View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2734_high_24 (Length: 263)
Name: NF2734_high_24
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2734_high_24 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 245
Target Start/End: Original strand, 36744894 - 36745124
Alignment:
| Q |
15 |
caaaggaacacttggagattaacacggatggactcacagtagaaaaggtaaatatatgtgtattgtttcaaagaaaatcacacaagacattatatatgtc |
114 |
Q |
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| T |
36744894 |
caaaagaacacttggagattaacacggatggactcacagtagaaaaggtaaatatatgtgtattgtttcaaagaaaatcacacaagacattatatatgtc |
36744993 |
T |
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| Q |
115 |
ttcattgatttatcctcttgatgttgattgaatttgtattcatttacttgtggaacaggcaattcaagacgagaggctattcattttggattaccatgac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36744994 |
ttcattgatttatcctcttgatgttgattgaatttgtattcatttacttgtggaacaggcaattcaagacgagaggctattcattttggattaccatgac |
36745093 |
T |
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| Q |
215 |
gcattcatgtcatacttgaagtatataaaca |
245 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
36745094 |
gcattcatgtcatacttgaagtatataaaca |
36745124 |
T |
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