View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2729_low_35 (Length: 435)

Name: NF2729_low_35
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2729_low_35
NF2729_low_35
[»] chr1 (27 HSPs)
chr1 (18-273)||(30697084-30697340)
chr1 (54-241)||(4130207-4130396)
chr1 (60-241)||(46191353-46191535)
chr1 (243-308)||(41759576-41759641)
chr1 (243-331)||(45493952-45494039)
chr1 (243-309)||(41157084-41157150)
chr1 (243-322)||(3537586-3537664)
chr1 (243-298)||(39066210-39066265)
chr1 (243-298)||(45839724-45839779)
chr1 (243-309)||(14318960-14319026)
chr1 (243-305)||(48588491-48588553)
chr1 (243-308)||(5319965-5320030)
chr1 (243-315)||(26661515-26661587)
chr1 (243-331)||(30630615-30630703)
chr1 (243-299)||(37555822-37555878)
chr1 (243-299)||(37556204-37556260)
chr1 (243-307)||(41157468-41157532)
chr1 (243-319)||(50051678-50051753)
chr1 (250-309)||(41142473-41142532)
chr1 (243-273)||(32594751-32594781)
chr1 (243-309)||(34649531-34649597)
chr1 (243-309)||(50052023-50052088)
chr1 (243-320)||(22077483-22077560)
chr1 (243-284)||(26661922-26661963)
chr1 (243-308)||(32168698-32168763)
chr1 (249-308)||(4266798-4266855)
chr1 (243-299)||(40082499-40082555)
[»] chr7 (29 HSPs)
chr7 (54-241)||(16183636-16183826)
chr7 (51-241)||(8138462-8138653)
chr7 (51-241)||(8139966-8140157)
chr7 (45-215)||(30235171-30235343)
chr7 (62-197)||(5102606-5102740)
chr7 (243-328)||(45433334-45433419)
chr7 (243-319)||(1085605-1085681)
chr7 (51-154)||(36528417-36528520)
chr7 (243-331)||(28300230-28300318)
chr7 (243-309)||(40094773-40094839)
chr7 (243-319)||(7517673-7517749)
chr7 (243-306)||(37167874-37167937)
chr7 (243-310)||(45434729-45434796)
chr7 (243-309)||(6054653-6054719)
chr7 (243-309)||(30244363-30244429)
chr7 (243-309)||(37533363-37533429)
chr7 (243-331)||(40094392-40094478)
chr7 (243-308)||(47129462-47129527)
chr7 (243-307)||(36623053-36623117)
chr7 (247-330)||(22567017-22567100)
chr7 (243-318)||(41854727-41854802)
chr7 (243-309)||(23376-23442)
chr7 (243-297)||(45754808-45754862)
chr7 (246-299)||(28300577-28300630)
chr7 (243-319)||(15902393-15902468)
chr7 (251-307)||(30244453-30244509)
chr7 (251-331)||(30245256-30245335)
chr7 (251-319)||(30253671-30253739)
chr7 (243-299)||(36939742-36939798)
[»] chr3 (39 HSPs)
chr3 (243-403)||(54017453-54017613)
chr3 (54-233)||(5823280-5823461)
chr3 (54-233)||(5818518-5818699)
chr3 (54-233)||(54546015-54546195)
chr3 (54-233)||(2817268-2817448)
chr3 (54-199)||(24659141-24659285)
chr3 (60-161)||(4579255-4579357)
chr3 (63-237)||(31204781-31204954)
chr3 (243-319)||(12114551-12114627)
chr3 (243-331)||(37990616-37990704)
chr3 (243-331)||(37990954-37991042)
chr3 (243-318)||(54017806-54017881)
chr3 (243-316)||(54018190-54018263)
chr3 (243-309)||(29644901-29644967)
chr3 (243-331)||(42342365-42342453)
chr3 (243-309)||(47964914-47964980)
chr3 (243-319)||(29644570-29644646)
chr3 (51-151)||(36420132-36420232)
chr3 (243-310)||(22303657-22303724)
chr3 (249-315)||(3135447-3135513)
chr3 (243-309)||(35946615-35946681)
chr3 (87-234)||(35977111-35977258)
chr3 (254-327)||(8328374-8328447)
chr3 (243-319)||(15772947-15773023)
chr3 (243-319)||(41359480-41359556)
chr3 (243-310)||(22304662-22304729)
chr3 (243-310)||(32589796-32589863)
chr3 (244-327)||(33803233-33803316)
chr3 (243-306)||(42342092-42342155)
chr3 (243-306)||(43346793-43346856)
chr3 (243-297)||(39914345-39914399)
chr3 (243-309)||(41359764-41359830)
chr3 (200-241)||(24671173-24671214)
chr3 (247-308)||(45901811-45901872)
chr3 (243-319)||(1634304-1634379)
chr3 (243-299)||(22303964-22304020)
chr3 (243-299)||(39934964-39935020)
chr3 (242-309)||(44160546-44160611)
chr3 (243-299)||(45395662-45395718)
[»] chr6 (33 HSPs)
chr6 (54-233)||(27878714-27878895)
chr6 (54-233)||(1234832-1235013)
chr6 (54-242)||(18967998-18968189)
chr6 (44-233)||(26976126-26976317)
chr6 (54-233)||(27873995-27874176)
chr6 (60-233)||(30986639-30986818)
chr6 (52-233)||(21966682-21966862)
chr6 (68-241)||(23012520-23012691)
chr6 (95-233)||(30966783-30966923)
chr6 (243-319)||(2578824-2578900)
chr6 (243-319)||(2843648-2843724)
chr6 (243-310)||(3409753-3409820)
chr6 (243-309)||(29518596-29518662)
chr6 (243-309)||(29519013-29519079)
chr6 (54-100)||(30967674-30967720)
chr6 (243-309)||(32741272-32741338)
chr6 (243-308)||(5832027-5832092)
chr6 (243-310)||(2578441-2578508)
chr6 (243-309)||(16455000-16455066)
chr6 (243-308)||(1127453-1127518)
chr6 (243-320)||(10074351-10074428)
chr6 (243-308)||(12071691-12071756)
chr6 (243-320)||(16107771-16107848)
chr6 (243-298)||(3409352-3409407)
chr6 (243-306)||(10073618-10073681)
chr6 (243-309)||(1846841-1846907)
chr6 (247-309)||(2378223-2378285)
chr6 (243-309)||(16454668-16454734)
chr6 (243-308)||(2579109-2579174)
chr6 (243-308)||(2579872-2579937)
chr6 (243-308)||(10073991-10074056)
chr6 (243-296)||(12085046-12085099)
chr6 (243-299)||(10902439-10902495)
[»] chr4 (45 HSPs)
chr4 (60-233)||(42266034-42266209)
chr4 (60-233)||(42270753-42270928)
chr4 (54-233)||(48701826-48702007)
chr4 (55-233)||(24520031-24520211)
chr4 (54-233)||(48697136-48697318)
chr4 (60-233)||(30945488-30945662)
chr4 (54-227)||(30950188-30950362)
chr4 (54-241)||(10427402-10427592)
chr4 (62-161)||(48782932-48783031)
chr4 (243-332)||(36629330-36629419)
chr4 (243-318)||(25483429-25483504)
chr4 (243-330)||(50630731-50630818)
chr4 (243-309)||(50002519-50002585)
chr4 (102-202)||(17248012-17248112)
chr4 (243-306)||(39792860-39792923)
chr4 (243-309)||(23817678-23817744)
chr4 (51-133)||(30165895-30165977)
chr4 (243-309)||(36608658-36608724)
chr4 (243-309)||(39404111-39404177)
chr4 (243-308)||(49302999-49303064)
chr4 (243-307)||(16889535-16889599)
chr4 (247-331)||(54017570-54017654)
chr4 (242-309)||(43827531-43827598)
chr4 (114-152)||(1979567-1979605)
chr4 (247-309)||(18932746-18932808)
chr4 (243-309)||(22028366-22028432)
chr4 (243-309)||(41370450-41370516)
chr4 (243-309)||(43174234-43174300)
chr4 (243-309)||(54343005-54343071)
chr4 (243-309)||(54936289-54936354)
chr4 (243-309)||(55933121-55933187)
chr4 (243-307)||(1731646-1731710)
chr4 (243-319)||(3341221-3341297)
chr4 (247-299)||(20826314-20826366)
chr4 (243-299)||(22027968-22028024)
chr4 (243-305)||(3340900-3340962)
chr4 (243-309)||(10246012-10246078)
chr4 (243-309)||(20825929-20825995)
chr4 (243-317)||(22183253-22183327)
chr4 (54-108)||(36615364-36615418)
chr4 (243-309)||(44620752-44620818)
chr4 (243-308)||(44621095-44621160)
chr4 (243-307)||(39404491-39404555)
chr4 (179-226)||(48782877-48782925)
chr4 (247-307)||(50459818-50459878)
[»] chr8 (34 HSPs)
chr8 (54-233)||(9439377-9439558)
chr8 (54-233)||(9444097-9444278)
chr8 (243-331)||(6651587-6651673)
chr8 (243-308)||(5915960-5916025)
chr8 (244-309)||(43274634-43274699)
chr8 (243-319)||(3669780-3669856)
chr8 (243-299)||(34834969-34835025)
chr8 (243-319)||(41129081-41129157)
chr8 (243-318)||(34835302-34835377)
chr8 (243-318)||(34835568-34835643)
chr8 (243-318)||(34835834-34835909)
chr8 (243-298)||(45122067-45122122)
chr8 (243-309)||(6876861-6876927)
chr8 (243-309)||(40518164-40518230)
chr8 (243-309)||(40579268-40579334)
chr8 (243-304)||(3670153-3670214)
chr8 (243-276)||(30359702-30359735)
chr8 (243-308)||(37544490-37544555)
chr8 (243-299)||(30441178-30441234)
chr8 (243-306)||(3038292-3038355)
chr8 (246-309)||(9309451-9309513)
chr8 (243-298)||(32640542-32640597)
chr8 (243-273)||(147913-147943)
chr8 (66-108)||(4799329-4799371)
chr8 (243-309)||(8919143-8919209)
chr8 (243-331)||(30359364-30359453)
chr8 (243-299)||(1014254-1014310)
chr8 (243-299)||(6731988-6732044)
chr8 (253-309)||(9309085-9309140)
chr8 (243-319)||(20870562-20870638)
chr8 (243-319)||(20995405-20995481)
chr8 (243-319)||(32305570-32305646)
chr8 (243-299)||(45121665-45121721)
chr8 (243-311)||(45122717-45122785)
[»] chr5 (28 HSPs)
chr5 (54-233)||(41718541-41718722)
chr5 (54-233)||(41723267-41723448)
chr5 (60-233)||(29585311-29585486)
chr5 (54-233)||(34360087-34360268)
chr5 (68-233)||(34352379-34352546)
chr5 (243-330)||(41632875-41632961)
chr5 (243-309)||(15370192-15370258)
chr5 (242-319)||(3295334-3295411)
chr5 (243-319)||(6500543-6500619)
chr5 (243-309)||(40296314-40296380)
chr5 (243-331)||(624289-624377)
chr5 (247-331)||(1028494-1028578)
chr5 (243-319)||(6500915-6500991)
chr5 (243-307)||(36492218-36492282)
chr5 (255-310)||(35151101-35151156)
chr5 (243-309)||(26900016-26900082)
chr5 (243-319)||(3295004-3295080)
chr5 (243-331)||(25328028-25328116)
chr5 (247-319)||(27502025-27502097)
chr5 (243-310)||(12662650-12662717)
chr5 (255-310)||(35150810-35150865)
chr5 (243-309)||(32487486-32487552)
chr5 (243-304)||(33747864-33747925)
chr5 (243-304)||(34753029-34753090)
chr5 (243-319)||(9498644-9498719)
chr5 (243-319)||(18603109-18603185)
chr5 (243-319)||(24489195-24489271)
chr5 (247-331)||(35167815-35167899)
[»] scaffold0074 (1 HSPs)
scaffold0074 (54-241)||(27231-27421)
[»] chr2 (33 HSPs)
chr2 (60-233)||(5198666-5198841)
chr2 (60-223)||(15603018-15603183)
chr2 (54-207)||(825635-825791)
chr2 (54-207)||(830291-830447)
chr2 (51-241)||(30396913-30397104)
chr2 (51-233)||(28715893-28716075)
chr2 (243-334)||(6421824-6421914)
chr2 (243-332)||(3672794-3672883)
chr2 (62-153)||(31592923-31593015)
chr2 (243-309)||(6713070-6713136)
chr2 (243-318)||(3673161-3673236)
chr2 (247-318)||(6422207-6422278)
chr2 (243-309)||(6421719-6421785)
chr2 (243-309)||(42514742-42514808)
chr2 (51-233)||(13840242-13840420)
chr2 (122-161)||(13843869-13843908)
chr2 (243-318)||(35580714-35580789)
chr2 (243-306)||(37106281-37106344)
chr2 (243-309)||(6421478-6421544)
chr2 (243-309)||(36178170-36178236)
chr2 (243-309)||(36178604-36178670)
chr2 (243-309)||(37106017-37106083)
chr2 (243-308)||(15511495-15511560)
chr2 (251-331)||(35580415-35580495)
chr2 (243-319)||(37632588-37632662)
chr2 (243-299)||(15880356-15880412)
chr2 (243-318)||(962691-962766)
chr2 (243-297)||(33731741-33731795)
chr2 (243-305)||(40679632-40679694)
chr2 (243-320)||(40733975-40734053)
chr2 (64-113)||(9358158-9358207)
chr2 (69-161)||(12175768-12175860)
chr2 (243-291)||(33954279-33954327)
[»] scaffold0391 (1 HSPs)
scaffold0391 (243-309)||(1105-1171)
[»] scaffold0702 (1 HSPs)
scaffold0702 (242-309)||(146-213)
[»] scaffold0734 (1 HSPs)
scaffold0734 (243-299)||(5490-5546)
[»] scaffold0078 (1 HSPs)
scaffold0078 (243-299)||(5075-5131)


Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 30697084 - 30697340
Alignment:
Q  18 aatcctagctaaggatgatacatacatttaattttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaac 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30697084 aatcctagctaaggatgatacatacatttaattttgggtactagagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaac 30697183  T
Q  118 acaaaatatttacgtggaaacccctcaacaaataaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30697184 acaaaatatttacgtggaaacccctcaacaaataaggggaaaaagccacgtggcaagagtagagaactttcactaagtggaagaaattacaagacctctt 30697283  T
Q  217 tctaaatacaaagagagacaaattagtttgggtaagagtgtggtgtctctcttactt 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  30697284 tctaaatacaaggagagacaaattagtttgggtaagagtgtggtgtctctctcactt 30697340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 4130396 - 4130207
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataag 153  Q
    |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||     
T  4130396 ggtacttgagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaaaatttacgtggaaatccctcaacaaataaa 4130297  T
Q  154 gggaaaaagccacgcggcaagagtagagaactttcactaagtgga--aaaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||| |||||||||||||    
T  4130296 gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagagacaaatta 4130207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 60 - 241
Target Start/End: Complemental strand, 46191535 - 46191353
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaa 159  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  46191535 agagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacaatat-tttacgtggaaacccctcaacaaataaggggaaa 46191437  T
Q  160 aagccacgcggcaagagtagagaactttcactaagtgga--aaaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    || ||||| | ||||||||||||||||||||||||||||  | ||||||||||| ||| |||||||| || |||||||||||||    
T  46191436 aaaccacgggacaagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaatta 46191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 41759576 - 41759641
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||| ||||||||    
T  41759576 tttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagccttgatgtggacggtcccc 41759641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 45494039 - 45493952
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||| ||||||||||||||||||||| |||||||| |||||   |||||||||||| ||||||||| | ||||||  |||||||||||    
T  45494039 tttggataagagtgtggtgtctctcttccttatgtggttgttcaagcctcgatgtggacggtcccccag-ctccccccaatgacccaac 45493952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 41157084 - 41157150
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||| || ||| |||| ||||| | |||||||||||| |||||||||    
T  41157084 tttgggtaagagtgtggtgtctctattgcttgtgtggttgttctagcctcgatgtgggcggtccccc 41157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 3537664 - 3537586
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaa 322  Q
    ||||||||||||||||| ||||||||| ||| || | ||||| | |||||||||||| |||| |||||| ||||||||||    
T  3537664 tttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt-cccctggctccccttaa 3537586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 39066265 - 39066210
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtg 298  Q
    ||||| |||||||||||||||||||||||||||||| ||||| | |||| ||||||    
T  39066265 tttggataagagtgtggtgtctctcttacttatgtggttgttctagccttgatgtg 39066210  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 45839724 - 45839779
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtg 298  Q
    ||||||||||| ||||||||||||||| ||| || ||||||| |||||||||||||    
T  45839724 tttgggtaagattgtggtgtctctcttgcttgtgggattgttctggcctcgatgtg 45839779  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 14318960 - 14319026
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||||| || || | ||||| | ||||| |||||| |||||||||    
T  14318960 tttgggtaagagtgtggtgtctctcttatttgtgcggttgttctagcctcaatgtggacggtccccc 14319026  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 48588553 - 48588491
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtc 305  Q
    |||||||||||||| |||||||||||||||| || | ||||| | |||||||||||| |||||    
T  48588553 tttgggtaagagtgcggtgtctctcttacttgtgcggttgttctagcctcgatgtggacggtc 48588491  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 5320030 - 5319965
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| | ||||| |||| | ||||||||    
T  5320030 tttgggtaagagtgtagtgtctctcttgcttatgtggttgttctagcctcaatgtagacggtcccc 5319965  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 26661587 - 26661515
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactc 315  Q
    ||||||||||||||||||||||||||  ||| |||| |||||   |||||||| ||| |||||||||| ||||    
T  26661587 tttgggtaagagtgtggtgtctctctcgcttgtgtggttgttcaagcctcgatatggacggtccccctaactc 26661515  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 30630703 - 30630615
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    |||||||||||||| || ||| || | ||||||||| ||||| |||||||||||||  | ||||||| |||||| |||| || ||||||    
T  30630703 tttgggtaagagtggggcgtccctatcacttatgtggttgttctggcctcgatgtgagcagtcccccagactccacttagtgccccaac 30630615  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 37555822 - 37555878
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||||| ||| |||| |||||   ||||||||||||    
T  37555822 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtgg 37555878  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 37556204 - 37556260
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||||| ||| |||| |||||   ||||||||||||    
T  37556204 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtgg 37556260  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 41157468 - 41157532
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    |||| ||||||||||||||||| |||| ||| |||| ||||| | |||||||||||| |||||||    
T  41157468 tttgagtaagagtgtggtgtctgtcttgcttgtgtggttgttctagcctcgatgtgggcggtccc 41157532  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 50051753 - 50051678
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||| ||||||||||||||||||||||  ||||||| ||||| | || ||||||||| ||||||||||  |||||||    
T  50051753 tttgcgtaagagtgtggtgtctctcttgtttatgtg-ttgttctagcatcgatgtggacggtccccctagctcccct 50051678  T

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Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 41142473 - 41142532
Alignment:
Q  250 aagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||| ||||||||| ||| |||| ||||| | |||||||||||| |||||||||    
T  41142473 aagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtccccc 41142532  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 273
Target Start/End: Complemental strand, 32594781 - 32594751
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttactt 273  Q
    |||||||||||||||||||||||||||||||    
T  32594781 tttgggtaagagtgtggtgtctctcttactt 32594751  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 34649531 - 34649597
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||| || ||||||||| ||  |||| ||||| | |||||||||||| |||||||||    
T  34649531 tttgggtaagagtgaggcgtctctcttgctagtgtggttgttctagcctcgatgtggacggtccccc 34649597  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 50052088 - 50052023
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||||  ||||||| ||||| |  ||||||||||| | |||||||    
T  50052088 tttgggtaagagtgtggtgtctctcttgtttatgtg-ttgttctaacctcgatgtggacagtccccc 50052023  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 22077560 - 22077483
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccctt 320  Q
    ||||||||||||||||| |||||||| ||||||| | |||||   || ||||| ||| ||||||||| | ||||||||    
T  22077560 tttgggtaagagtgtggcgtctctctcacttatgcggttgttcaagcatcgatatggacggtcccccaggctcccctt 22077483  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 26661963 - 26661922
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgtt 284  Q
    ||||||||||||||||||||||||||| ||| |||| |||||    
T  26661963 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 26661922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 32168763 - 32168698
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||| ||||||||| ||| || | ||||| | |||||||||||| | ||||||    
T  32168763 tttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacagtcccc 32168698  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 4266855 - 4266798
Alignment:
Q  249 taagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    |||||||||| |||||||||||||  |||| ||||| | |||||||||||| ||||||||    
T  4266855 taagagtgtgatgtctctcttact--tgtggttgttctagcctcgatgtgggcggtcccc 4266798  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 40082499 - 40082555
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||||||||||||||||| |||||||| ||| || | ||||| | ||||||||||||    
T  40082499 tttgggtaagagtgtggtatctctcttgcttgtgcgtttgttctagcctcgatgtgg 40082555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 3e-73; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 16183636 - 16183826
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  16183636 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 16183735  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtgga--aaaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||| |||||||||||||    
T  16183736 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaatta 16183826  T

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Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 8138462 - 8138653
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||||| | || ||| |||||||||||| ||||||     
T  8138462 ttgggtagcagagtatcaaagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagtaattatgtggaaaccccttaacaaac 8138561  T
Q  151 aaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    ||||||| ||| ||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||  ||||||||||| |||||||||||||    
T  8138562 aaggggagaaaaccacgaggcaagattagagaactttcactaaatggaagaaattacaagacctccctctaaatacaaggagagacaaatta 8138653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 8139966 - 8140157
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||| ||| || |||||||| ||||||||||||||||||||    
T  8139966 ttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaatatttatgtggaaacccctcaacaaat 8140065  T
Q  151 aaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    ||||||| ||| ||| | || |||| |||| |||||||||| ||||||| |||||| ||||||||| ||| ||||||| |||||||||||||    
T  8140066 aaggggagaaaaccatggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaatacaaggagagacaaatta 8140157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 30235343 - 30235171
Alignment:
Q  45 ttaattttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctca 144  Q
    ||||| |||||||| |||||| ||||||||||| || |||||||||||| | | ||||||||||||||| |||||| |||||||||||||||||||||||    
T  30235343 ttaatgttgggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaatatttacgtggaaacccctca 30235244  T
Q  145 acaaataagggga-aaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctct 215  Q
    || |||||||||| |||| ||||| |  ||||||||| |||||||| ||| | ||| |||||||| |||||||    
T  30235243 acgaataaggggaaaaaaaccacgggataagagtagaaaactttcaataactagaagaaattacaggacctct 30235171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 5102606 - 5102740
Alignment:
Q  62 agtaacaaaatattatcacgcagctaaaataagagacgag-aaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaa 160  Q
    ||||||||||||||||||| || ||||||||| ||| ||| |||||||| ||| || ||| ||||||||| | |||| ||||||||||||||||||||||    
T  5102606 agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataatatttacat-gaaaaccctcaacaaataaggggaaaa 5102704  T
Q  161 agccacgcggcaagagtagagaactttcactaagtgg 197  Q
    | ||| |  ||||||||||| |||||| |||||||||    
T  5102705 a-ccatggagcaagagtagataacttttactaagtgg 5102740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 328
Target Start/End: Original strand, 45433334 - 45433419
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgaccc 328  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||||||||||||||| |||||||  |||||||    
T  45433334 tttgggtaagagtgtggtgtctctcttgcttgtggggttgttctagcctcgatgtggtcggtccccctggctcccctctatgaccc 45433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 1085681 - 1085605
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||||||||| ||||||||||||| |||| ||||| | |||||||||||| ||||||||||| |||||||    
T  1085681 tttgggtaagagtgtggcgtctctcttacttgtgtggttgttctagcctcgatgtggacggtccccctggctcccct 1085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 36528417 - 36528520
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||||||  ||||||||||| ||  || ||||| ||||||||||||| ||||| ||||||| | |||||| |||||||||||||||||||||| || |||    
T  36528417 ttgggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaatatttacgtggaaacccctccacgaat 36528516  T
Q  151 aagg 154  Q
    ||||    
T  36528517 aagg 36528520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 28300318 - 28300230
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||| ||||||||| |   |||| |||||  ||||||||||||| |||||| |||||||||||||| |||||||||    
T  28300318 tttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcgatgtggacggtcctcctgactccccttattgacccaac 28300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 40094839 - 40094773
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| ||||||||| ||| || | ||||| | ||||||||||||||||||||||    
T  40094839 tttgggtaagagtgtggcgtctctcttgcttgtgaggttgttctagcctcgatgtggtcggtccccc 40094773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 7517673 - 7517749
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||||||| ||| |||| |||| ||||| | ||||||||||||  ||||||| || |||||||    
T  7517673 tttgggtaagagtgtggtgtctgtctcacttgtgtggttgttctagcctcgatgtgggtggtccccttggctcccct 7517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 37167874 - 37167937
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| ||||||    
T  37167874 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 37167937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 45434729 - 45434796
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    |||||||||||||||| |||||||||||||| ||   ||||| | ||||||||||| |||||||||||    
T  45434729 tttgggtaagagtgtgatgtctctcttacttgtggagttgttctagcctcgatgtgatcggtccccct 45434796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 6054653 - 6054719
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||| ||||| | || ||||| | |||| ||||||| |||||||||    
T  6054653 tttgggtaagagtgtggtgtctctcctacttgtatggttgttctagccttgatgtggacggtccccc 6054719  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 30244363 - 30244429
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||| |||| |||| |||||   ||||||||||||  ||||||||    
T  30244363 tttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggatggtccccc 30244429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 37533429 - 37533363
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||| || ||| || | ||||| | |||||||||||| |||||||||    
T  37533429 tttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccc 37533363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 40094478 - 40094392
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| | ||| |||||| |||| ||||||  |||||||  |||||||||||    
T  40094478 tttgggtaagagtgtgacgtctttcttacttatgtggttgttctagccccgatgtagtcgatcccccaaactcccc--aatgacccaac 40094392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 47129462 - 47129527
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||||||||||||| ||| || | ||| | | |||||||||||| ||||||||    
T  47129462 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtggacggtcccc 47129527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 36623053 - 36623117
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    |||||||| |||| ||||| ||||||||||| |||||||||| || ||| ||||||| |||||||    
T  36623053 tttgggtaggagtatggtgcctctcttacttgtgtgattgttctgaccttgatgtggacggtccc 36623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 22567100 - 22567017
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaa 330  Q
    ||||||||||||||||||||||| ||| || | |||||  |||||||||||||  ||||||||   ||||||| || |||||||    
T  22567100 ggtaagagtgtggtgtctctcttgcttgtggggttgttcgggcctcgatgtggatggtcccccgagctcccctcaacgacccaa 22567017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 41854727 - 41854802
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||  |||| |||||||| || | ||||| | ||||| |||| | ||||||||||||||||||    
T  41854727 tttgggtaagagtgtgacgtctttcttacttgtgcggttgttctagcctcaatgtagacggtccccctgactcccc 41854802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 23442 - 23376
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| | | || | ||||| | |||||||| ||| |||||||||    
T  23442 tttgggtaagagtgtggtgtctctcttgcatgtgcggttgttctagcctcgatttggacggtccccc 23376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 45754808 - 45754862
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgt 297  Q
    ||||||||||||||||||||||||||| ||| |||| |||||   ||||||||||    
T  45754808 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgt 45754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 28300630 - 28300577
Alignment:
Q  246 gggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||||||||||||||||||||||| ||| |||| || || | ||||||||||||    
T  28300630 gggtaagagtgtggtgtctctcttgcttgtgtggttattctagcctcgatgtgg 28300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 15902393 - 15902468
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||| ||| ||||||||||| |||| |||| |||||||||| | |||| |||||||  |||||||| |||||||||    
T  15902393 tttggataaaagtgtggtgtcgctctcacttgtgtgattgttct-gcctggatgtgggtggtcccccggactcccct 15902468  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 30244453 - 30244509
Alignment:
Q  251 agagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    |||||||||||||||||| |||| |||| |||||   |||||||||||| |||||||    
T  30244453 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggacggtccc 30244509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 30245256 - 30245335
Alignment:
Q  251 agagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    |||||||||||||||||| |||| |||| |||||   ||||| |||||| |||||||||   |||||||| ||||||||||    
T  30245256 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcaatgtggacggtcccccatgctcccctt-atgacccaac 30245335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 30253671 - 30253739
Alignment:
Q  251 agagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||| |||| |||| |||||   |||||||||||| | ||||||| | |||||||    
T  30253671 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggactgtcccccaggctcccct 30253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 36939798 - 36939742
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||| |||||||||| |||||| |||||| | ||||| | ||||||||||||    
T  36939798 tttgggtaaaagtgtggtgtttctcttgcttatgcggttgttctagcctcgatgtgg 36939742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 243 - 403
Target Start/End: Complemental strand, 54017613 - 54017453
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaacggtcaatacgt 342  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||    
T  54017613 tttgggtaagagtgtggtgtctctattacttatgtgattgttttggcctcgatgtggtcggtccccctaactcccctctatgacccaacagtcaatacgt 54017514  T
Q  343 ctaaaaagaaatttatttttaatctcaatattattataaagagataaaaattactttaaga 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54017513 ctaaaaagaaatttatttttaatctgaatattattataaagagataaaaattactttaaga 54017453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 5823280 - 5823461
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  5823280 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 5823379  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  5823380 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 5823461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 5818518 - 5818699
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||    
T  5818518 ggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaactaataa 5818617  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  5818618 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 5818699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 54546195 - 54546015
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataag 153  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  54546195 ggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaatatttacgtggaaacccctcaacaaataag 54546096  T
Q  154 gggaaaaagccacgcggcaagagtagagaactttcactaagtgga-aaaattacaagacctctttctaaatacaaagagag 233  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||  |||||||| ||||||| ||||| ||||| |||||    
T  54546095 gggaaaaaaccacggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagag 54546015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 2817268 - 2817448
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  2817268 ggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 2817367  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
     |||||||| ||||  |||||||||| |||||| ||||||||||||| ||||||||||| |||| ||||||||||| |||||    
T  2817368 -gggaaaaaaccacagggcaagagtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagag 2817448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 24659141 - 24659285
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || | |||||||||||||||||||||||||||    
T  24659141 ggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaacaaataa 24659240  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa 199  Q
    ||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  24659241 ggggaaaaaaccacggggcaagagt--agaactttcactaagtggaa 24659285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 60 - 161
Target Start/End: Complemental strand, 4579357 - 4579255
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataaggggaa 158  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  4579357 agagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 4579258  T
Q  159 aaa 161  Q
    |||    
T  4579257 aaa 4579255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 31204781 - 31204954
Alignment:
Q  63 gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaaag 162  Q
    |||||||||||||| ||||||| ||||| |||||| || |||||||||||| ||| || |||||||||||||||||||||||||||||||| |||||||     
T  31204781 gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatatttacgtggaaacccctcaacaaataagaggaaaaaa 31204879  T
Q  163 ccac-gcggcaagagtagagaactttcactaagt-ggaaaaattacaagacctctttctaaatacaaagagagacaa 237  Q
     ||| | ||||| ||||||||||||||||||||| ||||||||||||| |||||  |||||||| || |||||||||    
T  31204880 tcacggaggcaatagtagagaactttcactaagtgggaaaaattacaaaacctc--tctaaatataaggagagacaa 31204954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 12114627 - 12114551
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||||||||||||||||||||||| || | ||||| | ||| |||||||||||||||||| |||||||||    
T  12114627 tttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagccacgatgtggtcggtcccccagactcccct 12114551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 37990704 - 37990616
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||||||||||||| ||| |||||||||| | |||||||||||| |||||||||   ||| ||| |||||||||||    
T  37990704 tttgggtaagagtgtggtgtctctcttgcttgtgtgattgttctagcctcgatgtggacggtcccccgagctctcctcaatgacccaac 37990616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 37991042 - 37990954
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||||||||||||| |||||||| ||||| | |||||||||||| ||||||| | | |||||| | ||||||||||    
T  37991042 tttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagcctcgatgtggacggtccctcaggctccccctcatgacccaac 37990954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 54017881 - 54017806
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||||||||||||||||| |||| ||||| | || ||||||||| ||||||||||| ||||||    
T  54017881 tttgggtaagagtgtggtgtctctcttacttgtgtggttgttctagcttcgatgtgggcggtccccctggctcccc 54017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 54018263 - 54018190
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcc 316  Q
    ||||||||||||||||||||||||| | ||| |||| ||||| | |||||||||||| ||||||||||||||||    
T  54018263 tttgggtaagagtgtggtgtctctcatgcttgtgtggttgttctagcctcgatgtgggcggtccccctgactcc 54018190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 29644967 - 29644901
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| ||||||||| |||||| | ||||||| |||||||||||| |||||||||    
T  29644967 tttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcctcgatgtggacggtccccc 29644901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 42342453 - 42342365
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||  ||||||||| ||| || | ||||| | ||||| |||||| ||||||||||| ||||||||| |||||||||    
T  42342453 tttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcaatgtggacggtccccctggctccccttagtgacccaac 42342365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 47964980 - 47964914
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| |||||||| |||||| |||||||| |||||| ||||||| || ||||||    
T  47964980 tttgggtaagagtgtggcgtctctctcacttatatgattgttctggcctagatgtggacgttccccc 47964914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 29644646 - 29644570
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||||||||| ||||||||| |||||| | ||||||| || |||||||||  ||||||||  ||||||||    
T  29644646 tttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcttcgatgtggatggtcccccaaactcccct 29644570  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 36420232 - 36420132
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||| |||||| ||||||||||||||||| | || ||||||| |||| ||||||| | ||||   ||||| |||||||||||||||| |  |||||||||    
T  36420232 ttggatactagggtaacaaaatattatcatgtagttaaaatatgagatgagaaaaaaagaacaacacacataatatttacgtggaaatctttcaacaaat 36420133  T
Q  151 a 151  Q
    |    
T  36420132 a 36420132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 22303724 - 22303657
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    |||||||||||||||||||| |||||||||| || ||||||| | |||||||||| | ||||| ||||    
T  22303724 tttgggtaagagtgtggtgtttctcttacttgtgcgattgttctagcctcgatgtagacggtctccct 22303657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 3135513 - 3135447
Alignment:
Q  249 taagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactc 315  Q
    |||||||||||||||||| || ||| || | ||||| | |||||||||||| |||||||||||||||    
T  3135513 taagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccctgactc 3135447  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 35946615 - 35946681
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||| ||||||||||||||||| ||| ||  |||||| | |||||||||||| |||||||||    
T  35946615 tttgggtaaaagtgtggtgtctctcttgcttgtgcaattgttctagcctcgatgtggacggtccccc 35946681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 35977258 - 35977111
Alignment:
Q  87 aaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaaagccacgcggcaagagtaga-gaact 185  Q
    ||||||||||  |||||||||| || | |||| | |||||||||||  ||| || |||||| |||  ||||||||  |||  |||||||||| | ||  |    
T  35977258 aaaataagaggtgagaaaagagaaattgaacaaacaatatttacgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagtt 35977161  T
Q  186 ttcactaagtggaaaaa-ttacaagacctctttctaaatacaaagagaga 234  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||| ||||||    
T  35977160 ttcactaagtggaaaaaattacaagacttctctctaaatacaaggagaga 35977111  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 8328374 - 8328447
Alignment:
Q  254 gtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacc 327  Q
    |||||||||||||||| ||| || | ||||||| |||||||||||| ||||||| |  |||||||| |||||||    
T  8328374 gtgtggtgtctctcttgcttgtggggttgttttagcctcgatgtggacggtcccacgaactcccctcaatgacc 8328447  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 15772947 - 15773023
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||| ||||||||||||||||||||| ||| |||| ||||| |  ||||||||||| ||||||   ||||||||||    
T  15772947 tttggataagagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtggacggtccttttgactcccct 15773023  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 41359556 - 41359480
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||||||||| |||||| || ||| || | ||||| | ||||| |||||| ||||||||| |||||||||    
T  41359556 tttgggtaagagtgtggcgtctcttttgcttgtgcggttgttctagcctcaatgtggacggtcccccagactcccct 41359480  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 22304662 - 22304729
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | | |||||||||| | ||||||||    
T  22304662 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggacagtccccct 22304729  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 32589796 - 32589863
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    |||||||||||||| | |||||||||| ||| |||| ||||| | | |||||||||| ||||||||||    
T  32589796 tttgggtaagagtgcgatgtctctcttgcttgtgtggttgttctaggctcgatgtggacggtccccct 32589863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 33803316 - 33803233
Alignment:
Q  244 ttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacc 327  Q
    |||||||||||||||| ||||| ||  ||| |||| ||||| | |||||||||||| |||||||||  |||||| | |||||||    
T  33803316 ttgggtaagagtgtggcgtctccctctcttgtgtggttgttctagcctcgatgtggacggtcccccaaactcccatcaatgacc 33803233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 42342155 - 42342092
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    ||||||||||||||||| ||||||||| ||| || | ||||| | |||||||||||| ||||||    
T  42342155 tttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 42342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 43346856 - 43346793
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | ||||| |||||| ||||||    
T  43346856 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctctatgtggacggtcc 43346793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 39914345 - 39914399
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgt 297  Q
    ||||| |||||||||||||||||||| ||||||| | ||||| | ||||||||||    
T  39914345 tttggataagagtgtggtgtctctctcacttatgcggttgttctagcctcgatgt 39914399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 41359830 - 41359764
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||| ||||| ||||||||  ||| |||| ||||| | |||||||||||| |||||||||    
T  41359830 tttgggtaagaatgtggcgtctctctcgcttgtgtggttgttctagcctcgatgtgggcggtccccc 41359764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 24671173 - 24671214
Alignment:
Q  200 aaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    |||||||||||| ||| ||||||||||| |||||||||||||    
T  24671173 aaattacaagacttctctctaaatacaaggagagacaaatta 24671214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 45901811 - 45901872
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    |||||||||||||||||||||||||||||  | ||||| |  | ||||||||| ||||||||    
T  45901811 ggtaagagtgtggtgtctctcttacttatagggttgttctaacttcgatgtggacggtcccc 45901872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 1634379 - 1634304
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||| ||| ||||||| ||| || || ||||| | |||||||||||| ||||||||||  |||||||    
T  1634379 tttgggtaagagtgcggtatctctctcact-atatggttgttctagcctcgatgtggacggtccccctagctcccct 1634304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 22304020 - 22303964
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||| ||||||||||||||||||||| |||  ||| ||||| | ||||||||||||    
T  22304020 tttggataagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtgg 22303964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 39935020 - 39934964
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||| ||||||||||| |||||||||| ||| |||| ||||| | ||||||||||||    
T  39935020 tttgagtaagagtgtgatgtctctcttgcttgtgtggttgttctagcctcgatgtgg 39934964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 44160611 - 44160546
Alignment:
Q  242 gtttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||| ||||||| ||||| |||||||||||||  | ||||||| | |||||||||||| |||||||||    
T  44160611 gttttggtaagaatgtggcgtctctcttactt--gcgattgttctagcctcgatgtggacggtccccc 44160546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 45395718 - 45395662
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||||||||||||||||||||||||| |||| || | ||| | | ||||||||||||    
T  45395718 tttgggtaagagtgtggtgtctctctcacttgtggggttgctctagcctcgatgtgg 45395662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 1e-69; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 27878714 - 27878895
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  27878714 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 27878813  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  27878814 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag 27878895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 1235013 - 1234832
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  1235013 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 1234914  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  1234913 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 1234832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 18968189 - 18967998
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||    
T  18968189 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaacaaataa 18968090  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtgga--aaaattacaagacctctttctaaatacaaagagagacaaattag 242  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||  | ||||||||||| ||| ||||||||||| ||||||||||||||    
T  18968089 ggggaaaaaaccacggggcaagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattag 18967998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 44 - 233
Target Start/End: Original strand, 26976126 - 26976317
Alignment:
Q  44 tttaattttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccct 142  Q
    |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  26976126 tttaatgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccct 26976225  T
Q  143 caacaaataaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  26976226 caacaaataaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 26976317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 27873995 - 27874176
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  27873995 ggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 27874094  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
     |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  27874095 agggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag 27874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 30986818 - 30986639
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaa---acccctcaacaaataagg-- 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||||   ||||||||||||||||||      
T  30986818 agagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaatatttacgtggaaagtacccctcaacaaataaggaa 30986719  T
Q  155 ggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
      ||||| ||||| ||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||| ||| |||||    
T  30986718 aaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagag 30986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 52 - 233
Target Start/End: Complemental strand, 21966862 - 21966682
Alignment:
Q  52 tgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaata 151  Q
    ||||||| | |||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  21966862 tgggtaccaaagtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatatttatgtggaaacccctcaataaata 21966764  T
Q  152 aggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    | ||||||||  || | ||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||| | |||||||||    
T  21966763 aagggaaaaa-tcatggggcaagagtagagaactttcactaaatggaagaaattataagacctctctctaatttcaaagagag 21966682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 23012520 - 23012691
Alignment:
Q  68 aaaatattatcacgcagctaaaataagagacgag-aaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaaagccac 166  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||| | |||||| | ||||||||||||||| | |||  || |||||||||||| |||     
T  23012520 aaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacattatttacgtggaaactcgtcacaaattaaggggaaaaa-ccat 23012618  T
Q  167 gcggcaagagtagagaactttcactaagtg-gaaaaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    | |||||||||||||||||||||||||||| || ||||| |||||||||||  ||||||||| |||||||||||||    
T  23012619 g-ggcaagagtagagaactttcactaagtgagagaaatttcaagacctctt--taaatacaatgagagacaaatta 23012691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 30966923 - 30966783
Alignment:
Q  95 agacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaa-aaagccacgcggcaagagtagagaactttcactaa 193  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| || |||  |||| |||||||||||||||||||||||||    
T  30966923 agacgagaaaagaggaactgaacacacaatatttacgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcactaa 30966824  T
Q  194 gtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    |||||| ||||| ||  |||||| ||||||| ||| |||||    
T  30966823 gtggaagaaattgcagaacctctctctaaatgcaaggagag 30966783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 2578900 - 2578824
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||||||||| || ||| |||| ||||| || ||||||||||| ||||||||| | |||||||    
T  2578900 tttgggtaagagtgtggtgtctcttttgcttgtgtggttgttctgacctcgatgtggacggtcccccaggctcccct 2578824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 2843648 - 2843724
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||| |||||||| |||  ||| ||||| | |||||||||||| |||||||||| ||||||||    
T  2843648 tttgggtaagagtgtggtatctctcttgcttgagtggttgttctagcctcgatgtggacggtccccctaactcccct 2843724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 3409753 - 3409820
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| ||||||||||    
T  3409753 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccct 3409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 29518596 - 29518662
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| |||||||||    
T  29518596 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 29518662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 29519013 - 29519079
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| |||||||||    
T  29519013 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 29519079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 30967720 - 30967674
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacga 100  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30967720 ggtaccagagtaacaaaatattatcaagcagctaaaataagagacga 30967674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 32741272 - 32741338
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| |||||||||    
T  32741272 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 32741338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 5832092 - 5832027
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||| ||||||||||||||||||||| |||| ||||| | |||||||||| | ||||||||    
T  5832092 tttgggtaaaagtgtggtgtctctcttacttgtgtggttgttctagcctcgatgtagacggtcccc 5832027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 2578508 - 2578441
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    |||||||||||||||||||||||| || ||| || | ||||| | |||||||||||| ||||||||||    
T  2578508 tttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccct 2578441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 16455000 - 16455066
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| ||||||||| ||| || | ||||| | |||||||||||| |||||||||    
T  16455000 tttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 16455066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 1127453 - 1127518
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||| |||||||||||||||||| ||| | |  |||||||||||  |||||||    
T  1127453 tttgggtaagagtgtggcgtctctcttacttatgtggttgctctaacctcgatgtgggtggtcccc 1127518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 10074428 - 10074351
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccctt 320  Q
    |||||||||||||||||||||||||| |||  |||| ||||| | ||||||||||||   ||||||| | ||||||||    
T  10074428 tttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggatagtcccccaggctcccctt 10074351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 12071756 - 12071691
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||| |||||||| |||| |||| ||||| | |||||||||||  ||||||||    
T  12071756 tttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtcccc 12071691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 16107771 - 16107848
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccctt 320  Q
    ||||||||||||||||||||||||||| ||| || | ||| | | ||||||||||||  ||| ||||| |||||||||    
T  16107771 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgctctagcctcgatgtgggtggtacccctaactcccctt 16107848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 3409352 - 3409407
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtg 298  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||    
T  3409352 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 10073681 - 10073618
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    |||||||||||||||||||||||||| |||  |||| ||||| | || ||||||||| ||||||    
T  10073681 tttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcatcgatgtggacggtcc 10073618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 1846841 - 1846907
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||| |||||||||||||||||| || ||| || | ||||| | |||||||||||| |||||||||    
T  1846841 tttggataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccc 1846907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 2378223 - 2378285
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||| ||||||||||||||| |||  ||| ||||| | |||||||||||| |||||||||    
T  2378223 ggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtccccc 2378285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 16454668 - 16454734
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||| ||||||||||| ||||||||| ||| || | ||||| | |||||||||||| |||||||||    
T  16454668 tttggataagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 16454734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 2579174 - 2579109
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||| ||||||||||||||||||||| ||  |||| ||||| | |||||||||||  ||||||||    
T  2579174 tttggctaagagtgtggtgtctctcttgctcgtgtggttgttctagcctcgatgtgcacggtcccc 2579109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 2579937 - 2579872
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||| ||||||||||||||| ||| || | ||||| | ||||||||||||  |||||||    
T  2579937 tttgggtaagaatgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggaaggtcccc 2579872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 10074056 - 10073991
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||| ||||||||||||||||  ||||| || ||||| | ||||||| |||| ||||||||    
T  10074056 tttgggtaaaagtgtggtgtctctctcgcttatttggttgttctagcctcgacgtggacggtcccc 10073991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 12085099 - 12085046
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatg 296  Q
    ||||||||||||||||| |||||||| |||| |||| ||||| | |||||||||    
T  12085099 tttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatg 12085046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 10902495 - 10902439
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||||||||||||||||||||||||| |||| | || ||||| || ||| |||||||    
T  10902495 tttgggtaagagtgtggtgtctctctcacttgtatggttgttctgacctagatgtgg 10902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 42266209 - 42266034
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaa 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  42266209 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 42266110  T
Q  159 aaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  42266109 aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag 42266034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 42270928 - 42270753
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaa 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  42270928 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 42270829  T
Q  159 aaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  42270828 aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag 42270753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 48701826 - 48702007
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  48701826 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 48701925  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  48701926 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 48702007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 55 - 233
Target Start/End: Original strand, 24520031 - 24520211
Alignment:
Q  55 gtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataag 153  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  24520031 gtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag 24520130  T
Q  154 gggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  24520131 gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 24520211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 48697136 - 48697318
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  48697136 ggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 48697235  T
Q  153 gggg-aaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  48697236 ggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 48697318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 60 - 233
Target Start/End: Original strand, 30945488 - 30945662
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataaggggaa 158  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||    
T  30945488 agagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa-gggaa 30945586  T
Q  159 aaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    |||  |||| ||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||| |||||    
T  30945587 aaaatcacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagag 30945662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 54 - 227
Target Start/End: Original strand, 30950188 - 30950362
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  30950188 ggtaccagagtaacaaaatattatcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 30950287  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaa 227  Q
     |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||  |||||| |||||||||||    
T  30950288 -gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaa 30950362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 10427592 - 10427402
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||||    
T  10427592 ggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaacaaataa 10427493  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtgga--aaaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    ||||||||| | ||| || || |||||| |||||||||||||||||  | ||||||||||| ||| ||||||||||| |||||||||||||    
T  10427492 ggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaatta 10427402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 48783031 - 48782932
Alignment:
Q  62 agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaaa 161  Q
    |||| ||||||||||||||||   |||||||||| ||||||||| ||||||| |||||| ||||||||||||||||   |||||||||||| ||||||||    
T  48783031 agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaatatttacgtggaaatttctcaacaaataaagggaaaaa 48782932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 332
Target Start/End: Original strand, 36629330 - 36629419
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaacg 332  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| | |||||||||||| ||||||| |   ||||||| ||||||||||||    
T  36629330 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcccacatgctcccctcaatgacccaacg 36629419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 25483429 - 25483504
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| | |||||||||||| ||||| ||||| ||||||    
T  25483429 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtctccctggctcccc 25483504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 50630818 - 50630731
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaa 330  Q
    ||||||||||||||||||||||||||| ||| || | ||||||| |||||||||||| |||||| |||  ||||||| | ||||||||    
T  50630818 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagcctcgatgtgggcggtccgcctagctcccctcactgacccaa 50630731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 50002519 - 50002585
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||||||| || | ||||| | |||||||||||| |||||||||    
T  50002519 tttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagcctcgatgtgggcggtccccc 50002585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 17248112 - 17248012
Alignment:
Q  102 aaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaaaa 201  Q
    ||||||| |||| || ||| ||||||||| |||||| |||| || ||||||||||||||| ||||  |  ||||||| |||||||||| |||||||||||    
T  17248112 aaaagagaaactaaatacacaatatttacatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaaaa 17248013  T
Q  202 a 202  Q
    |    
T  17248012 a 17248012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 39792923 - 39792860
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| | |||||||||||| ||||||    
T  39792923 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 39792860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 23817744 - 23817678
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||  |||| ||||| | |||||||||||| |||||||||    
T  23817744 tttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacggtccccc 23817678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 30165977 - 30165895
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtg 133  Q
    |||| |||||||||||||||||| |||||| || ||||||||||| | ||||||| | ||| | |||||| ||||||||||||    
T  30165977 ttggatactagagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataatatttacgtg 30165895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 36608724 - 36608658
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||| |||  |||| ||||| | |||||||||||| |||||||||    
T  36608724 tttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggacggtccccc 36608658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 39404111 - 39404177
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| ||||||||| ||| |||| ||||| | |||||||||||| |||||||||    
T  39404111 tttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtccccc 39404177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 49302999 - 49303064
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |  ||||||||||| || |||||    
T  49302999 tttgggtaagagtgtggtgtatctcttacttatgcgattgttctatcctcgatgtggacgatcccc 49303064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 16889599 - 16889535
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    ||||||||||||| ||||||||||||| ||| |||||||||| |  ||||||||||| |||||||    
T  16889599 tttgggtaagagtatggtgtctctcttccttgtgtgattgttctaacctcgatgtggacggtccc 16889535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 54017654 - 54017570
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    |||||||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||| ||||  |||||| |  |||||||||    
T  54017654 ggtaagagtgtgatgtctctcttgcttatgtggttgttctagcctcgatgtggacggtctccctagctccccctcctgacccaac 54017570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 43827531 - 43827598
Alignment:
Q  242 gtttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||| ||||||||||||||||||||||||| || | ||||| |  ||||||||||| |||||||||    
T  43827531 gtttggataagagtgtggtgtctctcttacttgtgcggttgttctaacctcgatgtggacggtccccc 43827598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 1979605 - 1979567
Alignment:
Q  114 taacacaaaatatttacgtggaaacccctcaacaaataa 152  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  1979605 taacacacaatatttacgtggaaacccctcaacaaataa 1979567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 18932808 - 18932746
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||||  ||| ||||| | |||||||||||  |||||||||    
T  18932808 ggtaagagtgtggtgtctctcttacttgagtggttgttatagcctcgatgtgtacggtccccc 18932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 22028432 - 22028366
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | ||||| |||||| |||||||||    
T  22028432 tttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctagcctcaatgtggacggtccccc 22028366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 41370450 - 41370516
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||| ||||||||||| |||  ||| ||||| | |||||||||||| |||||||||    
T  41370450 tttgggtaagagtgtagtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtccccc 41370516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 43174234 - 43174300
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||| |||| |||| |||||   |||| ||||||| |||||||||    
T  43174234 tttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagccttgatgtggacggtccccc 43174300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 54343071 - 54343005
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| |||  ||| ||||| | ||||||||||||  ||||||||    
T  54343071 tttgggtaagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggatggtccccc 54343005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 54936289 - 54936354
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||| || |||||| ||||| | |||||||||||| | |||||||    
T  54936289 tttgggtaagagtgtggtgtctctctcac-tatgtggttgttctagcctcgatgtggacagtccccc 54936354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 55933187 - 55933121
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||||||| |    ||||| | |||||||||||| |||||||||    
T  55933187 tttgggtaagagtgtggtgtctctcttacttgtacagttgttctagcctcgatgtggacggtccccc 55933121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 1731710 - 1731646
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    |||||||||||||||||||| |||||| ||| |||| ||||| | ||||| |||||| |||||||    
T  1731710 tttgggtaagagtgtggtgtttctcttgcttgtgtggttgttctagcctcaatgtggacggtccc 1731646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 3341221 - 3341297
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||| ||||| ||||| ||||||| || ||||  ||||||||| | |||||||||  ||||||||    
T  3341221 tttgggtaagagtgtgatgtctttcttaattatgtggttattttaacctcgatgtagacggtcccccaaactcccct 3341297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 20826314 - 20826366
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||||||||||| |||||||||| |||||| ||||||| | ||||||||||||    
T  20826314 ggtaagagtgtgatgtctctcttccttatgcgattgttctagcctcgatgtgg 20826366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 22028024 - 22027968
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||| | ||||||||||    
T  22028024 tttgggtaagaatgtggtgtctctctcgcttatgtggttgttttagtctcgatgtgg 22027968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 3340900 - 3340962
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtc 305  Q
    |||||||||||||||||||||| |||| ||| || | ||||| | |||||||||||| |||||    
T  3340900 tttgggtaagagtgtggtgtctttcttgcttgtggggttgttctagcctcgatgtggacggtc 3340962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 10246012 - 10246078
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||| ||| ||| | || ||||| | |||||||||||| || ||||||    
T  10246012 tttgggtaagagtgtggtgtctcccttgcttgtctggttgttctagcctcgatgtggacgctccccc 10246078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 20825929 - 20825995
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||| |||||| |||||| | ||||| | |||| ||||||| | |||||||    
T  20825929 tttgggtaagagtgtggtgtttctcttccttatgcggttgttctagccttgatgtggacagtccccc 20825995  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 22183327 - 22183253
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccc 317  Q
    ||||| ||||||||||| |||||||| |||| |  | ||||| | |||||||||||| ||||||||| |||||||    
T  22183327 tttggataagagtgtggcgtctctctcacttgtacggttgttctagcctcgatgtggacggtcccccagactccc 22183253  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 36615364 - 36615418
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagag 108  Q
    ||||||||||||| ||||||||||| | ||| |||||||||| | ||||||||||    
T  36615364 ggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagag 36615418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 44620752 - 44620818
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||| |||||||| ||| || | ||||| |  ||||||||||| |||||||||    
T  44620752 tttgggtaagagtgtggtttctctcttgcttgtgcggttgttatatcctcgatgtggacggtccccc 44620818  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 44621095 - 44621160
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    |||||||||||||||||||| |||||| ||| || | || || | |||||||||||| ||||||||    
T  44621095 tttgggtaagagtgtggtgtttctcttgcttgtgcggttattctagcctcgatgtggacggtcccc 44621160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 39404491 - 39404555
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    |||||| |||| ||||||||||||||| ||| |||| ||||| | |||||||||||  |||||||    
T  39404491 tttgggcaagaatgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgaacggtccc 39404555  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 48782925 - 48782877
Alignment:
Q  179 gagaactttcactaagtggaa-aaattacaagacctctttctaaataca 226  Q
    ||||||||||||||||||||| |||||| | ||||||| ||||||||||    
T  48782925 gagaactttcactaagtggaagaaattagatgacctctctctaaataca 48782877  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 50459818 - 50459878
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    |||||||| |||||||||||||| ||| |||| ||||| | |||||||||||  |||||||    
T  50459818 ggtaagagcgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgcacggtccc 50459878  T

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Target: chr8 (Bit Score: 130; Significance: 3e-67; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 9439377 - 9439558
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  9439377 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 9439476  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  9439477 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 9439558  T

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Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 9444097 - 9444278
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  9444097 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 9444196  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  9444197 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 9444278  T

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Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 6651587 - 6651673
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |  |||||||||||  ||||||||| |||||||  |||||||||||    
T  6651587 tttgggtaagagtgtggtgtctctcttgcttgtgcgattgttctaacctcgatgtggatggtccccctaactcccc--aatgacccaac 6651673  T

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Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 5915960 - 5916025
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| ||||||||    
T  5915960 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 5916025  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 43274699 - 43274634
Alignment:
Q  244 ttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||| ||||||||||||||||||||||||| | |||||   |||||||||||| |||||||||    
T  43274699 ttgggtatgagtgtggtgtctctcttacttatggggttgttccagcctcgatgtggacggtccccc 43274634  T

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Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 3669780 - 3669856
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | ||||||||||||  |||||||||  |||||||    
T  3669780 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggatggtccccctagctcccct 3669856  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 34834969 - 34835025
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| | ||||||||||||    
T  34834969 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgg 34835025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 41129081 - 41129157
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||| |||||||||||||||||||||| |||| |||||    ||||||||||| ||||||||| | |||||||    
T  41129081 tttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtcccccaggctcccct 41129157  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 34835302 - 34835377
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||||||| ||||| ||| |||| || || | |||||||||| | ||||||||||| ||||||    
T  34835302 tttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835377  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 34835568 - 34835643
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||||||| ||||| ||| |||| || || | |||||||||| | ||||||||||| ||||||    
T  34835568 tttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 34835834 - 34835909
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||||||| ||||| ||| |||| || || | |||||||||| | ||||||||||| ||||||    
T  34835834 tttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 45122122 - 45122067
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtg 298  Q
    ||||||||||||||||||||||||||||||| || | ||||| | |||||||||||    
T  45122122 tttgggtaagagtgtggtgtctctcttacttgtggggttgttctagcctcgatgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 6876927 - 6876861
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||| ||||||  || |||| ||||| | |||||||||||| |||||||||    
T  6876927 tttgggtaagagtgtggtgtttctcttgtttgtgtggttgttctagcctcgatgtggacggtccccc 6876861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 40518164 - 40518230
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| ||||||||| ||| |||| ||||| | |||| ||||||| |||||||||    
T  40518164 tttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagccttgatgtggacggtccccc 40518230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 40579334 - 40579268
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| | |||||||    
T  40579334 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggactgtccccc 40579268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 3670153 - 3670214
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggt 304  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| ||||    
T  3670153 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 3670214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 276
Target Start/End: Original strand, 30359702 - 30359735
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatg 276  Q
    ||||||||||||||||||||||||||||||||||    
T  30359702 tttgggtaagagtgtggtgtctctcttacttatg 30359735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 37544555 - 37544490
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    |||||||||||||||||||||| |||||||| || | ||||| | |||||||||||| || |||||    
T  37544555 tttgggtaagagtgtggtgtctttcttacttgtgcggttgttctagcctcgatgtggacgatcccc 37544490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 30441178 - 30441234
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | ||||||||||||    
T  30441178 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 30441234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 3038355 - 3038292
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    |||||||||||||||||  |||||||| ||| |||| ||||| | |||||||||||| ||||||    
T  3038355 tttgggtaagagtgtggcatctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 3038292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 9309451 - 9309513
Alignment:
Q  246 gggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||| |  |||||| ||||| | |||||||||||| |||||||||    
T  9309451 gggtaagagtgtggtgtctctctca-gtatgtggttgttctagcctcgatgtggacggtccccc 9309513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 32640597 - 32640542
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtg 298  Q
    ||||||||||||||| | ||||||||| ||| |||||||||| | |||||||||||    
T  32640597 tttgggtaagagtgttgcgtctctcttgcttttgtgattgttctagcctcgatgtg 32640542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 273
Target Start/End: Original strand, 147913 - 147943
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttactt 273  Q
    |||||||||||||||||||||||||||||||    
T  147913 tttgggtaagagtgtggtgtctctcttactt 147943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 4799371 - 4799329
Alignment:
Q  66 acaaaatattatcacgcagctaaaataagagacgagaaaagag 108  Q
    ||||||||||||||| | |||||||||||||| ||||||||||    
T  4799371 acaaaatattatcacactgctaaaataagagatgagaaaagag 4799329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 8919209 - 8919143
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||| |||||||||||||||||| || ||| |||| ||||| | || ||||||||| |||||||||    
T  8919209 tttggataagagtgtggtgtctcttttgcttgtgtggttgttctagcttcgatgtggacggtccccc 8919143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 30359364 - 30359453
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctga-ctccccttaatgacccaac 331  Q
    ||||||||||||||||||||||||||| ||| ||   ||||||| ||||| ||||||  ||| |||  || ||||||| |||||||||||    
T  30359364 tttgggtaagagtgtggtgtctctctttcttgtgatgttgttttagcctcaatgtggatggttccctcgagctcccctcaatgacccaac 30359453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 1014310 - 1014254
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||| | ||| || | ||||| | ||||||||||||    
T  1014310 tttgggtaagagtgtggtgtctctcctgcttgtgcggttgttctagcctcgatgtgg 1014254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 6731988 - 6732044
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||| |||||||||||||||||||||| |||||| | ||||| |  |||||||||||    
T  6731988 tttgagtaagagtgtggtgtctctcttgcttatgcggttgttctaacctcgatgtgg 6732044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 9309085 - 9309140
Alignment:
Q  253 agtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||| ||| ||||| ||||| | |||||||||||| |||||||||    
T  9309085 agtgtggtgtctctctcact-atgtggttgttctagcctcgatgtggacggtccccc 9309140  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 20870638 - 20870562
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||| ||||||||||||||||||||| ||| |||| ||||| |  ||| ||| ||| |||||| |||| |||||||    
T  20870638 tttggataagagtgtggtgtctctcttgcttgtgtggttgttctaaccttgatatggacggtcctcctggctcccct 20870562  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 20995481 - 20995405
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||| |||||||||||||| |||| |||| ||| | |||||| ||| |||  |||||| ||| |||||||    
T  20995481 tttgggtaagaatgtggtgtctctctcacttgtgtggttgctctggcctagatatgggtggtccctctggctcccct 20995405  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 32305570 - 32305646
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||| ||||||||||| |||| | |||||||||   ||||| |  ||| ||||||| |||||||||||||||||||    
T  32305570 tttggataagagtgtggcgtctttattacttatgcagttgttctaaccttgatgtggacggtccccctgactcccct 32305646  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 45121721 - 45121665
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    |||| ||||||||||| | ||||||||||||||| | ||||| | ||||||||||||    
T  45121721 tttgagtaagagtgtgatatctctcttacttatggggttgttctagcctcgatgtgg 45121665  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 45122717 - 45122785
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctg 311  Q
    |||||||| |||||||| ||||||||| ||| |||| |||||   ||||||||||||  ||||||||||    
T  45122717 tttgggtatgagtgtggcgtctctcttgcttgtgtggttgttcaagcctcgatgtggaaggtccccctg 45122785  T

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Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 41718722 - 41718541
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  41718722 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 41718623  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  41718622 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 41718541  T

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Target: chr5; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 41723448 - 41723267
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  41723448 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 41723349  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  41723348 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 41723267  T

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Target: chr5; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 60 - 233
Target Start/End: Original strand, 29585311 - 29585486
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaa 158  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  29585311 agagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 29585410  T
Q  159 aaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||||    
T  29585411 aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagag 29585486  T

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Target: chr5; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 34360268 - 34360087
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||    
T  34360268 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaacaaataa 34360169  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  34360168 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 34360087  T

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Target: chr5; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 68 - 233
Target Start/End: Complemental strand, 34352546 - 34352379
Alignment:
Q  68 aaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaaaaagccac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  34352546 aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac 34352447  T
Q  167 gcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    | ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  34352446 ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 34352379  T

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Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 330
Target Start/End: Original strand, 41632875 - 41632961
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaa 330  Q
    ||||||||||||||||||||||||||| ||| || | ||||||| | |||||||||| ||||||||| | ||||||||||||||||||    
T  41632875 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagtctcgatgtggacggtcccccag-ctccccttaatgacccaa 41632961  T

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Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 15370192 - 15370258
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || ||||||| | |||||||||||| |||||||||    
T  15370192 tttgggtaagagtgtggtgtctctcttgcttgtgggattgttctagcctcgatgtggacggtccccc 15370258  T

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Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 3295411 - 3295334
Alignment:
Q  242 gtttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||| |||||||||||| |||||||||| ||| |||| ||||| | |||||||||||| |||||||||| ||||||||    
T  3295411 gttttggtaagagtgtgttgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtccccctcactcccct 3295334  T

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Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 6500543 - 6500619
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| ||||||||| | |||||||    
T  6500543 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccaggctcccct 6500619  T

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Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 40296380 - 40296314
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||||||||||| |||||||||    
T  40296380 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 40296314  T

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Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 624289 - 624377
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    |||||||||||||||||||||||||| |||| || | ||||| | |||||||||||| |||| ||||   |||||| || |||||||||    
T  624289 tttgggtaagagtgtggtgtctctctcacttgtggggttgttctagcctcgatgtggacggttccccgagctccccctagtgacccaac 624377  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 1028578 - 1028494
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||| |||||||| |||| || | ||||| | |||||||||||| ||||||||||  ||||||| | |||||||||    
T  1028578 ggtaagagtgtggcgtctctctcacttgtgcggttgttctagcctcgatgtggacggtccccctagctcccctcagtgacccaac 1028494  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 6500915 - 6500991
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||| ||||||||||||||||||||||||| || | || || | |||||||||||| ||||||||| | |||||||    
T  6500915 tttggataagagtgtggtgtctctcttacttgtgcggttattctagcctcgatgtggacggtcccccaggctcccct 6500991  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 36492282 - 36492218
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccc 307  Q
    ||||| ||||||||||||||||||||| ||| |||| ||||| | |||||||||||| |||||||    
T  36492282 tttggataagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtccc 36492218  T

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Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 35151101 - 35151156
Alignment:
Q  255 tgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||  |||||||||    
T  35151101 tgtggtgtctctctcactaatgtgattgttttagcctcgatgtggatggtccccct 35151156  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 26900082 - 26900016
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | |||| ||||||| |||||||||    
T  26900082 tttgggtaagagtgtggtgtctctcttgcttgtgggtttgttctagccttgatgtggacggtccccc 26900016  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 3295080 - 3295004
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||| ||||||||||||||||||  || |||| ||||| | |||||||||||| | ||||||||  |||||||    
T  3295080 tttgggtatgagtgtggtgtctctcttggttgtgtggttgttgtagcctcgatgtggacagtccccctcgctcccct 3295004  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 25328028 - 25328116
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    ||||||||||||||||||||||||||| |   |||| ||||| | ||||| |||||| |||||||||   ||||||| | |||||||||    
T  25328028 tttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcaatgtggacggtcccccgagctcccctcagtgacccaac 25328116  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 27502097 - 27502025
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    ||||| ||||||||||||||||| ||| |||| ||||| |  ||||||||||| ||||||||||  |||||||    
T  27502097 ggtaaaagtgtggtgtctctcttgcttgtgtggttgttctatcctcgatgtggacggtccccctagctcccct 27502025  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 12662717 - 12662650
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    ||||||||||||||||||| || |||| ||| || | || || | |||||||||||||||||||||||    
T  12662717 tttgggtaagagtgtggtgcctttcttgcttgtggggttcttctagcctcgatgtggtcggtccccct 12662650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 35150810 - 35150865
Alignment:
Q  255 tgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccct 310  Q
    |||||||||||||| |||  |||||||||||| ||||||||||||  |||||||||    
T  35150810 tgtggtgtctctctcactagtgtgattgttttagcctcgatgtggatggtccccct 35150865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 32487486 - 32487552
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||  || |||||| |||||||| ||||| | ||||||||||||  ||||||||    
T  32487486 tttgggtaagagtgtgacgtatctcttgcttatgtggttgttctagcctcgatgtggatggtccccc 32487552  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 33747864 - 33747925
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggt 304  Q
    ||||| ||||||||||||||||||||| |||||| | ||||| | |||| ||||||| ||||    
T  33747864 tttggataagagtgtggtgtctctcttccttatgcggttgttctagccttgatgtggacggt 33747925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 34753090 - 34753029
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggt 304  Q
    ||||||||||||||||| ||||||||| ||| || | ||||| | |||||||||||| ||||    
T  34753090 tttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 34753029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 9498719 - 9498644
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||||||||||||  |||||||  || | | ||||| |||||| ||||||||||  |||||||    
T  9498719 tttgggtaagagtgtggtgtctctcttgtttatgtg-ctggtctagcctcaatgtggacggtccccctagctcccct 9498644  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 18603185 - 18603109
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||  |||||||| ||| |||| | ||| | |||||||||||| |||| | |||| |||||||    
T  18603185 tttgggtaagagtgtggcatctctcttgcttgtgtggtagttctagcctcgatgtggacggttctcctggctcccct 18603109  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 24489271 - 24489195
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||| |||||||||||| |||||| |||||| || | ||||| | | |||||||||| ||||||| | |||||||||    
T  24489271 tttgcgtaagagtgtggcgtctcttttacttgtgcggttgttctagtctcgatgtgggcggtccctcagactcccct 24489195  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 35167899 - 35167815
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaac 331  Q
    |||||||||||| ||||||||  |||  |||| ||||| | || ||||||||| | |||||||| ||||| | ||||||||||||    
T  35167899 ggtaagagtgtgatgtctctcacactagtgtggttgttctagcatcgatgtggactgtccccctaactcctcctaatgacccaac 35167815  T

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Target: scaffold0074 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 27231 - 27421
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||    
T  27231 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaacaaataa 27330  T
Q  153 ggggaaaaagccacgcggcaagagtagagaactttcactaagtgga--aaaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  | |||||||| || ||| ||||||||||| |||||||||||||    
T  27331 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaatta 27421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 5e-66; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 60 - 233
Target Start/End: Original strand, 5198666 - 5198841
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaa 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  5198666 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 5198765  T
Q  159 aaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||    
T  5198766 aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag 5198841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 15603183 - 15603018
Alignment:
Q  60 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaa 158  Q
    ||||||| ||||||||||||||||  | |||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  15603183 agagtaagaaaatattatcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 15603084  T
Q  159 aaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaat 223  Q
    ||| ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||    
T  15603083 aaaaccacggggcaagagtagagaactttcactaagtagaagaaattacaagacctctctctaaat 15603018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 825791 - 825635
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||    
T  825791 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaacaaataa 825692  T
Q  153 gggg-aaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattaca 207  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  825691 ggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca 825635  T

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Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 830447 - 830291
Alignment:
Q  54 ggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa 152  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  830447 ggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 830348  T
Q  153 gggg-aaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattaca 207  Q
    |||| ||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  830347 ggggaaaaaaaccacggggcaagagtggagaactttcactaagtggaagaaattaca 830291  T

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Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 30396913 - 30397104
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||| ||| |||||||||||||||||    
T  30396913 ttgggtgccagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacac-acatattttcgttgaaacccctcaacaaat 30397011  T
Q  151 aaggggaaaaagccacgcggcaagagtagagaac-tttcactaagtggaa-aaattacaagacctctttctaaatacaaagagagacaaatta 241  Q
    ||||| |||||  |||  ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  30397012 aagggaaaaaaatcacagggcgagagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaatta 30397104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 28716075 - 28715893
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||| ||| ||||||||||||||||||||| ||  ||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||||  ||||    
T  28716075 ttggataccagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaatatttacgtggaaacccctcattaaat 28715976  T
Q  151 aaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaa-aaattacaagacctctttctaaatacaaagagag 233  Q
    ||||||||||| ||||  |  |||| |||||||||||||| |||||||| |||||||| ||| ||| ||||||| ||| |||||    
T  28715975 aaggggaaaaa-ccacaagagaagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagag 28715893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 334
Target Start/End: Original strand, 6421824 - 6421914
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaacggt 334  Q
    |||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||| |||||||||   |||||| | |||||||||||||    
T  6421824 tttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtcccccgagctcccc-tcatgacccaacggt 6421914  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 332
Target Start/End: Original strand, 3672794 - 3672883
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactccccttaatgacccaacg 332  Q
    |||||||||||||||||||||||||||| || |||| ||||| | | |||||||||| |||| |||||| |||||| || ||||||||||    
T  3672794 tttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggacggttcccctggctccccctagtgacccaacg 3672883  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 31592923 - 31593015
Alignment:
Q  62 agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaat-atttacgtggaaacccctcaacaaataag 153  Q
    ||||||| ||||||||||| ||| || |||||||||||||||||||||||| ||||| | ||| ||||||||||||| | ||||| |||||||    
T  31592923 agtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaataaataag 31593015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 6713070 - 6713136
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||| |||||||||| |||||| ||||||| | |||||||||||| |||||||||    
T  6713070 tttgggtaagagtgtgatgtctctcttgcttatgggattgttctagcctcgatgtggacggtccccc 6713136  T

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Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 3673161 - 3673236
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||| |||||||||| |||||||||||||  |||| ||||| | |||||||||||| ||||||||||| ||||||    
T  3673161 tttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacggtccccctggctcccc 3673236  T

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Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 6422207 - 6422278
Alignment:
Q  247 ggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    ||||||||||||||||||||||| ||| |||| ||||| | |||||||||||| | |||||||||| |||||    
T  6422207 ggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggactgtccccctgattcccc 6422278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 6421719 - 6421785
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||||||||||||||||||||||||| |||| |||| |||||  ||||||||||||| |||| ||||    
T  6421719 tttgggtaagagtgtggtgtctctctaacttgtgtggttgttccggcctcgatgtggacggtacccc 6421785  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 42514742 - 42514808
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||| ||||||||||||| || | ||||| | |||||||||||| |||||||||    
T  42514742 tttgggtaagagtgtggcgtctctcttacttgtggggttgttctagcctcgatgtggacggtccccc 42514808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 13840242 - 13840420
Alignment:
Q  51 ttgggtactagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaat 150  Q
    |||||||| ||| |||||||||||||||||| |  || ||||| ||| |||||| |||||||  |||||  ||||||||| ||  ||  ||||||||||     
T  13840242 ttgggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccgaacac--aatatttacatgagaattcctcaacaaac 13840339  T
Q  151 aaggggaaaaagccacgcggcaagagtagagaactttcactaagtggaaaaattacaagacctctttctaaatacaaagagag 233  Q
    |||||| ||||  || |  ||||||||||| || ||| || ||||  ||||||||||| |||||| |||||||| || |||||    
T  13840340 aagggggaaaa--catggagcaagagtagaaaatttttaccaagtaaaaaaattacaaaacctctctctaaatataaggagag 13840420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 13843869 - 13843908
Alignment:
Q  122 aatatttacgtggaaacccctcaacaaataaggggaaaaa 161  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  13843869 aatatttacgtggaaacccctcaacaaataaggagaaaaa 13843908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 35580789 - 35580714
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    |||||||||||||| || |||||||||  || || | ||||| | |||||||||||| ||||||||||||||||||    
T  35580789 tttgggtaagagtgcggcgtctctcttgtttgtggggttgttctagcctcgatgtggacggtccccctgactcccc 35580714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 37106281 - 37106344
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcc 306  Q
    |||||||||||||||||||| |||||| ||| || ||||||| | |||||||||||| ||||||    
T  37106281 tttgggtaagagtgtggtgtttctcttgcttgtgcgattgttctagcctcgatgtggacggtcc 37106344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 6421478 - 6421544
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| || | ||||| | | |||||||||| |||||||||    
T  6421478 tttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggacggtccccc 6421544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 36178236 - 36178170
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||| ||||||| ||| |||| ||||| | |||||||||| | |||||||||    
T  36178236 tttgggtaagagtgtggtgcctctcttgcttgtgtggttgttatagcctcgatgtagacggtccccc 36178170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 36178670 - 36178604
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| | ||||| |||||| || ||||||    
T  36178670 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctctatgtggacgatccccc 36178604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 37106017 - 37106083
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||||||||||||||||| ||| |  | ||||| | |||||||||||| |||||||||    
T  37106017 tttgggtaagagtgtggtgtctctcttgcttgtacggttgttctagcctcgatgtggacggtccccc 37106083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 15511560 - 15511495
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtcccc 308  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| | | |||||||||| || |||||    
T  15511560 tttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagtctcgatgtggacgatcccc 15511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 35580495 - 35580415
Alignment:
Q  251 agagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctga-ctccccttaatgacccaac 331  Q
    ||||||||| ||||||||  || ||||||||||||| |||||||||||| |||| |||| || |||||||| ||||||||||    
T  35580495 agagtgtggcgtctctctccct-atgtgattgttttagcctcgatgtggacggttcccccgagctccccttcatgacccaac 35580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 37632662 - 37632588
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccct 319  Q
    |||||||||||||||||||| ||||||||   |||||||||| | |||||||||||| |||  |||||| |||||||    
T  37632662 tttgggtaagagtgtggtgtatctcttacaagtgtgattgttctagcctcgatgtggacgg--cccctggctcccct 37632588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 15880356 - 15880412
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||| ||||||||| ||| || | ||||||| ||||||||||||    
T  15880356 tttgggtaagagtgtggcgtctctcttgcttgtgcggttgttttagcctcgatgtgg 15880412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 962691 - 962766
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccctgactcccc 318  Q
    |||||||||||||||| |||| ||||| ||| |||| ||||| | |||||||||||| ||||| |||  |||||||    
T  962691 tttgggtaagagtgtgttgtcactcttgcttgtgtggttgttctagcctcgatgtggacggtctcccgaactcccc 962766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 33731741 - 33731795
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgt 297  Q
    ||||||||||||| ||||||||||||| |||||| | ||||| | ||||||||||    
T  33731741 tttgggtaagagtatggtgtctctcttgcttatgcggttgttctagcctcgatgt 33731795  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 40679694 - 40679632
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtc 305  Q
    ||||||||||||||||| ||||||||||||| || | ||||| | | |||||||||| |||||    
T  40679694 tttgggtaagagtgtggcgtctctcttacttgtggggttgttctagtctcgatgtggacggtc 40679632  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 40733975 - 40734053
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc-tgactcccctt 320  Q
    |||||||||||||||||||||| |||  ||| |||| |||||   | |||||||||| ||||||||| |||||||||||    
T  40733975 tttgggtaagagtgtggtgtctgtctcgcttgtgtggttgttcaagtctcgatgtggacggtcccccttgactcccctt 40734053  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 9358158 - 9358207
Alignment:
Q  64 taacaaaatattatcacgcagctaaaataagagacgagaaaagaggaact 113  Q
    |||| ||||||||| |||||||||||| || ||||||||||||| |||||    
T  9358158 taaccaaatattattacgcagctaaaacaacagacgagaaaagaagaact 9358207  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 12175768 - 12175860
Alignment:
Q  69 aaatattatcacgcagctaaaataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaaaa 161  Q
    ||||||||||||||| ||||||||| ||| || |||| || || | |||||| |||||||  ||||||||  ||||| |||||| || |||||    
T  12175768 aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttttgtggaaacatctcaataaataatggaaaaaa 12175860  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 33954327 - 33954279
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcct 291  Q
    ||||||||||||||||| |||||||| |||||| || ||||| ||||||    
T  33954327 tttgggtaagagtgtggcgtctctctcacttatatggttgttctggcct 33954279  T

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Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 1171 - 1105
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    ||||||||||||| |||||||||||||  ||||||| ||||| | |||||||||||| |||| ||||    
T  1171 tttgggtaagagtatggtgtctctcttgtttatgtggttgttctagcctcgatgtggacggttcccc 1105  T

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Target: scaffold0702 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 213 - 146
Alignment:
Q  242 gtttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtggtcggtccccc 309  Q
    |||| ||||||| ||||||||||||||| |||  ||| ||||| | |||||||||||| |||||||||    
T  213 gtttaggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtccccc 146  T

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Target: scaffold0734 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 5490 - 5546
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||||| ||| || | |||||   ||||||||||||    
T  5490 tttgggtaagagtgtggtgtctctcttgcttgtggggttgttcaagcctcgatgtgg 5546  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 5075 - 5131
Alignment:
Q  243 tttgggtaagagtgtggtgtctctcttacttatgtgattgttttggcctcgatgtgg 299  Q
    ||||||||||||||||||||||||||  |||||| | ||| | | ||||||||||||    
T  5075 tttgggtaagagtgtggtgtctctctcgcttatgcggttgctctagcctcgatgtgg 5131  T

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