View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2732_high_3 (Length: 451)
Name: NF2732_high_3
Description: NF2732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2732_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 7401681 - 7402115
Alignment:
| Q |
1 |
tgtatatagctttggagttgttctcttagagctactaacaggaaagaaatcagtggacnnnnnnngaactccaagagagcaagatttagtagaatgggca |
100 |
Q |
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| T |
7401681 |
tgtatatagctttggagttgttctcttagagctactaacaggaaagaaatcagtggacaaaaaaagaactccaagagagcaagatttagtagaatgggca |
7401780 |
T |
|
| Q |
101 |
aggccatcattgaaggattcacacagacttgaaagaataattgattcaagactagaagatcaatactcaattgaaggtgctagaaaattagcaatgttga |
200 |
Q |
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| T |
7401781 |
aggccatcattgaaggattcacacagacttgaaagaataattgattcaagactagaagatcaatactcaattgaaggtgctagaaaattagcaatgttga |
7401880 |
T |
|
| Q |
201 |
cttatcaatgtttaagtcatcatgataaaagtagaccaacaatgagaacagttgttaagaccttagagcatgtcatgaaattaaatgacattccaattgg |
300 |
Q |
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| T |
7401881 |
cttatcaatgtttaagtcatcatgataaaagtagaccaacaatgagaacagttgttaagaccttagagcatgtcatgaaattaaatgacattccaattgg |
7401980 |
T |
|
| Q |
301 |
tcattttgtttatgtagctcctattgaggtaacaaatattgaagtgtcactaaatgtggataaaaaaggaaatgaaaatgaatgtgatgagaatgagatc |
400 |
Q |
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| T |
7401981 |
tcattttgtttatgtagctcctattgaggtaacaaatattgaagtgtcactaaatgtggataaaaaaggaaatgaaaatgaacgtgatgagaatgagatc |
7402080 |
T |
|
| Q |
401 |
aacaaaagggttgtgaaaagtaaagatgaagaaaa |
435 |
Q |
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| T |
7402081 |
aacaaaagggttgtgaaaagtaaagatgaagaaaa |
7402115 |
T |
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