View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2731_high_4 (Length: 318)
Name: NF2731_high_4
Description: NF2731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2731_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 45652714 - 45653009
Alignment:
| Q |
13 |
accctcaccccatatattttgactaaactgtccattttcccctcatatatacaaattaaaatgctcaannnnnnnnnnnnnctaacacattttnnnnnnn |
112 |
Q |
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| T |
45652714 |
accctcaccccatatattttgactaaactgtccattttgccctcatatatacaaattaaaatgctcaattttttactttttctaacacattttcaaaaac |
45652813 |
T |
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| Q |
113 |
nnngttctagtagacacgagataagaagagagagtaagttctatttttacaacccagatttgtggtcatatcttctccggtacacaaagaattttggaaa |
212 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |
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| T |
45652814 |
aa-gttctagtagacacgagataagaagagaaagtaagttctatttttacaacccagatttttggttctatcttttccggtacacaaagaattttggaaa |
45652912 |
T |
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| Q |
213 |
catcttctaagttattctattcataattttctaccagaaaa--ctcatacaaagtgtgttccggttcgcttatttttaccagaacatttatccaata |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45652913 |
catcttctaagttattctattcataattttctaccagaaaactctcatacaaagtgtgttccggttcgcttatttttaccagaacatttatccaata |
45653009 |
T |
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