View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2733_low_23 (Length: 203)
Name: NF2733_low_23
Description: NF2733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2733_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 1331434 - 1331282
Alignment:
| Q |
19 |
cataggtcacaccaattgcatcaacattaacgtcattagtaccatcatgagtcgcgtcatttgcatcaacaatgtcgtcatcatcaacaaaattttcaac |
118 |
Q |
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| T |
1331434 |
cataggtcacaccaattgcatcaacattaacgtcatcagtaccatcatgagtcgcgtcatttgcatcaacaatgtcgtcattatcaacaaaattttcaac |
1331335 |
T |
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| Q |
119 |
atgagtaataacaagtgttgcacccgcgcttcaaaagccttggaggatgctatgccgtatg |
179 |
Q |
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| T |
1331334 |
atgagtaataacaagtg--------gcacttcaaaagccttggaggatgctatgccgtatg |
1331282 |
T |
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