View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2734_high_20 (Length: 302)
Name: NF2734_high_20
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2734_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 44779913 - 44780150
Alignment:
| Q |
17 |
atacagttagctcggtccctgatgcacacttctcacgggctaggtctgaagggattcttgaagtagcttacaattttatgtaatgcaacgaaatctcacc |
116 |
Q |
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| T |
44779913 |
atacacttagctcggtccctgatgcacacttctcacgggctaggtctga-gggattcttgaagtagcttacaattttatgaaatgcaacgaaatctcacc |
44780011 |
T |
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| Q |
117 |
ttgataaagtgatttggttcattttcatgctatcattcaagaaacatttgtttgaacaattagttttgatcatgcatttattaataaatatagttaattt |
216 |
Q |
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| T |
44780012 |
ttgataaagtgatttggttcattttcatgctatcattcaagaaatatttgtttgaacaattagttttgatcatgcatttattaataaatatggttaatta |
44780111 |
T |
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| Q |
217 |
ggtaaaattgtaatttttaacactacctccatccctaat |
255 |
Q |
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| T |
44780112 |
ggtaaaattgcaatttttaatactacctccgtccttaat |
44780150 |
T |
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