34439327-34439567)
chr6 (117-235)||(32258720-32258842)
chr6 (106-235)||(34576542-34576675)
chr6 (105-234)||(23936606-23936735)
chr6 (145-235)||(6143082-6143174)
chr6 (109-235)||(10494788-10494916)
chr6 (105-235)||(1924696-1924818)
chr6 (145-228)||(3015921-3016003)
chr6 (117-235)||(19689870-19689988)
chr6 (184-235)||(10520742-10520794)
chr6 (1-72)||(24163622-24163694)
chr6 (9-57)||(34513575-34513623)
chr6 (109-235)||(26189506-26189636)
chr6 (2-61)||(29713316-29713375)
chr6 (64-104)||(19689819-19689859)
[»] chr5 (56 HSPs)
chr5 (9-235)||(38982071-38982299)
chr5 (1-235)||(4371362-4371594)
chr5 (18-235)||(13066712-13066931)
chr5 (18-235)||(12992063-12992280)
chr5 (11-235)||(166568-166803)
chr5 (105-235)||(34171163-34171294)
chr5 (14-235)||(4742188-4742421)
chr5 (14-235)||(4751452-4751685)
chr5 (14-235)||(36660426-36660656)
chr5 (76-232)||(28640084-28640241)
chr5 (11-231)||(15400174-15400406)
chr5 (11-160)||(8960954-8961111)
chr5 (105-228)||(32690753-32690878)
chr5 (109-235)||(27810345-27810473)
chr5 (112-235)||(33585002-33585129)
chr5 (105-228)||(33822523-33822650)
chr5 (11-228)||(36783361-36783589)
chr5 (11-103)||(24436459-24436551)
chr5 (2-98)||(33693877-33693973)
chr5 (3-156)||(41566864-41567016)
chr5 (105-235)||(793626-793760)
chr5 (109-235)||(4833657-4833787)
chr5 (64-235)||(39059805-39059986)
chr5 (11-99)||(12167529-12167617)
chr5 (11-99)||(43257780-43257867)
chr5 (105-235)||(42329566-42329700)
chr5 (15-99)||(16886215-16886299)
chr5 (9-196)||(27652236-27652433)
chr5 (105-235)||(31557363-31557489)
chr5 (105-228)||(29653534-29653661)
chr5 (11-66)||(6519156-6519211)
chr5 (105-156)||(31889799-31889850)
chr5 (19-99)||(34919881-34919961)
chr5 (186-235)||(31889741-31889791)
chr5 (194-235)||(7388294-7388335)
chr5 (1-66)||(26660933-26660998)
chr5 (1-66)||(26932526-26932591)
chr5 (169-232)||(33693742-33693807)
chr5 (105-235)||(33741464-33741596)
chr5 (1-66)||(39504904-39504969)
chr5 (1-140)||(14979960-14980108)
chr5 (13-61)||(39730130-39730178)
chr5 (105-156)||(4011682-4011733)
chr5 (185-235)||(14980142-14980193)
chr5 (105-191)||(29044764-29044851)
chr5 (148-235)||(32963074-32963161)
chr5 (11-62)||(39335122-39335173)
chr5 (186-228)||(41845386-41845429)
chr5 (186-235)||(7731697-7731747)
chr5 (15-61)||(8336330-8336376)
chr5 (197-235)||(12167698-12167736)
chr5 (2-36)||(39335333-39335367)
chr5 (11-41)||(39804211-39804241)
chr5 (44-93)||(1513131-1513180)
chr5 (11-99)||(4967410-4967498)
chr5 (1-37)||(43584296-43584332)
[»] chr8 (55 HSPs)
chr8 (8-232)||(8382403-8382629)
chr8 (15-235)||(39970323-39970545)
chr8 (15-233)||(3095437-3095656)
chr8 (9-228)||(32326642-32326873)
chr8 (32-228)||(32661310-32661508)
chr8 (15-155)||(156309-156449)
chr8 (11-235)||(9022393-9022629)
chr8 (14-235)||(22601134-22601365)
chr8 (15-156)||(2812865-2813005)
chr8 (11-235)||(36915365-36915598)
chr8 (10-235)||(2803173-2803392)
chr8 (9-166)||(37185576-37185734)
chr8 (105-235)||(7612496-7612628)
chr8 (63-234)||(30788934-30789116)
chr8 (8-235)||(27109736-27109975)
chr8 (2-98)||(41414978-41415074)
chr8 (38-229)||(43938124-43938321)
chr8 (105-235)||(11257540-11257670)
chr8 (104-235)||(35052469-35052604)
chr8 (117-235)||(42946120-42946240)
chr8 (11-99)||(38328974-38329062)
chr8 (130-235)||(5588521-5588628)
chr8 (15-99)||(8106811-8106895)
chr8 (105-235)||(14541768-14541900)
chr8 (112-233)||(34461611-34461737)
chr8 (3-156)||(41790051-41790214)
chr8 (44-156)||(11335991-11336106)
chr8 (11-156)||(6839286-6839440)
chr8 (9-232)||(18673016-18673251)
chr8 (105-228)||(34168234-34168353)
chr8 (25-99)||(45187229-45187303)
chr8 (108-228)||(16208955-16209068)
chr8 (105-228)||(13108993-13109119)
chr8 (105-160)||(29931263-29931318)
chr8 (105-228)||(27416506-27416633)
chr8 (186-235)||(1774164-1774214)
chr8 (186-235)||(29931336-29931386)
chr8 (186-235)||(38329134-38329184)
chr8 (186-235)||(45187389-45187439)
chr8 (1-66)||(4760468-4760533)
chr8 (2-66)||(43448895-43448959)
chr8 (105-140)||(1774093-1774128)
chr8 (105-156)||(7129356-7129407)
chr8 (15-66)||(43084550-43084601)
chr8 (201-235)||(3203325-3203359)
chr8 (109-231)||(5044253-5044378)
chr8 (1-99)||(24732093-24732191)
chr8 (45-99)||(32061412-32061466)
chr8 (197-235)||(32061540-32061578)
chr8 (8-57)||(4530054-4530103)
chr8 (186-222)||(8107264-8107301)
chr8 (105-150)||(8471344-8471389)
chr8 (115-160)||(26439041-26439086)
chr8 (169-232)||(41414843-41414908)
chr8 (10-66)||(40228753-40228809)
[»] chr2 (52 HSPs)
chr2 (8-235)||(24775187-24775425)
chr2 (11-235)||(6591963-6592189)
chr2 (4-235)||(1360175-1360408)
chr2 (33-235)||(4536572-4536773)
chr2 (9-233)||(7743401-7743636)
chr2 (15-228)||(36360298-36360520)
chr2 (50-234)||(14511459-14511644)
chr2 (105-228)||(4840749-4840874)
chr2 (105-235)||(43388679-43388811)
chr2 (2-98)||(42970035-42970131)
chr2 (105-228)||(1298802-1298927)
chr2 (9-156)||(34225829-34225985)
chr2 (105-222)||(16316720-16316839)
chr2 (105-235)||(775906-776039)
chr2 (105-235)||(43344245-43344375)
chr2 (11-99)||(40987201-40987289)
chr2 (105-235)||(41984416-41984551)
chr2 (112-235)||(33093366-33093493)
chr2 (105-235)||(2459771-2459905)
chr2 (105-235)||(10580878-10581012)
chr2 (106-232)||(39866694-39866824)
chr2 (11-156)||(14378167-14378321)
chr2 (105-232)||(4566143-4566274)
chr2 (105-214)||(43460792-43460903)
chr2 (105-235)||(25332569-25332702)
chr2 (28-235)||(29795135-29795344)
chr2 (109-209)||(37106886-37106988)
chr2 (14-87)||(45147911-45147984)
chr2 (150-235)||(18374831-18374918)
chr2 (105-156)||(4766234-4766285)
chr2 (8-61)||(8774236-8774289)
chr2 (8-72)||(45081822-45081886)
chr2 (184-235)||(45148054-45148106)
chr2 (186-232)||(14378328-14378375)
chr2 (2-61)||(25383395-25383454)
chr2 (105-156)||(40410522-40410573)
chr2 (11-61)||(441150-441200)
chr2 (186-235)||(34225771-34225821)
chr2 (8-62)||(42005073-42005127)
chr2 (197-235)||(45372648-45372686)
chr2 (11-56)||(4566040-4566085)
chr2 (47-99)||(11171888-11171940)
chr2 (15-61)||(13562177-13562223)
chr2 (8-66)||(29808992-29809050)
chr2 (67-104)||(1381879-1381916)
chr2 (186-234)||(4766292-4766341)
chr2 (3-36)||(18579117-18579150)
chr2 (46-103)||(37107005-37107062)
chr2 (199-232)||(42969900-42969933)
chr2 (11-99)||(44228611-44228700)
chr2 (14-66)||(29396602-29396654)
chr2 (1-37)||(32228176-32228212)
[»] chr1 (65 HSPs)
chr1 (14-235)||(15646995-15647215)
chr1 (1-235)||(12851739-12851975)
chr1 (11-232)||(6377205-6377428)
chr1 (11-228)||(45377078-45377297)
chr1 (14-223)||(28751330-28751550)
chr1 (11-235)||(5317496-5317731)
chr1 (19-235)||(12002244-12002471)
chr1 (19-235)||(15698677-15698905)
chr1 (8-153)||(84434-84588)
chr1 (11-234)||(1428865-1429100)
chr1 (19-235)||(6332164-6332392)
chr1 (9-228)||(40719020-40719250)
chr1 (105-235)||(17806397-17806529)
chr1 (105-228)||(44582800-44582927)
chr1 (106-235)||(11650056-11650187)
chr1 (12-228)||(17919741-17919967)
chr1 (105-230)||(2245789-2245918)
chr1 (11-170)||(50349776-50349950)
chr1 (105-227)||(52403482-52403606)
chr1 (13-156)||(24040945-24041097)
chr1 (11-235)||(48259782-48260008)
chr1 (11-156)||(30006209-30006363)
chr1 (105-235)||(254933-255068)
chr1 (105-235)||(26252116-26252250)
chr1 (44-235)||(44583770-44583971)
chr1 (105-196)||(672303-672394)
chr1 (11-235)||(2459006-2459239)
chr1 (105-233)||(42650271-42650402)
chr1 (48-235)||(43738210-43738408)
chr1 (44-235)||(43929683-43929884)
chr1 (15-99)||(43105525-43105609)
chr1 (105-227)||(35149401-35149527)
chr1 (20-153)||(37437331-37437474)
chr1 (117-228)||(50158341-50158454)
chr1 (105-235)||(28200244-28200379)
chr1 (111-234)||(11134488-11134614)
chr1 (11-66)||(13408253-13408308)
chr1 (173-235)||(48320081-48320144)
chr1 (45-99)||(40060859-40060913)
chr1 (1-66)||(10842959-10843024)
chr1 (105-235)||(22664937-22665067)
chr1 (11-72)||(48009183-48009244)
chr1 (15-99)||(1430459-1430543)
chr1 (45-156)||(10690908-10691028)
chr1 (112-235)||(44024543-44024670)
chr1 (105-235)||(5854246-5854380)
chr1 (8-99)||(45749415-45749506)
chr1 (186-235)||(84598-84648)
chr1 (182-235)||(24041101-24041155)
chr1 (186-235)||(26582923-26582973)
chr1 (11-76)||(33087496-33087561)
chr1 (3-156)||(49894861-49895023)
chr1 (9-61)||(40717277-40717329)
chr1 (11-99)||(43755173-43755260)
chr1 (3-62)||(35847845-35847904)
chr1 (186-228)||(40061001-40061044)
chr1 (11-57)||(254830-254876)
chr1 (186-235)||(9333105-9333155)
chr1 (186-235)||(9356878-9356928)
chr1 (186-235)||(38132272-38132322)
chr1 (12-61)||(22665120-22665169)
chr1 (184-228)||(43755058-43755103)
chr1 (105-153)||(9552377-9552425)
chr1 (188-235)||(9552436-9552484)
chr1 (1-37)||(50094178-50094214)
[»] scaffold0007 (1 HSPs)
scaffold0007 (9-182)||(158153-158324)
[»] scaffold0886 (1 HSPs)
scaffold0886 (109-235)||(4135-4263)
[»] scaffold0072 (1 HSPs)
scaffold0072 (11-160)||(12001-12158)
[»] scaffold0119 (1 HSPs)
scaffold0119 (105-228)||(1548-1673)
[»] scaffold0060 (1 HSPs)
scaffold0060 (11-139)||(31649-31777)
[»] scaffold0047 (1 HSPs)
scaffold0047 (105-235)||(70475-70609)
[»] scaffold0194 (1 HSPs)
scaffold0194 (117-235)||(8156-8278)
[»] scaffold0003 (1 HSPs)
scaffold0003 (112-235)||(321724-321851)
[»] scaffold0519 (1 HSPs)
scaffold0519 (115-235)||(7732-7852)
[»] scaffold0238 (1 HSPs)
scaffold0238 (109-230)||(16065-16188)
[»] scaffold0565 (1 HSPs)
scaffold0565 (2-61)||(9570-9629)
[»] scaffold0015 (1 HSPs)
scaffold0015 (2-72)||(20991-21061)
[»] scaffold0136 (1 HSPs)
scaffold0136 (9-37)||(9412-9440)


Alignment Details
Target: chr7 (Bit Score: 131; Significance: 1e-67; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 40299072 - 40298846
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||  |||||    
T  40299072 tccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgcccaagaa 40298973  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaa 208  Q
    ||||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||| |||||| ||| ||| ||||||||||| ||||||||||||    
T  40298972 aaagacaaacttaaagttacattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaa 40298873  T
Q  209 tgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||| ||||| ||||||    
T  40298872 tgtaaagtgacattcattttgaaacaa 40298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 19920206 - 19920423
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaag 114  Q
    ||||| |||||||||| |||||||||||| || |||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||   |||||||||    
T  19920206 ttttagaataagtgtcattttagtcaattgcatacaaattaaggaatgaaatgaaataatcattagacatgacacttttactaaagtgtccaagaaaaag 19920305  T
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgta 212  Q
    ||  |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||| |||||||    
T  19920306 ac--aattaaagttgcattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgta 19920403  T
Q  213 aagtgacatttattttaaaa 232  Q
    |||||||||| |||||||||    
T  19920404 aagtgacattcattttaaaa 19920423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 5723223 - 5723009
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaa 107  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||     ||| |||||||||  ||||||||||||| |||  ||    
T  5723223 ccatccgttttaaaatgagtgtcgttttagtcaattgcacacaaattaaggaataaaat-----aatcattagacat--cacttttactaaactgcccaa 5723131  T
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaa 206  Q
    | |||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||| |||||| ||  |||||||||||||| ||||||||||    
T  5723130 ggaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagttaggagaaaaaattaaagttgtattgaa 5723031  T
Q  207 aatgtaaagtgacatttatttt 228  Q
    |||||||||||||||| |||||    
T  5723030 aatgtaaagtgacattcatttt 5723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 42259459 - 42259702
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaat 101  Q
    ||||| || ||||||| ||||| ||||||| | ||| ||||| |||||  ||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  42259459 aatactccttccgtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacacttttactaaaat 42259558  T
Q  102 gct---------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaat 192  Q
    ||          ||||||||||||||  |||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||| |||  |||||||||    
T  42259559 gcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaagtttgagtatttattgagggtaaagttggaagaaaaaat 42259658  T
Q  193 taaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| |||||||||||| ||||| | ||||| ||||||||||||    
T  42259659 taaagttgtattgaaaacgtaaaataacattcattttaaaacaa 42259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 33845344 - 33845563
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||||||||| ||||||| ||||| ||||||||| |||||||||      ||||||||||| |||| |  |||||||||||||||| |||  |||||    
T  33845344 tccgttttaaaatgagtgtcg-tttagccaattacacgcaaattaag-----taatgaaataatcattacatgtaacacttttactaaactgcccaagaa 33845437  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaa--aattaaa-ttgtattgaaa 207  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||||| ||||| ||||||| |||||| ||| |||||||  ||||||| || ||||||||    
T  33845438 aaagacaaacttaaagttgcattgaaaattgtgcgagaaaaaagttggagtaattattgagggtaaagttgggagaaaaataattaaagttctattgaaa 33845537  T
Q  208 atgtaaagtgaca-tttattttaaaa 232  Q
    ||||||| || || ||||||||||||    
T  33845538 atgtaaaatggcattttattttaaaa 33845563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 3680843 - 3681077
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||| |||||||||||||| ||  ||| | ||||| |||||  |||  ||||||||||| ||||||||||| |||||||||||| ||||          
T  3680843 tccgttttacaataagtgtcgtttaaga-aatgaaacacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttact 3680941  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-ttg 199  Q
       ||||||||||||||| |||||||| |||| |||||| || |||||||||||| | ||||||||| | |||||| |||  |||| ||||||||| |||    
T  3680942 ttataagaaaaagacaaatttaaagttgcatttaaaattctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttg 3681041  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||||||| ||||||||||||    
T  3681042 tattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 17869468 - 17869236
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ctt-- 105  Q
    |||| ||||| | ||| ||||||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||| |||| ||      |||      
T  17869468 gtttcaaaatgaatgttgttttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtctttacttta 17869369  T
Q  106 -aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtat 202  Q
     |||||||| ||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||| | |||| || ||  |||||||||||| ||| ||    
T  17869368 taagaaaaatacaaacttaaagttgcattgaaaattgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcat 17869269  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||||||||| ||||||| ||||| ||||||    
T  17869268 tggaaatgtaaaatgacattcattttgaaacaa 17869236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 30833014 - 30833245
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg-ctt---- 105  Q
    ||||||| ||||| ||||||| ||||||||||| |  ||| ||| | ||||  |||||||||||||||||| ||||||||||||||||| || |||        
T  30833014 tccgtttcaaaatgagtgtcgctttagtcaatttcgaacagatttaagaatagaatgaaataattattagatataacacttttactaaattgtcttgttt 30833113  T
Q  106 ---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa--ttgt 200  Q
       | |||||||||||| ||| |||| || |||||||| || |||| ||||||| |||||||||||||||||||| |||| |||||||| ||||  ||||    
T  30833114 tatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgt 30833213  T
Q  201 attgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||||| ||| ||| |||||||||    
T  30833214 attgaaaatgtaaaatgatattcattttaaaa 30833245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 34002155 - 34002274
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-ttgtat 202  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||| |||||| |||  |||| ||||||||| ||||||    
T  34002155 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtat 34002254  T
Q  203 tgaaaatgtaaagtgacatt 222  Q
    || |||||||||||||||||    
T  34002255 tggaaatgtaaagtgacatt 34002274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 41905957 - 41906088
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgtat 202  Q
    |||||||||||||||||||||||| ||||||||||| ||  ||||||||||| |||||||||||| ||||||| |||  ||||||||  | || ||||||    
T  41905957 taagaaaaagacaaaattaaagttgcattgaaaattgtgtaagagaaaagttggagtatttattg-aggtaaagttggaagagaaaacttaaagttgtat 41906055  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |  ||||||||||||||||||||||||||||||    
T  41906056 tagaaatgtaaagtgacatttattttaaaacaa 41906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 48838601 - 48838774
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg--ctta---- 106  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||||||| || ||||||| ||  ||||        
T  48838601 cgttttaaaataagtgttgttttaaccaattgcacacaaattaaggaataaaatgaaataatcattagacataacatttatactaaactgaccttacttt 48838700  T
Q  107 --------agaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaag 172  Q
            | ||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  48838701 ataaaaataaaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgaag 48838774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 33056201 - 33056358
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc----- 103  Q
    ||||||||| ||||| ||||||||||||||||||| |||| | |||||||||| |||||||||||| |||| ||||||||||||||||||| |||         
T  33056201 catccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgccctta 33056300  T
Q  104 -----ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
         |||||||||||||||| |||||  | ||||||||||| || ||||||||||||    
T  33056301 ctttattaagaaaaagacaaatttaaaactgcattgaaaattgtgtgagagaaaagtt 33056358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 6522053 - 6521817
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ct 104  Q
    ||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| |||| || || | |   | ||||||| || |||||||||       ||    
T  6522053 tccgttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataaccttact 6521954  T
Q  105 t---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaa--aagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaatt 198  Q
    |   |||||||||||||| ||||| ||  |||||||||| || ||||||   || ||||||||||||||||||||||| |||| |||||||| |||||||    
T  6521953 ttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagtatttattgaaggtaaagttgaaagaaaaaatttaaatt 6521854  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | ||||||||||||||| || ||| ||||||||||||    
T  6521853 gcattgaaaatgtaaagcgatattcattttaaaacaa 6521817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 18733671 - 18733452
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaa 107  Q
    |||| ||||| |||||||||||||||||||||||||  |||||||||||| | |  ||||||||||| ||||  ||||||||||            |||     
T  18733671 ccattcgtttcaaaataagtgtcgttttagtcaattgtacacaaattaagtagtggaatgaaataatcattaagcataacactt------------ttat 18733584  T
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag---aaaaaattaaa-ttgtatt 203  Q
    |||||||||||| |||||||| |||||||| || || |||| |||| || ||||||||||||| |||| | ||   ||   ||||||||||| |||||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaaaaattggagtatttattgagggtagagttcgaagaaaaaaaaattaaagttgtatt 18733484  T
Q  204 gaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||| ||||| ||||||    
T  18733483 gaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 19906538 - 19906413
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa--ttgtattgaaaat 209  Q
    |||||||| |||||||| ||||||||||| || |||||||||||| || |||||||||| |||||| |||  |||||||| ||||  |||||||| ||||    
T  19906538 aagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaataaaagttgtattggaaat 19906439  T
Q  210 gtaaagtgacatttattttaaaacaa 235  Q
    |||||| |||||| ||||| ||||||    
T  19906438 gtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 19920857 - 19920915
Alignment:
Q  368 tatatgatatttcattacttcttttttaattatctatatcatatgaattgaattggtct 426  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19920857 tatatgatatttcattacttcttttttaattatccatatcatatgaattgaattggtct 19920915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 1103611 - 1103483
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaa-aattaaa-ttgtattgaa 206  Q
    ||||| ||||| |||||||| ||||||||||| || ||||||||||||  |||||||||||| |||||| |||  |||||| ||||||| |||||||| |    
T  1103611 aaaaaaacaaatttaaagttacattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattgga 1103512  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| ||||||| ||||| ||||||    
T  1103511 aatgtaaaatgacattcattttgaaacaa 1103483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 10684738 - 10684965
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaa 100  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||| | |||||||||| |||| ||||| |||     ||||||| |||||||||||    
T  10684738 taatactccatccgtttcaaaataagtgtcgttttaatcaattacacatatattaaggaataaaataaaatagttaaatatcataacaattttactaaaa 10684837  T
Q  101 t--gct-------taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaa 188  Q
    |   ||       ||||||||||||||| ||||||||  |||||||||  | || ||||||||||||| | |||||||| | |||||| |||  || |||    
T  10684838 taaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagttttaatatttattaagggtaaagttggaagaaaa 10684937  T
Q  189 aaattaaa-ttgtattgaaaatgtaaag 215  Q
    |||||||| ||| |||||||||||||||    
T  10684938 aaattaaagttgcattgaaaatgtaaag 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 26963612 - 26963478
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaatta--tgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||||||||| |||||||| ||||||||||||  || |||||||||||| ||||||| ||||| |||||| |||  || ||||||||||| |||     
T  26963612 taagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaagaaaaaaattaaagttgc 26963513  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| |||||||||  |||||||||||| ||||||    
T  26963512 attggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 31416772 - 31416906
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    |||||| |||||||| |||||||| ||||||||||| || ||||||  ||| ||  |||||||||||| |||||| |||  |||||||| ||||| ||||    
T  31416772 taagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 31416871  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||| ||| ||||||||||||    
T  31416872 attgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 36447091 - 36447225
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgt 200  Q
    |||||| |||||||  |||||||| ||||||||||| || ||||||  |||||| ||||||||| ||| | |||| |||  ||||||||| | |||||||    
T  36447091 taagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaattaaaattgt 36447190  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||| ||||||| ||||| ||||||    
T  36447191 attgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 42044016 - 42044127
Alignment:
Q  121 ttaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaaaatgtaaagt 216  Q
    |||||||| ||||||||||| || ||||||  |||||| ||||||||||||| |||||| |||  |||||||| ||||| ||||||||||||||||||||    
T  42044016 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagt 42044115  T
Q  217 gacatttatttt 228  Q
    |||||| |||||    
T  42044116 gacattaatttt 42044127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 369
Target Start/End: Original strand, 19920466 - 19920564
Alignment:
Q  267 ggagtactagttgagaaaatgtatggaaaactgagagagagnnnnnnnnncacacagcagcatacgtcaaagtgaaacgaattctaccgtctggtgaata 366  Q
    |||| ||||||||||||||| ||||||||| |||||||||          ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  19920466 ggagaactagttgagaaaatttatggaaaaatgagagaga----aaaaaacacacagcaacgtacgtcaaagtgaaacgaattctaccgtctggtgaata 19920561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 32345856 - 32345990
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||| ||||| ||||||||  |||||||||| || ||||  |||||||| ||||||||||||| |||||| |||  || ||||||||||| |||     
T  32345856 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 32345955  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||| |||||| ||||| ||||||    
T  32345956 attgaaaatgtaaagcgacattcattttgaaacaa 32345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 34733508 - 34733374
Alignment:
Q  46 acacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattgaa 136  Q
    ||||||| |||| ||| |||||||||||| |||||||||||||||||||||||| | |          ||||||||||||||| |||||||| |||||||    
T  34733508 acacaaaataagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaa 34733409  T
Q  137 aattatgcgagagaaaagtttgagtatttattgaagg 173  Q
    |||  || ||||||||| || ||||||||||||||||    
T  34733408 aat--tgtgagagaaaaattggagtatttattgaagg 34733374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 30515107 - 30514972
Alignment:
Q  104 ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa--gtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttg 199  Q
    ||||||| |||||||| ||||||||  ||| |||||| |  |||||||||  ||| |||||||||||||||||||| |||  || ||||||||||| |||    
T  30515107 ttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttg 30515008  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| ||||||||| ||||||| ||||| ||||||    
T  30515007 tattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 42121768 - 42121688
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||| ||||||| ||||| ||||| |||||| |||||||||| |||| ||||||| |||||||||| |||||||||||||    
T  42121768 aaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaa 42121688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 499
Target Start/End: Original strand, 19921345 - 19921424
Alignment:
Q  418 aattggtctgtaaaaaagattacactataagtgtgtgtgtcaacctccnnnnnnngttgtagtatatcaattaaattcatat 499  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||         |||||||||||||||||||||||||    
T  19921345 aattggtctgtaaaaaagattacactctaagtgtgtgtatcaacctccaaaaaag--tgtagtatatcaattaaattcatat 19921424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 36836184 - 36836058
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaaa 207  Q
    |||||||| |||||||| |||||||||||||| ||||||  ||| || |||| |||| ||| |||||| |||  |||||||| ||||| |||||||||||    
T  36836184 aagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtgtttactga-ggtaaagttggaagaaaaaaattaaagttgtattgaaa 36836086  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| |||||| ||||| ||||||    
T  36836085 atgtaaagcgacattcattttgaaacaa 36836058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 26527370 - 26527548
Alignment:
Q  64 aatgaaataattattagacataacacttttactaaaatgctt---------aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaag 154  Q
    |||| |||||| |||||||||||||| ||||||||| |||||         |||||||| | ||| |||||||| |||||||||||||   | |||||||    
T  26527370 aatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaaaa-aaatttaaagttgcattgaaaattatttaacagaaaag 26527468  T
Q  155 tttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    || ||||||||||||| | |||| || ||   ||||||||||| |||||||||||||||||| | ||||| |||||||||    
T  26527469 ttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcattttaaaa 26527548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 28044236 - 28044286
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  28044236 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 28044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 39117510 - 39117636
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga-aaagtttgagtatttattgaaggtaaaattgagagaaaa-aattaaa-ttgta 201  Q
    |||||| |||||||| |||||||| ||||||||||| || |||||| ||| || ||||||| ||||| |||||  |||  |||||| ||||||| |||||    
T  39117510 taagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagggtaatgttggaagaaaataattaaagttgta 39117609  T
Q  202 ttgaaaatgtaaagtgacatttatttt 228  Q
    |||||||||||||  |||||| |||||    
T  39117610 ttgaaaatgtaaaacgacattcatttt 39117636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 32275429 - 32275341
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| || |||||||||  ||||| |||||| |||||| ||| |||||||||||| |||| |||| ||  ||||||||||    
T  32275429 tccgttttaaaatgagcgtcgttttaaccaattgcacacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaa 32275341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 36447633 - 36447684
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||||    
T  36447633 taagaaaaagataaaattaaagttgaattgaaaattatgtgagagaaaagtt 36447684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 40805073 - 40805026
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  40805073 aaaaaattaaagttgtattgtaaatgtaaagtgacatttattttaaaa 40805026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 45948544 - 45948591
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaatta 55  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  45948544 ccatccgttttaaaatgagtgtcgttttagtcaatcacacacatatta 45948591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18886718 - 18886668
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  18886718 aaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaacaa 18886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22597279 - 22597229
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  22597279 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 22597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 40339695 - 40339646
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaag 57  Q
    ||||||||||||||||| |||||||||||| ||||| |||||| ||||||    
T  40339695 ccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaag 40339646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 28044163 - 28044211
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa 153  Q
    ||||||||||||||||||||||||  |||||||||| || |||||||||    
T  28044163 taagaaaaagacaaaattaaagttgtattgaaaattgtgtgagagaaaa 28044211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 18886776 - 18886725
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||| ||||||||||||||||||| ||||||||||| || || |||||||||    
T  18886776 taaggaaaagacaaaattaaagttgcattgaaaattgtgtgaaagaaaagtt 18886725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 42010597 - 42010648
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||||||||||||| |||||||| ||||||||||| |  ||||||||||||    
T  42010597 taagaaaaagacaaacttaaagttacattgaaaattgtatgagagaaaagtt 42010648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 45933496 - 45933567
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    |||||| || ||||||||||||| ||||||| ||||| || || |||||| ||||||||||| ||| |||||    
T  45933496 taatactccctccgttttaaaatgagtgtcgctttagccacttgcacacagattaaggaattgaataaaata 45933567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7795157 - 7795215
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||||| ||||| ||||||| ||||| |||||  |||||||||||||||| ||||    
T  7795157 ccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaat 7795215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 10599597 - 10599547
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||||||||| |||||||||||| |||||| |||| | ||||||||||    
T  10599597 tccgttttaaaatgagtgtcgttttaatcaattgcacatatattaaggaat 10599547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 22597388 - 22597303
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||| ||||| ||||||| ||||| |||||  | ||| |||||| |||  |||||||||| ||||||||||| |||||||||||||    
T  22597388 cgtttcaaaatgagtgtcgctttag-caattgtatacagattaagaaatctaatgaaataaatattagacatatcacttttactaaa 22597303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 32873268 - 32873318
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||||||||||    
T  32873268 aaaaaattaaaattgtattggaaatataaagtgacattcattttaaaacaa 32873318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 37815958 - 37815908
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||||||||| ||||||||||||| ||||| |||||| ||||| ||||    
T  37815958 tccgttttaaaatgagtgtcgttttagccaattgcacacatattaaagaat 37815908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 43813449 - 43813499
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||||||||||    
T  43813449 aaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 43813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 19288410 - 19288495
Alignment:
Q  145 gagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    |||||||||||| ||| ||||||||| |||||| || ||   ||||||||||| |||||||  ||||||||||||||||| |||||    
T  19288410 gagagaaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 19288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 22627314 - 22627427
Alignment:
Q  52 attaaggaattaaatgaaataattattagacataacacttttactaaaatgctt---------aagaaaaagacaaaattaaagtttcattgaaaattat 142  Q
    |||||||||| ||||||||||||  ||| ||||||||| ||||||||| ||| |         || || |||||||| |||||||| ||||||||||| |    
T  22627314 attaaggaatgaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattgt 22627413  T
Q  143 gcgagagaaaagtt 156  Q
    | ||||||||||||    
T  22627414 gtgagagaaaagtt 22627427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 29530854 - 29530907
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||||| ||||||| ||||| ||||| |||||| |||||||||| ||||    
T  29530854 cgttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaat 29530907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36446978 - 36447038
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||||| ||||| |||||||||| ||||| | ||||| ||||| |||||||||||| ||||    
T  36446978 taatactccatctgttttaaaatgagtgttgctttagacaattgcacacaaattaatgaat 36447038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44453377 - 44453317
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||||| || ||||||||||||| ||||||||||||| ||||| || ||| ||||| ||||    
T  44453377 taatactccttccgttttaaaatgagtgtcgttttagccaattgcatacagattaaagaat 44453317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 12989 - 13213
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaa 112  Q
    |||||||| || | |||||||||||| |||| |||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12989 cgttttaagatgaatgtcgttttagttaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgcttaagaaaa 13088  T
Q  113 agacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa--ttaaattgtattgaaaatg 210  Q
    |||||||||||||||| ||||||||||| |||  ||||||||||  |||||||||||| |||||| ||| |||||||||  | ||||||||||| |||||    
T  13089 agacaaaattaaagttacattgaaaattgtgccggagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaaatg 13188  T
Q  211 taaagtgacatttattttaaaacaa 235  Q
    ||||||||| || ||||||||||||    
T  13189 taaagtgacgttcattttaaaacaa 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 31987528 - 31987302
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaa 107  Q
    |||||||||||||||| |||||||||||||| |||| || |||||||||  ||| |||||||||||| |||||| ||||||||||||||||| |||| ||    
T  31987528 ccatccgttttaaaatgagtgtcgttttagttaattgcatacaaattaaaaaataaaatgaaataatcattagagataacacttttactaaactgctgaa 31987429  T
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattga 205  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||  || ||||||||||| |||||||      
T  31987428 gaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattag 31987329  T
Q  206 aaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||||||||||| |||||||||    
T  31987328 aaatgtaaagtgacattcattttaaaa 31987302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 54092179 - 54091953
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||||||||| |||||||||||| |||||| || |||||||||||||| |||||||||| | |||| |||||| |||||||| ||| |||  |||||    
T  54092179 tccgttttaaaatgagtgtcgttttaatcaattgcatacaaattaaggaatgaaatgaaatagtcattaaacataatacttttaccaaattgcccaagaa 54092080  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-ttgtattgaaaa 208  Q
    ||||||||| ||||| ||  |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||| ||||||| ||||    
T  54092079 aaagacaaacttaaaattgtattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattaaaaa 54091980  T
Q  209 tgtaaagtgacatttattttaaaacaa 235  Q
    | |||| ||||||| ||||||||||||    
T  54091979 tctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 30492950 - 30492736
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||| ||||| ||||| ||||||| ||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||| || |||  |||||    
T  30492950 tccgtttcaaaatgagtgtggttttagccaattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactgaactgcccaagaa 30492851  T
Q  111 aaagacaaaattaaagtttcatt-gaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaa 207  Q
    ||||||||| |||||||| ||||  |||||| ||| ||||||||||| ||||||||||||| |||||| ||| ||| ||||||||||| |||||||||||    
T  30492850 aaagacaaacttaaagttgcattaaaaaattgtgcaagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 30492751  T
Q  208 atgtaaagtgacatt 222  Q
    |||||||||||||||    
T  30492750 atgtaaagtgacatt 30492736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 29840285 - 29840070
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||| ||||| ||||||||||||  ||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  29840285 tccgtttcaaaatgagtgtcgttttacccaattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaaatgctcaagaa 29840186  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaa-ttgtattgaaa 207  Q
    ||||||||| ||||||            || ||||||||||||||| ||||||||||||| |||||| ||  |||| ||||||||||| |||||||| ||    
T  29840185 aaagacaaacttaaag------------ttgtgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgtattggaa 29840098  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||| ||||| ||||||    
T  29840097 atgtaaagtgacattcattttgaaacaa 29840070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 34096249 - 34096010
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct--- 104  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||||||||  ||| |||||||||||| ||||||| |||||||||||||||| |||        
T  34096249 ccatccgttttaagatgagtgtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgccctt 34096150  T
Q  105 ------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa---ttaa 195  Q
          ||||||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||| |||||| |||| | ||||||   | ||    
T  34096149 actttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgagagaaaagtttgaatatttattgagggtaaagttgaaaaaaaaaaaattaaa 34096050  T
Q  196 attgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||  ||||||||| |||||||  |||| ||||||    
T  34096049 attgtattagaaatgtaaattgacattcgttttgaaacaa 34096010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 45049926 - 45049707
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaa 113  Q
    |||||||||| |||| ||||||| |||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| ||||  |||  || |||||    
T  45049926 gttttaaaatgagtgacgttttaatcaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttcctaagctgcccaa-aaaaa 45049828  T
Q  114 gacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaattgtattgaaaatgt 211  Q
     ||||| |||||||| ||||||||||| ||||| ||||||||  ||||| |||||||  ||||| ||  |||| ||||| | ||||| |||| |||||||    
T  45049827 tacaaacttaaagttgcattgaaaattgtgcgaaagaaaagtaggagtacttattgagagtaaagttcggagaaaaaaattaaaattatattaaaaatgt 45049728  T
Q  212 aaagtgacatttattttaaaa 232  Q
    ||||||||||| |||||||||    
T  45049727 aaagtgacattaattttaaaa 45049707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 47321377 - 47321139
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ct 104  Q
    ||||||||||||| ||||||||||||| ||||| |||||| ||||||||||| ||| ||||| | |   | |||| || ||||||||||||       ||    
T  47321377 tccgttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttact 47321278  T
Q  105 t---aagaaaaagacaaaattaaagtttcattgaaaattatgcgag--agaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa- 196  Q
    |   |||||||||||||  |||||||| ||||||||||| ||||||  ||||||||| ||||||||||||| |||||| |||  ||| |||||||||||     
T  47321277 ttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaaattaaag 47321178  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  47321177 ttgtattgaaaatgtaaagtgacattcattttaaaacaa 47321139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 216
Target Start/End: Complemental strand, 42672622 - 42672404
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct--- 104  Q
    |||| ||||| ||||| ||||||  ||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||||| | ||       
T  42672622 ccatgcgtttcaaaatgagtgtcaatttagtcaattgcacacaaattaaggaatataatgaaataatcattagacataacacttttactaaactactcat 42672523  T
Q  105 ------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-t 197  Q
          ||||||||||||||| ||||||||  |||||||||| ||  ||||| |||||  |||||||||||| |||||| ||| ||||||||||||||      
T  42672522 actttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaagagagaagttgaagtatttattgagggtaaagttgggagaaaaaattaaagg 42672423  T
Q  198 tgtattgaaaatgtaaagt 216  Q
    || ||||||||| ||||||    
T  42672422 tgcattgaaaatataaagt 42672404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 38692611 - 38692466
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||||||| | | ||| ||||||| ||||| || | |||||||||||| |||||||||||| || | | ||||||||||||||||||| |  |||||    
T  38692611 tccgttttaaagtgaatgttgttttagccaattgcatataaattaaggaatgaaatgaaataatcatcaaagataacacttttactaaaatacccaagaa 38692512  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  38692511 aaagacaaaattaaagttgcattgaaaattgtgcgagagaaaagtt 38692466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 17499637 - 17499874
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ct 104  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||| |||| |||| ||||| | |   | ||||||| ||||||||||||       ||    
T  17499637 tccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaataacattact 17499736  T
Q  105 t---aagaaaaagacaaaattaaagtttcattgaaaatt--atgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaat 197  Q
    |   |||||||||||||| |||||||| |||||||||||  ||| |||||||||||||||||||||||||| |||||| |||  ||| ||||| | ||||    
T  17499737 ttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaat 17499836  T
Q  198 tgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || |||| |||||||||| |||||| ||||| ||||||    
T  17499837 tgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 37445844 - 37445655
Alignment:
Q  57 ggaattaaatgaaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattgaaaattatgcgag 147  Q
    ||||| |||||||||||| |||||||||||||||||||||||| |||          ||||||||||||||| |||||||| |||| ||||||||| ||     
T  37445844 ggaatgaaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaa 37445745  T
Q  148 agaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| ||||| |||||||||| |||||| |||  || ||||||||||| ||||||| |||||||||| ||||||| ||||||||||||    
T  37445744 agaaaaatttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 30022293 - 30022063
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgctt--------a 106  Q
    ||||||||| |||||||||||||  |||| |||| | |||||||||| |||| ||||||| |||| | ||||||||||||||||| | | |        |    
T  30022293 ttttaaaatgagtgtcgttttagcaaattgcacatagattaaggaatgaaataaaataatcattatatataacacttttactaaactaccttcttgtata 30022194  T
Q  107 agaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattg 204  Q
    ||||||||||||| | |||||| ||||||||||| || ||||||||||||  |||||||||||| |||||| |||  || ||||||||||| ||||||||    
T  30022193 agaaaaagacaaactcaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattg 30022094  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
     |||||| |||| ||||| ||||| ||||||    
T  30022093 gaaatgtcaagtaacattcattttgaaacaa 30022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 31941687 - 31941553
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa--gtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    |||||| |||||||| |||||||| |||||||||||||| |||||| ||  ||| ||||||||||||| |||||| |||  |||||||| ||||| ||||    
T  31941687 taagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 31941588  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||| ||||||||||||    
T  31941587 attgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 32140795 - 32140886
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  32140795 ccatccgtttcaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgaaatcaaataatcattaaacataacacttttactaaa 32140886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 22212574 - 22212336
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc---- 103  Q
    ||||||||||||||||  |||||| ||||| |||||  ||||| |||||||||| |||||||||||| |||||||||||||||||||| ||| |||        
T  22212574 ccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactgccttt 22212475  T
Q  104 -----ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa- 196  Q
          ||  |||||  |||| ||||||||  |||||||||| || |||| ||| ||| ||||||||||||| |||||| |||  || |||||||||||     
T  22212474 gttttatataaaaaactcaaacttaaagttgtattgaaaattgtgtgagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaag 22212375  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||||| |||||||| |||||||| ||||||||||||    
T  22212374 ttatattggaaatgtaaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 6510241 - 6510113
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaa 206  Q
    ||||||||||| ||||| || |||| |||||| ||  ||||||||| | ||||||||||||| |||||| ||||||||||||| ||||| ||||||||||    
T  6510241 aaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtggagtatttattgagggtaaagttgagagaaaaaagttaaagttgtattgaa 6510142  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    ||| |||||||||||||||||| ||||||    
T  6510141 aatataaagtgacatttattttgaaacaa 6510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 19849211 - 19849079
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    ||||||||| ||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||| |||||| |||  || ||||||||||| ||||||    
T  19849211 taagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 19849112  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || || |||||||||| ||| ||||||||||||    
T  19849111 tggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 45520483 - 45520611
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtatt 203  Q
    |||||| |||||||| |||||||| |||| |||||| |  |||||||||||||||||||||||  | | |||| |||  ||||||||||||| |||||||    
T  45520483 taagaataagacaaacttaaagttgcattaaaaattgtatgagagaaaagtttgagtatttatcaaggataaagttggaagaaaaaattaaagttgtatt 45520582  T
Q  204 gaaaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||||||||||||| |||||||||    
T  45520583 gaaaatgtaaagtgacattcattttaaaa 45520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 44855371 - 44855245
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaa--aattg--agagaaaaaattaaattgt 200  Q
    |||| ||||||||||||||||||| ||||||||||| || |||||||||||| || |||||||||| |||||  |||||  ||||||||  | || ||||    
T  44855371 taaggaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggattatttattgagggtaaagaattggaagagaaaacttaaagttgt 44855272  T
Q  201 attgaaaatgtaaagtgacatttattt 227  Q
    |||| ||||||||||||||||||||||    
T  44855271 attggaaatgtaaagtgacatttattt 44855245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 34124424 - 34124290
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||| ||||| ||||||||  |||||||||| || ||||||  |||||||||||||||||||| |||||| |||  || ||||||||||| |||     
T  34124424 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 34124325  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||| |||||| ||||||||||||    
T  34124324 attgaaaatgtaaagcgacattcattttaaaacaa 34124290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 34360238 - 34360081
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc---- 103  Q
    |||||| ||| | ||| ||||||| ||||||||||| ||  || |||||||||| |||||||||||| |||||| ||||||||||||||||| |||        
T  34360238 ccatccatttcagaatgagtgtcgctttagtcaattgcatccagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgccctt 34360139  T
Q  104 -----ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
          ||||||||||||||| |||||||| ||||||||||| || ||||||||||||    
T  34360138 actttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 34360081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 36805376 - 36805460
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||| |||||||||||| | |||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  36805376 gttttaaaatgagtgtcgttttact-aattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaa 36805460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 28116374 - 28116247
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcg--agagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    |||||| |||||||| |||||||| || |||||||| || |  ||||||||||||||||||||||| | |||||| |||  |||||||| ||||| ||||    
T  28116374 taagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaagaaaaaaattaaagttgt 28116275  T
Q  201 attgaaaatgtaaagtgacatttatttt 228  Q
    |||| |||||||||||||||||||||||    
T  28116274 attggaaatgtaaagtgacatttatttt 28116247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 51737248 - 51737332
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||| ||||||| ||||||||| |  ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  51737248 ttttaaaatgagtgtcgctttagtcaactgtacacaaattaaggaatagaatgaaataataattagacataacacttttactaaa 51737332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 24259740 - 24259606
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    |||||||| |||||| |||||||| ||||||||||| || ||||||  |||||| ||||||||||||| |||||| |||  || ||||||||||| |||     
T  24259740 taagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 24259641  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||||||||||| ||||| ||||||    
T  24259640 attggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 11835293 - 11835109
Alignment:
Q  52 attaaggaattaaatgaaataattattagacataacacttttactaaaatgctta--------agaaaaagacaaaattaaagtttcattgaaaattatg 143  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| |||| | | ||        |  |||||| ||| |||||||| ||||||||||| ||    
T  11835293 attaagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagtttataagaaaagataaacttaaagttgcattgaaaattgtg 11835194  T
Q  144 cgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
     |||||||  | |||||||||||||||||||||| |||| || ||||||||||| || |||| |||||||||||||||||| |||||    
T  11835193 tgagagaa--ggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaaatgtaaagtgacattcatttt 11835109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 19282474 - 19282567
Alignment:
Q  145 gagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||| |||||||||||||||||||| |||  ||| ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  19282474 gagagaaaagttagagtatttattgaaggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 17317892 - 17317987
Alignment:
Q  130 cattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatt 222  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||| |||  ||| ||||||||||| |||||||| |||||||| ||||||||    
T  17317892 cattgaaaattgtgtgagataaaagtttgagtatttattgaaggtaaagttgaaagaaaaaaaattaaagttgtattggaaatgtaatgtgacatt 17317987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 29289920 - 29290044
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaattgtattgaa 206  Q
    ||||||||||| ||||| || ||||||||||| || ||||||||||||  ||||||||||| ||||||| ||   ||| ||||| | || ||||||||||    
T  29289920 aaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaagttgaagtatttattg-aggtaaagtttgaagaaaaaaattgaagttgtattgaa 29290018  T
Q  207 aatgtaaagtgacatttattttaaaa 232  Q
    ||| |||||||||||| |||||||||    
T  29290019 aatataaagtgacattaattttaaaa 29290044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 35928616 - 35928486
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtat 202  Q
    ||||||||||| ||| ||||| || ||||||||||| ||  | ||||| |||  |||||||||||| |||||| |||  |||||||| ||||| ||||||    
T  35928616 taagaaaaagataaacttaaaattgcattgaaaattgtg--aaagaaacgttgcagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 35928519  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||| ||||||||| ||||||    
T  35928518 tgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 29519446 - 29519509
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||| |||||    
T  29519446 catccgttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataaaata 29519509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 45889692 - 45889559
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    ||||||||| ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||| |||||| | |  |||||||| ||||| ||||    
T  45889692 taagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaagttaaagttgt 45889593  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| ||| |||||| ||||| ||||||    
T  45889592 attgaaaatgt-aagcgacattcattttgaaacaa 45889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 50623318 - 50623263
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  50623318 tccgttttaaaatgagtgtcgttttagtcaattacacacatattaaggaatgaaat 50623263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 56556192 - 56556286
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||| || ||||||||||||| ||||||| ||||  ||||| |||||| ||||||||||| |||||   ||| ||||||||||||||||||||||||    
T  56556192 aatactccctccgttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaattgaatga---aatcattagacataacacttttactaaa 56556286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 233
Target Start/End: Original strand, 38761857 - 38761978
Alignment:
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaat 209  Q
    ||||||| | |||||||| | ||||||||| ||  ||||||||||| ||||||||||||| | |||| |||| | || |||||||| ||| |||||||||    
T  38761857 aaagacacacttaaagttaccttgaaaattgtg--agagaaaagttggagtatttattgaggttaaagttgaaaaaataaattaaagttgaattgaaaat 38761954  T
Q  210 gtaaagtgacatttattttaaaac 233  Q
    ||||||||||| | ||| ||||||    
T  38761955 gtaaagtgacactcattataaaac 38761978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 3093460 - 3093351
Alignment:
Q  121 ttaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgtattgaaaatgtaaagtgaca 220  Q
    |||||||| ||| | ||||| || ||||||||||||  |||||||||||||  |||| ||| |||||||||  || || |||||||||||||||||||||    
T  3093460 ttaaagttgcatcggaaattgtgtgagagaaaagttgaagtatttattgaaa-taaagttg-gagaaaaaaaaaagttatattgaaaatgtaaagtgaca 3093363  T
Q  221 tttattttaaaa 232  Q
    || |||||||||    
T  3093362 ttcattttaaaa 3093351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 21045260 - 21045209
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  21045260 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 21045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 51434280 - 51434414
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaa-attgagagaaaaaattaaa-ttgt 200  Q
    |||||||||||| || || ||||| ||||||||||  | || ||||||||||||  |||||||||||| ||||||  ||||  |||||||||||| |||     
T  51434280 taagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaaggaaaaaattaaagttgc 51434379  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||  |||||||||| |||||| ||||||||||||    
T  51434380 attagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 235
Target Start/End: Complemental strand, 52732819 - 52732594
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct-------- 104  Q
    ||||||||||| |||| |||||||| |  | ||||| | |||||  |||  ||||||||||| ||| || ||||||||||||||||| |||             
T  52732819 cgttttaaaatgagtgacgttttaggctttgacacatagattaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttacttt 52732720  T
Q  105 -taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgt 200  Q
     |||| ||||||||||||||||||| ||||||||||| || |||||||||||| |          || |||||| |||  ||| ||||||||||| ||||    
T  52732719 ataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgg---------ggagggtaaagttggaagaaaaaaaattaaagttgt 52732629  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||||||||||| ||||||||||||    
T  52732628 attggaaatgtaaagtgacattcattttaaaacaa 52732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 4408200 - 4408335
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttg 199  Q
    ||||||||||||||| ||||| || ||||||||||  | || |||||||||||||||| ||||||||| | |||| | |  |||  |||||||||| |||    
T  4408200 taagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaagtcggaagaagaaaaattaaagttg 4408299  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
     ||||| ||||||||| |||||| ||||| ||||||    
T  4408300 cattgagaatgtaaagcgacattcattttgaaacaa 4408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 32140943 - 32140996
Alignment:
Q  46 acacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  32140943 acacagattaagaaattgaatgaaataatcattagacataacacttttactaaa 32140996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 40010792 - 40010845
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||||||||| ||||| ||||||||||||||| |||||||||| ||||||||||    
T  40010792 ccatccgtttcaaaatgagtgtcgttttagtccattacacacatattaaggaat 40010845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 43421080 - 43421197
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattga 135  Q
    ||||||||||||| |||  ||||||||||| ||| || |||| |||||||||||| ||||         |||||||||||||||||||||||| ||||||    
T  43421080 cacacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgctcttactttataagaaaaagacaaaattaaagttgcattga 43421179  T
Q  136 aaattatgcgagagaaaa 153  Q
    | ||| || |||||||||    
T  43421180 atattgtgtgagagaaaa 43421197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 54512255 - 54512099
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---- 104  Q
    |||| |||| ||||| ||| ||| |||||||  | ||||||| |||||| ||| |||||||||||| ||| || |||||  |||||||||| ||||        
T  54512255 catctgtttcaaaatgagtatcgctttagtctttgacacacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactgctctta 54512156  T
Q  105 -----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
         |||||||| ||||||||||||||| ||||||| ||| || ||||||||||||    
T  54512155 ctttataagaaaatgacaaaattaaagttgcattgaacattgtgtgagagaaaagtt 54512099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 6232136 - 6232191
Alignment:
Q  181 gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  6232136 gagaaaaaaaattaaagttgtattgaaaatgtaaattgacatttattttgaaacaa 6232191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 51930703 - 51930652
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||| ||||||||||||||| ||||||||||| || ||||||||||||    
T  51930703 taagaaaatgacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 51930652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21045201 - 21045151
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  21045201 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 21045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 38991686 - 38991732
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaag 57  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  38991686 tccgttttaaaatgagtgtcgttttagtcaattgcacacagattaag 38991732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 50072326 - 50072276
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  50072326 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 50072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2728311 - 2728372
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaatt 62  Q
    |||||| |||||||||| ||||| ||||||| ||||| ||||| |||||| |||||||||||    
T  2728311 taatactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatt 2728372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 42605806 - 42605745
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    ||||||||||||| || |||||||||||||||| |||||| ||||| |||| |||| |||||    
T  42605806 tccgttttaaaatgagcgtcgttttagtcaattgcacacagattaaagaataaaataaaata 42605745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54042095 - 54042144
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacaca 50  Q
    |||||| |||||||||||||||| ||||||||||||| ||||| ||||||    
T  54042095 taatactccatccgttttaaaatgagtgtcgttttagccaattgcacaca 54042144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 45889796 - 45889740
Alignment:
Q  10 atccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||| ||||| ||||||||||||| ||||| |||||| |||||||||| ||||    
T  45889796 atccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaat 45889740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 45903443 - 45903555
Alignment:
Q  118 aaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaag 215  Q
    ||||||||||| |||||||||||    |||||||||||  ||||| || |||| | | || |||  || ||||||||||| |||||||||||||||||||    
T  45903443 aaattaaagttgcattgaaaattggatgagagaaaagtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaag 45903542  T
Q  216 tgacatttatttt 228  Q
    ||||||| |||||    
T  45903543 tgacattcatttt 45903555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 31817229 - 31817276
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||| |||||||||||||| ||||||||||| || ||||||||||||    
T  31817229 aaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 31817276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 37654644 - 37654589
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||| ||||| ||||||||||||| ||||| |||||| |||||||||| ||||    
T  37654644 tccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaat 37654589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 39671131 - 39671182
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||||||| ||||| |||||||| ||||||||||| || ||||||||||||    
T  39671131 taagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 39671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 45043514 - 45043561
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||| ||||||||||||||||||||||||| ||||||  |||||||||    
T  45043514 gtttcaaaataagtgtcgttttagtcaattgcacacattttaaggaat 45043561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 49089693 - 49089642
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||| |||||||||||| |||||| |||||| |||||||||| ||||    
T  49089693 ttttaaaatgagtgtcgttttaatcaattgcacacatattaaggaatgaaat 49089642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 53814412 - 53814475
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||| |||||||||||||||| ||||||||||||  ||||  |||||| |||||||||| ||||    
T  53814412 atactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaat 53814475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2493339 - 2493281
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||||| ||||| ||||||||||| | ||||| |||||| |||||||||| ||||    
T  2493339 ccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaat 2493281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 15501252 - 15501302
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  15501252 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 38692443 - 38692409
Alignment:
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||| ||||||||||||    
T  38692443 attgaaaatgtaaagtgacattcattttaaaacaa 38692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 56556360 - 56556410
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  56556360 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 620376 - 620347
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagt 38  Q
    ||||||||||||||||||||||||||||||    
T  620376 catccgttttaaaataagtgtcgttttagt 620347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 28653111 - 28653074
Alignment:
Q  198 tgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  28653111 tgtattgaaaatgtaaagtgatatttattttgaaacaa 28653074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 54233945 - 54233900
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga 150  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||||    
T  54233945 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 55126739 - 55126674
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||| |||||||||||||||| | ||||||||||| ||||| ||||   |||||||||| ||||    
T  55126739 taatactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaat 55126674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 6462094 - 6462004
Alignment:
Q  150 aaaagtttgagtatttatt---gaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||   || |||||| |||  || ||||||||||| |||||||| |||||||||| |||||| ||||| ||||||    
T  6462094 aaaagtttgagtatttattgaggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 27653910 - 27653858
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||| |||| ||||| ||||||| ||||| ||||| |||||||||||||||||    
T  27653910 catctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaat 27653858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38510169 - 38510205
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttag 37  Q
    |||||| |||||||||||||||| |||||||||||||    
T  38510169 taatactccatccgttttaaaatgagtgtcgttttag 38510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 50072377 - 50072333
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||||||||||||||| ||||||||||| || |||| |||||||    
T  50072377 aagacaaaattaaagttgcattgaaaattgtgtgagaaaaaagtt 50072333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 56422921 - 56423009
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||| ||||| ||||||| ||||| |  | ||||||| |||||| |||  ||||||||||| ||| || ||||| |||||||||||    
T  56422921 tccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaa 56423009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 4392129 - 4391903
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||| ||||| ||||||||||| | ||||| || |||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||  |||||    
T  4392129 tccgtttcaaaatgagtgtcgttttggccaattgcatacaaattaagaaatgaaatgaaataattattagacataacacttttactaaactgcccaagaa 4392030  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa--ttaaattgtattgaaaa 208  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||| ||| |||||||||  | |||||||| | ||||    
T  4392029 aaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaaa 4391930  T
Q  209 tgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||| ||| ||||||||||||    
T  4391929 tgtaaagtgatattcattttaaaacaa 4391903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 15514651 - 15514880
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaa 107  Q
    |||||||||||||||| | ||||||||||||||||| |||| ||| ||||||||  ||||||||||| ||||||||||||| |||||||||  |||  ||    
T  15514651 ccatccgttttaaaatgaatgtcgttttagtcaattgcacataaaataaggaatgtaatgaaataatcattagacataacaattttactaatttgcccaa 15514750  T
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaa-ttgtattg 204  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| ||  |||| ||||||||||| ||||||||    
T  15514751 gaaaa-gacaaacttaaagttgcattgaaaattatgcgagagaaaagttggagtatctattgaaggtaaagttgggagaaaaaaaattaaagttgtattg 15514849  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
     |||||||||||||||||||||| |||||||    
T  15514850 gaaatgtaaagtgacatttatttgaaaacaa 15514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 35099292 - 35099511
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaag 108  Q
    |||||||||||||||  ||||||||||||  |||| ||||||||||||| ||  |||||||||||| |||||||||||||||||||||| | |||| |||    
T  35099292 catccgttttaaaatgggtgtcgttttagcaaattgcacacaaattaagaaacgaaatgaaataatcattagacataacacttttactatactgctcaag 35099391  T
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaa 206  Q
    ||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||| | |||||| ||| ||| ||||||||||| |||||||| |    
T  35099392 aaaaagacaaacttaaaattgcattgaaaattgtgcgagagaaaagtttgagtatttattaagggtaaagttgggagaaaaaaattaaagttgtattgga 35099491  T
Q  207 aatgtaaagtgacatttatt 226  Q
    |||||||| |||||||||||    
T  35099492 aatgtaaaatgacatttatt 35099511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 24 - 235
Target Start/End: Complemental strand, 83516 - 83295
Alignment:
Q  24 aagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taagaaaaag 114  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||| | |          ||||||||||    
T  83516 aagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaag 83417  T
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaa 213  Q
    ||||| |||||||| |||||||||||  | |||||||||||| ||||||||| ||| |||||| |||  ||||||||||||| |||||||||||||||||    
T  83416 acaaacttaaagttgcattgaaaattgcgtgagagaaaagttagagtatttaatgagggtaaagttggaagaaaaaattaaagttgtattgaaaatgtaa 83317  T
Q  214 agtgacatttattttaaaacaa 235  Q
    | ||||||| ||||| ||||||    
T  83316 aatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 16240809 - 16240656
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg 102  Q
    |||| |||||||||| ||||| ||||||||||||| | ||| ||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||  |    
T  16240809 atactccatccgtttcaaaatgagtgtcgttttagcctattgcacacaaattagggaatgaaatgaaataatcattagacataacatttttactaaacag 16240710  T
Q  103 cttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |  |||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  16240709 cccaagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtt 16240656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 3000924 - 3000751
Alignment:
Q  64 aatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtat 163  Q
    ||||||||||  |||||||| ||||||||||||||| |||  |||||||||||||| |||||||| ||||||||||| || |||||||||||| ||||||    
T  3000924 aatgaaataaacattagaca-aacacttttactaaactgcccaagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtat 3000826  T
Q  164 ttattgaaggtaaaatt--gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||| |||| | ||  |||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  3000825 ttattgagggtagagttgggagaaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 36310198 - 36310404
Alignment:
Q  28 gtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagt 127  Q
    ||||||||||||||||  ||||||||||| ||||  ||||||| ||| ||||||| ||||| |||||||||| |||| |||||||| |||||    ||||    
T  36310198 gtcgttttagtcaattgtacacaaattaaagaatggaatgaaacaatcattagac-taacatttttactaaattgctcaagaaaaatacaaac---aagt 36310293  T
Q  128 ttcattgaaaattatgcgagagaaaagtttgagtattt-attgaaggtaaaattgagagaaaaaa--ttaaattgtattgaaaatgtaaagtgacattta 224  Q
    | ||||||||||| |||||||||||| ||||||||||| |||||||||||| ||| |||||||||  | || |||||||| ||||||||| |||||||||    
T  36310294 tgcattgaaaattgtgcgagagaaaaatttgagtattttattgaaggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacattta 36310393  T
Q  225 ttttaaaacaa 235  Q
    |||| ||||||    
T  36310394 ttttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 44854555 - 44854314
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg 102  Q
    |||| |||||||||| ||||| | ||||||||||| ||||| |||| | ||||| ||||| ||||||||||| ||||||||  |||||||||||||| ||    
T  44854555 atactccatccgtttcaaaatgattgtcgttttagccaattgcacatagattaatgaattgaatgaaataatcattagaca--acacttttactaaactg 44854458  T
Q  103 ct---------taagaaaaagacaaaattaaagtttcattgaaaattatgc-gagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaat 192  Q
    |          ||||||||| ||||| |||||||| ||||||||||| | | |||||||||||| ||||||||||||| ||||||||||  ||||||| |    
T  44854457 cccttactttataagaaaaatacaaacttaaagttgcattgaaaattgtactgagagaaaagttggagtatttattgagggtaaaattggaagaaaaagt 44854358  T
Q  193 t-aaattgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | |||||||||||||||||||||||||| || ||||| ||||||    
T  44854357 taaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 46362928 - 46363165
Alignment:
Q  10 atccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------c 103  Q
    |||| ||| ||||| |||||||||| ||   ||| |||||| ||||||||||| ||||||||||| ||||||| ||||| |||||||||| ||      |    
T  46362928 atccatttcaaaatgagtgtcgtttcagcgtattgcacacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttac 46363027  T
Q  104 tt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-t 197  Q
    ||   |||||||| ||||| |||||||| ||||| ||||| || |||||||||||| ||||||||||||| |||||| |||  ||| ||||||||||| |    
T  46363028 tttataagaaaaatacaaatttaaagttgcattgtaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagt 46363127  T
Q  198 tgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  46363128 tgtattgaaaatgtaaagtgacattcattttgaaacaa 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 647514 - 647725
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct--------- 104  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||| ||| |||||||||||| |||||| |||||| |||||||||| |||              
T  647514 gtttcaaaataagtgtcgttttacccaattgcacacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttacttta 647613  T
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    ||||||||||||||| |||||||| ||||||||||| ||  ||||||||||| ||||||||||||| |||||| |||  || ||||||||||| ||||||    
T  647614 taagaaaaagacaaacttaaagttgcattgaaaattctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 647713  T
Q  203 tgaaaatgtaaa 214  Q
    ||||||||||||    
T  647714 tgaaaatgtaaa 647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 31290893 - 31290981
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  31290893 tccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaataattattagacataacacttttactaaa 31290981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 2988630 - 2988763
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaa-aattaaattgta 201  Q
    |||||| |||||||| |||||||| ||||||||||| |||||||||  |||||||||||||||||||| |||||| |||  |||||| ||||||||||||    
T  2988630 taagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaattgta 2988729  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||||||||||||||||| ||||| ||||||    
T  2988730 ttggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 37225617 - 37225749
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaa-aattaaa-ttgtat 202  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||||||||| |||||| |||  |||||| ||||||| ||||||    
T  37225617 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtat 37225716  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||||||||||||||||| ||||| ||||||    
T  37225717 tggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 27483116 - 27483337
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------t 105  Q
    ||||||||| ||||||| ||||| | ||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |          |    
T  27483116 ttttaaaatgagtgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttat 27483215  T
Q  106 aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtatt 203  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||| |||         | |||||| |||  |||||||| ||||| |||||||    
T  27483216 aagaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtatt 27483306  T
Q  204 gaaaatgtaaagtgacatttattttaaaaca 234  Q
    | ||||||||||||||||| ||||| |||||    
T  27483307 ggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 43580712 - 43580474
Alignment:
Q  12 ccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------- 104  Q
    |||||||||||| || | || ||||| ||||| |||||| ||||||||||  ||||||||||| |||| | |||||| |||||||||| |||            
T  43580712 ccgttttaaaatgagcgacgctttagccaattgcacacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttt 43580613  T
Q  105 ----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa-gtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa- 196  Q
        || |||||||||||| |||||||| ||||||||||| || |||| |||| ||| ||||||||||| | |||||| |||  ||| |||||||||||     
T  43580612 tatatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaag 43580513  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  43580512 ttgtattgaaaatgtaaagtgacatttattttgaaacaa 43580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 50420379 - 50420258
Alignment:
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaa 213  Q
    ||||| |||||||| |||||||||||  |||||||||||||| |||||||||||||| ||||| |||  ||||||||||||| ||||||| |||||||||    
T  50420379 acaaacttaaagttgcattgaaaattgcgcgagagaaaagttagagtatttattgaaagtaaagttggaagaaaaaattaaagttgtattaaaaatgtaa 50420280  T
Q  214 agtgacatttattttaaaacaa 235  Q
    | ||||||||||||| ||||||    
T  50420279 aatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 42857010 - 42857098
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  42857010 tccgttttaaaatgagtgtcgttttaggcaattacacacagattaaggaatcaaatgaaataatcattagacataacatttttactaaa 42857098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 38457659 - 38457460
Alignment:
Q  46 acacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc-------tta--agaaaaagacaaaattaaagtttcattgaa 136  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||||||||| |||       |||  ||||||||| ||| ||||| || |||||||    
T  38457659 acacaaattaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaa 38457560  T
Q  137 aattatgcgagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaaca 234  Q
    |||| || |||||||||||| ||||||||||||| |||||| || ||   ||||||||||| |||||||||||||||||| ||| ||| ||||| |||||    
T  38457559 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 2567928 - 2568157
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg----- 102  Q
    |||||||||||||||| | ||||||||||| ||||| |||| | ||||||||||| ||||||||||| |||||| ||||||||||||| ||||||         
T  2567928 ccatccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtcctt 2568027  T
Q  103 -ctt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa- 196  Q
     |||   |||||||||||||| |||||||| ||||||||||| || ||||||||| || ||          | |||||| |||  |||||||| |||||     
T  2568028 actttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaattagaa---------agggtaaagttggaagaaaaaaattaaag 2568118  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2568119 ttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 235
Target Start/End: Complemental strand, 5244784 - 5244585
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ctta--agaaaaagacaaaattaaagtttcattgaa 136  Q
    |||||| |||||| |||| ||||||||||| ||||||||||||||||||| |||| |       ||||  ||||||| ||||| |||||||| |||||||    
T  5244784 cacacatattaagaaattgaatgaaataatcattagacataacacttttattaaagtctctttacttataagaaaaaaacaaacttaaagttgcattgaa 5244685  T
Q  137 aattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||| ||||||||| || ||||||||||||| |||||| |||    ||||||||||| || |||| ||||||||| |||||||| ||||||||||||    
T  5244684 aataatgtgagagaaaaattagagtatttattgagggtaaagttggataaaaaaattaaagttatattaaaaatgtaaggtgacattcattttaaaacaa 5244585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 26965417 - 26965653
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaa 100  Q
    |||||| |||||||||||||||||||||||  ||||| |  | ||||||| |||||| ||| |||||||||||| ||| || ||||| |||||||||||     
T  26965417 taatactccatccgttttaaaataagtgtcactttaggctttgacacacagattaagaaataaaatgaaataatcattggatataacgcttttactaaac 26965516  T
Q  101 tgc---------ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaa 190  Q
    |||          |||||||||||||||||||||||| ||||||||||| || |||||||||||| ||         || |||||| |||  || |||||    
T  26965517 tgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga---------gagggtaaagttggaagaaaaaa 26965607  T
Q  191 attaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||    
T  26965608 attaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 26965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 44648329 - 44648417
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||| ||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  44648329 tccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaa 44648417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 53560900 - 53560664
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ct 104  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||| || || |||   | ||||| | ||||||||||||       ||    
T  53560900 tccgttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaataaagtagttaaatgtcataataattttactaaaataaccttact 53560801  T
Q  105 t---aagaaaaagacaaaattaaagtttcattgaaaatta--tgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-tt 198  Q
    |   |||||||||||||  |||||||| ||||||||||||  || ||||||||||||||||| ||||| || | |||| |||  ||||||||||||| ||    
T  53560800 ttataagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaagttggaagaaaaaattaaagtt 53560701  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | |||| |||||||||  |||||||||||| ||||||    
T  53560700 gcattgtaaatgtaaaacgacatttattttgaaacaa 53560664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 25061930 - 25061839
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||| ||||| ||||||||||||| | ||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25061930 ccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaa 25061839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 4476272 - 4476368
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa 98  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||| | ||||| ||||  ||||||||||| ||||||| |||||||||||||||    
T  4476272 aatactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttactaa 4476368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 42740465 - 42740369
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa 98  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||| | ||||| ||||  ||||||||||| ||||||| |||||||||||||||    
T  42740465 aatactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttactaa 42740369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 32303925 - 32304059
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgc--gagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    |||||||||| |||| |||||| |  |||||||||| ||   |||||||||||||||||||||||||| |||||| |||  || ||||||||||| ||||    
T  32303925 taagaaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 32304024  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||| |||| |||||||    
T  32304025 attgaaaatgtaaagtgacattcatttcaaaacaa 32304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 43687903 - 43688033
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaatt----gagagaaaaaattaaa-t 197  Q
    |||||| |||||||| |||||||||||||||||||  | || |||||||||||| ||||||||||||| |||||| ||    || | ||||||||||| |    
T  43687903 taagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaaaattaaagt 43688002  T
Q  198 tgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||| |||||||||||||||||||||||    
T  43688003 tgtattggaaatgtaaagtgacatttatttt 43688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 54933113 - 54933359
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaat 101  Q
    ||||| |||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||| |||| || || | |   | ||||||| ||||||||||||    
T  54933113 aatactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaat 54933212  T
Q  102 g------ctt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaa 189  Q
           |||   ||||||| |||||| |||||||| ||||||||||| || ||||  |||||||| ||||||||||||| |||||| |||  || ||||    
T  54933213 aaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaa 54933312  T
Q  190 aattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||| ||| |||| ||||||||||||||||| ||||| ||||||    
T  54933313 aattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 43599466 - 43599555
Alignment:
Q  10 atccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||||||| ||||||||||||   |||| |||| |||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  43599466 atccgttttaaaatgagtgtcgttttatataattgcacataaattaaggaatgaaatgaaataatcattagacataatacttttactaaa 43599555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 43600218 - 43600337
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaa 207  Q
    |||| |||||| ||||||||  |||| ||||| || |||||||||||  ||||||||||||| |||||| |||  ||||||||||||| |||||||||||    
T  43600218 aaaatgacaaatttaaagttatattggaaattgtgtgagagaaaagta-gagtatttattgagggtaaagttggaagaaaaaattaaaattgtattgaaa 43600316  T
Q  208 atgtaaagtgacatttatttt 228  Q
    ||||||||| |||||||||||    
T  43600317 atgtaaagtaacatttatttt 43600337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 20512413 - 20512651
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ct 104  Q
    ||||||||||||| ||||||| ||||||||||| |||||| |||||| |||| ||| ||||| | |   | |||| || ||||||||||||       ||    
T  20512413 tccgttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttact 20512512  T
Q  105 t---aagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa- 196  Q
    |   |||||||| ||||| ||||||||  |||||||||| || ||||  |||||||| |||||||||||||||||||| |||  ||| ||||| |||||     
T  20512513 ttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaatttaaag 20512612  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||||||||||||||| |||||| ||||| ||||||    
T  20512613 ttgcattgaaaatgtaaagcgacattcattttgaaacaa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 22731031 - 22730924
Alignment:
Q  130 cattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattt 227  Q
    |||||||| || || ||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||| ||||||||| ||||||| | ||    
T  22731031 cattgaaatttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtt 22730932  T
Q  228 taaaacaa 235  Q
    ||||||||    
T  22730931 taaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 40049108 - 40048956
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc------- 103  Q
    ||||||||||||| ||||||| |||||  | || ||||| |||||||||||  ||||||||||| ||||||||||||||||||| |||| |||           
T  40049108 tccgttttaaaattagtgtcgctttagctatttgcacacgaattaaggaatggaatgaaataatcattagacataacacttttattaaattgcctttact 40049009  T
Q  104 --ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
       ||||||||||||||| |||||||| |||||||||||||  ||||||||||||    
T  40049008 ttataagaaaaagacaaatttaaagttgcattgaaaattat--gagagaaaagtt 40048956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 43169467 - 43169333
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgt 200  Q
    |||||| |||||||| ||||||||  |||||||||| || ||||||  ||||||||||||||||||||||||||| || ||   ||||||||||| ||||    
T  43169467 taagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaagaaaaaaattaaagttgt 43169368  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||| ||||||| ||||| ||||||    
T  43169367 attggaaatgtaaaatgacattcattttgaaacaa 43169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 235
Target Start/End: Original strand, 36771529 - 36771721
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattga 135  Q
    |||||| |||||| |||  ||||||||||||||||||||||| | |||||||||| ||||         ||||||||||||||| |||||||| ||||||    
T  36771529 cacacatattaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattga 36771628  T
Q  136 aaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaac 233  Q
    ||||| || |||||||||||| ||         || | |||| |||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  36771629 aaattgtgtgagagaaaagttgga---------gaggataaagttgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaac 36771719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 38165587 - 38165668
Alignment:
Q  18 taaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||| ||||||||||||||||||| || ||| ||||||||||  ||||||||||| |||| |||||||||||||||||||    
T  38165587 taaaatgagtgtcgttttagtcaattgcatacagattaaggaatgtaatgaaataatcattaaacataacacttttactaaa 38165668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 27027860 - 27027732
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaa-attgagagaaaaaattaaa-ttgtattgaa 206  Q
    ||||||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||| | | ||||  ||||   ||||||||||| |||||||| |    
T  27027860 aaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattgga 27027761  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| ||||||| ||||| ||||||    
T  27027760 aatgtaaattgacattaattttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 25722482 - 25722608
Alignment:
Q  106 aagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaat-tgagagaaaaaattaaa-ttgta 201  Q
    ||||| |||||||| |||||||| ||||||||||| || ||||||  |||||| ||||||||||| | |||||| | |||   ||||||||||| |||||    
T  25722482 aagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagtatgaagaaaaaaattaaagttgta 25722581  T
Q  202 ttgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||||||||||||||| |||||    
T  25722582 ttgaaaatgtaaagtgacattcatttt 25722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 42791533 - 42791442
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||| ||||| |||||| |||||| ||||| ||| || ||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  42791533 ccatccgtttcaaaatgagtgtcattttagccaattgcacgcatattaaggaatgtaatgaaataatcattagacataatacttttactaaa 42791442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 19552662 - 19552539
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaatt--aaattgtat 202  Q
    ||||||||| |||||||||||||| ||||||||||| || |||||||||||| ||         || |||||| |||  ||||||||||  || ||||||    
T  19552662 taagaaaaatacaaaattaaagttgcattgaaaattctgtgagagaaaagttaga---------gagggtaaagttggaagaaaaaatttaaagttgtat 19552572  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||| ||||||||||||    
T  19552571 tgaaaatgtaaagtgacattcattttaaaacaa 19552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 51381853 - 51381720
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattat----gcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaa-ttgta 201  Q
    ||||||||||| |||||||| ||||||||||| |    | ||||||||| || |||||||||| || |||||| ||   ||| ||||||||||| |||||    
T  51381853 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaaaaattaaagttgta 51381754  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||||||||||||||||||||||| ||||||    
T  51381753 ttgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 22414946 - 22414761
Alignment:
Q  52 attaaggaattaaatgaaataattattagacataacacttttactaaaatgctta--------agaaaaagacaaaattaaagtttcattgaaaattatg 143  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| |||| | | ||        |  |||||| ||| |||||||| ||||||||||| ||    
T  22414946 attaagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataagaaaagagaaacttaaagttgcattgaaaattgtg 22414847  T
Q  144 cgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
      ||||||  | |||||||||||||||||||||| |||  ||| ||||||||||| || |||| |||||||||||||||||| |||||    
T  22414846 taagagaa--ggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcatttt 22414761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 2662447 - 2662562
Alignment:
Q  47 cacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc---------ttaagaaaaagacaaaattaaagtttcattgaaa 137  Q
    |||| ||||| |||| |||||||||||| |||||||||||||||||||||||| |||          ||||||||||||||| |||||||| ||||||||    
T  2662447 cacagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaaa 2662546  T
Q  138 attatgcgagagaaaa 153  Q
    ||| || |||||||||    
T  2662547 attgtgtgagagaaaa 2662562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 42007082 - 42007212
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaatt--atgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgta 201  Q
    |||||| |||||||| |||||||| |||||||||||  |||  ||| ||||||||||||||||||| | | |||| || | | ||||| ||||| |||||    
T  42007082 taagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtttaaaaaaaaatttaaaattgta 42007181  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||||  |||||| |||||||||    
T  42007182 ttgaaaatgtaaaacgacattcattttaaaa 42007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 43736787 - 43736877
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||| ||||| ||||||| ||||| ||||| |||| ||||| ||| || |||||||||||| |||||| |||||||||||||||||    
T  43736787 ccatccgtttcaaaatgagtgtcgctttagccaattgcaca-aaatttagggatgaaatgaaataatcattagatataacacttttactaaa 43736877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 54261548 - 54261414
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||| ||||| ||||||||  |||||||||| || ||||||  |||||| ||||||||||||| |||||| |||  || ||||||||||| |||     
T  54261548 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 54261449  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||| ||| || ||||| ||||||    
T  54261448 attgaaaatgtaaagcgacgttcattttgaaacaa 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 232
Target Start/End: Original strand, 1340866 - 1341071
Alignment:
Q  29 tcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ctt---aagaaaaagacaaa 119  Q
    |||||||||  |||| |||| | ||||| ||||  ||||||||||| |||||||||||||||||| ||||| ||      |||   ||||||||||||||    
T  1340866 tcgttttagcaaattgcacatagattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaaa 1340965  T
Q  120 attaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtg 217  Q
     |||||||| ||||||||||| || |||||||||||| ||         || |||||  |||  || ||||||||||| |||||||||||||||||||||    
T  1340966 cttaaagttgcattgaaaattgtgtgagagaaaagttgga---------gagggtaacgttggaagaaaaaaattaaagttgtattgaaaatgtaaagtg 1341056  T
Q  218 acatttattttaaaa 232  Q
    ||||| |||||||||    
T  1341057 acattcattttaaaa 1341071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 34059996 - 34059875
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtat 202  Q
    ||||||||||||||  |||||||| ||||||||||| ||||||||||||||| |||         | |||||| |||| |||||||| ||||| ||||||    
T  34059996 taagaaaaagacaa--ttaaagttgcattgaaaattgtgcgagagaaaagttggag---------agggtaaagttgaaagaaaaaaattaaagttgtat 34059908  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||| ||||||| ||||||||||||    
T  34059907 tgaaaatgtaaaatgacattcattttaaaacaa 34059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 44645468 - 44645344
Alignment:
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgc--gagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtatt 203  Q
    |||||||| ||| |||||||| ||||||||||||||   |||||||||||| ||||||||||||| |||||| |||  || ||||||||||| ||| ||     
T  44645468 gaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcatg 44645369  T
Q  204 gaaaatgtaaagtgacatttatttt 228  Q
    | |||||||||| |||||| |||||    
T  44645368 ggaaatgtaaagcgacattcatttt 44645344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 41287255 - 41287078
Alignment:
Q  68 aaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttg 158  Q
    ||||||| |||||||||||||||||||||||| |||          || ||||||  |||| |||||||| ||||||||||| || |||| ||  |||||    
T  41287255 aaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgagaaaatggtttg 41287156  T
Q  159 agtatttattgaaggtaaaattgagag---aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||| || ||| |||  ||   ||||||||||| |||||||| ||||||||||||||||  |||||||||    
T  41287155 agtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccattttaaaa 41287078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 790306 - 790149
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| ||||| ||||||| |  | ||||||| |||||| |||  ||||||||||| |||  | ||||| ||||||||||| |||           
T  790306 tccgttttaaaattagtgttgttttaggctttgacacacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgcccttact 790207  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttga 159  Q
       |||||||||| ||||||||||||| ||||| ||||| || |||||||||||||||    
T  790206 ttataagaaaaagtcaaaattaaagttgcattggaaattgtgtgagagaaaagtttga 790149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 4476437 - 4476502
Alignment:
Q  169 gaaggtaaaattgagagaaaaaa-ttaaattg-tattgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||||| |||||||| ||||| || |||| ||||||||||||||||||||||||||||    
T  4476437 gaaggtaaaattgaaagaaaaaaattaaaatgatattaaaaatgtaaagtgacatttattttaaaa 4476502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 27039454 - 27039326
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg-agagaaaaaattaaa-ttgtattgaa 206  Q
    ||||||||||| |||||||| ||||||||||| || ||||| |||||| ||||||||||| |   |||| ||| | | ||||||||||| ||||| ||||    
T  27039454 aaaaagacaaatttaaagttgcattgaaaattgtgtgagaggaaagttggagtatttattaagaataaagttgaaaaaaaaaaattaaatttgtaatgaa 27039355  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| ||  ||| ||||| ||||||    
T  27039354 aatgtaaattgcaattaattttgaaacaa 27039326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 45095602 - 45095555
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  45095602 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 45095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 49470922 - 49470788
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgc--gagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgt 200  Q
    |||||| |||||||| |||||| | ||||||||||| ||   |||||||||||| ||||||||||||  | |||| || ||   ||||||||||| ||||    
T  49470922 taagaataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaattaaagttgt 49470823  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||  |||||| ||||| ||||||    
T  49470822 attgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 53716241 - 53716085
Alignment:
Q  8 ccatccgtttt-aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct-- 104  Q
    ||||||||||| ||||| ||||||| ||||| |  | ||||| |||||||| ||| |||||||||||| ||| || ||||| ||||||||||| ||||      
T  53716241 ccatccgttttcaaaatgagtgtcgctttagactttgacacataaattaagaaatgaaatgaaataatcattggatataacgcttttactaaactgctct 53716142  T
Q  105 -------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
           ||||||||||||  |||||||||| ||||||||| | || ||||||||||||    
T  53716141 tactttataagaaaaagac--aattaaagttgcattgaaaactgtgtgagagaaaagtt 53716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 36541617 - 36541497
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaa-aaattaaa-ttgtattgaaa 207  Q
    |||||||| |||||||| ||| ||||||| || ||||||  |||||| || |||||||||| |||||| |||  ||||| ||| |||| |||||||||||    
T  36541617 aagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaataaagtaaagttgtattgaaa 36541518  T
Q  208 atgtaaagtgacatttatttt 228  Q
    |||||||  |||||| |||||    
T  36541517 atgtaaaacgacattcatttt 36541497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 45095764 - 45095671
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacac-ttttactaaaatgc 103  Q
    ||||||| ||||| | ||||| |||||  |||| ||| || ||||||||||  ||||||||||| |||| ||||||||| ||||||||||||||    
T  45095764 tccgtttcaaaatgattgtcgctttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacacattttactaaaatgc 45095671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 13756790 - 13756838
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaa 56  Q
    |||||||||| ||||| || ||||||||||| |||||||||||||||||    
T  13756790 ccatccgtttcaaaatgagcgtcgttttagttaattacacacaaattaa 13756838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 51381963 - 51381899
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    |||| ||||| ||||| ||||||| ||||||||||| |||||| |||||||||| |||| |||||    
T  51381963 ccattcgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaata 51381899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 51482167 - 51482115
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||||| ||||||||||||  |||||||||||| |||||||||| ||||    
T  51482167 gttttaaaatgagtgtcgttttaaacaattacacacagattaaggaatgaaat 51482115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 35239492 - 35239441
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||||||||||||| |||||||| || |||||||| || ||||||||||||    
T  35239492 taagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagagaaaagtt 35239441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 38277982 - 38277931
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||    
T  38277982 ttttaaaatgagtgtcgttttagccaattgcactcaaattaaggaatgaaat 38277931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 43169562 - 43169515
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||| |||||||||||||||||||||||| | |||||||||| ||||    
T  43169562 aaaattagtgtcgttttagtcaattacacaaagattaaggaatgaaat 43169515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 47895260 - 47895315
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||||||| ||||||| ||||| ||||| |||||| |||||||||| ||||    
T  47895260 tccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 47895315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 790145 - 790095
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  790145 aaaaaattaaagttgtattggaaatgtaaagtgacattaattttgaaacaa 790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 43687800 - 43687838
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacac 49  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  43687800 tccgtttcaaaataagtgtcgttttagtcaattgcacac 43687838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 44648505 - 44648555
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||||||    
T  44648505 aaaaaaataaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 44676455 - 44676405
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||    
T  44676455 tccgtttcaaaatgagtgttgttttagccaattacacacatattaaggaat 44676405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 30186332 - 30186365
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaa 41  Q
    |||||||||||||||| |||||||||||||||||    
T  30186332 ccatccgttttaaaatgagtgtcgttttagtcaa 30186365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 42740299 - 42740234
Alignment:
Q  169 gaaggtaaaattgagagaaaaaa-ttaaattg-tattgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||||  |||||||| ||||| || |||| ||||| ||||||||||||||||||||||    
T  42740299 gaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttattttaaaa 42740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 53716078 - 53716029
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaaca 234  Q
    ||||||||||| |||||||| ||||||||||| ||||| |||||||||||    
T  53716078 aaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 3152726 - 3152778
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||||| ||||||||||||  ||||| |||||| |||||||||| ||||    
T  3152726 gttttaaaatgagtgtcgttttaaccaattgcacacatattaaggaatgaaat 3152778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 6084779 - 6084839
Alignment:
Q  44 acacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct 104  Q
    |||||||||||||  ||| |||||||||||| ||||||||| ||| ||||| |||| ||||    
T  6084779 acacacaaattaaaaaatgaaatgaaataatcattagacattacatttttattaaactgct 6084839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 25061767 - 25061703
Alignment:
Q  173 gtaaaattgagagaaaaaa-ttaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| ||| ||||||||| ||||| |||||||| |||||||||||| |||| ||||||||||||    
T  25061767 gtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttaaaacaa 25061703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 27027960 - 27027883
Alignment:
Q  20 aaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||||||||||  ||||| |||||| |||||| |||  ||||||  ||| |||| |||||||||||||| ||||    
T  27027960 aaataagtgtcgttttaaccaattgcacacatattaagtaatggaatgaa--aatcattaaacataacacttttaataaa 27027883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 30186409 - 30186373
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacac 47  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  30186409 tccgttttaaaatgagtgtcgttttagccaattacac 30186373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 33193950 - 33194002
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||| ||||| ||||||| ||||||||||| |||||| |||||||||| ||||    
T  33193950 gtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaat 33194002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 35557660 - 35557724
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||| || ||||||| ||||||| ||||||||||| || || |||||| ||||| |||||||||    
T  35557660 aatactccctccgtttcaaaataaatgtcgttttagccatttgcacacagattaatgaattaaat 35557724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 41287412 - 41287460
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaagga 59  Q
    ||||||| ||||| ||||||| ||||| |||||||||||| ||||||||    
T  41287412 tccgtttcaaaatgagtgtcgctttagccaattacacacatattaagga 41287460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 43599855 - 43599903
Alignment:
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||||||| |||||||| |||| |||||| || ||||||||||||    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagtt 43599903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 44645576 - 44645520
Alignment:
Q  10 atccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||| ||||||| |||||||||||  ||||||||||| ||||| |||| ||||    
T  44645576 atccgtttcaaaataaatgtcgttttagctaattacacacatattaaagaatgaaat 44645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 51397961 - 51397997
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttag 37  Q
    |||||| |||||||||||||||| |||||||||||||    
T  51397961 taatactccatccgttttaaaatgagtgtcgttttag 51397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 6e-63; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 30627315 - 30627089
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||||||||| |||||||||||||  |||| |||||||||||| |||| |||||||||||| |||||| ||||||||||||||||| ||   |||||    
T  30627315 tccgttttaaaatgagtgtcgttttagataattgcacacaaattaatgaatgaaatgaaataatcattagatataacacttttactaaagtgtccaagaa 30627216  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-ttgtattgaaaa 208  Q
    ||| ||||| |||||||| ||||||||||| |  |||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||    
T  30627215 aaaaacaaatttaaagttgcattgaaaattgtttgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaa 30627116  T
Q  209 tgtaaagtgacatttattttaaaacaa 235  Q
    | |||||||||||||||||| ||||||    
T  30627115 tataaagtgacatttattttgaaacaa 30627089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 27 - 235
Target Start/End: Complemental strand, 8052552 - 8052343
Alignment:
Q  27 tgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaag 126  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| |||  |||||||||  |||||    
T  8052552 tgtcgttttagtcaattgcacacaaattaagaaatgaaatgaaataatcattagacataacacttttattaaaatgctcaagtgaaagacaaacctaaag 8052453  T
Q  127 tttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttat 225  Q
    || ||||||||||| || ||||||| |||| ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| |||||||||||| ||    
T  8052452 ttgcattgaaaattgtgggagagaatagttggagtatttattgagggtaaaattgggagaaaaaattaaagttgtattagaaatataaagtgacattcat 8052353  T
Q  226 tttaaaacaa 235  Q
    ||||||||||    
T  8052352 tttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 31275560 - 31275796
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||| ||||||||||| ||||||| ||||| |||||| |||||||||  |||||||||||  ||||||| |||||||||||| ||| |||           
T  31275560 tccgtttcaaaataagtgttgttttagccaattgcacacagattaaggaaagaaatgaaataaccattagacgtaacacttttaccaaactgcccttgtt 31275659  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-tt 198  Q
       || |||||||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||||||| |||||| |||  ||| ||||||||||| ||    
T  31275660 ttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagtt 31275759  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| ||||||||||||||||| ||||| ||||||    
T  31275760 gtattggaaatgtaaagtgacattcattttgaaacaa 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 12828608 - 12828835
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taaga 109  Q
    ||||| || |||||| ||| ||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |||          |||||    
T  12828608 aaaatgagcgtcgttgtagccaattgcacacaaattaatgaatgaaatgaaataatcattagacataacacttttactaaactgcccttactttataaga 12828707  T
Q  110 aaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaa 207  Q
    |||||||||  |||||||| ||||||||||| || ||||||||||||  |||||||||||| |||||| |||  || ||||||||||| |||||||| ||    
T  12828708 aaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 12828807  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| ||| ||||| ||||||    
T  12828808 atgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 235
Target Start/End: Complemental strand, 29915742 - 29915539
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct----------taagaaaaagacaaaattaaagtttcattg 134  Q
    |||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||| |||           |||||||||||||||  ||||||| |||||    
T  29915742 cacacatattaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcattg 29915643  T
Q  135 aaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaa 231  Q
     ||||| || |||||||||||| ||||||||||||| |||||| |||  ||| ||||||||||| |||||||| ||||||||||||||||| ||||| ||    
T  29915642 gaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 29915543  T
Q  232 acaa 235  Q
    ||||    
T  29915542 acaa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 29927388 - 29927205
Alignment:
Q  64 aatgaaataattattagacataacacttttactaaaatg------ctt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaag 154  Q
    ||||||||||| ||||||||||||||||||||||| ||       |||   |||||||||||||| |||||||| ||||||||| ||   ||||||||||    
T  29927388 aatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaaactacatgagagaaaag 29927289  T
Q  155 tttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||||||||||||| |||||| |||  ||| ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  29927288 ttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 11785129 - 11785242
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaa 207  Q
    ||||||| ||| ||||||||  |||||||||| || |||||||||||| || |||||||||| |||||| |||  ||||||||||||| |||||||| ||    
T  11785129 aaaaagataaatttaaagttgtattgaaaattgtgtgagagaaaagttagaatatttattgagggtaaagttggaagaaaaaattaaagttgtattggaa 11785228  T
Q  208 atgtaaagtgacat 221  Q
    ||||||||||||||    
T  11785229 atgtaaagtgacat 11785242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 26669120 - 26669245
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagaga-aaaaattaaa-ttgtat 202  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||  |||||||| | |||| |||   || |||||||||| ||||||    
T  26669120 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtat 26669219  T
Q  203 tgaaaatgtaaagtgacatttatttt 228  Q
    || |||| |||||||||||| |||||    
T  26669220 tggaaatataaagtgacattcatttt 26669245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 4123878 - 4124009
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    |||| |||| ||||| ||||| || ||||||||||| || || ||||||||| ||||||||||||| |||||| |||| || ||||||||||| ||||||    
T  4123878 taaggaaaaaacaaacttaaa-ttgcattgaaaattgtgtgaaagaaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtat 4123976  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | |||||||||||||||||| ||||| ||||||    
T  4123977 taaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 6140689 - 6140598
Alignment:
Q  145 gagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||| ||||||||||||||||||| |||  ||||||||||||| ||| |||| |||||||||| |||||| ||||||||||||    
T  6140689 gagagaaaagtttaagtatttattgaaggtaaagttggaagaaaaaattaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 25932867 - 25932626
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg--ctt 105  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||| ||| |||| || || |||   | |||| || ||||||||||||   |||    
T  25932867 ccatccgttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataaagtagttaaatgtcatagcaattttactaaaataacctt 25932768  T
Q  106 a------agaaa-aagacaaaattaaagtttcattgaaaattatgcgagag--aaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaatta 194  Q
    |      || || |||||||| |||||||| ||||||||||| || |||||  ||||||||||||||||||||| | |||| ||   ||| |||||||||    
T  25932767 actttatagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaagttagaagaaaaaaaatta 25932668  T
Q  195 aa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||| |||||||||||||||  ||||| ||| ||||||||    
T  25932667 aagttgcattgaaaatgtaaagccacattcattataaaacaa 25932626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 4132042 - 4132129
Alignment:
Q  150 aaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||| ||||||||||||| |||||| |||| |||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  4132042 aaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 17345156 - 17345290
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagagaaaaa-attaaa-ttgt 200  Q
    |||||| |||||||| || ||||| ||||||||||| || ||||  |||||||| ||||||||||||| |||||| |||  ||||||| |||||| ||||    
T  17345156 taagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaatattaaagttgt 17345255  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||  ||||||||||||| ||| ||||||||||||    
T  17345256 attagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 30626956 - 30626867
Alignment:
Q  148 agaaaagtttgagtattt-attgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||| |||||   |||| |||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||    
T  30626956 agaaaagtttgagtattttattgagaataaagttgagagaaaaaattaaagttgtattgaaaatgtaaagtaatatttattttgaaacaa 30626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 34439327 - 34439567
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc------- 103  Q
    ||||||||||||| |||||||||||||    | ||||| |||||||| ||| |||||||||||| |||||| |||||| ||||| |||| |||           
T  34439327 tccgttttaaaatgagtgtcgttttaggtgttgacacataaattaagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttat 34439426  T
Q  104 ---ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgag-----agaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaa 195  Q
        |||||||||||||||  ||||||| ||||| ||||| ||  ||     ||||||||| |||||| ||||||||||||| |||  ||||| ||| ||    
T  34439427 tttataagaaaaagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaagaaagaatgaa 34439526  T
Q  196 a-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | |||||||| ||||||||| ||||||| ||||| ||||||    
T  34439527 agttgtattggaaatgtaaaatgacattcattttgaaacaa 34439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 32258842 - 32258720
Alignment:
Q  117 aaaattaaagtttcattgaaaattatgcgagag-aaaagtttgagtatttattgaagg-taaaattgagag-aaaaaattaaa-ttgtattgaaaatgta 212  Q
    |||||||||||| ||||||||||| || ||||| ||||||| |||||||| ||  ||| |||| |||  || ||||||||||| ||||||||||||||||    
T  32258842 aaaattaaagttgcattgaaaattgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgta 32258743  T
Q  213 aagtgacatttattttaaaacaa 235  Q
    |||||||||| ||||| ||||||    
T  32258742 aagtgacattcattttgaaacaa 32258720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 34576675 - 34576542
Alignment:
Q  106 aagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgta 201  Q
    ||||| |||||||| |||||||| ||||||||||  | || ||||||||||||  |||||||||||| | |||| |||  || ||||||||||| |||||    
T  34576675 aagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaagaaaaaaattaaagttgta 34576576  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||||||||| ||| ||| ||||||||||||    
T  34576575 ttggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 23936606 - 23936735
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaatt--aaattgtat 202  Q
    ||||||||| ||||| |||||||| ||||||||||  || |||||||| ||| |||||| |||||| |||||| |||  |||||||| |  || ||| ||    
T  23936606 taagaaaaaaacaaatttaaagttgcattgaaaat--tgtgagagaaaggttggagtatatattgagggtaaagttggaagaaaaaaatgaaagttgcat 23936703  T
Q  203 tgaaaatgtaaagtgacatttattttaaaaca 234  Q
    |||||||||||||| ||||| ||||| |||||    
T  23936704 tgaaaatgtaaagtaacattcattttgaaaca 23936735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 6143174 - 6143082
Alignment:
Q  145 gagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| |||||||| ||||||||||||||||||| |||  || ||||||||||| ||| |||| ||||||||| ||||||| ||||||||||||    
T  6143174 gagaaaaaagtttaagtatttattgaaggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 10494788 - 10494916
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaa 206  Q
    ||||||||||| || ||||| ||||||||||| |  |||||||||||| || ||||||||   || ||| |||| || ||||||||||| ||| |||| |    
T  10494788 aaaaagacaaactttaagttgcattgaaaattgtatgagagaaaagttggactatttattttgggcaaagttgaaagaaaaaaattaaagttgaattgga 10494887  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| ||||||| ||||||||||||    
T  10494888 aatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 1924696 - 1924818
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtatt 203  Q
    |||| |||| |||||||||||||| ||||||||||| || |||||||||||| |||         | ||| || |||| | ||||||||||| |||||||    
T  1924696 taaggaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggag---------agggtgaagttgaaaaaaaaaattaaagttgtatt 1924786  T
Q  204 gaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| ||||||| ||||||||||||    
T  1924787 gaaaatgtaaaatgacattcattttaaaacaa 1924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 3016003 - 3015921
Alignment:
Q  145 gagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||| || ||||||||||||| ||  ||||||| |  |||||||||| |||||||||||||||||||||||||| |||||    
T  3016003 gagagaaaaattagagtatttattgagggccaaattgaaa--aaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 3015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 19689870 - 19689988
Alignment:
Q  117 aaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgtattgaaaatgtaaagt 216  Q
    ||||||||||||  ||||| |||| || |||||||||||| |||||||| || |   |||| |||  |||||| || || |||||||  |||||||||||    
T  19689870 aaaattaaagttgtattgacaattgtgtgagagaaaagttggagtatttttttagattaaagttggaagaaaatataaagttgtattagaaatgtaaagt 19689969  T
Q  217 gacatttattttaaaacaa 235  Q
     ||||| ||||||||||||    
T  19689970 aacattcattttaaaacaa 19689988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 10520742 - 10520794
Alignment:
Q  184 agaaaaaattaa-attgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||  ||||||||||||||  ||||||||||||||||||||||||    
T  10520742 agaaaaaattattattgtattgaaaattgaaagtgacatttattttaaaacaa 10520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24163622 - 24163694
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacaca-aattaaggaattaaatgaaata 72  Q
    |||||| |||||||||||||| | ||||||||||||| ||||| |||||| ||||||| ||| |||| |||||    
T  24163622 taatactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataaaata 24163694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 34513575 - 34513623
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaag 57  Q
    |||||||||||||||||||||||||||||  |||| |||||| ||||||    
T  34513575 catccgttttaaaataagtgtcgttttagctaattgcacacatattaag 34513623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 26189636 - 26189506
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcg--agagaaaagtttgagtatttattgaaggtaaaattgagagaaaaa-attaaa-ttgtattg 204  Q
    ||||| ||||| |||||||| ||||||||||| || |  |||||||| || ||||||||||||| |||||| |||  ||||||| |||||| ||| ||||    
T  26189636 aaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaatattaaagttgcattg 26189537  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
     |||||||||   ||||| ||||| ||||||    
T  26189536 gaaatgtaaaacaacattcattttgaaacaa 26189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 29713316 - 29713375
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||| || ||||||||||||| ||||||| ||||||||||| |||||  ||||||||||    
T  29713316 aatactccttccgttttaaaatgagtgtcgctttagtcaattgcacacgtattaaggaat 29713375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 19689819 - 19689859
Alignment:
Q  64 aatgaaataattattagacataacacttttactaaaatgct 104  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  19689819 aatgaaataattattagatataacaattttactaaactgct 19689859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 9e-62; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 38982071 - 38982299
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaag 108  Q
    ||||||||| ||||| | ||||||||||| ||||| ||||||||||||||||| ||||||||||||  | |||| ||||||||||| |||| |||  |||    
T  38982071 catccgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataatcttaagacgtaacacttttattaaactgcccaag 38982170  T
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaa 206  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||| |||||||| |    
T  38982171 aaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgga 38982270  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    ||| |||||||||||| ||||||||||||    
T  38982271 aatataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4371594 - 4371362
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaa 100  Q
    |||||| || ||||||| ||||| ||||||||||||   |||| |||||||||||||||||  ||||||||||| |||||||||| |||||||||||||     
T  4371594 taatactccctccgtttcaaaatgagtgtcgttttaactaattgcacacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaac 4371495  T
Q  101 tgcttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-tt 198  Q
    ||| ||||||||||||||    |||||| ||||||||||| || |||||||||||||||||||||||||| |||||| ||  ||| ||||||||||| ||    
T  4371494 tgcctaagaaaaagacaa----aaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagtttggagaaaaaaattaaagtt 4371399  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| |||||||||||||| || ||||| ||||||    
T  4371398 gtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 13066931 - 13066712
Alignment:
Q  18 taaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagaca 117  Q
    |||||| | ||| ||||||| ||||| || |||||||||||||| |||||||||||| |||||||| ||||||||||||||| || | ||||||| || |    
T  13066931 taaaatgaatgttgttttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacacaacacttttactaaactggtcaagaaaaggaaa 13066832  T
Q  118 aaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtattgaaaatgtaaag 215  Q
    ||  ||||||| ||||||||||| ||| ||||||||||| ||||||||||||| |||||| || || | ||||||||||| |||||||| |||||||||     
T  13066831 aatctaaagttgcattgaaaattgtgcaagagaaaagttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaa 13066732  T
Q  216 tgacatttattttaaaacaa 235  Q
    ||||||| ||||| ||||||    
T  13066731 tgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 12992280 - 12992063
Alignment:
Q  18 taaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagaca 117  Q
    |||||| | ||| ||||||| ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||||||| || | ||||||| || |    
T  12992280 taaaatgaatgttgttttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaactggtcaagaaaaggaaa 12992181  T
Q  118 aaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagt 216  Q
    ||  ||||||| ||||||||||| ||| ||||||||||| ||||||||||||| | |||| ||| || ||||||||||| |||||||  ||||||||| |    
T  12992180 aatctaaagttgcattgaaaattgtgcaagagaaaagttggagtatttattgaggataaagttg-gaaaaaaaattaaagttgtattagaaatgtaaaat 12992082  T
Q  217 gacatttattttaaaacaa 235  Q
    |||||| ||||| ||||||    
T  12992081 gacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 166568 - 166803
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||| ||||| |||||||  |||| ||||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||||||| |||           
T  166568 tccgtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgta 166667  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttg 199  Q
       || |||||||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||||||| |||||| |||  || ||||||||||| |||    
T  166668 ttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttg 166767  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| ||||||||||||||||| ||||| ||||||    
T  166768 tattggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 34171294 - 34171163
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtatt 203  Q
    |||||| |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||  | ||||||||||| |||||||    
T  34171294 taagaacaagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagttggaaaaaaaaattaaagttgtatt 34171195  T
Q  204 gaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||| ||||||||||||    
T  34171194 gaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 4742188 - 4742421
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa--aatgct------- 104  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||||||| || ||||||||||||||||||||  ||  ||           
T  4742188 gttttaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgtttta 4742287  T
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgta 201  Q
    || |||||| ||||| ||||||||  |||||||||| || |||| ||||||| ||||||||||||| |||||| |||  ||| ||||||||||| |||||    
T  4742288 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgta 4742387  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||  |||| |||||||||||| ||||| ||||||    
T  4742388 ttagaaatataaagtgacattcattttgaaacaa 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 4751452 - 4751685
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa--aatgct------- 104  Q
    |||||||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||| |||||||||||||||||||||||  ||  ||           
T  4751452 gttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgtttta 4751551  T
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgta 201  Q
    || |||||| ||||| ||||||||  |||||||||| || |||| ||||||| ||||||||||||| |||||| |||  ||| ||||||||||| |||||    
T  4751552 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgta 4751651  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||  |||| |||||||||||| ||||| ||||||    
T  4751652 ttagaaatataaagtgacattcattttgaaacaa 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 36660656 - 36660426
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg--ct------- 104  Q
    |||| ||||| ||||||| |||||  |||| |||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||  ||           
T  36660656 gtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgtccttacttta 36660557  T
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    ||||||||||||||| ||||||||  ||  |||||  || |||||||||| | ||||||||||||| |||||| |||  || ||||||||||| ||||||    
T  36660556 taagaaaaagacaaacttaaagttgtataaaaaat--tgtgagagaaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 36660459  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||| ||||| ||||||    
T  36660458 tgaaaatgtaaagtgacattcattttgaaacaa 36660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 28640241 - 28640084
Alignment:
Q  76 attagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggta 175  Q
    ||||||||||||| |||||||||| |||  || ||||||||||| ||||||||  |||||||||| | |||||||||||||  |||||||||||| ||||    
T  28640241 attagacataacatttttactaaattgcccaa-aaaaagacaaacttaaagttgtattgaaaattgttcgagagaaaagttgaagtatttattgagggta 28640143  T
Q  176 aaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    || ||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  28640142 aagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttattttaaaa 28640084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 15400406 - 15400174
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| |||||||||||||    |  |||||| |||||  |||| |||||||||||||||||| ||||||||||||||||||| |           
T  15400406 tccgttttaaaatgagtgtcgttttaggtgttggcacacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttac 15400307  T
Q  105 ----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-tt 198  Q
        ||||||||||  ||| |||||||||||||| ||||| |  |||||||||||||||||||||||||| | |||| |||  |||| ||||||||| ||    
T  15400306 tttataagaaaaaggaaaacttaaagtttcattggaaattgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagtt 15400207  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaa 231  Q
    |||||| ||||||||||||||||| ||||||||    
T  15400206 gtattggaaatgtaaagtgacattcattttaaa 15400174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 8960954 - 8961111
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg-ct----- 104  Q
    ||||||||||||| |||||||||||| ||||||||||| | ||||||||||  ||| ||||||| |||||||||||||||||||||||| || ||         
T  8960954 tccgttttaaaatgagtgtcgttttactcaattacacatatattaaggaatataataaaataatcattagacataacacttttactaaactgtcttattt 8961053  T
Q  105 --taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgag 160  Q
      ||||||||||| ||| |||||||| || |||||||| || ||||||||||||||||    
T  8961054 tataagaaaaagataaatttaaagttgcaatgaaaattgtgtgagagaaaagtttgag 8961111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 32690753 - 32690878
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    |||||||||||||||  ||||||| ||||||||||| |||||||||||||||  ||||||||||||  ||||| ||||||| ||||||||||| ||||||    
T  32690753 taagaaaaagacaaacctaaagttgcattgaaaattgtgcgagagaaaagttgaagtatttattgagagtaaagttgagagaaaaaaattaaagttgtat 32690852  T
Q  203 tgaaaatgtaaagtgacatttatttt 228  Q
    |  ||||||||||||||||| |||||    
T  32690853 ttgaaatgtaaagtgacattcatttt 32690878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 27810473 - 27810345
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaa 206  Q
    ||||||| ||| ||||||||  |||||||||| || |||| ||||||||||||||||||||| | |||| |||| || ||||||||||| ||||||||||    
T  27810473 aaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatttattgaggataaagttgaaagaaaaaaattaaagttgtattgaa 27810374  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||| ||||| ||||||    
T  27810373 aatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 33585002 - 33585129
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaaa 207  Q
    |||||||| |||||||| ||||||||||| || ||||  |||||||| |||||||||||||||||||| |||  |||||||| ||||| |||||||||||    
T  33585002 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaa 33585101  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||| || ||||||||||||    
T  33585102 atgtaaagtgacgttcattttaaaacaa 33585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 33822523 - 33822650
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-ttgt 200  Q
    |||||| |||||||| |||||||| ||||||||||| || ||||||  ||||||  ||||||||||||||||||| |||| |||| ||||||||| ||||    
T  33822523 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaattaaagttgt 33822622  T
Q  201 attgaaaatgtaaagtgacatttatttt 228  Q
    |||||||||||||||||||||| |||||    
T  33822623 attgaaaatgtaaagtgacattcatttt 33822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 228
Target Start/End: Complemental strand, 36783589 - 36783361
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc------- 103  Q
    ||||||| ||||| ||| ||| ||||| ||||| |||||| ||||||  || |||||||||||| ||||||||||||| |||||||||| |||           
T  36783589 tccgtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttact 36783490  T
Q  104 --ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaatta-aattg 199  Q
      ||| |||||||||||| |||||||| ||||||||||| || |||||||||||| ||| ||||| | | |||||| || ||   ||||||||| | |||    
T  36783489 tgttatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttg 36783390  T
Q  200 tattgaaaatgtaaagtgacatttatttt 228  Q
    ||||| ||||||||||||||||| |||||    
T  36783389 tattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 24436459 - 24436551
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc 103  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||||||||| |||||||||||| |||||| ||||||||||||| |||||||    
T  24436459 tccgttttaaaatgagtgtcgttttagccaattgcacatagattaaggaataaaatgaaataatcattagatataacacttttaccaaaatgc 24436551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 33693973 - 33693877
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa 98  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||| | ||||| ||||  ||||||||||| ||||||| |||||||||||||||    
T  33693973 aatactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttactaa 33693877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 41567016 - 41566864
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg 102  Q
    |||| |||||||||| ||||| |  || |||||||  |||| ||||||| |||| |||| |||| |||||||||||| |||||| | |||||||||| ||    
T  41567016 atactccatccgtttcaaaatgaaggtggttttagctaattgcacacaagttaatgaatgaaataaaataattattaaacataata-ttttactaaactg 41566918  T
Q  103 cttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
       ||||||| |||||| |||||||| ||||||||||||| |||||||||||||    
T  41566917 tcaaagaaaatgacaaacttaaagttgcattgaaaattatacgagagaaaagtt 41566864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 793626 - 793760
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    |||||| |||||||| |||||||| ||||||||||| || ||||||  ||||||| |||||||||||| |||| | |||  |||||||| ||||| ||||    
T  793626 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaagaaaaaaattaaagttgt 793725  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||||||||||| ||||| ||||||    
T  793726 attggaaatgtaaagtgacattcattttgaaacaa 793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 4833657 - 4833787
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcga--gagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattg 204  Q
    ||||||||||| |||||||| ||||||||||| || ||  |||||||||||||||||||||||| |||||| |||  || ||||||||||| ||| ||||    
T  4833657 aaaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattg 4833756  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||  ||||| ||||| ||||||    
T  4833757 aaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 39059986 - 39059805
Alignment:
Q  64 aatgaaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaag 154  Q
    ||||||||||| |||||||||||||||||||||||| | |          || |||||| ||||| |||||||| ||||||||||| |  |||| ||||     
T  39059986 aatgaaataatcattagacataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaat 39059887  T
Q  155 tttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||||||||||||| |||||| ||   ||||||||||||| |||||||||||||||||||  ||||| ||||| ||||||    
T  39059886 ttggagtatttattgagggtaaagttagaagaaaaaattaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 12167529 - 12167617
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||| ||||| ||||||| |||||  |||| ||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||    
T  12167529 tccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaa 12167617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 43257780 - 43257867
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| ||||| ||||||| ||||| |||||| ||||| |||| |||||||||||| |||||||||||||||| |||||||    
T  43257780 tccgttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaa 43257867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 42329566 - 42329700
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    |||||| |||||||| |||||||| ||||||||||| || ||||||  ||||||  |||||||||| | |||||| |||  |||||||| ||||| ||||    
T  42329566 taagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaattaaagttgt 42329665  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||||||||||| ||||| ||||||    
T  42329666 attggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 16886299 - 16886215
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||| || ||||||||||||| ||||| | |||| || ||||||| |||||||||||||||||||| |||||| |||||||||    
T  16886299 ttttaacatgagtgtcgttttagccaattgcgcacagatcaaggaatgaaatgaaataattattagacgtaacacatttactaaa 16886215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 27652236 - 27652433
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ 102  Q
    ||||||||||||||| ||||||| ||||| |||||||||||| |||||| |||  ||| ||||| | |   | ||||||| ||||||||||||           
T  27652236 catccgttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataacctta 27652335  T
Q  103 ctt---aagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa 196  Q
    |||   |||||||||||||| |||||||| ||||||||||  | || |||||||||||| || |||||||||| |||||| |||| | |||||||||||    
T  27652336 ctttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttga-aaaaaaaattaaa 27652433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 31557363 - 31557489
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    ||||||||||||||| |||||||| ||||||||||| || |||||||       |||||||||||||  |||| |||  || ||||||||||| ||||||    
T  31557363 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaa------tagtatttattgaaaataaagttggaagaaaaaaattaaagttgtat 31557456  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||| ||||||| ||||| ||||||    
T  31557457 tgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 29653534 - 29653661
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    |||||| |||||||| |||||||| ||||  ||||| || ||||  |||||||| ||||||||||||| |||||| |||  || ||||||||||| ||||    
T  29653534 taagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 29653633  T
Q  201 attgaaaatgtaaagtgacatttatttt 228  Q
    |||| ||||||||| ||||||| |||||    
T  29653634 attggaaatgtaaaatgacattcatttt 29653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 6519211 - 6519156
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||    
T  6519211 tccgttttaaaatgagtgtcgttttagttaattacacacatattaaggaatgaaat 6519156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 31889850 - 31889799
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  31889850 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 31889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 34919961 - 34919881
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||| ||| ||| ||||| |||||||||||| |||||||||| |||| ||||||| ||| |||||| || ||||||||||    
T  34919961 aaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaa 34919881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 31889791 - 31889741
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  31889791 aaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 7388294 - 7388335
Alignment:
Q  194 aaattgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||| |||||||||||| ||||||||||||    
T  7388294 aaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26660998 - 26660933
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||| || ||||||||||||| ||||||| ||||| ||||| |||||| |||||||||| ||||    
T  26660998 taatactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 26660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26932591 - 26932526
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||| || ||||||||||||| ||||||| ||||| ||||| |||||| |||||||||| ||||    
T  26932591 taatactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 26932526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 33693807 - 33693742
Alignment:
Q  169 gaaggtaaaattgagagaaaaaa-ttaaattg-tattgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||||  |||||||| ||||| || |||| ||||||||||||||||||||||||||||    
T  33693807 gaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatgtaaagtgacatttattttaaaa 33693742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 33741596 - 33741464
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaatt--aaattgtat 202  Q
    ||||||||||| ||| |||||||| ||||| ||||| || |  ||||||||| |||||| |||| | |||||| ||   |||||||| |  || ||| ||    
T  33741596 taagaaaaagataaacttaaagttgcattggaaattgtgtggtagaaaagttagagtatatattaagggtaaagtttgaagaaaaaaatgaaagttgcat 33741497  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||| || || ||||||    
T  33741496 tgaaaatgtaaagtgacattcatattgaaacaa 33741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39504969 - 39504904
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||  ||| ||||| |||| ||||    
T  39504969 taatactccatccgttttaaaatgagtgtcgctttagtcaattacgtacatattaaagaatgaaat 39504904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14979960 - 14980108
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaa 100  Q
    |||||| || ||||||| ||||| ||||||| ||||| |  |  |||||| |||||| |||  ||||||||||| ||| || ||||||||||||| |||     
T  14979960 taatactccctccgtttcaaaatgagtgtcgctttaggctttggcacacagattaagaaatggaatgaaataatcattggatataacacttttaccaaac 14980059  T
Q  101 tgct---------taagaaaaagacaaaattaaagtttcattgaaaatt 140  Q
    |||          |||||||||||||||||||||||| |||||||||||    
T  14980060 tgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 14980108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 39730178 - 39730130
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||||||| ||||||||||||| ||||| |||||| ||||||||||    
T  39730178 cgttttaaaatgagtgtcgttttaggcaattgcacacatattaaggaat 39730130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 4011682 - 4011733
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    ||||||||||| |||||||||||| ||||||||||| || |||| |||||||    
T  4011682 taagaaaaagataaaattaaagttgcattgaaaattgtgtgagaaaaaagtt 4011733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 14980142 - 14980193
Alignment:
Q  185 gaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  14980142 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 14980193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 29044851 - 29044764
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcg-agagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa 191  Q
    |||||| |||| ||| |||||||| ||||||||||| || | ||||||||||||||| ||||||||| | |||| |||  ||||||||    
T  29044851 taagaataagataaacttaaagttgcattgaaaattgtgtggagagaaaagtttgagcatttattgaggataaagttggaagaaaaaa 29044764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 32963074 - 32963161
Alignment:
Q  148 agaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||| ||||||||||||| |||||| ||   | ||||||| || |||||||| ||||||||||||  ||| ||||| ||||||    
T  32963074 agaaaagttagagtatttattgagggtaaagtttgaaaaaaaaataaagttgtattggaaatgtaaagtggtattcattttgaaacaa 32963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39335122 - 39335173
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaatt 62  Q
    ||||||||||||| | ||||||||||||||||| || | |||||||||||||    
T  39335122 tccgttttaaaatgaatgtcgttttagtcaattgcatataaattaaggaatt 39335173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 41845386 - 41845429
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  41845386 aaaaaattaaaattgtattgaaaatgtaaagtgacattcatttt 41845429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7731697 - 7731747
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||| |||||||| |||||||||||| ||||||||||||    
T  7731697 aaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaacaa 7731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 8336330 - 8336376
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  8336330 ttttaaaatgagtgtcgttttagccaattacacaaatattaaggaat 8336376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 12167698 - 12167736
Alignment:
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  12167698 ttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 39335367 - 39335333
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgtttta 36  Q
    ||||| |||||||||||||||||||||||||||||    
T  39335367 aatactccatccgttttaaaataagtgtcgtttta 39335333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 39804241 - 39804211
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaa 41  Q
    |||||||||||||||||||||||||||||||    
T  39804241 tccgttttaaaataagtgtcgttttagtcaa 39804211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 1513180 - 1513131
Alignment:
Q  44 acacacaaattaaggaattaaatgaaataattattagacataacactttt 93  Q
    |||||||||||||| ||| |||||||||||| |||| |||||| ||||||    
T  1513180 acacacaaattaagaaatgaaatgaaataatcattaaacataatactttt 1513131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 4967410 - 4967498
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||| ||||| ||||||| ||||| |  | ||||||| |||||| |||  ||||||||||| ||| || ||||| |||||||||||    
T  4967410 tccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatggaatgaaataatcattggatataacgcttttactaaa 4967498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43584296 - 43584332
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttag 37  Q
    |||||| |||||||||||||| |||||||||||||||    
T  43584296 taatactccatccgttttaaagtaagtgtcgttttag 43584332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 232
Target Start/End: Original strand, 8382403 - 8382629
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaa 107  Q
    |||||||||||||||| |||||||||||||  |||| |||| ||||||| |||| |||| |||||||  ||||||||||||||||||||||| |||  ||    
T  8382403 ccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaataatcgttagacataacacttttactaaactgcccaa 8382502  T
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattga 205  Q
    |||||||||||| ||| |||| ||||||||||| || |||||||||||| |||||| |||||| |||||| ||||||| ||||||||||| |||||||||    
T  8382503 gaaaaagacaaacttatagttgcattgaaaattgtgtgagagaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtattga 8382602  T
Q  206 aaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||||||||||| |||||||||    
T  8382603 aaatgtaaagtgacattcattttaaaa 8382629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 39970545 - 39970323
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaag 114  Q
    ||||||||| ||||||||||||| ||||| |||| ||||||| |||| |||||||||||| |||||||||| ||||||||||||| |||  |||||||||    
T  39970545 ttttaaaatgagtgtcgttttagccaattgcacataaattaaagaatgaaatgaaataatcattagacataccacttttactaaactgcccaagaaaaag 39970446  T
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagt-atttattgaaggtaaaattgagagaaaaaattaa-attgtattgaaaatgta 212  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||||| | ||| ||| |||||| ||| ||||||||| |||  |||||||| |||||||    
T  39970445 acaaacttaaagttgcattgaaaattgtgcgagagaaaagtttgagtaaattagtgagggtaaagttgggagaaaaaactaatgttgtattggaaatgta 39970346  T
Q  213 aagtgacatttattttaaaacaa 235  Q
    |||| ||||| ||||| ||||||    
T  39970345 aagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 233
Target Start/End: Original strand, 3095437 - 3095656
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaag 114  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||  ||||||||||| |||| | || |||||||||||||| |||  ||| |||||    
T  3095437 ttttaaaata-gtgtcgttttagtcaattacacacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgccaaaggaaaag 3095535  T
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgaga-gaaaaaattaaa-ttgtattgaaaatgta 212  Q
    ||||| |||||||| ||||||||| | |||||||||||||||  |||||||||||| |||||| ||| || |||||||||||| ||||||||||||||||    
T  3095536 acaaacttaaagttgcattgaaaagtgtgcgagagaaaagttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgta 3095635  T
Q  213 aagtgacatttattttaaaac 233  Q
    |||| ||||| ||||||||||    
T  3095636 aagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 32326642 - 32326873
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---- 104  Q
    ||||||||||||||| ||||||| ||||||||||| |||||| |||||||||| |||||||||||| ||||||| |||||||||||||||| |||         
T  32326642 catccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttg 32326741  T
Q  105 -----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag--aaaaaattaaa- 196  Q
         || |||||||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||||||  ||||||||||| ||  |||||||||||     
T  32326742 ttttatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaag 32326841  T
Q  197 ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||||||||||||||||||||||||||    
T  32326842 ttgtattgaaaatgtaaagtgacatttatttt 32326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 32661508 - 32661310
Alignment:
Q  32 ttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagtttca 131  Q
    |||||||||||| ||||||||||||||||| |||| ||||||| |||||||||| ||||| ||||||| |||  | | |||||||||| ||||||||  |    
T  32661508 ttttagtcaattgcacacaaattaaggaatgaaataaaataatcattagacatatcacttctactaaactgcacacggaaaagacaaacttaaagttgta 32661409  T
Q  132 ttgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||| || |||||||||||| ||||||||||||| |||||| ||| ||| ||||||||||| |||||||||||||||| ||| ||||| |||||    
T  32661408 ttgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 156449 - 156309
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaag 114  Q
    ||||||||| ||||| |||||||| ||||||||| |||||||||| | |||||||||||| ||||||||||||||||||| |||| |||  ||||||| |    
T  156449 ttttaaaatgagtgttgttttagttaattacacataaattaaggattgaaatgaaataatcattagacataacacttttattaaactgccgaagaaaagg 156350  T
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagt 155  Q
    ||||| ||||||||  |||||||||| ||||||||||||||    
T  156349 acaaacttaaagttgtattgaaaattgtgcgagagaaaagt 156309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 9022629 - 9022393
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||||  |||  |||||| |||| |||||||||||||||||||||||| |||           
T  9022629 tccgttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgtt 9022530  T
Q  105 ---taagaaaaagacaaaattaaa-gtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-tt 198  Q
       || |||||||||||| ||||| ||| ||||||||||| || |||| ||||||| ||||||||||||| |||||| |||  || ||||||||||| ||    
T  9022529 ttatatgaaaaagacaaacttaaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagtt 9022430  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| ||| ||||||||||||| ||||||||||||    
T  9022429 gtattggaaacgtaaagtgacattcattttaaaacaa 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 22601365 - 22601134
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ctt-- 105  Q
    |||| ||||| | ||||| ||||| |||||  ||||| ||||| |||| |||||||||||| |||||||||||| ||||||||||| ||      |||      
T  22601365 gtttcaaaatgaatgtcgatttagccaattgtacacatattaatgaataaaatgaaataatcattagacataactcttttactaaattgtctttacttta 22601266  T
Q  106 -aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtatt 203  Q
     |||||||||||||| |||||||| ||||||||||| || |||||||| ||| |||||||||| || |||||| |||  ||||| ||||||| |||||||    
T  22601265 taagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaaggttggagtatttatcgagggtaaagttggaagaaacaattaaagttgtatt 22601166  T
Q  204 gaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | ||||||||||||||||| ||||| ||||||    
T  22601165 ggaaatgtaaagtgacattcattttgaaacaa 22601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 2813005 - 2812865
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaag 114  Q
    ||||||||| | ||||||||||| ||||| || |||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||  |||||||||    
T  2813005 ttttaaaatgaatgtcgttttagccaattgcatacaaattaagtaattgaatgaaataatcattagacataacacttttactaaactgcccaagaaaaag 2812906  T
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    | ||| ||||| || ||||||||||| |||||||||||||||    
T  2812905 aaaaacttaaa-ttgcattgaaaattgtgcgagagaaaagtt 2812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 36915598 - 36915365
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| ||||||||||||  ||||| || ||| ||||||||||  ||||||||||| ||||||||||| | |||||||||| |||           
T  36915598 tccgttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgtt 36915499  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttg 199  Q
       || |||||||||||| |||||||| ||||||||||| ||  ||| ||||  |||| ||||||||||||||||| |||  |||||||| ||||| |||    
T  36915498 ttatatgaaaaagacaaacttaaagttgcattgaaaattgtg--agaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttg 36915401  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||||||| ||||| ||||||    
T  36915400 tattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 2803173 - 2803392
Alignment:
Q  10 atccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaaga 109  Q
    |||||||| ||||||||||||| ||||   |||| ||||||||||  ||||| |||||||||||| |||| |||||||||||||| |||| ||  |||||    
T  2803173 atccgtttcaaaataagtgtcgctttaactaattgcacacaaattttggaatgaaatgaaataatcattatacataacacttttattaaactgtctaaga 2803272  T
Q  110 aaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt----gagagaaaaaatt-aaattgtattg 204  Q
    |||||||||| ||||||||  |||||||||| ||| ||||||||||| |||           |||||| ||    | ||||||||||| |||||||||||    
T  2803273 aaaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagttggag-----------ggtaaagttgggagggagaaaaaattaaaattgtattg 2803361  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||||| ||||||    
T  2803362 aaaatgtaaagtgacatttattttgaaacaa 2803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 37185576 - 37185734
Alignment:
Q  9 catccgttttaaaataagtgtcgtt---ttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgctt 105  Q
    ||||||||||||||| ||||| |||   |||||||||| |||| ||||||||| ||  ||||||||||| ||||||||||||||||||||||||||   |    
T  37185576 catccgttttaaaatgagtgttgttgttttagtcaattgcacataaattaaggtatagaatgaaataatcattagacataacacttttactaaaatatct 37185675  T
Q  106 aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtattta 166  Q
    |||  ||||||||| |||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  37185676 aag--aaagacaaacttaaagttgcattgaaaaatatacgagagaaaagttggagtattta 37185734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 7612628 - 7612496
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgtat 202  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||| | |||||| |||  ||||||||  | |  ||||||    
T  7612628 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtat 7612529  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||| ||||||||||||    
T  7612528 tgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 30789116 - 30788934
Alignment:
Q  63 aaatgaaataattattagacataacacttttactaaaatg------ctt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa 153  Q
    |||||||||||| ||||||||||||||||||| |||| ||      |||   |||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  30789116 aaatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaa 30789017  T
Q  154 gtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaaca 234  Q
    ||| ||||||||| | | |||||| || ||   ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  30789016 gttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 27109736 - 27109975
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg----- 102  Q
    |||||||||| ||||| |||||||||||||    |  |||||| |||||| |||  ||||||||||| |||||| ||||||||||||||||| ||         
T  27109736 ccatccgtttcaaaatgagtgtcgttttaggtgttggcacacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttt 27109835  T
Q  103 --ctt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa 196  Q
      |||   ||||||| |||||| |||||||| ||||| ||||| || |||||||||||| ||||||||||||| |||||| |||  || |||||||||||    
T  27109836 tactttataagaaaaggacaaacttaaagttgcattggaaattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaa 27109935  T
Q  197 -ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
     |||||||| ||||| ||||||||||| ||||| ||||||    
T  27109936 gttgtattggaaatggaaagtgacattcattttgaaacaa 27109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 41415074 - 41414978
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa 98  Q
    ||||| |||||||||||||||||| ||||||||||| ||||| |||| | |||||||||| |||||||||||| ||||||| |||||||||||||||    
T  41415074 aatactccatccgttttaaaataaatgtcgttttagccaattgcacatatattaaggaatgaaatgaaataatcattagacgtaacacttttactaa 41414978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 229
Target Start/End: Complemental strand, 43938321 - 43938124
Alignment:
Q  38 tcaattacacacaaattaaggaat--ta-aatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagtttcattg 134  Q
    |||||| ||||||||||||| |||  || ||||||||||| |||||||| |||| ||||| |||| ||   |||||||||| ||| |||||||| ||||     
T  43938321 tcaattgcacacaaattaagaaatattataatgaaataatcattagacaaaacatttttattaaattgtccaagaaaaagataaacttaaagttgcatta 43938222  T
Q  135 aaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttta 229  Q
    |||| | ||||||||||||||| |||||||||||||| ||||||||  || | ||||||||||| || ||||  |||||||||||| |||| ||||||    
T  43938221 aaaagtgtgcgagagaaaagttggagtatttattgaatgtaaaatttagaaaaaaaaaattaaagttctattcgaaatgtaaagtggcattcatttta 43938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 11257670 - 11257540
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgtattg 204  Q
    ||||||| ||||||| |||||||| ||||||||||| || ||||||||||||  ||||||||||||   |||| |||  ||||||| | || |||||||     
T  11257670 taagaaacagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagattaaagttggaagaaaaattaaagttgtatta 11257571  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||| ||||||||||||    
T  11257570 aaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 35052604 - 35052469
Alignment:
Q  104 ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttg 199  Q
    |||||||||||| ||  |||||||| |||||||||||||| ||||||  ||| ||||||||||||||||||| ||| |||| || ||||||||||| |||    
T  35052604 ttaagaaaaagataagtttaaagttgcattgaaaattatgtgagagagaaaattttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttg 35052505  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| |||||||||  |||||| ||||||||||||    
T  35052504 tattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 42946240 - 42946120
Alignment:
Q  117 aaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaa 214  Q
    |||||| ||||| |||| |||||| || ||||||||| || ||||||||||||| ||||||||||| || ||||||||||| ||||||| ||||||||||    
T  42946240 aaaattgaagttgcattaaaaattgtgtgagagaaaaattagagtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaa 42946141  T
Q  215 gtgacatttattttaaaacaa 235  Q
     ||||||| ||||||||||||    
T  42946140 atgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 38328974 - 38329062
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||| ||||| ||| ||| ||||||||||| |||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  38328974 tccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaa 38329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 5588521 - 5588628
Alignment:
Q  130 cattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattt 227  Q
    |||||||| || || ||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||| ||||||||| ||||||| | ||    
T  5588521 cattgaaatttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtt 5588620  T
Q  228 taaaacaa 235  Q
    ||||||||    
T  5588621 taaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 8106811 - 8106895
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||| ||| ||| ||||||||||| |||||||||||| |||| |||||||||||| |||||||||| |||||||| ||||    
T  8106811 ttttaaaatgagtatcgatttagtcaattgcacacaaattaaagaatgaaatgaaataatcattagacatagcacttttattaaa 8106895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 14541768 - 14541900
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    |||||| |||||||| |||||||| ||||||||||| || ||||||||||||  |||||||||| | | |||| |||  || ||||||||||| ||||||    
T  14541768 taagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaaggataaagttggaagaaaaaaattaaagttgtat 14541867  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |  ||||||||||||||||| ||||| ||||||    
T  14541868 tagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 34461611 - 34461737
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaa 206  Q
    |||||||| |||||||| ||||||||||| || ||||  |||||||| |||| |||||||| |||||| |||  ||| ||||||||||| |||||||| |    
T  34461611 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaattaaagttgtattgga 34461710  T
Q  207 aatgtaaagtgacatttattttaaaac 233  Q
    |||||||||||||||| ||||| ||||    
T  34461711 aatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 41790051 - 41790214
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaa-ttaaggaattaaatgaaataattattagacataacacttttactaaaat 101  Q
    |||| |||||||||| ||||||| ||||||||||| ||||| || | ||| |||| |||| |||||||||||| ||||||||||| ||||||| |||| |    
T  41790051 atactccatccgtttcaaaataaatgtcgttttagccaattgcataaaaaattaatgaataaaatgaaataatcattagacataatacttttattaaatt 41790150  T
Q  102 g-ct--------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    | ||        ||||||||||||||| ||||||||  |||||||||| || ||||||||||||    
T  41790151 gtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgagagaaaagtt 41790214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 11335991 - 11336106
Alignment:
Q  44 acacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgctt---aagaaaaagacaaaattaaagtttcattgaaaatt 140  Q
    ||||||| |||||| |||  |||||| |||  ||| || ||||||||||||||||| | |||   ||||||||||||||||||||||| |||||||||||    
T  11335991 acacacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaattactttataagaaaaagacaaaattaaagttgcattgaaaatt 11336090  T
Q  141 atgcgagagaaaagtt 156  Q
     || ||||||||||||    
T  11336091 gtgtgagagaaaagtt 11336106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 6839440 - 6839286
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc------- 103  Q
    ||||||| ||||| ||||||||||||  | |||  ||||| |||||  |||  ||||||||||| |||||||||||||||||||||||| |||           
T  6839440 tccgtttaaaaatgagtgtcgttttaacccattgtacacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttact 6839341  T
Q  104 --ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
       |||||||||||||||  |||| || |||||||||||||| ||||||||||||    
T  6839340 ttataagaaaaagacaaacataaaattgcattgaaaattatgtgagagaaaagtt 6839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 18673016 - 18673251
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ 102  Q
    ||||| ||||||||| ||||||| | ||| ||||||||||||||||||| ||| |||| || || | |   | ||||||| ||||||||||||           
T  18673016 catccattttaaaatgagtgtcgctctagccaattacacacaaattaagaaatgaaataaagtagtcaaatgtcataacaattttactaaaataacctta 18673115  T
Q  103 ctta--agaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa- 196  Q
    ||||  ||||||| ||||| ||||| ||  |||||||||| || ||||  |||||||| ||||||||||| |||||||| |||  || |||||||||||     
T  18673116 cttatcagaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaag 18673215  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    | | ||||||||||||||| |||||| |||||||||    
T  18673216 tcgcattgaaaatgtaaagcgacattcattttaaaa 18673251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 34168234 - 34168353
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtat 202  Q
    |||||| |||||||| |||||||| ||||||||||| || |||||||      |||||||| |||| |||||| |||  |||||||| ||||| ||||||    
T  34168234 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaa------gagtatttcttgagggtaaagttggaagaaaaaagttaaagttgtat 34168327  T
Q  203 tgaaaatgtaaagtgacatttatttt 228  Q
    |||||||||||||||||||| |||||    
T  34168328 tgaaaatgtaaagtgacattcatttt 34168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 45187229 - 45187303
Alignment:
Q  25 agtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||| ||||| ||||| |||||| ||||||||||  ||||||||||| ||||||||| ||||||||||||||    
T  45187229 agtgtcgctttagccaattgcacacagattaaggaatataatgaaataatcattagacatgacacttttactaaa 45187303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 16209068 - 16208955
Alignment:
Q  108 gaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattga 205  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||   |||      || ||||||||| | || ||||||||||| |||||||||    
T  16209068 gaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagtt---gta------gagggtaaaatttaaagaaaaaaattaaagttgtattga 16208978  T
Q  206 aaatgtaaagtgacatttatttt 228  Q
    ||||||||||||||||| |||||    
T  16208977 aaatgtaaagtgacattcatttt 16208955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 13109119 - 13108993
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgta 201  Q
    ||||||||||||||| ||||| || |||| |||||  | || |||||||||||| ||||||||||| | | || | |||  ||||||||||||| ||| |    
T  13109119 taagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagagttggaagaaaaaattaaagttgca 13109020  T
Q  202 ttgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||||||| ||||||| |||||    
T  13109019 ttgaaaatgtaaaatgacattcatttt 13108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 29931263 - 29931318
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgag 160  Q
    ||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  29931263 taagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtttgag 29931318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 27416633 - 27416506
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat----tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgt 200  Q
    ||||||||||||||| ||| | || ||||||||||    | || |||| ||||||| ||||||||||||| |||||| |||   |||||| | || ||||    
T  27416633 taagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaaagttggacgaaaaactaaagttgt 27416534  T
Q  201 attgaaaatgtaaagtgacatttatttt 228  Q
    |||| ||||||||||||||||| |||||    
T  27416533 attggaaatgtaaagtgacattcatttt 27416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 1774164 - 1774214
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  1774164 aaaaaattaaagttgtattgaaaatgtaaattgacattcattttaaaacaa 1774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 29931336 - 29931386
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  29931336 aaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38329134 - 38329184
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  38329134 aaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaacaa 38329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 45187389 - 45187439
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  45187389 aaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaa 45187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4760468 - 4760533
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||| |||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||| ||||    
T  4760468 taatactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaat 4760533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 43448959 - 43448895
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||| |||||||||| |||||  |||||| |||||||||||||||||| ||||| |||| ||||    
T  43448959 aatactccatccgtttcaaaatgggtgtcgctttagtcaattacacacatattaatgaatgaaat 43448895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 1774093 - 1774128
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaatt 140  Q
    |||||||||||||||||||||||| |||||||||||    
T  1774093 taagaaaaagacaaaattaaagttgcattgaaaatt 1774128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 7129407 - 7129356
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||| ||||||||||||||||| ||||| ||||| || ||||||||||||    
T  7129407 taagaataagacaaaattaaagttgcattggaaattgtgtgagagaaaagtt 7129356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 43084550 - 43084601
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||||||||||  ||||||||||| |||||| |||||||||| ||||    
T  43084550 ttttaaaataagtgtcactttagtcaattgcacacatattaaggaatgaaat 43084601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 3203359 - 3203325
Alignment:
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||||||||| ||||||    
T  3203359 attgaaaatgtaaagtgacatttattttgaaacaa 3203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 5044253 - 5044378
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaatt-aaattgtattga 205  Q
    ||||| ||||| ||||||||  ||| |||||| || || |||||||||  ||||||||||||   |||| |||  ||| |||||||| ||||| ||||||    
T  5044253 aaaaatacaaatttaaagttgtattaaaaattgtgtgatagaaaagttgaagtatttattgagaataaagttggaagaaaaaaaattaaaattatattga 5044352  T
Q  206 aaatgtaaagtgacatttattttaaa 231  Q
    ||||||||| ||| ||| ||||||||    
T  5044353 aaatgtaaaatgatattcattttaaa 5044378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24732191 - 24732093
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||| | |||||||||||||| ||||||| | ||| |  | ||| ||| |||||| |||| ||||||||| | ||| || |||||||||||||||||    
T  24732191 taatactcaatccgttttaaaatgagtgtcgctgtagactttgacatacagattaagaaattgaatgaaatagtcattggatataacacttttactaaa 24732093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 32061412 - 32061466
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||| |||||| |||| || |||||||| || |||||||||||||||||||||    
T  32061412 cacacatattaagaaattgaacgaaataatcatcagacataacacttttactaaa 32061466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 32061540 - 32061578
Alignment:
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  32061540 ttgtatagaaaatgtaaagtgacattcattttaaaacaa 32061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 4530103 - 4530054
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaag 57  Q
    |||||||||| ||||| ||||||||||||| ||||| |||||| ||||||    
T  4530103 ccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaag 4530054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 8107264 - 8107301
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatt 222  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8107264 aaaaaattaaagttgtattgaaaatgtaaagtgacatt 8107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 8471389 - 8471344
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga 150  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||||    
T  8471389 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 8471344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 26439086 - 26439041
Alignment:
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgag 160  Q
    ||||| |||||||| ||||||||||| || ||||||||||||||||    
T  26439086 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgag 26439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 41414908 - 41414843
Alignment:
Q  169 gaaggtaaaattgagagaaaaaa-ttaaattg-tattgaaaatgtaaagtgacatttattttaaaa 232  Q
    |||||||||||||  |||||||| ||||| || |||| ||||| ||||||||||||||||||||||    
T  41414908 gaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttattttaaaa 41414843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 40228809 - 40228753
Alignment:
Q  10 atccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||||| ||||| |||||| |||||||||||| |||| | |||||||||| ||||    
T  40228809 atccgtttcaaaatgagtgtcattttagtcaattgcacatatattaaggaatgaaat 40228753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 24775425 - 24775187
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct--- 104  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||       
T  24775425 ccatccgttttaagatgagtgtcgttttagtcaattgcacacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgctctt 24775326  T
Q  105 ------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa--ttaaa 196  Q
          ||||||||| ||||| ||||||||  |||||||||| || ||||||||||||  |||||||||||| |||||| ||| |||||||||  | |||    
T  24775325 actttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaacttgggagaaaaaaattaaaa 24775226  T
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  24775225 ttgtattgaaaatgtaaagtgacaatcattttaaaacaa 24775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 6592189 - 6591963
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||||||||| || |||||||||  |||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||||| ||   |||||    
T  6592189 tccgttttaaaatgagagtcgttttaaccaattagacacgaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgtcaaagaa 6592090  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaa-ttgtattgaaa 207  Q
    ||||||||| |||||| | ||||||||||||||| ||||||||||| ||||||| |||||| | ||| ||  |||| ||||||||||| |||||||| ||    
T  6592089 aaagacaaacttaaag-tgcattgaaaattatgcaagagaaaagttggagtattcattgaaaggaaagttgggagaaaaaaaattaaagttgtattggaa 6591991  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    ||||||| ||| ||| ||||||||||||    
T  6591990 atgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 1360408 - 1360175
Alignment:
Q  4 tacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc 103  Q
    |||||||||  ||||||||| | |||||||||||| |||| ||||||||||||| |||  ||| ||||||| ||||| ||| |||||||||||||| |||    
T  1360408 tacaccatcttttttaaaatgaatgtcgttttagttaattgcacacaaattaagtaatggaataaaataatcattagccatgacacttttactaaactgc 1360309  T
Q  104 ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgta 201  Q
      |||||||||||||| |||||||| ||||||||||| |   |||||||||||  |||||||||||| |||||||||| ||| ||||||||||| |||||    
T  1360308 acaagaaaaagacaaacttaaagttgcattgaaaattgtttaagagaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgta 1360209  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||||| ||||||||||| ||||| ||||||    
T  1360208 ttggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 33 - 235
Target Start/End: Complemental strand, 4536773 - 4536572
Alignment:
Q  33 tttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagtttcat 132  Q
    ||||| ||||| |||| |||||||||||| |||||||||||| |||||||||| ||||||||||||| |||  |||||||||||||| |||||||| |||    
T  4536773 tttagccaattgcacataaattaaggaatgaaatgaaataatcattagacatatcacttttactaaactgcccaagaaaaagacaaatttaaagttgcat 4536674  T
Q  133 tgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaa 230  Q
    |||||||| || |||   |||||| |||||||| |||| |||||| ||| ||| ||||||||||| |||||||| ||||||||||||||||| ||||| |    
T  4536673 tgaaaattgtgtgag---aaagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 4536577  T
Q  231 aacaa 235  Q
    |||||    
T  4536576 aacaa 4536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 7743636 - 7743401
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---- 104  Q
    ||||||||| ||||| ||||||| ||||| ||||| |||||| ||||| ||||||||||||||||| || ||| ||||||||||||||||  |||         
T  7743636 catccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgccctta 7743537  T
Q  105 -----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaa-attaaa-t 197  Q
         ||||||||||||||| |||||||| ||||||||||| || |||||||||||| || |||||||||| |||||| |||  ||||||| |||||| |    
T  7743536 ctttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagt 7743437  T
Q  198 tgtattgaaaatgtaaagtgacatttattttaaaac 233  Q
    ||||||| ||||||||||||||||| ||||||||||    
T  7743436 tgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 36360298 - 36360520
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc---------tt 105  Q
    ||||||||| ||||||| ||||||||||| ||| |||||||| |||| |||||||||||| |||||||||||||||||||||||| |||          |    
T  36360298 ttttaaaatgagtgtcgctttagtcaattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaactgcccttattttat 36360397  T
Q  106 aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtatt 203  Q
    |||||||||| ||| ||||||||  |||||||||  || | ||||||||||||||||| |||||| |||||| |||| || ||||||||||| |||||||    
T  36360398 aagaaaaagataaacttaaagttgtattgaaaat--tgtgtgagaaaagtttgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgtatt 36360495  T
Q  204 gaaaatgtaaagtgacatttatttt 228  Q
    ||||||| ||||||| ||| |||||    
T  36360496 gaaaatgcaaagtgatattcatttt 36360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 50 - 234
Target Start/End: Complemental strand, 14511644 - 14511459
Alignment:
Q  50 aaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagag 149  Q
    |||||||||||| |||||||||||| |||||||||||| |||| | ||||||| | |||||||||||||| |||||||| ||||||||||| ||| | ||    
T  14511644 aaattaaggaatgaaatgaaataatcattagacataacccttt-attaaaatgttcaagaaaaagacaaatttaaagttacattgaaaattgtgcaaaag 14511546  T
Q  150 aaaagtttgagtatttattgaaggtaaaattgaga-gaaaaaattaa-attgtattgaaaatgtaaagtgacatttattttaaaaca 234  Q
    ||||||| ||||||||||||| | |||| ||  || |||||||||||  ||||||| ||||||||||| |||||| ||||| |||||    
T  14511545 aaaagttagagtatttattgaggataaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcattttgaaaca 14511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 4840749 - 4840874
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    |||||||||||||||||||||||| ||||||||| | || | |||||||||||||||||||||||| |||||| |||  || ||||||||||| ||||||    
T  4840749 taagaaaaagacaaaattaaagttgcattgaaaactgtgtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 4840848  T
Q  203 tgaaaatgtaaagtgacatttatttt 228  Q
    || ||||||||||||||||| |||||    
T  4840849 tggaaatgtaaagtgacattcatttt 4840874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 43388679 - 43388811
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    ||||||||| ||||| ||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||| |||  || ||||||||||| ||| ||    
T  43388679 taagaaaaatacaaacttaaagttgtattgaaaattatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcat 43388778  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||| |||||| ||||| ||||||    
T  43388779 tgaaaatgtaaagcgacattcattttgaaacaa 43388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 42970131 - 42970035
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaa 98  Q
    ||||| || ||||||||||||||||||||||||||| ||||| |||| | ||||||||||  ||||||||||||||||||| |||||||||||||||    
T  42970131 aatactccttccgttttaaaataagtgtcgttttagccaattgcacatatattaaggaatgcaatgaaataattattagacgtaacacttttactaa 42970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 1298802 - 1298927
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt-ga-gagaaaaaattaaattgtat 202  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||| | |||| || || |||||||| | || ||||||    
T  1298802 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagttgtat 1298901  T
Q  203 tgaaaatgtaaagtgacatttatttt 228  Q
    |  ||||||||||||||||| |||||    
T  1298902 tagaaatgtaaagtgacattcatttt 1298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 34225985 - 34225829
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc----- 103  Q
    ||||||||| ||||| ||||||| ||||| ||||| |||| | |||||||||| |||||||||||| ||||||||||| | |||||||||| |||         
T  34225985 catccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgccctta 34225886  T
Q  104 ----ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
         ||||||||||||||| |||||||| ||||||||||| || ||||||||||||    
T  34225885 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 34225829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 16316839 - 16316720
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    |||||||||||||||||||||||| ||||||||||| || |||| ||||||| || ||||||||||| ||||| |||  || ||||||||||| ||||||    
T  16316839 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaatttggaagaaaaaaattaaagttgtat 16316740  T
Q  203 tgaaaatgtaaagtgacatt 222  Q
    || |||| ||||||||||||    
T  16316739 tggaaatataaagtgacatt 16316720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 775906 - 776039
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaat--tatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgta 201  Q
    ||||||||||||||| |||||||| ||||||||||  | || ||| |||||||| ||||||||||||| |||||| ||   ||||||||||||| ||| |    
T  775906 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagttagaagaaaaaattaaagttgca 776005  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||| |||||| ||||| ||||||    
T  776006 ttgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 43344245 - 43344375
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgtattg 204  Q
    ||||||||||| ||  ||||||||  ||||||||||||| ||||||||| || ||||||||||| |||||||| |||  ||||||| | || ||||||||    
T  43344245 taagaaaaagataagtttaaagttgtattgaaaattatgtgagagaaaaattagagtatttattaaaggtaaagttggaagaaaaattaaagttgtattg 43344344  T
Q  205 aaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| ||| |||||||| ||||| ||||||    
T  43344345 aaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 40987201 - 40987289
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| ||||||| |||||   ||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  40987201 tccgttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaa 40987289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 41984551 - 41984416
Alignment:
Q  105 taagaaaaagacaaaa-ttaaagtttcattgaaaattatgcg--agagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttg 199  Q
    |||||| ||||||||| |||||||| ||||||||||| || |  ||||||||||| ||||||||||| |||||||| |||  |||||||| ||||| |||    
T  41984551 taagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaagttg 41984452  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||| || ||||||||| ||||||    
T  41984451 tattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 33093493 - 33093366
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgag--agaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaaa 207  Q
    |||| ||| |||||||| ||||||||||| || |||  ||||||||| || |||||||||| |||||| |||  |||||||| ||||| |||||||||||    
T  33093493 aagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaa 33093394  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||| ||||| ||||||    
T  33093393 atgtaaagtgacattcattttgaaacaa 33093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 2459905 - 2459771
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    |||||| | |||||| |||||||| ||||||||||| || ||||||  |||||| ||||||||||||| |||||| |||  || ||||||||||| |||     
T  2459905 taagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 2459806  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| |||||||||| |||||| ||||||||||||    
T  2459805 attggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 10580878 - 10581012
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    |||||| |||||||  ||||||||  |||||||||| || ||||  |||||||||||||||||||||| |||||| |||  || ||||||||||| ||||    
T  10580878 taagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 10580977  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||| |||||||| ||| ||||| ||||||    
T  10580978 attgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 39866694 - 39866824
Alignment:
Q  106 aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaag--tttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgta 201  Q
    ||||||| |||||| ||||||||  |||||||||| || |||||||||   ||||||||||||||||||||||| |||  || ||||||||||| ||| |    
T  39866694 aagaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaagttggaagaaaaaaattaaatttgca 39866793  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||| |||||||||| |||||| |||||||||    
T  39866794 ttggaaatgtaaagcgacattcattttaaaa 39866824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 14378167 - 14378321
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| ||||||| |||||  |||| ||||||  |||| ||||  ||||||||||| |||  | ||||||||||||||||| |||           
T  14378167 tccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgcccttact 14378266  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
       ||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  14378267 ttataagaaaaagataaatttaaagttgcattgaaaattatgcgagagaaaagtt 14378321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 4566143 - 4566274
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgt 200  Q
    ||||||||||| ||| |||||||| ||||||||||| || ||||||  |||||| || | |||||||| | |||| |||| | |||||| ||||| ||||    
T  4566143 taagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagttggactctttattgatgataaagttgaaaaaaaaaaattaaagttgt 4566242  T
Q  201 attgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||| ||||||||||||||||| ||||||||||    
T  4566243 attaaaaatgtaaagtgacatatattttaaaa 4566274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 214
Target Start/End: Complemental strand, 43460903 - 43460792
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgtat 202  Q
    |||| |||||||||||||||||||  ||||||||||||| ||||||||||||  |||||||||||| |||||  |||  ||||||||  | || ||||||    
T  43460903 taaggaaaagacaaaattaaagttgtattgaaaattatgtgagagaaaagttgaagtatttattgagggtaacgttggaagagaaaacttaaagttgtat 43460804  T
Q  203 tgaaaatgtaaa 214  Q
    || |||||||||    
T  43460803 tggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 25332702 - 25332569
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaatt--atgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgta 201  Q
    ||||||||||||||| ||| ||||  ||||||||||  ||| |||||||||||| ||||||||||||| | |||| |||  ||||||||||||| ||| |    
T  25332702 taagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagttggaagaaaaaattaaagttgca 25332603  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| |||||||| | ||| || ||||| ||||||    
T  25332602 ttggaaatgtaaggcgacgttcattttgaaacaa 25332569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 29795135 - 29795344
Alignment:
Q  28 gtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc---------ttaagaaaaagacaa 118  Q
    |||||||||||||||| ||| || ||||| ||||  ||||||||||| ||||||||||| |||||||||||| |||          ||||||||||||||    
T  29795135 gtcgttttagtcaattgcacgcagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaa 29795234  T
Q  119 aattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaaatgtaaagt 216  Q
      |||||||| ||||||||||| || || ||||||||| ||         || |||||| |||  || ||||||||||| |||||||| |||||||||||    
T  29795235 ctttaaagttgcattgaaaattgtgtgaaagaaaagttgga---------gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagt 29795325  T
Q  217 gacatttattttaaaacaa 235  Q
    |||||| ||||| ||||||    
T  29795326 gacattcattttgaaacaa 29795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 37106988 - 37106886
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaa 206  Q
    ||||||| ||| |||||||| ||||||||||| || |||||||||||| ||||||||||| | |||||| |||  || ||||||||||| ||||||||||    
T  37106988 aaaaagaaaaacttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaa 37106889  T
Q  207 aat 209  Q
    |||    
T  37106888 aat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 45147911 - 45147984
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataac 87  Q
    |||||||||||| ||||||||||| |||||||||| | ||||| ||||  ||||||||||| ||||||||||||    
T  45147911 gttttaaaataaatgtcgttttagccaattacacatagattaatgaatgtaatgaaataatcattagacataac 45147984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 18374831 - 18374918
Alignment:
Q  150 aaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||||| |||||| |||  ||| ||||| | ||||| ||||| ||||||||||||||||| ||||| ||||||    
T  18374831 aaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 4766234 - 4766285
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  4766234 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 4766285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 8774289 - 8774236
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||    
T  8774289 ccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaat 8774236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 45081822 - 45081886
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    |||||||||||||||| |||||||||||||  |||| |||||| |||||||||| |||| |||||    
T  45081822 ccatccgttttaaaatgagtgtcgttttagaaaattgcacacatattaaggaatgaaataaaata 45081886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 45148054 - 45148106
Alignment:
Q  184 agaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  45148054 agaaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 14378328 - 14378375
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  14378328 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 14378375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25383395 - 25383454
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||| |||||||||||||||| ||||||| ||||| ||||| ||| |||||||||||||    
T  25383395 aatactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaat 25383454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 40410573 - 40410522
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
    |||||||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  40410573 taagaaaaagacaaaattaaagttgcattgaaaattgtgtcagagaaaagtt 40410522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 441150 - 441200
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||| ||||| ||||||||||||| ||||| |||||||||||||||||    
T  441150 tccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaat 441200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 34225821 - 34225771
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  34225821 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 42005127 - 42005073
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaatt 62  Q
    ||||||||||||||||||||||||||||||  |||| |||| | |||||||||||    
T  42005127 ccatccgttttaaaataagtgtcgttttagctaatttcacatatattaaggaatt 42005073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 45372648 - 45372686
Alignment:
Q  197 ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  45372648 ttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 4566040 - 4566085
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaa 56  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  4566040 tccgttttaaaatgagtgtcgctttagtcaattacacacagattaa 4566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 11171940 - 11171888
Alignment:
Q  47 cacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||| |||| ||| ||||||| | ||||||||||||||||||||||    
T  11171940 cacaaattaagaaattgaataaaataatcaatagacataacacttttactaaa 11171888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 13562223 - 13562177
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  13562223 ttttaaaatgagtgtcgtttttgtcaattgcacacatattaaggaat 13562177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 29809050 - 29808992
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||| |||| ||||| ||||||| ||||| ||||| ||||||||||||||||| ||||    
T  29809050 ccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaat 29808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 1381916 - 1381879
Alignment:
Q  67 gaaataattattagacataacacttttactaaaatgct 104  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  1381916 gaaataatcattagacataacacttttactaaactgct 1381879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 4766292 - 4766341
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaaca 234  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||| |||||    
T  4766292 aaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaaca 4766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 18579117 - 18579150
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgtttta 36  Q
    |||| |||||||||||||||||||||||||||||    
T  18579117 atactccatccgttttaaaataagtgtcgtttta 18579150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 37107062 - 37107005
Alignment:
Q  46 acacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc 103  Q
    ||||| |||||| |||  ||||||||||||||| |||| ||||||||||||||| |||    
T  37107062 acacacattaagaaatggaatgaaataattatttgacacaacacttttactaaattgc 37107005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 42969933 - 42969900
Alignment:
Q  199 gtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||||| ||||||||||||||||||||||||||||    
T  42969933 gtattaaaaatgtaaagtgacatttattttaaaa 42969900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 44228700 - 44228611
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaatta-cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| | ||||| ||||| |||||  |||||  |||||  |||  ||||||||||| |||||| |||||||||||||||||    
T  44228700 tccgttttaaaatgaatgtcgctttagccaatttgcacacggattaaaaaatggaatgaaataatcattagatataacacttttactaaa 44228611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 29396602 - 29396654
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||| ||||| ||||||||||||| ||||| |||||| |||||||||| ||||    
T  29396602 gtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaat 29396654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32228212 - 32228176
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttag 37  Q
    |||||| |||||||||||||||| |||||||||||||    
T  32228212 taatactccatccgttttaaaatgagtgtcgttttag 32228176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 3e-55; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 15646995 - 15647215
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaaaaa 113  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||  || |||||| | ||||||||||||||||||||| || ||   ||||||||    
T  15646995 gttttaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgtaaagaaatattcattagacataacacttttactgaattgaccaagaaaaa 15647094  T
Q  114 gacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaattgtattgaaaatgtaa 213  Q
    ||||||| ||| |||  |||||||||||||| ||||||||||| ||||||||||| | |||||| ||| |||||||||  || |||||||||||||||||    
T  15647095 gacaaaactaa-gttggattgaaaattatgcaagagaaaagttggagtatttattaagggtaaagttgggagaaaaaaaaaatttgtattgaaaatgtaa 15647193  T
Q  214 agtgacatttattttaaaacaa 235  Q
    ||||||||| ||||| ||||||    
T  15647194 agtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 12851975 - 12851739
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaa 100  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||| | |||||||||| |||| ||||||| |||||  |||||||||||| |||||    
T  12851975 taatactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaaggaatgaaataaaataatcattaggtataacacttttaataaaa 12851876  T
Q  101 tgcttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-tt 198  Q
    |||  ||||||||||||||||||||||| |||| |||||| |  ||  ||||||||||||||| |||||| |||||| ||| ||| ||||||||||| ||    
T  12851875 tgcccaagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttgagtatatattgagggtaaagttgggagaaaaaaattaaagtt 12851776  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
     ||||| ||||||||||||||||| ||||| ||||||    
T  12851775 ctattggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 6377205 - 6377428
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||||||||| ||||||| ||||| ||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||  |||||    
T  6377205 tccgttttaaaatgagtgtcgctttagccaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgcccaagaa 6377304  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt--gagagaaaaaattaaattg-tattgaaa 207  Q
    ||||||||| |||||| |  ||| |||||||||||||| |||||||  |||||||||||||| |||| ||  |||| ||||||||||| || ||||||||    
T  6377305 aaagacaaacttaaagctgtattaaaaattatgcgaga-aaaagttgtagtatttattgaagataaagttaggagaaaaaaaattaaaatgttattgaaa 6377403  T
Q  208 atgtaaagtgacatttattttaaaa 232  Q
    ||||||||| ||||| |||||||||    
T  6377404 atgtaaagtaacattcattttaaaa 6377428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 45377078 - 45377297
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||| ||||| | ||||||||||  ||||||||||||||||||| ||| ||||||||| || ||||||| || || |||||||||| |||| || ||    
T  45377078 tccgtttcaaaatgattgtcgttttaaccaattacacacaaattaagaaatgaaatgaaatgatcattagacttatcatttttactaaattgctcaataa 45377177  T
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa--ttaaattgtattgaaaa 208  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||| |||||| ||| |||||||||  | || |||||||| |||    
T  45377178 aaagacaaacttaaagtttcattgaaaattgtgcgagagaaaagttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattggaaa 45377277  T
Q  209 tgtaaagtgacatttatttt 228  Q
    |||||||||||||| |||||    
T  45377278 tgtaaagtgacattcatttt 45377297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 28751330 - 28751550
Alignment:
Q  14 gttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct--------- 104  Q
    |||| ||||| ||||||||||||| ||||| |||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||| |||              
T  28751330 gtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgcccttacttta 28751429  T
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    |||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||  || ||||||||||| ||||||    
T  28751430 taagaaaaggacaaacttaaagttacattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 28751529  T
Q  203 tgaaaatgtaaagtgacattt 223  Q
    |||||||||||||||||||||    
T  28751530 tgaaaatgtaaagtgacattt 28751550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 5317496 - 5317731
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| ||||||||||||| ||||   ||| | |||||||||| |||||||||||| |||||||||||||||||||||||| |||           
T  5317496 tccgttttaaaatgagtgtcgttttaggcaatagtacatagattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttat 5317595  T
Q  105 ----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-tt 198  Q
        ||||||||||||||| |||||||| ||||||||||| || ||||||||||||  |||||||||||| |||||| |||  || ||||||||||| ||    
T  5317596 tttataagaaaaagacaaacttaaagttgcattgaaaattgtg-gagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagtt 5317694  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||| |||||||||||||| ||||| ||||||    
T  5317695 gtattgaaattgtaaagtgacattcattttgaaacaa 5317731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 12002471 - 12002244
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taaga 109  Q
    ||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||| || |||||||| |||||||||||| |||          || ||    
T  12002471 aaaatgagtgtcgttttagacaattgcacacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgcccttgttttatatga 12002372  T
Q  110 aaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaa 207  Q
    |||||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||||||||||||||  ||  || ||||||||||| |||||||| ||    
T  12002371 aaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaa 12002272  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    ||||||| ||||||| ||||||||||||    
T  12002271 atgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 15698677 - 15698905
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa-----atg--ctt---aag 108  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||| | ||||     |||  |||   |||    
T  15698677 aaaataagtgttgttttagccaattgcacacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtactttataag 15698776  T
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaa-aaaattaaa-ttgtattgaa 206  Q
    ||||||| ||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||  |||| ||||||||| |||||||| |    
T  15698777 aaaaagataaacttaaagttctattgaaaattatgtgagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtattgga 15698876  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    ||| |||||||||||| ||||||||||||    
T  15698877 aatataaagtgacattcattttaaaacaa 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 84434 - 84588
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg--ct- 104  Q
    ||||| |||| ||||| ||||||| ||||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  84434 ccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtcctt 84533  T
Q  105 ------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa 153  Q
          ||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  84534 actttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaa 84588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 234
Target Start/End: Complemental strand, 1429100 - 1428865
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||||||||| ||||| |||||||    | ||||| | |||||| |||| |||||||||||||||||| ||||||||||||||||| |||           
T  1429100 tccgttttaaaatgagtgtggttttaggtgttgacacatatattaagaaattgaatgaaataattattagatataacacttttactaaactgccctttac 1429001  T
Q  105 ----taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaatt 198  Q
        |||||||| |||||| ||||||||  |||| ||||| || |||||||||||||||||||||||||| |||||| |||  ||| ||||| |||| ||    
T  1429000 tttataagaaaaggacaaacttaaagttgaattggaaattgtgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagtt 1428901  T
Q  199 gtattgaaaatgtaaagtgacatttattttaaaaca 234  Q
    |||||  ||||||||||||||||| |||||||||||    
T  1428900 gtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 6332392 - 6332164
Alignment:
Q  19 aaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgctt---------aaga 109  Q
    ||||| ||||||| ||||  ||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||| |         | ||    
T  6332392 aaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatga 6332293  T
Q  110 aaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaa 206  Q
    ||||||||||  ||||||| ||||||||||| || |||| ||||||| ||||||||||| |  ||||| |||  ||| ||||||||||| |||| || ||    
T  6332292 aaaagacaaacataaagttacattgaaaattgtgtgagaaaaaagttggagtatttattaagagtaaagttgaaagaaaaaaaattaaagttgtgttaaa 6332193  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||| ||||||||||||    
T  6332192 aatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 40719250 - 40719020
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc----- 103  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||| ||||||||| |||||||||||| ||||||||| ||| |||||||||| |||         
T  40719250 catccgttttgaaatgagtgtcgttttagccaattgcacacaagttaaggaatgaaatgaaataatcattagacatcacatttttactaaactgccattg 40719151  T
Q  104 ----ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-t 197  Q
         || |||||||| ||| ||||||||  ||||| |||| ||  ||| ||||||| |||||||||||||||||||| |||  || ||||||||||| |    
T  40719150 ttttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagt 40719051  T
Q  198 tgtattgaaaatgtaaagtgacatttatttt 228  Q
    |||||| |||||||||| ||||||| |||||    
T  40719050 tgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 17806397 - 17806529
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtat 202  Q
    ||||||||||||||| ||||| || ||||||||||| |  |||||||||||| ||||||||||||||||||||||||  || ||||||||||| ||||||    
T  17806397 taagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaagtaaaaaattaaagttgtat 17806496  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || |||||||||| |||| | ||||||||||||    
T  17806497 tggaaatgtaaagcgacactcattttaaaacaa 17806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 44582800 - 44582927
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgag--agaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||||||||| |||||||| |||||||||||||| |||  ||||||||| ||||||||||||| |||||| |||  || ||||||||||| ||||    
T  44582800 taagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 44582899  T
Q  201 attgaaaatgtaaagtgacatttatttt 228  Q
    |||| |||||||||||||||||||||||    
T  44582900 attggaaatgtaaagtgacatttatttt 44582927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 11650187 - 11650056
Alignment:
Q  106 aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtatt 203  Q
    |||||||||||||| |||||||| ||||| ||||| || ||||||||| || ||||||||||||| |||||| |||  || ||||||||||| |||||||    
T  11650187 aagaaaaagacaaacttaaagttgcattggaaattgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtatt 11650088  T
Q  204 gaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||||||||||| ||||| ||||||    
T  11650087 gaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 17919741 - 17919967
Alignment:
Q  12 ccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------- 104  Q
    |||||| ||||| ||||||| ||||| |||||||| ||| ||||| |||| |||||||||||| |||| ||||||||||||||||||| |||            
T  17919741 ccgtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcatta-acataacacttttactaaactgcccttgttt 17919839  T
Q  105 --taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
      ||  ||||||||||| |||||||| ||||||||||| || |||| ||||||| |||||| |||||| |||||| |||  || ||||||||||| ||||    
T  17919840 tatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgt 17919939  T
Q  201 attgaaaatgtaaagtgacatttatttt 228  Q
    |||| ||||||||||||| ||| |||||    
T  17919940 attggaaatgtaaagtgatattcatttt 17919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 2245918 - 2245789
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgc--gagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaa-attaaa-ttgt 200  Q
    ||||||||||||||| |||||| | ||||||||||| ||   |||||||||||||||||||||||||| |||||| |||| ||||||| |||||| ||||    
T  2245918 taagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgt 2245819  T
Q  201 attgaaaatgtaaagtgacatttattttaa 230  Q
    ||||||||||||| |||||||| |||||||    
T  2245818 attgaaaatgtaaggtgacattcattttaa 2245789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 50349776 - 50349950
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||| ||||| ||||| | ||||| |||||  ||||||||||||||||  ||||||||||| |||||||||||||||||||||||| |||           
T  50349776 tccgtttcaaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttact 50349875  T
Q  105 ---------taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattga 170  Q
             ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  50349876 ttataattataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattga 50349950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 52403606 - 52403482
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgtat 202  Q
    |||| ||||||||||||||||||| || ||||||||||| |||||| ||||||||||||||||||| |||||| |||  | ||||||  | || ||||||    
T  52403606 taaggaaaagacaaaattaaagttgcactgaaaattatgtgagagagaagtttgagtatttattgagggtaaagttggaatagaaaacttaaagttgtat 52403507  T
Q  203 tgaaaatgtaaagtgacatttattt 227  Q
    ||||||| |||||||||||| ||||    
T  52403506 tgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 24040945 - 24041097
Alignment:
Q  13 cgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc--------- 103  Q
    ||||||||||| ||||||| ||||| ||||| ||||   ||||||||||  ||||||||||| |||||||||||||||||||||||| |||             
T  24040945 cgttttaaaatgagtgtcgctttagccaatttcacatggattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttacttt 24041044  T
Q  104 ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
     ||||||||||||||| |||||||| ||||||||||| || ||||||||||||    
T  24041045 ataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 24041097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 48259782 - 48260008
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc------- 103  Q
    ||||||| ||||| ||||||||||||| ||||| |||||| ||||||||||  |||||||||||  |||||||||||||||||| |||| |||           
T  48259782 tccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgcccttgct 48259881  T
Q  104 --ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttg 199  Q
       ||||||||||| ||| |||||||| ||||||||||| || || ||||||||||||         || |||||| |||  || ||||||||||| |||    
T  48259882 ttataagaaaaagataaacttaaagttgcattgaaaattgtgtgaaagaaaagtttga---------gagggtaaagttggaagaaaaaaattaaagttg 48259972  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| ||||||||||||||||| ||||| ||||||    
T  48259973 tattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 30006363 - 30006209
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct------ 104  Q
    ||||||| ||||| | ||||| ||||||||||| |||||| ||||| ||||| ||||||||||| ||||||||||||||| |||||||| ||||          
T  30006363 tccgtttcaaaatgaatgtcgctttagtcaattgcacacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttact 30006264  T
Q  105 ---taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
       ||||||||||| ||| |||||||| ||||||||||| |  ||||||||||||    
T  30006263 ttataagaaaaagataaatttaaagttgcattgaaaattgtttgagagaaaagtt 30006209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 254933 - 255068
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcga--gagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttg 199  Q
    ||||||||||||||| |||||||| ||||||||||| || ||  |||||||||| ||||||||||||| |||||| |||  ||| ||||||||||| |||    
T  254933 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttg 255032  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
     |||| |||||||||| |||||| ||||| ||||||    
T  255033 cattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 26252250 - 26252116
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa--gtttgagtatttattgaaggtaaaattgagagaaaaaa--ttaaattgt 200  Q
    |||||| |||||||| |||||||| ||||||||||| || |||||||||  ||| ||||||||||| | |||||| |||  ||||||||  |||| ||||    
T  26252250 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaatttaagttgt 26252151  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| ||||||||||||||||| ||||| ||||||    
T  26252150 attggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 44583971 - 44583770
Alignment:
Q  44 acacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgctt--------aagaaaaagacaaaattaaagtttcattga 135  Q
    |||||||||||||| ||| |||| ||||||| ||||||||||||| |||| ||||| ||| |        |||||||||||||| |||| ||| ||||||    
T  44583971 acacacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgccttattttataagaaaaagacaaacttaatgttgcattga 44583872  T
Q  136 aaattatgcgagagaaaagtttgagtatttattgaaggtaaaat-tgagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaac 233  Q
    ||| |||| || ||||||||| ||||| ||||| | |||||| |  ||   ||||||||||| ||||||| ||||||||| |||||||| ||||||||||    
T  44583871 aaactatgtgaaagaaaagttagagtacttattaagggtaaagtcagaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaac 44583772  T
Q  234 aa 235  Q
    ||    
T  44583771 aa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 672303 - 672394
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa 196  Q
    ||||||||||||||| ||||| || ||||||||||| || |||||||||||| ||||||||||||| |||||| |||  |||||||||||||    
T  672303 taagaaaaagacaaacttaaatttgcattgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaattaaa 672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 2459239 - 2459006
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg------ct 104  Q
    ||||||| ||||| ||||||| ||||| ||||| |||||| |||||| ||||||||||| || | |   | ||||||| ||||||||||||       ||    
T  2459239 tccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataaccttact 2459140  T
Q  105 t---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttg 199  Q
    |   |||||||| ||||| ||||||||  |||||||||| ||  |||||||||||||||||||| |||| |||||| |||  || ||||||||||| |||    
T  2459139 ttataagaaaaatacaaacttaaagttgtattgaaaattgtg--agagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaagttg 2459042  T
Q  200 tattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
     ||||||||||||||| |||||| ||||| ||||||    
T  2459041 cattgaaaatgtaaagcgacattcattttgaaacaa 2459006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 42650271 - 42650402
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagag-aaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgta 201  Q
    ||||||||||||||| ||||| || ||||||||||| || ||||| |||||||  ||||||| |||||||||||  ||  || ||||||||||| |||||    
T  42650271 taagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaaagttgaagtatttcttgaaggtaaagctggaagaaaaaaattaaagttgta 42650370  T
Q  202 ttgaaaatgtaaagtgacatttattttaaaac 233  Q
    ||  |||||||||| |||||||||||||||||    
T  42650371 ttagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 235
Target Start/End: Original strand, 43738210 - 43738408
Alignment:
Q  48 acaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgctt---------aagaaaaagacaaaattaaagtttcattgaaaa 138  Q
    |||||||||| ||| |||| ||||||||||||||||||| | |||||||||| | | |         |||||||||| |||  ||||||| | |||||||    
T  43738210 acaaattaagaaatgaaataaaataattattagacataatatttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaa 43738309  T
Q  139 ttatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaa--ttaaattgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||  | || |||||| ||  ||||||||||||  ||||| |||| ||||||||  |||| ||||||||||||||| |||||||||| ||||||||||||    
T  43738310 ttgcgtgaaagaaaaattgaagtatttattgagagtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 43929884 - 43929683
Alignment:
Q  44 acacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc---------ttaagaaaaagacaaaattaaagtttcattg 134  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||||||||| | | |          |||||||||||| || ||||||||  || |    
T  43929884 acacacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcg 43929785  T
Q  135 aaaattatgcgagagaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaa 232  Q
    ||||||||| |||||||||| | ||||||||||||| |||||| || ||  |||||||||||| |||||||| |||   ||| ||||||| ||||| |||    
T  43929784 aaaattatgtgagagaaaag-tggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaa 43929686  T
Q  233 caa 235  Q
    |||    
T  43929685 caa 43929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 43105525 - 43105609
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||| | ||||||||||| | ||| ||| || |||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  43105525 ttttaaaatgaatgtcgttttagactattgcacgcatattaagaaattgaatgaaataatcattagacataacacttttactaaa 43105609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 35149401 - 35149527
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaatta-tgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgt 200  Q
    ||||||||||| |||||||||||| |||||| ||||  ||  | | |||||||| | |||||||||||||||||||||  ||| ||||||||||| ||||    
T  35149401 taagaaaaagataaaattaaagttgcattgataatttgtgtaataaaaaagtttaaatatttattgaaggtaaaattgaaagaaaaaaaattaaagttgt 35149500  T
Q  201 attgaaaatgtaaagtgacatttattt 227  Q
    |||| |||| |||||||| ||||||||    
T  35149501 attggaaatataaagtgaaatttattt 35149527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 37437331 - 37437474
Alignment:
Q  20 aaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacac-ttttactaaaatgc---------ttaaga 109  Q
    |||| ||||||| ||||| | ||| |||||| |||||||||| |||||||||| | |||||||||||||| |||||||||| |||          |||||    
T  37437331 aaatgagtgtcgctttagcccattgcacacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgcccttactttataaga 37437430  T
Q  110 aaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa 153  Q
    |||||||||| |||||||| ||||||||||| || |||||||||    
T  37437431 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 37437474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 50158341 - 50158454
Alignment:
Q  117 aaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaa-ttgtattgaaaatgtaa 213  Q
    |||||||||||| |||| |||||| || |||||||||||| ||| |||| |||| | |||| |||  ||| ||||||||||| |||||||||||||||||    
T  50158341 aaaattaaagttgcatt-aaaattgtgtgagagaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaa 50158439  T
Q  214 agtgacatttatttt 228  Q
    ||||||||| |||||    
T  50158440 agtgacattcatttt 50158454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 28200244 - 28200379
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||| ||||| ||||||||  |||||||||| |||||||  |||||||| ||||||||||||| |||||| |||  || ||||||||||| |||     
T  28200244 taagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 28200343  T
Q  201 a-ttgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    | ||||||||||| || |||||| ||||| ||||||    
T  28200344 atttgaaaatgtagagcgacattcattttgaaacaa 28200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 11134488 - 11134614
Alignment:
Q  111 aaagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaa 207  Q
    ||||||||| ||| |||| ||||| ||||| || ||||||  |||||| ||||||||||||| || ||| |||  | || |||||||| ||| |||||||    
T  11134488 aaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaagttggaaaaagaaattaaagttgcattgaaa 11134587  T
Q  208 atgtaaagtgacatttattttaaaaca 234  Q
    ||||||||||||||| ||||| |||||    
T  11134588 atgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 13408253 - 13408308
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||||    
T  13408253 tccgttttaaaatgagtgtcgttttagccaattgcacacaaattaagaaattaaat 13408308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 48320081 - 48320144
Alignment:
Q  173 gtaaaattgagagaaaaaattaaatt-gtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  48320081 gtaaagttgaaagaaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 40060859 - 40060913
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  40060859 cacacatattaagaaatgaaatgaaataatgattagacataacacttttactaaa 40060913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10843024 - 10842959
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaat 66  Q
    |||||| |||||||||| ||||| ||||||||||||||||||| |||| | |||||||||| ||||    
T  10843024 taatactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaat 10842959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 22665067 - 22664937
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaa-aattaaa-ttgtat 202  Q
    |||||| |||||||| ||||||||  ||| |||||| || |||||||  ||| ||||||||||||| |||||| |||  |||||  ||||||  ||||||    
T  22665067 taagaacaagacaaacttaaagttgaattaaaaattgtgagagagaa--gttggagtatttattgagggtaaagttggaagaaattaattaacgttgtat 22664970  T
Q  203 tgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    || ||||||||||||||||| ||||| ||||||    
T  22664969 tggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 48009244 - 48009183
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    ||||||| ||||| ||||||||||||||||||| |||||| |||||||||| |||| |||||    
T  48009244 tccgtttcaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaataaaata 48009183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 1430459 - 1430543
Alignment:
Q  15 ttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||| |||||||||||||    |  |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||    
T  1430459 ttttaaaatgagtgtcgttttaggtgttggcacacagattaagaaatttaatgaaataataattagatataacacttttactaaa 1430543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 10690908 - 10691028
Alignment:
Q  45 cacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagtttcattga 135  Q
    |||||| |||||| ||| |||||||||||| |||||| |||||| |||||||||| |||          ||||||||||||||| |||||||| ||||||    
T  10690908 cacacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattga 10691007  T
Q  136 aaattatgcgagagaaaagtt 156  Q
    ||||| || |||| |||||||    
T  10691008 aaattgtgtgagataaaagtt 10691028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 44024670 - 44024543
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgagaga--aaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgtattgaaa 207  Q
    |||||||| ||||||||  |||||||||| || ||||||  ||||||  |||||||||||| |||||| |||  || ||||||||||| ||| |||||||    
T  44024670 aagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaa 44024571  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| | |||| ||||| ||||||    
T  44024570 atgtaaagcggcattcattttgaaacaa 44024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 5854246 - 5854380
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaatt-gagagaaaaaattaaa-ttgt 200  Q
    ||||||||||||||  |||| ||| ||||||||||| || ||||  |||||||| ||||||||||||| | |||| || ||   ||||||||||| |||     
T  5854246 taagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaattaaagttgc 5854345  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||| |||||||||| |||||||||| | ||||||    
T  5854346 attggaaatgtaaagcgacatttattctgaaacaa 5854380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 45749415 - 45749506
Alignment:
Q  8 ccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    |||||||||||||||| ||||||| ||||   |||| |||||| ||||   |||  ||| ||||||| ||||||||||||||||||||||||    
T  45749415 ccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacacttttactaaa 45749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 84598 - 84648
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  84598 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 84648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24041101 - 24041155
Alignment:
Q  182 agagaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  24041101 agaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 26582973 - 26582923
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  26582973 aaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 33087561 - 33087496
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataatta 76  Q
    ||||||||||||| |||||||  |||||| ||| |||||| |||||||||  ||||||||||||||    
T  33087561 tccgttttaaaatgagtgtcgcgttagtcgattgcacacagattaaggaacgaaatgaaataatta 33087496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 49895023 - 49894861
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatg 102  Q
    |||| |||||| ||||||||| ||||||||||| | ||||| |||||| ||||||||||  ||| ||||| | |   | ||||||| ||||||||||||     
T  49895023 atactccatccattttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttactaaaata 49894924  T
Q  103 ------ctt---aagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtt 156  Q
          |||   ||||| |||||||| |||||||| ||||||||||| || ||||||||||||    
T  49894923 accttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaaaagtt 49894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 40717277 - 40717329
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||| |||||||||||||||||||||| |||||| |||||| |||| |||||    
T  40717277 catccattttaaaataagtgtcgttttaatcaattgcacacatattacggaat 40717329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 43755260 - 43755173
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaa 99  Q
    ||||||||||||| ||||||| ||||| ||||| |||||| ||||  ||||  ||||||||||| |||| | | |||||||||||||||    
T  43755260 tccgttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataataatta-aaaaaacacttttactaaa 43755173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 35847845 - 35847904
Alignment:
Q  3 atacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaatt 62  Q
    |||| ||||||||||| |||| ||||||| |||| |||||| |||||| |||||||||||    
T  35847845 atactccatccgttttgaaatgagtgtcgctttactcaattgcacacatattaaggaatt 35847904  T

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Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 40061001 - 40061044
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  40061001 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 40061044  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 254830 - 254876
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaag 57  Q
    ||||||| ||||| ||||||| |||||||||||||||||| ||||||    
T  254830 tccgtttcaaaatgagtgtcgctttagtcaattacacacagattaag 254876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9333155 - 9333105
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||||||||    
T  9333155 aaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9356928 - 9356878
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||||||||    
T  9356928 aaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38132272 - 38132322
Alignment:
Q  186 aaaaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  38132272 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 22665169 - 22665120
Alignment:
Q  12 ccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    |||||||||||| ||||||| ||||||||||| |||||| ||||| ||||    
T  22665169 ccgttttaaaatgagtgtcgctttagtcaattgcacacagattaacgaat 22665120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 43755103 - 43755058
Alignment:
Q  184 agaaaaaattaaa-ttgtattgaaaatgtaaagtgacatttatttt 228  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||    
T  43755103 agaaaaaattaaagttgtattgaaaatgtaaagtgacgttcatttt 43755058  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 9552377 - 9552425
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaa 153  Q
    |||||| |||||||  |||||||| |||||||||||||| |||||||||    
T  9552377 taagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaa 9552425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 9552436 - 9552484
Alignment:
Q  188 aaaattaaa-ttgtattgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    ||||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50094178 - 50094214
Alignment:
Q  1 taatacaccatccgttttaaaataagtgtcgttttag 37  Q
    |||||| |||||||||||||||| |||||||||||||    
T  50094178 taatactccatccgttttaaaatgagtgtcgttttag 50094214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 158324 - 158153
Alignment:
Q  9 catccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaag 108  Q
    ||||||||||||||| ||||||||||||| |||||  ||||||||||| |||| |||| |||||||||||| | ||||||||||| |||||| | | |||    
T  158324 catccgttttaaaatgagtgtcgttttagccaattg-acacaaattaaagaatgaaataaaataattattaaagataacacttttcctaaaagg-tcaag 158227  T
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattga 182  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||||||| |||||| ||||    
T  158226 aaaaagacaaacttaaagttgcattgaaaattatgcgagagaaaagttgtagtatttattgagggtaaagttga 158153  T

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Target: scaffold0886 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 4135 - 4263
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattg--agagaaaaaattaaattgtattgaa 206  Q
    |||| |||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||| | |||| |||  ||| ||||| | ||||||||||  |    
T  4135 aaaatgacaaacttaaagtttgattgaaaattatgtgagagaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattaga 4234  T
Q  207 aatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||| ||||||||||||||||||    
T  4235 aatgtaaagtaacatttattttaaaacaa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 12001 - 12158
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgc------- 103  Q
    ||||||| ||||| ||||||| |||||  |||| |||| | ||||||||||  ||||||||||| |||||||||||||||||||||||| |||           
T  12001 tccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaaactgccttactt 12100  T
Q  104 -ttaagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgag 160  Q
      ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||    
T  12101 tataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgag 12158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 1673 - 1548
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagaga-aaaaattaaa-ttgtat 202  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||  |||||||| | |||| |||   || |||||||||| ||||||    
T  1673 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtat 1574  T
Q  203 tgaaaatgtaaagtgacatttatttt 228  Q
    || |||| |||||||||||| |||||    
T  1573 tggaaatataaagtgacattcatttt 1548  T

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Target: scaffold0060 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 31777 - 31649
Alignment:
Q  11 tccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaataattattagacataacacttttactaaaatgcttaagaa 110  Q
    ||||||| ||||| ||||| ||| ||| ||||| |||||||||||| |||| |||||||||||| |||||| ||||||||||||||||| ||   |||||    
T  31777 tccgtttcaaaatgagtgttgttgtagccaattgcacacaaattaacgaatgaaatgaaataatcattagagataacacttttactaaactgtccaagaa 31678  T
Q  111 aaagacaaaattaaagtttcattgaaaat 139  Q
    ||||| ||| ||||| ||| |||| ||||    
T  31677 aaagataaacttaaaattttattggaaat 31649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 70475 - 70609
Alignment:
Q  105 taagaaaaagacaaaattaaagtttcattgaaaattatgcgaga--gaaaagtttgagtatttattgaaggtaaaattgagag-aaaaaattaaa-ttgt 200  Q
    ||||||||| ||||| ||||||||  |||||||||| || ||||  |||||||| ||||||||||||| |||||| |||  || ||||||||||| |||     
T  70475 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 70574  T
Q  201 attgaaaatgtaaagtgacatttattttaaaacaa 235  Q
    |||||||||||||||||||||| ||||| ||||||    
T  70575 attgaaaatgtaaagtgacattcattttgaaacaa 70609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 8278 - 8156
Alignment:
Q  117 aaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagag---aaaaaattaaa-ttgtattgaaaatgta 212  Q
    |||||||||||| | ||||||||| || |||||||||||| |||||||| |||| | |||| |||| ||   ||||||||||| ||||||||||||||||    
T  8278 aaaattaaagttgctttgaaaattgtgtgagagaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgta 8179  T
Q  213 aagtgacatttattttaaaacaa 235  Q
    || ||||||| ||||| ||||||    
T  8178 aattgacattcattttgaaacaa 8156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 321851 - 321724
Alignment:
Q  112 aagacaaaattaaagtttcattgaaaattatgcgagag--aaaagtttgagtatttattgaaggtaaaattgagagaaaaaa-ttaaa-ttgtattgaaa 207  Q
    |||||||| ||||| || ||||||||||| || |||||  ||||||||||||| ||||||| |||||| |||  |||||||| ||||| |||||||| ||    
T  321851 aagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 321752  T
Q  208 atgtaaagtgacatttattttaaaacaa 235  Q
    |||||||| |||||| ||||||||||||    
T  321751 atgtaaagcgacattcattttaaaacaa 321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 7732 - 7852
Alignment:
Q  115 acaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaaattgagagaaaaaattaaa-ttgtattgaaaatgtaa 213  Q
    ||||| |||||||| ||||||||||| || ||||||||||||  ||||||||||||   |||| |||  ||||||| | ||| ||||||| |||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagattaaagttggaagaaaaattaaaagttgtatt-aaaatgtaa 7830  T
Q  214 agtgacatttattttaaaacaa 235  Q
    ||||||||| ||||||||||||    
T  7831 agtgacattcattttaaaacaa 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 16065 - 16188
Alignment:
Q  109 aaaaagacaaaattaaagtttcattgaaaattatgcgagagaaaagtttgagtatttattgaaggtaaa-attgagagaaaaaattaaa-ttgtattgaa 206  Q
    |||| |||||| |||||||| ||||||||||| || |||||||| ||| || |||||||||| ||||||  ||||   ||||||||||| ||||||| ||    
T  16065 aaaatgacaaacttaaagttgcattgaaaattgtgtgagagaaaggttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaa 16164  T
Q  207 aatgtaaagtgacatttattttaa 230  Q
    ||| ||||| ||||||||||||||    
T  16165 aatataaagagacatttattttaa 16188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 9570 - 9629
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaat 61  Q
    ||||| || ||||||| ||||| ||||||||||||| |||||||||||| ||||||||||    
T  9570 aatactccctccgtttcaaaatgagtgtcgttttagccaattacacacatattaaggaat 9629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 20991 - 21061
Alignment:
Q  2 aatacaccatccgttttaaaataagtgtcgttttagtcaattacacacaaattaaggaattaaatgaaata 72  Q
    ||||| || ||||||||||||| ||||||| ||||| ||||| |||| | |||||||||| |||| |||||    
T  20991 aatactccctccgttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaata 21061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 9412 - 9440
Alignment:
Q  9 catccgttttaaaataagtgtcgttttag 37  Q
    |||||||||||||||||||||||||||||    
T  9412 catccgttttaaaataagtgtcgttttag 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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