View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2729_low_97 (Length: 238)
Name: NF2729_low_97
Description: NF2729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2729_low_97 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 51406050 - 51405831
Alignment:
| Q |
1 |
tgaaatatgcaagaacaggtttgggcaccaaaataaaatagtaaaacatgaattttgtaaacaatgatatataaaattcaaaccatacattgtctggggt |
100 |
Q |
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| T |
51406050 |
tgaaatatgcaagaacaagtttgggcaccaaaataaaatagtaaaacatgaattttgtaaacaatgatatataaaattcaaaccatacattgtctggg-t |
51405952 |
T |
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| Q |
101 |
acaataatgcgatataaatatccaacaactttaaaatgtcacggatatagactaataaagtgtctaattccgccagtatagtatagtcttgctctgaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51405951 |
acaataatgcgatataaatatccaacaactttaaaatgtcacggatatagactaataaagtgtctaattccgccagtatagtatagtcttgctctgaaag |
51405852 |
T |
|
| Q |
201 |
cttccaaagtcaccttcattt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
51405851 |
cttccaaagtcaccttcattt |
51405831 |
T |
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