View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2729_low_73 (Length: 291)
Name: NF2729_low_73
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2729_low_73 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 41247793 - 41248066
Alignment:
| Q |
1 |
tcattctgcaactagtgacccctcaaagaagagagagagtgatcatcgtagacacggagatgccgtgtctgcacattgaaagctctgtaaggaacgacac |
100 |
Q |
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| T |
41247793 |
tcattctgcaactagtgacccctcaaagaagagagagagtgatcatcgtagacacggagatgccgtgtctgcacattgaaagctctgtaaggaacgacac |
41247892 |
T |
|
| Q |
101 |
aagttgcagatatttgtctcactaccattcctcatcacttccatatgctaacattttcctgtgttgtacaccttcatcatttatttatttgtttgtgaca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41247893 |
aagttgcagatatttgtctcactaccattcctcatcacttccatatgctaacattttcctgtgttgtacaccttcatcatttatttatttgtttgtgaca |
41247992 |
T |
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| Q |
201 |
ttttcctaaaatacattcgatgcacctaaagataactcaaataagccaatcaaatactcccacggtcacatatt |
274 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41247993 |
ttttcctaaaatacattggatgcacctaaagataactcaaataagccaatcaaatactcccacggtcacatatt |
41248066 |
T |
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