View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2732_low_2 (Length: 452)
Name: NF2732_low_2
Description: NF2732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2732_low_2 |
 |  |
|
| [»] scaffold0020 (2 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 393; Significance: 0; HSPs: 33)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 14 - 434
Target Start/End: Complemental strand, 43108189 - 43107769
Alignment:
| Q |
14 |
attattcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43108189 |
attattcttgacacttgacttgttgcatgtattcatcatgagtcacgatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcc |
43108090 |
T |
 |
| Q |
114 |
tcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaattattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgact |
213 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
43108089 |
tcttaacacttggcttgttgcatgtatttctcgtgagtcacgacaattattgcatgggtaacacttgacttattgtaagtattcctcttgacatttggct |
43107990 |
T |
 |
| Q |
214 |
tgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43107989 |
tgttgcatgtattcctcatgagtcatgacacttggtttattgcacgggtaacacctgacatgctgcatgtgtttctcttgacacttgacttgctgcatgt |
43107890 |
T |
 |
| Q |
314 |
attcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcattattcttagcacttgagatgcattttaggcgcccaaag |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43107889 |
attcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcattattcttagcacttgagatgcattttaggcgcccaaag |
43107790 |
T |
 |
| Q |
414 |
gtacaatgacagggtcttttc |
434 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
43107789 |
gtacaatgacagagtcttttc |
43107769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 356
Target Start/End: Original strand, 3343742 - 3344034
Alignment:
| Q |
69 |
tttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaa-----ttat |
163 |
Q |
| |
|
|||||||||||||||| |||||| ||| |||| || |||||||| |||| || ||||| |||||||||||||| ||| ||| || ||||| |||| |
|
|
| T |
3343742 |
tttggtttattgcatgggtaacacttgacttgctgcatgtattcatcttgacacttggtttgttgcatgtattcctcctgattcgtgacatgtggtttat |
3343841 |
T |
 |
| Q |
164 |
tgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggta |
263 |
Q |
| |
|
|| || | ||||| ||| | | || | ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| | ||||| |
|
|
| T |
3343842 |
tgaatagttaacatttgtcctcctgcatgtattcctcttgacatttggcttgttgcatgtattcctaatgagtcatcacacttggtttattgtatgggta |
3343941 |
T |
 |
| Q |
264 |
acacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaaca |
356 |
Q |
| |
|
| || | | ||||||||| || || |||||||||| ||| |||||||||| || |||||||||||| ||| | ||||||| ||||||| |
|
|
| T |
3343942 |
agacatagcttgttgcatgcattacttttgacacttggtttgttgcatgtatttctaatgagtcatgacatttggcttattgcattagtaaca |
3344034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 337
Target Start/End: Original strand, 3343138 - 3343412
Alignment:
| Q |
69 |
tttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt------a |
162 |
Q |
| |
|
||||||||||||||| ||||||| ||||||| ||| || ||| || || || ||||| |||||| ||||||| || |||||||||||| || | |
|
|
| T |
3343138 |
tttggtttattgcataagtaacacttggcttattgcattgatttcttttcacacttggtttgttgtatgtattgttcatgagtcatgacacttggtttta |
3343237 |
T |
 |
| Q |
163 |
ttgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggt |
262 |
Q |
| |
|
|| |||| ||||||||||||| |||| ||||||||||||||||||| ||||||| || ||||| ||||||||||| ||||||||||||||||| || | |
|
|
| T |
3343238 |
tttaatggataacacttgacttgatgtatgtattcctcttgacatttggcttgttgtatttattcatcatgagtcataacacttggtttattgcatggat |
3343337 |
T |
 |
| Q |
263 |
aacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttg |
337 |
Q |
| |
|
|||| || | || ||||| | |||||||||||| || | || |||||||||||||| ||||| ||||||||| |
|
|
| T |
3343338 |
tacacttggcttgctgcatttatttctcttgacatttaaattattgcatgtattcctcacgagtcgtgacacttg |
3343412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 377
Target Start/End: Original strand, 3343680 - 3343965
Alignment:
| Q |
94 |
tggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattg |
188 |
Q |
| |
|
|||||||||| ||||||||||||| | |||||||||||||||||||| | | |||||||||| || ||||||||||||||||||||||| || |
|
|
| T |
3343680 |
tggcttgttgcatgtattcctcttgaaacttggcttgttgcatgtatt---cattagtcatgacatttggtttattgcatgggtaacacttgacttgctg |
3343776 |
T |
 |
| Q |
189 |
taagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttc |
288 |
Q |
| |
|
| |||||| |||||||| ||| |||||||||||||||||| ||| || ||||| |||||||||| | | ||||| || | | ||||||| || | |
|
|
| T |
3343777 |
catgtattcatcttgacacttggtttgttgcatgtattcctcctgattcgtgacatgtggtttattgaatagttaacatttgtcctcctgcatgtattcc |
3343876 |
T |
 |
| Q |
289 |
tcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcatta |
377 |
Q |
| |
|
|||||||| ||| |||| ||||||||||||| |||||||| ||||||| || |||| ||| |||| || ||||| ||||||||||||| |
|
|
| T |
3343877 |
tcttgacatttggcttgttgcatgtattcctaatgagtcatcacacttggtttattgtatgggtaagacatagcttgttgcatgcatta |
3343965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 350
Target Start/End: Complemental strand, 39290137 - 39289947
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
||||||||||| |||||||| |||| ||| | ||||| ||||||||| ||| ||||||||||||||||||||| |||||||||||||||| |||| | |
|
|
| T |
39290137 |
ttattgcatggataacacttaacttgttgcatgtatttctcttgacacttggcttgttgcatgtattcctcatatgtcatgacacttggttcattgtata |
39290038 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatga |
350 |
Q |
| |
|
|||||| || | || ||||||| |||||||||||||||| |||| || |||| ||| || |||||||||||||||| || ||||||||| |
|
|
| T |
39290037 |
agtaacatttggcttgctgcatgtatttctcttgacacttggcttgttgtatgtgttcatcatgagtcatgacacttggtttattgcatga |
39289947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 39290176 - 39290031
Alignment:
| Q |
208 |
ttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgct |
307 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||| |||||||||| || |||||| | || |||||||||| |||||||||||||||| |||| | |
|
|
| T |
39290176 |
ttgacttgttgcatgtattc---atgagtcatcacacttagtttattgcatggataacacttaacttgttgcatgtatttctcttgacacttggcttgtt |
39290080 |
T |
 |
| Q |
308 |
gcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaaca |
356 |
Q |
| |
|
||||||||||||| | ||||||||||||| ||||||| || ||||||| |
|
|
| T |
39290079 |
gcatgtattcctcatatgtcatgacacttggttcattgtataagtaaca |
39290031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 39290139 - 39289950
Alignment:
| Q |
73 |
gtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgca |
167 |
Q |
| |
|
|||||||||||| ||||| || ||||||| ||||||| ||||| || |||||||||||||||||||| ||| | ||||||||| || |||| | |
|
|
| T |
39290139 |
gtttattgcatggataacacttaacttgttgcatgtatttctcttgacacttggcttgttgcatgtattcctcatatgtcatgacacttggttcattgta |
39290040 |
T |
 |
| Q |
168 |
tgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
| |||||| ||| ||| || | ||||| ||||||||| ||| ||||||| |||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
39290039 |
taagtaacatttggcttgctgcatgtatttctcttgacacttggcttgttgtatgtgttcatcatgagtcatgacacttggtttattgca |
39289950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 359
Target Start/End: Original strand, 26561687 - 26561854
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctct |
291 |
Q |
| |
|
||||| ||||||||| ||| |||||||||||||| | |||||| ||||||||||||| |||||| | |||| || || || | ||||| || |||| |
|
|
| T |
26561687 |
gtatttctcttgacacttggtttgttgcatgtatttcacatgagccatgacacttggtcaattgcatgtgtaatacttgggttgctacatgtattcctct |
26561786 |
T |
 |
| Q |
292 |
tgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
||||| |||||||| |||||||||| || || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
26561787 |
tgacatttgacttgttgcatgtatttttcaagattcatgacacttgatttgttgcatgagtaacactt |
26561854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 356
Target Start/End: Original strand, 3343494 - 3343647
Alignment:
| Q |
202 |
tgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttga |
301 |
Q |
| |
|
||||| ||| |||| | ||||||||||||||||||| ||||||||||||||||||| |||||||| || | || ||||||| || ||||||||||||| |
|
|
| T |
3343494 |
tgacagttggcttgctacatgtattcctcatgagtcgtgacacttggtttattgcatgggtaacatttggcttgctgcatgtattcctcttgacacttgg |
3343593 |
T |
 |
| Q |
302 |
cttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaaca |
356 |
Q |
| |
|
||| |||||| ||| | || ||||||| ||||| || ||||||||||||||| |
|
|
| T |
3343594 |
cttattgcatgctttcttggt-tgtcatgatacttggtttattgcatgagtaaca |
3343647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 333
Target Start/End: Complemental strand, 43108222 - 43108045
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacac-----ttggtttatt |
254 |
Q |
| |
|
|||||| ||||||||||||||| || || | ||||| |||||||| |||||||||||||||||||| |||||||||| || || |||||||||| |
|
|
| T |
43108222 |
ttattgtatgggtaacacttga-ttgatgcatgtattattcttgacacttgacttgttgcatgtattcatcatgagtcacgatacttgctttggtttatt |
43108124 |
T |
 |
| Q |
255 |
gcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgaca |
333 |
Q |
| |
|
||| | |||||| || | ||||| |||| || ||||| ||||||| |||| |||||||||| ||||||||||| |||| |
|
|
| T |
43108123 |
gcatgagtaacatttggcttgttgtatgtattcctcttaacacttggcttgttgcatgtatttctcgtgagtcacgaca |
43108045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 3343424 - 3343489
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
3343424 |
gtattcctcttgacatttggcttgttgcatgtattcatcatgagtcgtaacacttggtttattgca |
3343489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 419
Target Start/End: Original strand, 3343868 - 3344188
Alignment:
| Q |
105 |
atgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcct |
199 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||| || |||||||| ||| || |||| |||||||| || | ||| ||| | | ||| || |
|
|
| T |
3343868 |
atgtattcctcttgacatttggcttgttgcatgtattcctaatgagtcatcacacttggtttattgtatgggtaagacatagcttgttgcatgcattact |
3343967 |
T |
 |
| Q |
200 |
cttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacactt |
299 |
Q |
| |
|
|||||| ||| |||||||||||||| || ||||||||||||| |||| |||||||| |||||| || | | | || || || |||||||||| | |
|
|
| T |
3343968 |
tttgacacttggtttgttgcatgtatttctaatgagtcatgacatttggcttattgcattagtaacatttggccttctccacgttttcctcttgacacat |
3344067 |
T |
 |
| Q |
300 |
gacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcattattcttagcactt-gagatgcat |
398 |
Q |
| |
|
|| ||| |||||||||| ||| | |||||||| |||| || |||| ||| ||||||| || || |||||||||| ||||||| ||||| | ||||||| |
|
|
| T |
3344068 |
gatttgttgcatgtatttctcataggtcatgactcttgttttattgtatgggtaacacctaacttgttgcatgcagtattcttgacacttagggatgcat |
3344167 |
T |
 |
| Q |
399 |
tttaggcgcccaaaggtacaa |
419 |
Q |
| |
|
||||| | ||||| ||||||| |
|
|
| T |
3344168 |
tttagtcccccaatggtacaa |
3344188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 3343626 - 3343697
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatt |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| ||||||||| || | |||||||||||||||||| |
|
|
| T |
3343626 |
ttggtttattgcatgagtaacatttggcttgctgaatgcattcctcttgacacctggcttgttgcatgtatt |
3343697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 377
Target Start/End: Complemental strand, 10982392 - 10982238
Alignment:
| Q |
220 |
atgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcct |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||| | || || | | |||||| || || |||||| ||| |||| ||||||||||| | |
|
|
| T |
10982392 |
atgtattcctcatgagtcatgacacttggtttactgcattggtgatacttggcttaccgcatgtattccttttgacatttggcttgttgcatgtattcat |
10982293 |
T |
 |
| Q |
320 |
cgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcatta |
377 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||| ||||| ||| ||||||||| |
|
|
| T |
10982292 |
---gagtcatgacacttggtttattgcataagtaacacctagcttgttacatgcatta |
10982238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 349
Target Start/End: Original strand, 3343101 - 3343334
Alignment:
| Q |
122 |
cttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgt |
216 |
Q |
| |
|
|||||||||||| ||||||||||| ||| |||||||| || ||||||| |||||||||| ||||||| | ||| || || ||| ||| |||| |
|
|
| T |
3343101 |
cttggcttgttgtatgtatttctcatgaatcatgacatttggtttattgcataagtaacacttggcttattgcattgatttcttttcacacttggtttgt |
3343200 |
T |
 |
| Q |
217 |
tgcatgtattcctcatgagtcatgacacttgg-tttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtat |
315 |
Q |
| |
|
|| ||||||| |||||||||||||||||||| |||||| | || |||||| |||| || || |||| || ||||||||| ||| |||| || || ||| |
|
|
| T |
3343201 |
tgtatgtattgttcatgagtcatgacacttggttttatttaatggataacacttgacttgatgtatgtattcctcttgacatttggcttgttgtatttat |
3343300 |
T |
 |
| Q |
316 |
tcctcgtgagtcatgacacttgattcattgcatg |
349 |
Q |
| |
|
|| || |||||||| ||||||| || |||||||| |
|
|
| T |
3343301 |
tcatcatgagtcataacacttggtttattgcatg |
3343334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 333
Target Start/End: Complemental strand, 39290365 - 39290192
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
||||| ||||||||||||||| ||| ||| |||||||| |||||| || ||||||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
39290365 |
ttatttcatgggtaacacttggcttgttgcgcgtattccttttgacacatggcttgttgcatgtatttcttatgagtcattgcacttggtttattgcata |
39290266 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgaca |
333 |
Q |
| |
|
| | |||| || | | ||||| || |||||||||||| |||| |||||||||| ||| |||||||||||| |
|
|
| T |
39290265 |
gttgacacttggcttacgacatgtattcctcttgacactttactttttgcatgtatttctcatgagtcatgaca |
39290192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 3343877 - 3344140
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctta |
118 |
Q |
| |
|
|||||||| ||| |||||||||||||||| | |||||||| | ||||| |||||||| ||| |||| | | |||||||| ||| ||| || || |
|
|
| T |
3343877 |
tcttgacatttggcttgttgcatgtattcctaatgagtcatcacacttg-----gtttattgtatgggtaagacatagcttgttgcatgcattacttttg |
3343971 |
T |
 |
| Q |
119 |
acgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatttgact |
213 |
Q |
| |
|
|| ||||| ||||||||||||||||| |||||||||||| || ||||||| |||||| ||| | | | | || |||||||||||| ||| | |
|
|
| T |
3343972 |
acacttggtttgttgcatgtatttctaatgagtcatgacatttggcttattgcattagtaacatttggccttctccacgttttcctcttgacacatgatt |
3344071 |
T |
 |
| Q |
214 |
tgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatg |
282 |
Q |
| |
|
||||||||||||| ||||| |||||||| |||| ||||||| | ||||||||||| || ||||||||| |
|
|
| T |
3344072 |
tgttgcatgtatttctcataggtcatgactcttgttttattgtatgggtaacacctaacttgttgcatg |
3344140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 3343537 - 3343604
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatg |
137 |
Q |
| |
|
||||||||||||||| ||||||||||||||| || ||||||||||||| || |||||||| ||||||| |
|
|
| T |
3343537 |
ttggtttattgcatgggtaacatttggcttgctgcatgtattcctcttgacacttggcttattgcatg |
3343604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 10982330 - 10982268
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10982330 |
gtattccttttgacatttggcttgttgcatgtattc---atgagtcatgacacttggtttattgca |
10982268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 337
Target Start/End: Original strand, 3343057 - 3343231
Alignment:
| Q |
163 |
ttgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggt |
262 |
Q |
| |
|
||||||||||||||||| | || ||||| | | ||| |||||| ||| ||||||| ||||||| ||||||| |||||||| ||||||||||||| || |
|
|
| T |
3343057 |
ttgcatgggtaacacttaaattgttgtatgcgtaccttttgacacttggcttgttgtatgtatttctcatgaatcatgacatttggtttattgcataagt |
3343156 |
T |
 |
| Q |
263 |
aacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttg |
337 |
Q |
| |
|
||||| || | | |||||| ||||| || ||||||| ||| || ||||||| || |||||||||||||||| |
|
|
| T |
3343157 |
aacacttggcttattgcattgatttcttttcacacttggtttgttgtatgtattgttcatgagtcatgacacttg |
3343231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 39290366 - 39290192
Alignment:
| Q |
74 |
tttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca-----attattgcat |
168 |
Q |
| |
|
|||||| |||| |||||| ||||||||||| |||||||| || || | ||||||||||||||||||||| |||||||| || ||||||||| |
|
|
| T |
39290366 |
tttatttcatgggtaacacttggcttgttgcgcgtattccttttgacacatggcttgttgcatgtatttcttatgagtcattgcacttggtttattgcat |
39290267 |
T |
 |
| Q |
169 |
gggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgaca |
243 |
Q |
| |
|
| | ||||||| |||| | ||||||||||||||| || |||| ||||||||||| |||||||||||||||| |
|
|
| T |
39290266 |
agttgacacttggcttacgacatgtattcctcttgacactttactttttgcatgtatttctcatgagtcatgaca |
39290192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 39290098 - 39289964
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctta |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||| |||| | ||||| ||| |||| || |||||||||||||||| || ||||||| ||||| |
|
|
| T |
39290098 |
tcttgacacttggcttgttgcatgtattcctcatatgtcatgacacttg-----gttcattgtataagtaacatttggcttgctgcatgtatttctcttg |
39290004 |
T |
 |
| Q |
119 |
acgcttggcttgttgcatgtatttctcgtgagtcatgaca |
158 |
Q |
| |
|
|| |||||||||||| |||| || || |||||||||||| |
|
|
| T |
39290003 |
acacttggcttgttgtatgtgttcatcatgagtcatgaca |
39289964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 248
Target Start/End: Original strand, 3343247 - 3343413
Alignment:
| Q |
87 |
taacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttga |
181 |
Q |
| |
|
||||| ||| |||| |||||||||||||||| || ||||||||||| || |||| || |||||||| ||| || ||||||||| | ||||||| |
|
|
| T |
3343247 |
taacacttgacttgatgtatgtattcctcttgacatttggcttgttgtatttattcatcatgagtcataacacttggtttattgcatggattacacttgg |
3343346 |
T |
 |
| Q |
182 |
cttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttgg |
248 |
Q |
| |
|
||| || | |||| |||||||||||| | || |||||||||||||||| ||||| |||||||||| |
|
|
| T |
3343347 |
cttgctgcatttatttctcttgacatttaaattattgcatgtattcctcacgagtcgtgacacttgg |
3343413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 359
Target Start/End: Original strand, 26561628 - 26561764
Alignment:
| Q |
216 |
ttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtat |
315 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||| ||||||| | ||||||||| ||| ||||| |||||||||||||||| ||| ||||||||| |
|
|
| T |
26561628 |
ttgcatgtattccttatgaatcatgatacttgatttattgtatgggtaacacttga-------catgtatttctcttgacacttggtttgttgcatgtat |
26561720 |
T |
 |
| Q |
316 |
tcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
| | | |||| ||||||||||| | |||||||| |||| |||| |
|
|
| T |
26561721 |
ttcacatgagccatgacacttggtcaattgcatgtgtaatactt |
26561764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 26561853 - 26561920
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgt |
138 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| || ||||| ||||||| || ||||||||||||||||| |
|
|
| T |
26561853 |
ttggtttattgcatgagtaacacttgacttgctgcatgta-tcctcttgacacttggcttgttgcatgt |
26561920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 39289911 - 39289836
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacac |
267 |
Q |
| |
|
||||||||||| | | |||| |||||||| |||||| |||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
39289911 |
gtattcctcttaaaagttgatttgttgcacgtattcttcatgagtcagttcacttggtttatcgcaggggtaacac |
39289836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 36141537 - 36141631
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttatt |
254 |
Q |
| |
|
|||||||||| ||||||||||||||| | ||||| ||| ||||||| | ||||| |||||||| || ||||||||||||||||| |||||| |
|
|
| T |
36141537 |
ttattgcatgtgtaacacttgacttacaacatgtatttttctagacatttcatttgttacatgtattacttatgagtcatgacacttgatttatt |
36141631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 39290245 - 39290157
Alignment:
| Q |
105 |
atgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaattattgcatgggtaacacttgacttattgtaagtattc |
197 |
Q |
| |
|
||||||||||||| || ||| ||| ||||||||||||||| ||||||||||| | |||||| |||||||||||||| ||| | |||||| |
|
|
| T |
39290245 |
atgtattcctcttgacactttactttttgcatgtatttctcatgagtcatgac----agtgcatgagtaacacttgacttgttgcatgtattc |
39290157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 3343431 - 3343469
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtc |
57 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
3343431 |
tcttgacatttggcttgttgcatgtattcatcatgagtc |
3343469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 26561858 - 26561935
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtca |
238 |
Q |
| |
|
|||||||||| |||||||||||||| || | |||| |||||||||| ||| |||||||||||| | ||||| |||||| |
|
|
| T |
26561858 |
ttattgcatgagtaacacttgacttgctgcatgtat-cctcttgacacttggcttgttgcatgtttccctcacgagtca |
26561935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 3343410 - 3343458
Alignment:
| Q |
93 |
ttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatt |
141 |
Q |
| |
|
|||||||| || ||||||||||||| || ||||||||||||||||||| |
|
|
| T |
3343410 |
ttggcttgctgcatgtattcctcttgacatttggcttgttgcatgtatt |
3343458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 349
Target Start/End: Original strand, 3343419 - 3343491
Alignment:
| Q |
277 |
tgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatg |
349 |
Q |
| |
|
||||||| || ||||||||| ||| |||| ||||||||||| || |||||| | ||||||| || |||||||| |
|
|
| T |
3343419 |
tgcatgtattcctcttgacatttggcttgttgcatgtattcatcatgagtcgtaacacttggtttattgcatg |
3343491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 26561849 - 26561920
Alignment:
| Q |
241 |
acacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgt |
313 |
Q |
| |
|
||||||||||||||||| | ||||||| |||| || ||||||| | ||||||||||||| |||| ||||||| |
|
|
| T |
26561849 |
acacttggtttattgcatgagtaacacttgacttgctgcatgt-atcctcttgacacttggcttgttgcatgt |
26561920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 70 - 382
Target Start/End: Original strand, 3203688 - 3204005
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaattattg---- |
165 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||| ||||||||||||| | |||| |||||||| |||||| ||| |||||||||||| || || |
|
|
| T |
3203688 |
ttggtttattgcatggataacagttgacttgttgcatgtattcctcttgagacttgacttgttgcctgtattcctcatgagtcatgacacttgttttatg |
3203787 |
T |
 |
| Q |
166 |
-catgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaa |
264 |
Q |
| |
|
||||||||||| ||| ||| || | ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
3203788 |
acatgggtaacatttggctttctgcatgtatttctcttgacacttggcttgttggatgtattcctcatgagtcatgacgcttggtttattgcatgggtaa |
3203887 |
T |
 |
| Q |
265 |
cacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagcta |
364 |
Q |
| |
|
|| |||| || | ||||| |||||||| |||||||||||| ||||||||||| || ||| |||||||||||| || ||||||| ||||||||| |||| |
|
|
| T |
3203888 |
catttgacttgctacatgtatttctcttaacacttgacttgttgcatgtattcatcatgattcatgacacttggtttattgcatatgtaacacttggcta |
3203987 |
T |
 |
| Q |
365 |
gttgcatgcattattctt |
382 |
Q |
| |
|
| |||||| ||| ||||| |
|
|
| T |
3203988 |
gatgcatgtattcttctt |
3204005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 3203732 - 3204065
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctta |
118 |
Q |
| |
|
|||||| |||||||||||||| ||||||| |||||||||| | ||||| ||| || |||| |||||||||||||| || ||||||| ||||| |
|
|
| T |
3203732 |
tcttgagacttgacttgttgcctgtattcctcatgagtcatgacacttgtttt-----atgacatgggtaacatttggctttctgcatgtatttctcttg |
3203826 |
T |
 |
| Q |
119 |
acgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatttgact |
213 |
Q |
| |
|
|| |||||||||||| ||||||| ||| ||||||||||| || ||||||||||||||| ||||||| | | ||||| ||||| ||| |||||| |
|
|
| T |
3203827 |
acacttggcttgttggatgtattcctcatgagtcatgacgcttggtttattgcatgggtaacatttgacttgctacatgtatttctcttaacacttgact |
3203926 |
T |
 |
| Q |
214 |
tgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgt |
313 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||| ||||||| || | | ||||||| || |||| ||||||| ||| ||||||| |
|
|
| T |
3203927 |
tgttgcatgtattcatcatgattcatgacacttggtttattgcatatgtaacacttggctagatgcatgtattcttctttacacttgtcttattgcatgt |
3204026 |
T |
 |
| Q |
314 |
attcctcgtgagtcatgacacttgattcattgcatgagt |
352 |
Q |
| |
|
||||||| |||||||||||||||| || ||||||||||| |
|
|
| T |
3204027 |
attcctcatgagtcatgacacttggtttattgcatgagt |
3204065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 3203551 - 3203889
Alignment:
| Q |
19 |
tcttgacacttgacttgtt-gcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctt |
117 |
Q |
| |
|
|||||||||||| ||| || |||||||||| |||||||||||||||| ||| ||||| ||| |||||| ||| |||| || | |||||| || |
|
|
| T |
3203551 |
tcttgacacttgtcttttttgcatgtattcctcatgagtcacaatac-----ttgttttatcatatgggtaacacttgacttgctgcaggtattcaattt |
3203645 |
T |
 |
| Q |
118 |
aacgcttggcttgttgcatgtatttctcgtgagtcatgaca-----attattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgac |
212 |
Q |
| |
|
|| ||| ||||||| |||||||| || | |||| ||||| ||||||||||| ||||| ||||||| ||| | ||||||||||||| | ||||| |
|
|
| T |
3203646 |
cacactttgcttgttccatgtattccttataagtcgtgacacttggtttattgcatggataacagttgacttgttgcatgtattcctcttgagacttgac |
3203745 |
T |
 |
| Q |
213 |
ttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatg |
312 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||| || |||||||| || | | ||||||| |||||||||||||||| |||| || ||| |
|
|
| T |
3203746 |
ttgttgcctgtattcctcatgagtcatgacacttgttttatgacatgggtaacatttggctttctgcatgtatttctcttgacacttggcttgttggatg |
3203845 |
T |
 |
| Q |
313 |
tattcctcgtgagtcatgacacttgattcattgcatgagtaaca |
356 |
Q |
| |
|
|||||||| ||||||||||| |||| || |||||||| |||||| |
|
|
| T |
3203846 |
tattcctcatgagtcatgacgcttggtttattgcatgggtaaca |
3203889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 122 - 359
Target Start/End: Complemental strand, 31861031 - 31860789
Alignment:
| Q |
122 |
cttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgt |
216 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||| || ||| |||||| |||||||||||| ||||| ||||| | |||||||||| ||||| |
|
|
| T |
31861031 |
cttggcttgttgcatgtatttcttattagtcatgacactttgttcatttcatgggcaacacttgacttgttgtatgtatttcatttgacatttggcttgt |
31860932 |
T |
 |
| Q |
217 |
tgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtatt |
316 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||| || ||||| ||| ||| |||| || ||||||| |
|
|
| T |
31860931 |
tgcatgtattccttatgagtcatgacacttgatttattgcatgggtaacacttgacttgttgcatggattcctcttaacatttggcttgttgtatgtatt |
31860832 |
T |
 |
| Q |
317 |
cctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
| || ||| || || |||| |||||||||| ||||||||| |
|
|
| T |
31860831 |
cttcacgagcaataactcttggttcattgcatatgtaacactt |
31860789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 31861046 - 31860866
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctct |
291 |
Q |
| |
|
|||||| ||| |||| ||| ||||||||||||||| || || ||||||||||||| ||| ||| || ||| ||||| |||| ||||| |||| |||| | |
|
|
| T |
31861046 |
gtattcttctcgacacttggcttgttgcatgtatttcttattagtcatgacactttgttcatttcatgggcaacacttgacttgttgtatgtatttcatt |
31860947 |
T |
 |
| Q |
292 |
tgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatg |
372 |
Q |
| |
|
||||| ||| |||| ||||||||||||| ||||||||||||||||||| |||||||| ||||||||| || |||||||| |
|
|
| T |
31860946 |
tgacatttggcttgttgcatgtattccttatgagtcatgacacttgatttattgcatgggtaacacttgacttgttgcatg |
31860866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 174 - 359
Target Start/End: Complemental strand, 35153754 - 35153572
Alignment:
| Q |
174 |
acacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgaca |
273 |
Q |
| |
|
||||||||||| || | ||||| |||||||| |||||||||| || |||||| |||||||| |||||||| ||||||||| ||||||||| |||| |
|
|
| T |
35153754 |
acacttgacttgttacacgtattattcttgacacttgacttgttacacgtattc---atgagtcaagacacttgatttattgcacgggtaacacttgact |
35153658 |
T |
 |
| Q |
274 |
tgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
|| ||||| | ||||||||||||||||||| | ||||||||||||| ||| |||||||||||| || |||||||| |||| |||| |
|
|
| T |
35153657 |
tgctgcatatatttctcttgacacttgactggttgcatgtattccttatgaatcatgacacttggtttattgcatgggtaatactt |
35153572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 349
Target Start/End: Complemental strand, 35153681 - 35153494
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
|||||||| |||||||||||||||| || | |||| ||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||| | |
|
|
| T |
35153681 |
ttattgcacgggtaacacttgacttgctgcatatatttctcttgacacttgactggttgcatgtattccttatgaatcatgacacttggtttattgcatg |
35153582 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatg |
349 |
Q |
| |
|
||||| || || | | || |||| || ||||||||||||| ||| |||||||||| ||| |||||| |||||||| || |||||||| |
|
|
| T |
35153581 |
ggtaatacttggcttcctggatgtattcctcttgacacttggtttgttgcatgtattgctcatgagtc--gacacttggtttattgcatg |
35153494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 372
Target Start/End: Complemental strand, 31860975 - 31860686
Alignment:
| Q |
88 |
aacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgac |
182 |
Q |
| |
|
|||| ||| ||||||||||||||| | || || ||||||||||||||||||| || |||||||||||| || ||||||||||||||||||||| |
|
|
| T |
31860975 |
aacacttgacttgttgtatgtatttcatttgacatttggcttgttgcatgtattccttatgagtcatgacacttgatttattgcatgggtaacacttgac |
31860876 |
T |
 |
| Q |
183 |
ttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatg |
282 |
Q |
| |
|
|| ||| | | ||||||||| ||||||| ||||||| |||||||| ||| ||| || || ||||||| |||||| ||||||| || || | |||| |
|
|
| T |
31860875 |
ttgttgcatggattcctcttaacatttggcttgttgtatgtattcttcacgagcaataactcttggttcattgcatatgtaacacttgggttgctacatg |
31860776 |
T |
 |
| Q |
283 |
tgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatg |
372 |
Q |
| |
|
| | |||||||||||| |||| ||||| |||| ||| || || ||||||||| || |||||||||||||||||| || |||||||| |
|
|
| T |
31860775 |
tatccttcttgacacttggcttgttgcatatatttctcatgggttgtgacacttggtttattgcatgagtaacacttgacttgttgcatg |
31860686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 28950620 - 28950771
Alignment:
| Q |
163 |
ttgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggt |
262 |
Q |
| |
|
|||||||||||| |||| |||| ||| | |||| |||||||| ||| ||||||| ||||||||||| ||||||| ||||||||||||||||| ||| |
|
|
| T |
28950620 |
ttgcatgggtaaaacttaacttgttgcattcattcatcttgacacttggcttgttgtatgtattcctcgtgagtcacaacacttggtttattgcataggt |
28950719 |
T |
 |
| Q |
263 |
aacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgta |
314 |
Q |
| |
|
||||| ||| |||| |||||||| ||||||||||||| |||| ||| |||| |
|
|
| T |
28950720 |
aacacttgaattgttacatgtgttcctcttgacacttgtcttgttgcgtgta |
28950771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 35153391 - 35153218
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca-----attatt |
164 |
Q |
| |
|
||||||||||||||| |||||| || ||||| || ||||||| ||||| || |||| ||||||||| |||| || | |||||||||| ||||| |
|
|
| T |
35153391 |
ttggtttattgcatgtgtaacactttgcttgctgcatgtatttctctttacacttgacttgttgcaagtat---tcataagtcatgacatttggtttatt |
35153295 |
T |
 |
| Q |
165 |
gcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatga |
241 |
Q |
| |
|
||||| || |||||||| | ||||| ||||||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
35153294 |
gcatgagtgacacttgatctgttgtatgtattcctcttgacacttgtcttgttgcatgtattcttcatgagtcatga |
35153218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 331
Target Start/End: Complemental strand, 35153386 - 35153218
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
|||||||||| ||||||||| ||| || | ||||| ||||| ||| ||||||||||||| |||||| || |||||||||| ||||||||||||| | |
|
|
| T |
35153386 |
ttattgcatgtgtaacactttgcttgctgcatgtatttctctttacacttgacttgttgcaagtattc---ataagtcatgacatttggtttattgcatg |
35153290 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatga |
331 |
Q |
| |
|
|| |||| ||| ||||| |||| || ||||||||||||| |||| ||||||||||| || |||||||||| |
|
|
| T |
35153289 |
agtgacacttgatctgttgtatgtattcctcttgacacttgtcttgttgcatgtattcttcatgagtcatga |
35153218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 35153734 - 35153491
Alignment:
| Q |
14 |
attattcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcc |
113 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||| |||||| | ||||| ||| |||||| | |||||| ||| |||| || || |||| | |
|
|
| T |
35153734 |
attattcttgacacttgacttgttacacgtattcat---gagtcaagacacttgattt-----attgcacgggtaacacttgacttgctgcatatatttc |
35153643 |
T |
 |
| Q |
114 |
tcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatt |
208 |
Q |
| |
|
|||| || |||| || |||||||||||| || ||| |||||||| || ||||||||||||| ||||| ||| || | ||||||||||||||| | |
|
|
| T |
35153642 |
tcttgacacttgactggttgcatgtattccttatgaatcatgacacttggtttattgcatgggtaatacttggcttcctggatgtattcctcttgacact |
35153543 |
T |
 |
| Q |
209 |
tgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggt |
262 |
Q |
| |
|
|| |||||||||||||| |||||||||| |||||||||||||||||| |||| |
|
|
| T |
35153542 |
tggtttgttgcatgtattgctcatgagtc--gacacttggtttattgcatgggt |
35153491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 359
Target Start/End: Complemental strand, 35153428 - 35153280
Alignment:
| Q |
208 |
ttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgct |
307 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||||||||| | ||||||| | | || ||||||| |||||||| |||||||||||| | |
|
|
| T |
35153428 |
ttgacttgctgcatgtattcctcttgacatttgacacttggtttattgcatgtgtaacactttgcttgctgcatgtatttctctttacacttgacttgtt |
35153329 |
T |
 |
| Q |
308 |
gcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
||| |||||| | |||||||||| ||| || ||||||||||| |||||| |
|
|
| T |
35153328 |
gcaagtattcata---agtcatgacatttggtttattgcatgagtgacactt |
35153280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 35153305 - 35153218
Alignment:
| Q |
69 |
tttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatga |
156 |
Q |
| |
|
||||||||||||||||||| ||| ||| ||||||||||||||||||| || |||| ||||||||||||||| || |||||||||| |
|
|
| T |
35153305 |
tttggtttattgcatgagtgacacttgatctgttgtatgtattcctcttgacacttgtcttgttgcatgtattcttcatgagtcatga |
35153218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 300
Target Start/End: Original strand, 26979368 - 26979501
Alignment:
| Q |
167 |
atgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaaca |
266 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| |||||||| |||||||||||||||||||| | ||||||| ||| | ||||||| |||| || ||||| |
|
|
| T |
26979368 |
atgggtaatacttggtttactgtaagtatttctcttgacgcttgacttgttgcatgtattctttatgagtcctgatatttggtttgctgcatggataaca |
26979467 |
T |
 |
| Q |
267 |
cctgacatgttgcatgtgtttctcttgacacttg |
300 |
Q |
| |
|
| | || ||||||||| || |||||||||||| |
|
|
| T |
26979468 |
cttaacttgttgcatgcattagtcttgacacttg |
26979501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 31860769 - 31860656
Alignment:
| Q |
199 |
tcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacact |
298 |
Q |
| |
|
|||||||| ||| |||||||||| |||| |||||| || ||||||||||||||||||| | ||||||| |||| |||||||||| || ||| ||| | | |
|
|
| T |
31860769 |
tcttgacacttggcttgttgcatatatttctcatgggttgtgacacttggtttattgcatgagtaacacttgacttgttgcatgtattcctcctgatatt |
31860670 |
T |
 |
| Q |
299 |
tgacttgctgcatg |
312 |
Q |
| |
|
|| |||| |||||| |
|
|
| T |
31860669 |
tggcttgttgcatg |
31860656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 403
Target Start/End: Original strand, 26979396 - 26979514
Alignment:
| Q |
285 |
tttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcattattcttag |
384 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| | |||||| ||| | ||| || |||||| ||||||||| || ||||||||||||| |||| |
|
|
| T |
26979396 |
tttctcttgacgcttgacttgttgcatgtattctttatgagtcctgatatttggtttgctgcatggataacacttaacttgttgcatgcattagtcttga |
26979495 |
T |
 |
| Q |
385 |
cacttgagatgcattttag |
403 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
26979496 |
cacttgggatgcattttag |
26979514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 222
Target Start/End: Complemental strand, 31860813 - 31860656
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----att |
164 |
Q |
| |
|
|||||| ||||||| |||||| |||| ||| | |||||| | |||| || ||||||||||||||| |||||||| || || ||||| || ||| |
|
|
| T |
31860813 |
ttggttcattgcatatgtaacacttgggttgctacatgtatccttcttgacacttggcttgttgcatatatttctcatgggttgtgacacttggtttatt |
31860714 |
T |
 |
| Q |
165 |
gcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatg |
222 |
Q |
| |
|
||||| |||||||||||||| ||| | ||||||||| ||| ||||| ||||||||||| |
|
|
| T |
31860713 |
gcatgagtaacacttgacttgttgcatgtattcctcctgatatttggcttgttgcatg |
31860656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 359
Target Start/End: Original strand, 28950606 - 28950726
Alignment:
| Q |
239 |
tgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttga |
338 |
Q |
| |
|
||||||||| ||| ||||| |||||| || | || |||||||| || |||||||||||| |||| || ||||||||||||||||||| ||||||| |
|
|
| T |
28950606 |
tgacacttgatttgttgcatgggtaaaacttaacttgttgcattcattcatcttgacacttggcttgttgtatgtattcctcgtgagtcacaacacttgg |
28950705 |
T |
 |
| Q |
339 |
ttcattgcatgagtaacactt |
359 |
Q |
| |
|
|| ||||||| ||||||||| |
|
|
| T |
28950706 |
tttattgcataggtaacactt |
28950726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 31860947 - 31860832
Alignment:
| Q |
21 |
ttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaac |
120 |
Q |
| |
|
|||||| ||| |||||||||||||||| | |||||||| | ||||| ||| |||||||| |||||| ||| ||||||| ||| |||||||||||| |
|
|
| T |
31860947 |
ttgacatttggcttgttgcatgtattccttatgagtcatgacacttgattt-----attgcatgggtaacacttgacttgttgcatggattcctcttaac |
31860853 |
T |
 |
| Q |
121 |
gcttggcttgttgcatgtatt |
141 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
31860852 |
atttggcttgttgtatgtatt |
31860832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 35153432 - 35153354
Alignment:
| Q |
294 |
acacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatg |
372 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||| || |||||||| ||||||||| ||| | |||||| |
|
|
| T |
35153432 |
acacttgacttgctgcatgtattcctcttgacatttgacacttggtttattgcatgtgtaacactttgcttgctgcatg |
35153354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 28950656 - 28950771
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctta |
118 |
Q |
| |
|
|||||||||||| ||||||| |||||||| || |||||||||| || |||||||||||||| |||||| ||| ||||| |||| |||||||| |
|
|
| T |
28950656 |
tcttgacacttggcttgttgtatgtattcctcgtgagtcacaacac-----ttggtttattgcataggtaacacttgaattgttacatgtgttcctcttg |
28950750 |
T |
 |
| Q |
119 |
acgcttggcttgttgcatgta |
139 |
Q |
| |
|
|| |||| |||||||| |||| |
|
|
| T |
28950751 |
acacttgtcttgttgcgtgta |
28950771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 35147809 - 35147749
Alignment:
| Q |
222 |
gtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatg |
282 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| | ||||||||| | || ||||||||| |
|
|
| T |
35147809 |
gtattcctaatgaatcatgacacttggtttattgtatgggtaacacttaacttgttgcatg |
35147749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 35153260 - 35153181
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggctt |
99 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||||| ||| | | ||||||||||||||||| ||| ||||||| |
|
|
| T |
35153260 |
tcttgacacttgtcttgttgcatgtattcttcatgagtcatgatatatac-atggtttattgcatgagtgacacttggctt |
35153181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 35147781 - 35147687
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
|||||| ||||||||||||| |||| ||| | | |||||||||| ||| || || |||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
35147781 |
ttattgtatgggtaacacttaacttgttgcatgcattcctcttggcatctggattattgcatatattc---atgagtcatgatacttggtttattgca |
35147687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 31860663 - 31860609
Alignment:
| Q |
365 |
gttgcatgcattattcttagcacttgagatgcattttaggcgcccaaaggtacaa |
419 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||| |
|
|
| T |
31860663 |
gttgcatgcattactcttaacactttgaatgcattttaggcgcccaatggtacaa |
31860609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 35153439 - 35153394
Alignment:
| Q |
167 |
atgggtaacacttgacttattgtaagtattcctcttgacatttgac |
212 |
Q |
| |
|
|||||||||||||||||| || | ||||||||||||||||||||| |
|
|
| T |
35153439 |
atgggtaacacttgacttgctgcatgtattcctcttgacatttgac |
35153394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 35147809 - 35147745
Alignment:
| Q |
312 |
gtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcatt |
376 |
Q |
| |
|
|||||||| ||| |||||||||||| || |||| ||| |||||||||| || |||||||||||| |
|
|
| T |
35147809 |
gtattcctaatgaatcatgacacttggtttattgtatgggtaacacttaacttgttgcatgcatt |
35147745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 35147915 - 35147871
Alignment:
| Q |
294 |
acacttgacttgctgcatgtattcctcgtgagtcatgacacttga |
338 |
Q |
| |
|
||||||| ||||| ||||||||| ||| ||||||||||||||||| |
|
|
| T |
35147915 |
acacttggcttgcggcatgtattactcatgagtcatgacacttga |
35147871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 69 - 372
Target Start/End: Original strand, 12513032 - 12513334
Alignment:
| Q |
69 |
tttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----at |
163 |
Q |
| |
|
|||| ||||||||||| |||| |||| ||| || ||||||||||||| || ||||| |||||||||||||| | |||||||||||| || || |
|
|
| T |
12513032 |
tttgatttattgcatgggtaatgattggtttgctgcatgtattcctcttgacacttggattgttgcatgtatt---catgagtcatgacacttggtttat |
12513128 |
T |
 |
| Q |
164 |
tgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggta |
263 |
Q |
| |
|
||||||||||||||| ||||| ||| | ||||||||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| | ||| |
|
|
| T |
12513129 |
tgcatgggtaacactcgacttgttgcatgtattcctcttgacacttgaattgttgcatgtattcttcataagtcatgacacttggtttattgcatgtgta |
12513228 |
T |
 |
| Q |
264 |
acacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagct |
363 |
Q |
| |
|
|||| |||||| || |||| || || ||||||||| ||||| |||||||| || |||||||||||||||| || |||||||| ||||||||| ||| |
|
|
| T |
12513229 |
acacttgacatcgtgaatgtattcctattgacacttaacttgtggcatgtat---tcatgagtcatgacacttggtttattgcatgggtaacacttggct |
12513325 |
T |
 |
| Q |
364 |
agttgcatg |
372 |
Q |
| |
|
|||||||| |
|
|
| T |
12513326 |
tgttgcatg |
12513334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 70 - 377
Target Start/End: Original strand, 12513120 - 12513430
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----att |
164 |
Q |
| |
|
||||||||||||||| |||||| | | ||||||| ||||||||||||| || |||| |||||||||||||| || | |||||||||| || ||| |
|
|
| T |
12513120 |
ttggtttattgcatgggtaacactcgacttgttgcatgtattcctcttgacacttgaattgttgcatgtattcttcataagtcatgacacttggtttatt |
12513219 |
T |
 |
| Q |
165 |
gcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaa |
264 |
Q |
| |
|
||||| |||||||||||| | || | |||||||| |||||| || |||||| |||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
12513220 |
gcatgtgtaacacttgacatcgtgaatgtattcctattgacacttaacttgtggcatgtattc---atgagtcatgacacttggtttattgcatgggtaa |
12513316 |
T |
 |
| Q |
265 |
cacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcat-gagtaacacttagct |
363 |
Q |
| |
|
||| || | |||||||||||| ||| || |||||| |||| ||||||||||||| |||||| ||||| ||| || ||||||| | ||||||||||||| |
|
|
| T |
12513317 |
cacttggcttgttgcatgtgtccctcctgtcacttgtcttgttgcatgtattccttatgagtcgtgacaattggtttattgcatggggtaacacttagct |
12513416 |
T |
 |
| Q |
364 |
agttgcatgcatta |
377 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
12513417 |
tgttgcacgcatta |
12513430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 109 - 359
Target Start/End: Complemental strand, 18960810 - 18960556
Alignment:
| Q |
109 |
attcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttg |
203 |
Q |
| |
|
|||||||||||| |||||||||||| ||| || ||| ||| ||||||||||| ||||||||| ||||||||||||| || | |||||||||||| |
|
|
| T |
18960810 |
attcctcttaacacttggcttgttgtatggtttcctcatgaatcatgacaattgatttattgcatggc-aacacttgacttaatgcatgtattcctcttg |
18960712 |
T |
 |
| Q |
204 |
acatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgact |
303 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||| ||||| || |||||||||| |||| |||| || | |||||||||| ||||||||| ||| || | |
|
|
| T |
18960711 |
acacttggcttgttgcatgtattcctcatgagtcgtgacatttagtttattgcatgggttacacttggcttgttgcatgtatttctcttggcacctgggt |
18960612 |
T |
 |
| Q |
304 |
tgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
| |||||||||| ||| ||||| ||||||||| || |||||||| || |||||| |
|
|
| T |
18960611 |
tattgcatgtatttctcatgagttgtgacacttggtttattgcatgggtgacactt |
18960556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 192 - 337
Target Start/End: Original strand, 10927937 - 10928082
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctct |
291 |
Q |
| |
|
|||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||| || | || |||||| || |||| |
|
|
| T |
10927937 |
gtattcttcttgacacttgatttgttgcatatattcctcatgagtcatgacacttgatctattgcatgggtaacacttggcttggtgcatgcattcctct |
10928036 |
T |
 |
| Q |
292 |
tgacacttgacttgctgcatgtattcctcgtgagtcatgacacttg |
337 |
Q |
| |
|
||||||||| ||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
10928037 |
tgacacttggcttattgcatgtatttctcctgagtcatgacacttg |
10928082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 105 - 316
Target Start/End: Complemental strand, 18960725 - 18960510
Alignment:
| Q |
105 |
atgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca-----attattgcatgggtaacacttgacttattgtaagtattcct |
199 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||| ||| |||||| ||||| ||||||||||||| ||||||| ||| ||| | ||||| || |
|
|
| T |
18960725 |
atgtattcctcttgacacttggcttgttgcatgtattcctcatgagtcgtgacatttagtttattgcatgggttacacttggcttgttgcatgtatttct |
18960626 |
T |
 |
| Q |
200 |
cttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacactt |
299 |
Q |
| |
|
|||| || || || ||||||||||| ||||||||| ||||||||||||||||||| |||| |||| |||| | | |||||| || |||||||||||| |
|
|
| T |
18960625 |
cttggcacctgggttattgcatgtatttctcatgagttgtgacacttggtttattgcatgggtgacacttgac-tttcgcatgtattcctcttgacactt |
18960527 |
T |
 |
| Q |
300 |
gacttgctgcatgtatt |
316 |
Q |
| |
|
|||||| || ||||||| |
|
|
| T |
18960526 |
gacttgttgtatgtatt |
18960510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 10927906 - 10928092
Alignment:
| Q |
75 |
ttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatg |
169 |
Q |
| |
|
|||||||||| |||||| |||| | | || |||||||| |||| || |||| ||||||||| |||| ||| |||||||||||| || |||||||| |
|
|
| T |
10927906 |
ttattgcatgggtaacacttgg-tcgatgcatgtattcttcttgacacttgatttgttgcatatattcctcatgagtcatgacacttgatctattgcatg |
10928004 |
T |
 |
| Q |
170 |
ggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
||||||||||| ||| || | | ||||||||||||| ||| ||| ||||||||||| ||| |||||||||||||||||||| ||||| |
|
|
| T |
10928005 |
ggtaacacttggcttggtgcatgcattcctcttgacacttggcttattgcatgtatttctcctgagtcatgacacttggtttgttgca |
10928092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 18960716 - 18960485
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctta |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| | | ||| |||||||||||| || ||| ||||||||||| ||||||| ||||| |
|
|
| T |
18960716 |
tcttgacacttggcttgttgcatgtattcctcatgagtcgtgaca-----tttagtttattgcatgggttacacttggcttgttgcatgtatttctcttg |
18960622 |
T |
 |
| Q |
119 |
acgcttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatttgact |
213 |
Q |
| |
|
| | ||| || ||||||||||||||| ||||| ||||| || ||||||||||| ||||||||||| | | | ||||||||||||||| |||||| |
|
|
| T |
18960621 |
gcacctgggttattgcatgtatttctcatgagttgtgacacttggtttattgcatgggtgacacttgactt-tcgcatgtattcctcttgacacttgact |
18960523 |
T |
 |
| Q |
214 |
tgttgcatgtattcctcatgagtcatgacacttggtttatt |
254 |
Q |
| |
|
||||| ||||||| || |||||||||||||| |||||| |
|
|
| T |
18960522 |
tgttgtatgtatta---attagtcatgacacttgatttatt |
18960485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 18960810 - 18960633
Alignment:
| Q |
194 |
attcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttg |
293 |
Q |
| |
|
||||||||| ||| ||| ||||||| ||| |||||||||| |||||||| ||| ||||||||| || ||||| |||| | ||||||| || |||||| |
|
|
| T |
18960810 |
attcctcttaacacttggcttgttgtatggtttcctcatgaatcatgacaattgatttattgcatggc-aacacttgacttaatgcatgtattcctcttg |
18960712 |
T |
 |
| Q |
294 |
acacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatg |
372 |
Q |
| |
|
||||||| |||| |||||||||||||| |||||| ||||| || || |||||||| || |||||| ||| |||||||| |
|
|
| T |
18960711 |
acacttggcttgttgcatgtattcctcatgagtcgtgacatttagtttattgcatgggttacacttggcttgttgcatg |
18960633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 10927943 - 10928078
Alignment:
| Q |
18 |
ttcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctt |
117 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| |||||||||| | || ||| | ||||||||| |||||| |||||||| || ||| ||||||||| |
|
|
| T |
10927943 |
ttcttgacacttgatttgttgcatatattcctcatgagtcatgacac-----ttgatctattgcatgggtaacacttggcttggtgcatgcattcctctt |
10928037 |
T |
 |
| Q |
118 |
aacgcttggcttgttgcatgtatttctcgtgagtcatgaca |
158 |
Q |
| |
|
|| |||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
10928038 |
gacacttggcttattgcatgtatttctcctgagtcatgaca |
10928078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 376
Target Start/End: Original strand, 10927944 - 10928031
Alignment:
| Q |
289 |
tcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcatt |
376 |
Q |
| |
|
||||||||||||| ||| ||||| |||||||| |||||||||||||||||| |||||||| ||||||||| ||| | |||||||||| |
|
|
| T |
10927944 |
tcttgacacttgatttgttgcatatattcctcatgagtcatgacacttgatctattgcatgggtaacacttggcttggtgcatgcatt |
10928031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 160 - 402
Target Start/End: Original strand, 9321548 - 9321788
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
||||||||||||||||||||| || ||| | |||||| ||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9321548 |
ttattgcatgggtaacacttgg-ttgttgcatgtattcttcttggcttttggcttgttgtatgtattcctcatgagtcatgacacttggtttattgcatg |
9321646 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
|||||||| || |||| ||||| || ||||||| | ||| |||| | ||| |||||||| ||| | |||||||||| ||||||||||| |||||||| |
|
|
| T |
9321647 |
ggtaacacttggtttgttacatgtattcctcttgata-ttggcttgttccatatattcctcatgaattatgacacttggttcattgcatgtgtaacacta |
9321745 |
T |
 |
| Q |
360 |
agctagttgcatgcattattcttagcacttgagatgcatttta |
402 |
Q |
| |
|
|||| ||||||||||||| || | |||||| ||||||||||| |
|
|
| T |
9321746 |
agcttgttgcatgcattactcatgacacttgggatgcatttta |
9321788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 9321548 - 9321743
Alignment:
| Q |
75 |
ttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca-----attattgcatg |
169 |
Q |
| |
|
|||||||||| |||||| |||| |||||| |||||||| |||| | ||||||||||| ||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
9321548 |
ttattgcatgggtaacacttgg-ttgttgcatgtattcttcttggcttttggcttgttgtatgtattcctcatgagtcatgacacttggtttattgcatg |
9321646 |
T |
 |
| Q |
170 |
ggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacac |
267 |
Q |
| |
|
||||||||||| || || | ||||||||||||| | ||| |||||| ||| |||||||||||| | ||||||||||||| |||||| | ||||||| |
|
|
| T |
9321647 |
ggtaacacttggtttgttacatgtattcctcttgata-ttggcttgttccatatattcctcatgaattatgacacttggttcattgcatgtgtaacac |
9321743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 343
Target Start/End: Original strand, 11879862 - 11880046
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
||||||||||||||||||||||||| ||| | | | || |||||| | ||| ||||||||||||||||||||||| |||||||| |||||||||| | | |
|
|
| T |
11879862 |
ttattgcatgggtaacacttgacttgttgcatgcaatcatcttgatacttggcttgttgcatgtattcctcatgaatcatgacatttggtttatttcctg |
11879961 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttg-ctgcatgtattcctcgtgagtcatgacacttgattcat |
343 |
Q |
| |
|
|||||||| || | || ||||||| || |||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||| |
|
|
| T |
11879962 |
ggtaacacttggcttgatgcatgtattcctcttgacacttgacttgtttgtatgtattcctcatgagtcatgtcacttggttcat |
11880046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 122 - 433
Target Start/End: Complemental strand, 35687393 - 35687085
Alignment:
| Q |
122 |
cttggcttgttgcatgtatttctcgtgagtcatgacaatt-----attgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgt |
216 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||||| ||| || | ||||||||||||| |||||| || | |
|
|
| T |
35687393 |
cttggcttgttgcatgtatttctcatgagtcatgacacttgatttattgcatgggtgacacttggcttgctgcatgtattcctcttgaaatttgaattat |
35687294 |
T |
 |
| Q |
217 |
tgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtatt |
316 |
Q |
| |
|
|||||| ||| || || |||||||||||||||||||||||| || |||| | || ||||||| || || |||| || || | || |||||||||| |
|
|
| T |
35687293 |
tgcatgcatttcttataagtcatgacacttggtttattgcattggaaacattaggtttgctgcatgtattccttttgaaacatggcctgttgcatgtatt |
35687194 |
T |
 |
| Q |
317 |
cctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcattattcttagcacttgagatgcattttaggcgcccaaaggta |
416 |
Q |
| |
|
|||| ||||| ||||||||| || ||||||| || || |||| |||||||| |||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
35687193 |
cctcatgagttatgacacttagtttattgcat---------ttgtcttgttggatgcattactcttgacacttgagatgcattttaggcacccaagggta |
35687103 |
T |
 |
| Q |
417 |
c-aatgacagggtctttt |
433 |
Q |
| |
|
| ||||||| |||||||| |
|
|
| T |
35687102 |
caaatgacaaggtctttt |
35687085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 359
Target Start/End: Complemental strand, 35711753 - 35711556
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
||||||||||||||||||| | || ||| ||||||| |||||||| ||| |||||||||||||||| ||||||||||| || || |||||| || | |
|
|
| T |
35711753 |
ttattgcatgggtaacactagg-ttgttgcaagtattgatcttgacacttggtttgttgcatgtattcc-catgagtcatggcattttatttattacatg |
35711656 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
| |||| ||| | || ||||||| || || |||||||||||| || |||||||||||||| || ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
35711655 |
cgcaacatctggcttgctgcatgtattccttttgacacttgacatgttgcatgtattcctcacgaatcatgacacttgatttattgcatgggtaacactt |
35711556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 250
Target Start/End: Original strand, 11879862 - 11880043
Alignment:
| Q |
75 |
ttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca-----attattgcatg |
169 |
Q |
| |
|
|||||||||| |||||| ||| ||||||| ||| | || |||| | |||||||||||||||||||| ||| ||| |||||||| ||||| | || |
|
|
| T |
11879862 |
ttattgcatgggtaacacttgacttgttgcatgcaatcatcttgatacttggcttgttgcatgtattcctcatgaatcatgacatttggtttatttcctg |
11879961 |
T |
 |
| Q |
170 |
ggtaacacttgacttattgtaagtattcctcttgacatttgacttg-ttgcatgtattcctcatgagtcatgacacttggtt |
250 |
Q |
| |
|
||||||||||| ||| || | ||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
11879962 |
ggtaacacttggcttgatgcatgtattcctcttgacacttgacttgtttgtatgtattcctcatgagtcatgtcacttggtt |
11880043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 160 - 299
Target Start/End: Complemental strand, 38179759 - 38179620
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
|||||| ||| |||||||||| ||| || | ||||||||||||||| || | ||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
38179759 |
ttattgaatgagtaacacttggcttcctgcatatattcctcttgacatctggcatgttgcatgtatttctcatgagtcatgacacttggtttattgcatg |
38179660 |
T |
 |
| Q |
260 |
ggtaacacctgacatgttgcatgtgtttctcttgacactt |
299 |
Q |
| |
|
|||||| | || ||||||||| || |||||||||||| |
|
|
| T |
38179659 |
tataacacttaacttgttgcatgcattactcttgacactt |
38179620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 232 - 377
Target Start/End: Original strand, 18483089 - 18483234
Alignment:
| Q |
232 |
tgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatga |
331 |
Q |
| |
|
|||| ||||| ||||| |||||||| || |||||| || | || ||||||| ||| |||||||||||| ||| |||||||||||||| | |||||||| |
|
|
| T |
18483089 |
tgagccatgatacttgagttattgcatggataacacttgtcttgctgcatgtatttatcttgacacttggtttgttgcatgtattcctcataagtcatga |
18483188 |
T |
 |
| Q |
332 |
cacttgattcattgcatgagtaacacttagctagttgcatgcatta |
377 |
Q |
| |
|
||||||||| ||||||| |||||||||||| ||| ||||||||| |
|
|
| T |
18483189 |
cacttgattttttgcatgggtaacacttagcatgtttcatgcatta |
18483234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 372
Target Start/End: Original strand, 11879806 - 11879984
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctct |
291 |
Q |
| |
|
||||||||||||||| ||| || ||||||||||||||||| | | ||||||||||||| |||||| ||||||||| |||| ||||||||| | ||| |
|
|
| T |
11879806 |
gtattcctcttgacacttggattcttgcatgtattcctcattaat-atgacacttggtt-attgcatgggtaacacttgacttgttgcatgcaatcatct |
11879903 |
T |
 |
| Q |
292 |
tgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatg |
372 |
Q |
| |
|
||| ||||| |||| |||||||||||||| ||| |||||||| ||| || ||| | || ||||||||| ||| | |||||| |
|
|
| T |
11879904 |
tgatacttggcttgttgcatgtattcctcatgaatcatgacatttggtttatttcctgggtaacacttggcttgatgcatg |
11879984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 35687502 - 35687318
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgttt---- |
287 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||||||||| ||||||||| |||||| ||| ||||| ||||| | | || | || ||||||| || |
|
|
| T |
35687502 |
gtattcttcttgacacttgtcttgttgcatgtattccttatgagtcattacactttattttttgcatgggtagcgcttggcttgctgcatgtaattaatg |
35687403 |
T |
 |
| Q |
288 |
ctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatg |
372 |
Q |
| |
|
|||||| ||||| |||| |||||||||| ||| ||||||||||||||||||| |||||||| || |||||| ||| | |||||| |
|
|
| T |
35687402 |
ctcttggtacttggcttgttgcatgtatttctcatgagtcatgacacttgatttattgcatgggtgacacttggcttgctgcatg |
35687318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 18483107 - 18483214
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcagg |
259 |
Q |
| |
|
||||||||||| ||||||||| ||| || | ||||| |||||||| ||| |||||||||||||||||||| |||||||||||||| ||| ||||| | |
|
|
| T |
18483107 |
ttattgcatggataacacttgtcttgctgcatgtatttatcttgacacttggtttgttgcatgtattcctcataagtcatgacacttgattttttgcatg |
18483206 |
T |
 |
| Q |
260 |
ggtaacac |
267 |
Q |
| |
|
|||||||| |
|
|
| T |
18483207 |
ggtaacac |
18483214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 35711520 - 35711444
Alignment:
| Q |
70 |
ttggtttattgcatgagtaaca-tttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctc |
145 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||| ||| ||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
35711520 |
ttggtttattgcatgagtgacactttggcttgttgcatgcattcctcttgacacttggcttattgcatgtatttctc |
35711444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 35711860 - 35711817
Alignment:
| Q |
74 |
tttattgcatgagtaacatttggcttgttgtatgtattcctctt |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
35711860 |
tttattgcatgaataacatttggcttgttgtatgtattcctctt |
35711817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 38179702 - 38179627
Alignment:
| Q |
307 |
tgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcattattctt |
382 |
Q |
| |
|
|||||||||| ||| |||||||||||||||| || |||||||| ||||||||| || ||||||||||||| |||| |
|
|
| T |
38179702 |
tgcatgtatttctcatgagtcatgacacttggtttattgcatgtataacacttaacttgttgcatgcattactctt |
38179627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 18483898 - 18483973
Alignment:
| Q |
192 |
gtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacac |
267 |
Q |
| |
|
|||||| | |||||||||| |||||||| ||||| | ||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
18483898 |
gtattcatattgacatttggtttgttgcacgtatttattatgagtcatgacacttggtttattgaatgggtaacac |
18483973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 377
Target Start/End: Original strand, 18483938 - 18483993
Alignment:
| Q |
322 |
tgagtcatgacacttgattcattgcatgagtaacacttagctagttgcatgcatta |
377 |
Q |
| |
|
|||||||||||||||| || |||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
18483938 |
tgagtcatgacacttggtttattgaatgggtaacacttagcttgttgcatgcatta |
18483993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 38179759 - 38179676
Alignment:
| Q |
75 |
ttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca |
158 |
Q |
| |
|
|||||| |||||||||| ||||||| || || |||||||||| || |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
38179759 |
ttattgaatgagtaacacttggcttcctgcatatattcctcttgacatctggcatgttgcatgtatttctcatgagtcatgaca |
38179676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 11879901 - 11880033
Alignment:
| Q |
19 |
tcttgacacttgacttgttgcatgtattcatcatgagtcacaatacttgctttggtttattgcatgagtaacatttggcttgttgtatgtattcctctta |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||||| |||||| ||| | | ||||||||||| | || |||||| |||||||| || ||||||||||||| |
|
|
| T |
11879901 |
tcttgatacttggcttgttgcatgtattcctcatgaatcatgaca-----tttggtttatttcctgggtaacacttggcttgatgcatgtattcctcttg |
11879995 |
T |
 |
| Q |
119 |
acgcttggcttg-ttgcatgtatttctcgtgagtcatg |
155 |
Q |
| |
|
|| |||| |||| ||| ||||||| ||| ||||||||| |
|
|
| T |
11879996 |
acacttgacttgtttgtatgtattcctcatgagtcatg |
11880033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 11880132 - 11880047
Alignment:
| Q |
235 |
gtcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctc |
320 |
Q |
| |
|
||||||||||||||||||||||| |||| |||| || | ||||||||| || |||| ||||||| ||| |||||||||||||| |
|
|
| T |
11880132 |
gtcatgacacttggtttattgcatgggttacacttgtcttgttgcatgcattcatctttacacttggtttgttgcatgtattcctc |
11880047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 11880122 - 11880051
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatt |
141 |
Q |
| |
|
||||||||||||||| || ||| ||| ||||||| ||| |||| |||| || ||||| |||||||||||||| |
|
|
| T |
11880122 |
ttggtttattgcatgggttacacttgtcttgttgcatgcattcatctttacacttggtttgttgcatgtatt |
11880051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 11880117 - 11880043
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatga |
234 |
Q |
| |
|
||||||||||||| ||||||| ||| ||| | | |||| |||| ||| ||| |||||||||||||||||||||| |
|
|
| T |
11880117 |
ttattgcatgggttacacttgtcttgttgcatgcattcatctttacacttggtttgttgcatgtattcctcatga |
11880043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 35687496 - 35687456
Alignment:
| Q |
18 |
ttcttgacacttgacttgttgcatgtattcatcatgagtca |
58 |
Q |
| |
|
||||||||||||| |||||||||||||||| | |||||||| |
|
|
| T |
35687496 |
ttcttgacacttgtcttgttgcatgtattccttatgagtca |
35687456 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 140464 - 140367
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
||||||||||||||||||| ||||| |||| |||||||||||||||||||| | ||| ||||||| |||||||| |||| ||||||||| |||||| |
|
|
| T |
140464 |
ttattgcatgggtaacactcgacttggtgtatatattcctcttgacatttgacctattgtatgtatttctcatgagccatgtcacttggttcattgca |
140367 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 403
Target Start/End: Complemental strand, 140467 - 140311
Alignment:
| Q |
247 |
ggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgc |
346 |
Q |
| |
|
||||||||||| ||||||||| ||| || || || | || ||||||||| ||||| | || ||||||| ||| |||| |||| |||||| |||||||| |
|
|
| T |
140467 |
ggtttattgcatgggtaacactcgacttggtgtatatattcctcttgacatttgacctattgtatgtatttctcatgagccatgtcacttggttcattgc |
140368 |
T |
 |
| Q |
347 |
atgagtaacacttagctagttgcatgcattattcttagcacttgagatgcattttag |
403 |
Q |
| |
|
|| | |||||||| | ||||||||||||| ||||| |||||| |||||||||||| |
|
|
| T |
140367 |
attaataacacttgaattgttgcatgcattactcttaacacttgggatgcattttag |
140311 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 20807047 - 20806966
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatga |
241 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20807047 |
ttattgcatgggtaacatttgccttgttgcatatattcctcttgacatttggtttgttgcatgtattcctcatgagtcatga |
20806966 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 382
Target Start/End: Complemental strand, 20807061 - 20806916
Alignment:
| Q |
236 |
tcatgacacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacact |
335 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || | |||||||| | || ||||||||| ||| ||| |||||||||||||| |||||||||| || |
|
|
| T |
20807061 |
tcatgacacttggtttattgcatgggtaacatttgccttgttgcatatattcctcttgacatttggtttgttgcatgtattcctcatgagtcatgatac- |
20806963 |
T |
 |
| Q |
336 |
tgattcattgcatgagtaacacttagctagttgcatgcattattctt |
382 |
Q |
| |
|
||| | |||||||| ||| |||||| | |||||| |||||| |||| |
|
|
| T |
20806962 |
tgagttattgcatggataatacttagtttgttgcacgcattactctt |
20806916 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 20807052 - 20806966
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatga |
156 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| || |||||||||| || |||| |||||||||||||| ||| |||||||||| |
|
|
| T |
20807052 |
ttggtttattgcatgggtaacatttgccttgttgcatatattcctcttgacatttggtttgttgcatgtattcctcatgagtcatga |
20806966 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 359
Target Start/End: Original strand, 3547013 - 3547107
Alignment:
| Q |
262 |
taacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgattcattgcatgagtaacactt |
359 |
Q |
| |
|
|||||| |||| || ||||||| || |||||||||||| |||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
3547013 |
taacacttgacttgctgcatgtattcatcttgacacttggcttgttgcatgtattc---gtgagtcatgacacttgatttattgcatgggtaacactt |
3547107 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 3547008 - 3547105
Alignment:
| Q |
167 |
atgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaaca |
266 |
Q |
| |
|
|||| ||||||||||||| || | |||||| |||||||| ||| |||||||||||||| || |||||||||||||||| ||||||||| |||||||| |
|
|
| T |
3547008 |
atggataacacttgacttgctgcatgtattcatcttgacacttggcttgttgcatgtat---tcgtgagtcatgacacttgatttattgcatgggtaaca |
3547104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 363
Target Start/End: Complemental strand, 9846258 - 9846136
Alignment:
| Q |
241 |
acacttggtttattgcaggggtaacacctgacatgttgcatgtgtttctcttgacacttgacttgctgcatgtattcctcgtgagtcatgacacttgatt |
340 |
Q |
| |
|
||||||||||| ||| | ||||||||| | | |||| |||| || | |||||||| || |||| || |||||||||||||||||||||||||||| || |
|
|
| T |
9846258 |
acacttggtttgttgtatgggtaacacttagcttgtttcatgcattccacttgacacatggcttgttgtatgtattcctcgtgagtcatgacacttggtt |
9846159 |
T |
 |
| Q |
341 |
cattgcatgagtaacacttagct |
363 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
9846158 |
tattgcataggtaacacttagct |
9846136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 9846215 - 9846142
Alignment:
| Q |
194 |
attcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacac |
267 |
Q |
| |
|
||||| ||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
9846215 |
attccacttgacacatggcttgttgtatgtattcctcgtgagtcatgacacttggtttattgcataggtaacac |
9846142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 3538561 - 3538606
Alignment:
| Q |
208 |
ttgacttgttgcatgtattcctcatgagtcatgacacttggtttat |
253 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
3538561 |
ttgacttgttgcatacattcctcttgagtcatgacacttggtttat |
3538606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 9846094 - 9846021
Alignment:
| Q |
194 |
attcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgcaggggtaacac |
267 |
Q |
| |
|
|||| |||||||| |||| || ||| | ||||||| ||||||||| |||||||||||||||| | ||||||||| |
|
|
| T |
9846094 |
attcgtcttgacacttgatttattgtacgtattccacatgagtcaagacacttggtttattgtatgggtaacac |
9846021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 9846254 - 9846166
Alignment:
| Q |
70 |
ttggtttattgcatgagtaacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgaca |
158 |
Q |
| |
|
||||||| ||| ||| |||||| || ||||||| ||| ||||| ||| || | |||||||||| ||||||| |||||||||||||||| |
|
|
| T |
9846254 |
ttggtttgttgtatgggtaacacttagcttgtttcatgcattccacttgacacatggcttgttgtatgtattcctcgtgagtcatgaca |
9846166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 3547013 - 3547107
Alignment:
| Q |
87 |
taacatttggcttgttgtatgtattcctcttaacgcttggcttgttgcatgtatttctcgtgagtcatgac-----aattattgcatgggtaacactt |
179 |
Q |
| |
|
||||| ||| |||| || |||||||| |||| || ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |
|
|
| T |
3547013 |
taacacttgacttgctgcatgtattcatcttgacacttggcttgttgcatgtat---tcgtgagtcatgacacttgatttattgcatgggtaacactt |
3547107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 3546833 - 3546927
Alignment:
| Q |
160 |
ttattgcatgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttatt |
254 |
Q |
| |
|
|||||||||| |||| ||||||||| | | |||||||| || || || |||||| |||||||||||| | ||||||||||||||||||||| |
|
|
| T |
3546833 |
ttattgcatgtgtaatacttgacttgctacatgtattccttttaactcttaacttgtcacatgtattcctcttaagtcatgacacttggtttatt |
3546927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 419
Target Start/End: Original strand, 3547110 - 3547229
Alignment:
| Q |
302 |
cttgctgcatgtattcctcgtgagtcatgacacttga---ttcattgcatgagtaacacttagctagttgcatgcattattcttagcacttgagatgcat |
398 |
Q |
| |
|
|||||| |||||||||||| | |||||||| |||||| | |||||||| ||||| |||| || ||||||||| ||| |||| || ||| |||| || |
|
|
| T |
3547110 |
cttgctacatgtattcctcttaagtcatgatacttgacttattattgcatgggtaacgcttaacttgttgcatgctttactcttgacatttgcgatg-at |
3547208 |
T |
 |
| Q |
399 |
tttaggcgcccaaaggtacaa |
419 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
3547209 |
tttaggcgcccaaatgtacaa |
3547229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 42737149 - 42737239
Alignment:
| Q |
167 |
atgggtaacacttgacttattgtaagtattcctcttgacatttgacttgttgcatgtattcctcatgagtcatgacacttggtttattgca |
257 |
Q |
| |
|
|||| |||||||||||||| |||| |||| | ||| ||||||| |||||||||| |||||||| |||||||||||||| ||||||||| |
|
|
| T |
42737149 |
atggataacacttgacttactgtatgtatatcccttaacatttggtttgttgcatgcattcctcacgagtcatgacacttaatttattgca |
42737239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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