View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2731_high_3 (Length: 340)
Name: NF2731_high_3
Description: NF2731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2731_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 13 - 326
Target Start/End: Complemental strand, 907727 - 907414
Alignment:
| Q |
13 |
aatatgatgattgaagaactccaaagctctttggaagctcatgaaattcgaataacagaaagtttcgctatcggaactgtatacaaagctctacgagaac |
112 |
Q |
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| T |
907727 |
aatatgatgattgaagaactccaaagctctttggaagctcatgaaattcgaataacagaaagtttcgctatcggaactgtatacaaagctctacgagaac |
907628 |
T |
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| Q |
113 |
atgtttcgagaagaggtggtgatgagaagtgataggnnnnnnngtacaaatggaaagagtggaattcaaaaggggagaaattctaaccaaaggtgataaa |
212 |
Q |
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| T |
907627 |
atgtttcgagaagagatggtgatgagaagtgataggaaaaaaagtacaaatggaaagagtggaattcaaagggggagaaattctaaccaaaggtgataaa |
907528 |
T |
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| Q |
213 |
gatcaacctaatgttcttccacgaatggtagttcgaataagggcaaaagatgttcaacaagagaaatacttggaattttgatgaacccaacagtctaagc |
312 |
Q |
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| T |
907527 |
gatcaacctaatgttcttccacgaatggtagttcgaataagggcaaaagatgttcaacaagagaaatacttggaattttgatgaacccaacagtctaagc |
907428 |
T |
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| Q |
313 |
tagtaataatttat |
326 |
Q |
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| T |
907427 |
tagtaataatttat |
907414 |
T |
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