View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2729_low_88 (Length: 252)
Name: NF2729_low_88
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2729_low_88 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 43144264 - 43144485
Alignment:
| Q |
16 |
aaaataatagtagtaaaattatgaatagttggactcaaataattaataatagctttttatttgagtatgggttgtaattaaggatacgttaattagtgat |
115 |
Q |
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| T |
43144264 |
aaaataatagtagtaaaattatgaatagttggactcaaataattaataatagctttttatttgagtatgggttgtaattaaggatacgttaattagtgat |
43144363 |
T |
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| Q |
116 |
taaatgaagttttgggtaatttataatagtagacgtgattaatttggcagaaacaaagttggatgatgacagaacaacacgatgcgtgcgacatgaagta |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43144364 |
taaatgaagttttgggtaatttataatagtagacgtgattaatttggcaggaaaaacgttggatgatgacagaacaacacgatgcgtgcgacatgaagta |
43144463 |
T |
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| Q |
216 |
tgtgtttcatgtcacactttag |
237 |
Q |
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| T |
43144464 |
tgtgtttcatgtcacactttag |
43144485 |
T |
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