View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2734_high_14 (Length: 368)
Name: NF2734_high_14
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2734_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 11056956 - 11057299
Alignment:
| Q |
11 |
atgaagattgaattagatgttttgtgtgatgatgaagacattttatgctggggttcttgagctgaattatgttgtagttattttcataagtttattatcg |
110 |
Q |
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| T |
11056956 |
atgaagattgaattagatgttttgtgtgatgatgaagacattttatgctggggttcatgagctgaattatgttgtagttattttcataagtttattatcg |
11057055 |
T |
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| Q |
111 |
cgatttctgaatctaaaatgtactaaaaaccattgtttcaattagattgggatataggaaatgaacgagagtcaaaatttagtcctgtgggatttattta |
210 |
Q |
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| T |
11057056 |
cgatttctgaatctaaaatgtactaaaaaccattgtttcaattagattgggatataggaaatgaacgagagtcaaaatttagtcctgtgggatttattta |
11057155 |
T |
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| Q |
211 |
actgtttccagttttgcacatttaatactacagtacacctcagataatcttgttatagatcttttactttagtaccagcccatagccgtaagttcttggc |
310 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
11057156 |
actgtttccagttttgcacatttagtactacagtacacctcagataatcttgttatagatcttttactttagtaccagcccgtagccgtaagttcttggc |
11057255 |
T |
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| Q |
311 |
aagatgtcttacaaattgacagctcgttccgtttgtgttgttat |
354 |
Q |
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| T |
11057256 |
aagatgtctttcaaattgacagttcgttccgtttgtgttgttat |
11057299 |
T |
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