View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2734_high_25 (Length: 253)

Name: NF2734_high_25
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2734_high_25
NF2734_high_25
[»] chr8 (30 HSPs)
chr8 (16-253)||(17468446-17468688)
chr8 (134-213)||(2572038-2572118)
chr8 (136-213)||(15816111-15816189)
chr8 (136-213)||(22651975-22652053)
chr8 (134-213)||(29447092-29447172)
chr8 (137-198)||(25566841-25566903)
chr8 (136-213)||(29510286-29510364)
chr8 (137-213)||(21465412-21465489)
chr8 (136-188)||(36450762-36450814)
chr8 (142-188)||(4948657-4948703)
chr8 (144-238)||(8342979-8343071)
chr8 (136-238)||(13436925-13437024)
chr8 (136-187)||(30271300-30271351)
chr8 (70-132)||(17468304-17468366)
chr8 (136-193)||(41831943-41832000)
chr8 (134-195)||(41838124-41838185)
chr8 (144-188)||(8343323-8343367)
chr8 (136-188)||(18407718-18407770)
chr8 (136-188)||(22595993-22596045)
chr8 (136-188)||(24613520-24613571)
chr8 (144-188)||(30077395-30077439)
chr8 (145-188)||(20873077-20873120)
chr8 (135-213)||(28745496-28745575)
chr8 (145-211)||(44067524-44067590)
chr8 (138-188)||(22197750-22197800)
chr8 (136-186)||(31556996-31557045)
chr8 (146-188)||(40332200-40332242)
chr8 (136-188)||(4298894-4298946)
chr8 (144-211)||(7442852-7442920)
chr8 (137-188)||(31514872-31514924)
[»] chr7 (32 HSPs)
chr7 (136-241)||(11272542-11272648)
chr7 (136-213)||(24339641-24339719)
chr7 (136-213)||(9408316-9408394)
chr7 (136-196)||(3991323-3991384)
chr7 (136-188)||(25481901-25481953)
chr7 (135-213)||(11831430-11831509)
chr7 (144-210)||(26033446-26033513)
chr7 (137-213)||(11665422-11665499)
chr7 (144-199)||(5409832-5409888)
chr7 (140-199)||(7058429-7058489)
chr7 (144-199)||(18215182-18215238)
chr7 (136-199)||(27945040-27945104)
chr7 (144-199)||(43027465-43027521)
chr7 (136-187)||(8234145-8234196)
chr7 (137-199)||(9778500-9778563)
chr7 (137-215)||(13300410-13300489)
chr7 (138-199)||(32094016-32094079)
chr7 (156-213)||(2334269-2334326)
chr7 (136-205)||(7438705-7438775)
chr7 (136-213)||(25822654-25822732)
chr7 (156-204)||(18039018-18039067)
chr7 (136-188)||(11061084-11061136)
chr7 (136-188)||(13770690-13770742)
chr7 (136-180)||(35861963-35862007)
chr7 (134-181)||(41020493-41020540)
chr7 (156-205)||(21560522-21560572)
chr7 (145-195)||(43250001-43250051)
chr7 (144-188)||(19213810-19213854)
chr7 (137-196)||(19992001-19992061)
chr7 (144-188)||(21880159-21880203)
chr7 (136-188)||(24105677-24105729)
chr7 (136-188)||(40287365-40287416)
[»] chr6 (38 HSPs)
chr6 (136-211)||(16766696-16766772)
chr6 (134-213)||(5970090-5970170)
chr6 (136-211)||(9107354-9107430)
chr6 (136-213)||(8365501-8365579)
chr6 (138-199)||(10770670-10770732)
chr6 (136-188)||(34595133-34595185)
chr6 (134-213)||(8713976-8714057)
chr6 (136-188)||(1681757-1681809)
chr6 (136-188)||(7801164-7801216)
chr6 (136-188)||(8776981-8777033)
chr6 (136-188)||(16833307-16833359)
chr6 (140-188)||(31384923-31384971)
chr6 (144-208)||(9522898-9522963)
chr6 (144-238)||(21395268-21395359)
chr6 (139-188)||(31959161-31959210)
chr6 (136-188)||(853867-853919)
chr6 (136-188)||(7977838-7977890)
chr6 (136-188)||(12696323-12696375)
chr6 (136-187)||(17841598-17841649)
chr6 (136-238)||(7930304-7930405)
chr6 (134-188)||(15489740-15489794)
chr6 (136-188)||(1191708-1191760)
chr6 (137-188)||(17302556-17302608)
chr6 (144-188)||(28152106-28152149)
chr6 (144-188)||(28715302-28715346)
chr6 (137-181)||(34225824-34225868)
chr6 (144-199)||(2117083-2117138)
chr6 (145-211)||(4118317-4118384)
chr6 (138-199)||(9911524-9911587)
chr6 (134-188)||(17435196-17435250)
chr6 (136-186)||(25010212-25010262)
chr6 (157-213)||(16488572-16488629)
chr6 (136-181)||(34290092-34290137)
chr6 (136-188)||(426522-426574)
chr6 (136-188)||(7938115-7938167)
chr6 (144-199)||(9025490-9025546)
chr6 (140-184)||(10827573-10827617)
chr6 (133-188)||(24645476-24645532)
[»] chr3 (38 HSPs)
chr3 (136-213)||(14209112-14209190)
chr3 (136-238)||(34910316-34910421)
chr3 (136-213)||(4987273-4987351)
chr3 (136-201)||(27505245-27505311)
chr3 (136-213)||(28812514-28812592)
chr3 (137-238)||(1509539-1509638)
chr3 (136-188)||(10954951-10955003)
chr3 (134-213)||(14216889-14216969)
chr3 (134-213)||(14223018-14223098)
chr3 (136-188)||(55401074-55401126)
chr3 (136-214)||(14829689-14829767)
chr3 (137-188)||(26508110-26508161)
chr3 (136-195)||(35994739-35994797)
chr3 (139-213)||(41961632-41961707)
chr3 (136-213)||(750600-750678)
chr3 (144-197)||(28918008-28918062)
chr3 (136-211)||(15796278-15796354)
chr3 (136-188)||(20503464-20503516)
chr3 (144-199)||(25948883-25948939)
chr3 (144-199)||(49651782-49651838)
chr3 (134-238)||(3163986-3164087)
chr3 (137-188)||(21256994-21257045)
chr3 (144-210)||(34185108-34185175)
chr3 (137-188)||(51206361-51206412)
chr3 (144-213)||(14832106-14832176)
chr3 (145-210)||(16789020-16789086)
chr3 (136-188)||(8587029-8587081)
chr3 (136-188)||(10268494-10268546)
chr3 (136-180)||(14979180-14979224)
chr3 (136-188)||(16000024-16000076)
chr3 (136-188)||(21479117-21479169)
chr3 (145-195)||(24205042-24205092)
chr3 (144-238)||(4990927-4991019)
chr3 (144-181)||(7928457-7928494)
chr3 (136-211)||(14747560-14747637)
chr3 (136-188)||(10335294-10335346)
chr3 (144-188)||(11610528-11610572)
chr3 (145-188)||(25775516-25775560)
[»] chr5 (33 HSPs)
chr5 (137-213)||(39698541-39698618)
chr5 (136-213)||(21542029-21542107)
chr5 (136-213)||(37328826-37328904)
chr5 (136-213)||(19579700-19579778)
chr5 (136-213)||(21522749-21522827)
chr5 (136-213)||(21533315-21533393)
chr5 (136-212)||(7677704-7677781)
chr5 (136-196)||(10298568-10298629)
chr5 (136-188)||(6247621-6247673)
chr5 (136-188)||(21191064-21191116)
chr5 (136-211)||(21351889-21351965)
chr5 (136-188)||(42893359-42893411)
chr5 (134-212)||(13287383-13287461)
chr5 (138-188)||(21576753-21576803)
chr5 (136-238)||(41995470-41995568)
chr5 (136-188)||(14674268-14674320)
chr5 (136-188)||(31084322-31084374)
chr5 (136-188)||(33178024-33178076)
chr5 (137-188)||(15405063-15405114)
chr5 (133-188)||(43001796-43001851)
chr5 (157-213)||(6401518-6401575)
chr5 (144-211)||(3966510-3966578)
chr5 (136-188)||(4105256-4105310)
chr5 (145-188)||(24906309-24906352)
chr5 (136-198)||(30183548-30183611)
chr5 (134-188)||(7218275-7218329)
chr5 (136-198)||(18316923-18316985)
chr5 (157-213)||(21814281-21814338)
chr5 (136-188)||(30135312-30135365)
chr5 (140-181)||(40131624-40131665)
chr5 (136-196)||(41633734-41633795)
chr5 (144-188)||(8420034-8420078)
chr5 (156-188)||(15884007-15884039)
[»] chr1 (47 HSPs)
chr1 (136-238)||(113298-113397)
chr1 (137-199)||(24577182-24577245)
chr1 (136-213)||(47989497-47989574)
chr1 (145-213)||(6612153-6612222)
chr1 (136-199)||(1704988-1705052)
chr1 (136-188)||(22881624-22881676)
chr1 (136-188)||(40258941-40258993)
chr1 (137-199)||(1486705-1486768)
chr1 (139-213)||(32461446-32461520)
chr1 (137-198)||(6332671-6332732)
chr1 (134-188)||(38078669-38078723)
chr1 (137-213)||(28273070-28273147)
chr1 (134-211)||(31694694-31694774)
chr1 (137-206)||(17778549-17778616)
chr1 (136-188)||(32434724-32434776)
chr1 (137-188)||(18190116-18190167)
chr1 (137-188)||(22515895-22515946)
chr1 (137-188)||(42359457-42359508)
chr1 (147-213)||(44482240-44482307)
chr1 (136-213)||(9828043-9828121)
chr1 (146-188)||(18337338-18337380)
chr1 (136-213)||(25361885-25361963)
chr1 (138-188)||(31015044-31015094)
chr1 (136-186)||(31672905-31672955)
chr1 (136-188)||(51410023-51410076)
chr1 (136-188)||(1815256-1815308)
chr1 (136-188)||(14359530-14359581)
chr1 (136-188)||(21378577-21378629)
chr1 (136-188)||(37598831-37598882)
chr1 (136-188)||(46348391-46348443)
chr1 (135-213)||(9629882-9629961)
chr1 (136-213)||(40917750-40917826)
chr1 (156-213)||(30173744-30173802)
chr1 (138-188)||(48450595-48450645)
chr1 (144-181)||(398780-398817)
chr1 (144-212)||(5376483-5376552)
chr1 (136-188)||(13011223-13011276)
chr1 (156-212)||(15449215-15449272)
chr1 (134-188)||(18471295-18471351)
chr1 (145-194)||(22794080-22794129)
chr1 (136-181)||(23738677-23738722)
chr1 (157-213)||(25934636-25934693)
chr1 (136-181)||(34298435-34298480)
chr1 (156-199)||(5944302-5944346)
chr1 (136-180)||(12443476-12443520)
chr1 (136-188)||(19058864-19058916)
chr1 (136-188)||(29144366-29144418)
[»] scaffold0361 (1 HSPs)
scaffold0361 (136-187)||(14529-14580)
[»] chr2 (27 HSPs)
chr2 (136-198)||(15657863-15657926)
chr2 (144-213)||(30717512-30717582)
chr2 (146-213)||(37419752-37419820)
chr2 (136-188)||(37558976-37559028)
chr2 (136-198)||(974746-974809)
chr2 (134-211)||(36756328-36756406)
chr2 (137-213)||(11223845-11223922)
chr2 (136-188)||(19536405-19536458)
chr2 (136-199)||(12668419-12668483)
chr2 (134-197)||(20539672-20539736)
chr2 (136-188)||(21374707-21374759)
chr2 (138-204)||(23058433-23058501)
chr2 (137-188)||(2438727-2438778)
chr2 (137-184)||(12940947-12940994)
chr2 (137-188)||(18841021-18841072)
chr2 (145-188)||(30404858-30404901)
chr2 (136-213)||(26769510-26769588)
chr2 (136-188)||(15972872-15972924)
chr2 (136-188)||(18421962-18422014)
chr2 (136-188)||(20473321-20473373)
chr2 (136-184)||(30335416-30335464)
chr2 (136-188)||(38117167-38117219)
chr2 (144-213)||(4882678-4882748)
chr2 (134-188)||(39323261-39323315)
chr2 (144-181)||(28677916-28677953)
chr2 (136-188)||(24894388-24894440)
chr2 (156-188)||(33153443-33153475)
[»] chr4 (36 HSPs)
chr4 (134-238)||(4383365-4383470)
chr4 (136-213)||(19482667-19482745)
chr4 (144-238)||(11596312-11596404)
chr4 (134-213)||(24613683-24613763)
chr4 (134-213)||(27706159-27706239)
chr4 (137-188)||(54580031-54580082)
chr4 (137-213)||(51701258-51701335)
chr4 (136-188)||(3947774-3947826)
chr4 (137-237)||(12708146-12708245)
chr4 (136-188)||(21945502-21945554)
chr4 (136-188)||(23292994-23293046)
chr4 (144-188)||(28964256-28964300)
chr4 (144-188)||(29205451-29205495)
chr4 (140-188)||(40481640-40481687)
chr4 (142-188)||(12797346-12797391)
chr4 (134-184)||(47263983-47264033)
chr4 (134-195)||(11651135-11651196)
chr4 (144-199)||(12895112-12895168)
chr4 (136-188)||(34306812-34306863)
chr4 (136-188)||(35157993-35158045)
chr4 (136-188)||(38847020-38847072)
chr4 (137-188)||(4157150-4157200)
chr4 (145-188)||(6485619-6485662)
chr4 (136-197)||(30298945-30299008)
chr4 (136-197)||(30327813-30327876)
chr4 (144-195)||(37203271-37203322)
chr4 (138-188)||(16073396-16073445)
chr4 (144-213)||(30982860-30982930)
chr4 (136-188)||(715615-715668)
chr4 (136-188)||(752941-752994)
chr4 (138-183)||(14465088-14465133)
chr4 (136-188)||(49431024-49431077)
chr4 (136-188)||(2361983-2362035)
chr4 (136-188)||(12895282-12895334)
chr4 (156-188)||(42640548-42640580)
chr4 (136-212)||(50280880-50280958)
[»] scaffold0223 (1 HSPs)
scaffold0223 (136-188)||(20171-20223)
[»] scaffold0103 (1 HSPs)
scaffold0103 (136-188)||(51810-51862)
[»] scaffold0011 (1 HSPs)
scaffold0011 (137-188)||(17757-17808)
[»] scaffold0450 (1 HSPs)
scaffold0450 (136-213)||(8617-8695)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-213)||(241593-241671)
[»] scaffold0136 (1 HSPs)
scaffold0136 (145-213)||(3831-3900)
[»] scaffold0122 (1 HSPs)
scaffold0122 (136-181)||(8009-8054)
[»] scaffold0018 (1 HSPs)
scaffold0018 (136-188)||(178826-178879)
[»] scaffold0246 (1 HSPs)
scaffold0246 (140-188)||(19579-19626)
[»] scaffold0227 (1 HSPs)
scaffold0227 (136-188)||(7319-7371)
[»] scaffold0306 (1 HSPs)
scaffold0306 (136-185)||(13399-13448)
[»] scaffold0152 (1 HSPs)
scaffold0152 (136-185)||(21879-21928)
[»] scaffold0044 (1 HSPs)
scaffold0044 (146-210)||(53189-53254)
[»] scaffold0652 (1 HSPs)
scaffold0652 (144-188)||(470-514)
[»] scaffold0066 (1 HSPs)
scaffold0066 (136-184)||(33375-33423)
[»] scaffold0027 (1 HSPs)
scaffold0027 (136-184)||(46681-46729)
[»] scaffold0021 (1 HSPs)
scaffold0021 (136-188)||(130481-130533)
[»] scaffold0050 (1 HSPs)
scaffold0050 (133-188)||(70274-70329)
[»] scaffold0025 (1 HSPs)
scaffold0025 (156-198)||(23789-23832)
[»] scaffold0019 (1 HSPs)
scaffold0019 (136-211)||(71722-71800)
[»] scaffold0722 (1 HSPs)
scaffold0722 (134-188)||(7040-7094)
[»] scaffold0171 (2 HSPs)
scaffold0171 (156-213)||(23530-23588)
scaffold0171 (156-199)||(23439-23483)
[»] scaffold0008 (1 HSPs)
scaffold0008 (144-213)||(263354-263424)
[»] scaffold0793 (1 HSPs)
scaffold0793 (136-188)||(4891-4944)
[»] scaffold0053 (1 HSPs)
scaffold0053 (136-188)||(8797-8849)
[»] scaffold0004 (1 HSPs)
scaffold0004 (144-188)||(92814-92858)


Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 17468688 - 17468446
Alignment:
Q  16 atactaagaagactcgctaatcaatttcaaattcggtatttcagattgtgtatgcaatcatacctgagtgaaacgaggttggcggaagtgaatagcgttt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17468688 atactaagaagactcgctaatcaatttcaaattcggtatttcagattgtgtatgcaatcatacctgagtgaaacgaggttggcggaagtgaatagcgttt 17468589  T
Q  116 tcgggagcttcaagtcgtgtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaa------gtgtggtgtcgtgtctgtgtcggac 209  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||      |||| |||||||||| |||||||||    
T  17468588 tcgggagcttgaagtcgtgtcgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgtcgtgtcggtgtcggac 17468489  T
Q  210 acgagggggacacgcctaatccgaggagtatcgaagcaccacac 253  Q
    ||||||||||||||||||||||||||||| || |||||||||||    
T  17468488 acgagggggacacgcctaatccgaggagtgtc-aagcaccacac 17468446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 2572118 - 2572038
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  2572118 gtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacga 2572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 15816189 - 15816111
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| |||||| ||||||||||  |||||||||||||    
T  15816189 cgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacga 15816111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 22651975 - 22652053
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||| |||||||||||||| || | ||||||||||||| ||||||||||| |||||||||||||    
T  22651975 cgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacga 22652053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 29447172 - 29447092
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||||||||||  ||||||||||||| || ||||| ||||||||| |||||| |||| |||||||||||||    
T  29447172 gtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacga 29447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 25566841 - 25566903
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgt 198  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 29510364 - 29510286
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||| |||||||||| ||| |||| ||||||||||||| ||||| ||||| |||||||||||||    
T  29510364 cgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacga 29510286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 21465412 - 21465489
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| ||||||||||| |||||||| ||||| |  |||||||||||||| |||||||||||| |||||||||||||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacga 21465489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 36450814 - 36450762
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  36450814 cgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 4948657 - 4948703
Alignment:
Q  142 aactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4948703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 8342979 - 8343071
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgaggagt 238  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||   |||||| |||||    |||||||||||||||||| ||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacac---cgggacacgcctaatccgaagagt 8343071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 13437024 - 13436925
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgag 234  Q
    ||||||| ||||||||||| |||||||||||||| ||  ||||| |||||||| ||||||||||| ||||| |||||    |||||||||||||||| ||    
T  13437024 cgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtc-gacac---cgggacacgcctaatccaag 13436929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 30271351 - 30271300
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg 187  Q
    ||||||| ||||| ||||| |||||||||||||| |||||||||||||||||    
T  30271351 cgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 17468366 - 17468304
Alignment:
Q  70 caatcatacctgagtgaaacgaggttggcggaagtgaatagcgttttcgggagcttcaagtcg 132  Q
    ||||||||||||||||||| ||||||||| |||||||| ||  |||||||||| || ||||||    
T  17468366 caatcatacctgagtgaaatgaggttggctgaagtgaacaggcttttcgggagattgaagtcg 17468304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 41832000 - 41831943
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgt 193  Q
    |||||||  |||||||||| |||||||||||||| |||||||| ||||||||| ||||    
T  41832000 cgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 41838185 - 41838124
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcg 195  Q
    ||||||||| ||||||||||  |||||||||||||| ||||| || ||||||||| ||||||    
T  41838185 gtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtcg 41838124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 8343323 - 8343367
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgt 8343367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 18407718 - 18407770
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| |||||||||   |||||||||||||| ||||||||||||||||||    
T  18407718 cgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgt 18407770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 22595993 - 22596045
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  |||||| ||||||| ||||||||||||||||||    
T  22595993 cgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 24613520 - 24613571
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||||||||||||    
T  24613520 cgacacagctaataatttg-aaaaatcacataattaagtgtaattacaagtgt 24613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 30077439 - 30077395
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgt 30077395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 20873077 - 20873120
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||| ||||||||||||||  |||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgt 20873120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 28745496 - 28745575
Alignment:
Q  135 tcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||  ||||||||||| |||| ||||||||| || ||||| ||||| ||| | ||||||||| |||||||||||||    
T  28745496 tcgacactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacga 28745575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 44067524 - 44067590
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtc-gtgtctgtgtcggacac 211  Q
    ||||||||||  ||||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||||    
T  44067524 taataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc-gtgtcggacac 44067590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 22197800 - 22197750
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||| ||||||||||| |||| |||||||||  |||||||||||||||||    
T  22197800 acacagctaataatttgaaaaattcacataatttagtgtaattacaagtgt 22197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 31556996 - 31557045
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagt 186  Q
    |||||||  |||||||||| |||||||||||||| ||||||||||||||||    
T  31556996 cgacacagttaataatttg-aaaaatcacataattcagtgtaattacaagt 31557045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 40332200 - 40332242
Alignment:
Q  146 aataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||  ||||||||||||| ||||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgt 40332242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 4298946 - 4298894
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||  |||||||||| ||||||||||||||  | |||||||||||||||    
T  4298946 cgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgt 4298894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 7442852 - 7442920
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacac 211  Q
    ||||||||||   ||||| ||||||| ||||||||||||||||| |||||| || || |||||||||||    
T  7442852 ctaataatttcataaaattacataattcagtgtaattacaagtgttggtgttgtatcagtgtcggacac 7442920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 31514872 - 31514924
Alignment:
Q  137 gacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| |||| |||||||||| ||| |||| |||||||||    
T  31514872 gacacaactaataatttgaaaaaaatcacataattcagcgtaactacaagtgt 31514924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 11272648 - 11272542
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacata--atacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccg 232  Q
    |||||||||| |||||||| ||||||||||||  || |||||||||||||||||| ||||||||||| |||||||||||| |||  ||||||||||||||    
T  11272648 cgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgcggg--acacgcctaatccg 11272551  T
Q  233 aggagtatc 241  Q
    |||||||||    
T  11272550 aggagtatc 11272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 24339641 - 24339719
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  24339641 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 24339719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 9408394 - 9408316
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||| |||||||||| ||||||||||||||  ||||||||||||||||| |||||||| || ||||| |||||||    
T  9408394 cgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacga 9408316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 3991323 - 3991384
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgt 196  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||    
T  3991323 cgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 25481901 - 25481953
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  25481901 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 11831430 - 11831509
Alignment:
Q  135 tcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagt-gtggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||  | ||||||| || |||||||||||||    
T  11831430 tcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagtattcgtgtcgtatcggtgtcggacacga 11831509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 26033513 - 26033446
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggaca 210  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||| ||||| ||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagaca 26033446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 11665499 - 11665422
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||||||| |||||||||||||| |||| |||||| |||||| | |||| |||| |||||| ||||||    
T  11665499 gacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacga 11665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 5409888 - 5409832
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||| |||||||||||    
T  5409888 ctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtc 5409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 7058429 - 7058489
Alignment:
Q  140 acaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtc 199  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||| ||||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgtc 7058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 18215238 - 18215182
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||    
T  18215238 ctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtc 18215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 27945040 - 27945104
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||| ||||||||||||  ||||| ||||||| |||||||||||||||||| |||||||||||    
T  27945040 cgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 43027521 - 43027465
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||    
T  43027521 ctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtc 43027465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 8234145 - 8234196
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg 187  Q
    ||||||||||||||||||| |||||| ||||||| ||||||| |||||||||    
T  8234145 cgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 9778500 - 9778563
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||| || |||||||| |||||||||||||| |||| ||||||||||||| |||||||||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtc 9778563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 13300410 - 13300489
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagg 215  Q
    |||| ||||||||||||| |||||||| ||||| |||||||||||| ||| | |||||| |||| |||||| ||||||||    
T  13300410 gacataactaataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtcatgtcggtgtcgaacacgagg 13300489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 32094079 - 32094016
Alignment:
Q  138 acacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||| ||| |||||||||||    
T  32094079 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtc 32094016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 2334269 - 2334326
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||    
T  2334269 aaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacga 2334326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 7438705 - 7438775
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtc 205  Q
    |||||||  |||||||||| |||||||||||||| || ||||||||||||||| |||||| |||| |||||    
T  7438705 cgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtc 7438775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 25822654 - 25822732
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| |||||   || ||| |||||||||||||||||| |||||||| || || ||||||||||    
T  25822654 cgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacga 25822732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 18039018 - 18039067
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgt 204  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  18039018 aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 11061136 - 11061084
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||||||||||||  ||| |||||||||||||    
T  11061136 cgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgt 11061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 13770690 - 13770742
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  |||||| ||||||| ||||||||||||||||||    
T  13770690 cgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgt 13770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 35861963 - 35862007
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatt 180  Q
    ||||||||||||||||||| |||||||||||||| || |||||||    
T  35861963 cgacacaactaataatttgaaaaaatcacataattcaatgtaatt 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 41020493 - 41020540
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  41020493 gtcgacacaactaataatttacaaaaatcacataatttagtgtaatta 41020540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 21560522 - 21560572
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtc 205  Q
    |||||||||||||| |||||||||||||||||| |||||||| || |||||    
T  21560522 aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtc 21560572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 43250001 - 43250051
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcg 195  Q
    ||||||||||  ||||| ||||||||||||||||||| |||||| ||||||    
T  43250001 taataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcg 43250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 19213810 - 19213854
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||    
T  19213810 ctaataattttaaaaaatcacataatgcagtgtaaatacaagtgt 19213854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 19992001 - 19992061
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgt 196  Q
    |||||| |||||||||||  ||||||||||| | ||||||||||| |||||| ||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 21880159 - 21880203
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||  ||||| ||||||| ||||||||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgt 21880203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 24105677 - 24105729
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||||  ||| || ||||||||||||||||||    
T  24105677 cgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgt 24105729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 40287416 - 40287365
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||| ||||||||| |||||||| ||| | ||||||||||||||||||    
T  40287416 cgacacaacgaataatttgaaaaaatcatatatt-cagtgtaattacaagtgt 40287365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 16766696 - 16766772
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  16766696 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 5970170 - 5970090
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||    
T  5970170 gtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacga 5970090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 9107430 - 9107354
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||| ||||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||    
T  9107430 cgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 9107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 8365579 - 8365501
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| ||| |||||||||| | |||||||||||||||| ||||||||||| || ||||||||||    
T  8365579 cgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacga 8365501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 10770732 - 10770670
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  10770732 acacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 34595133 - 34595185
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  34595133 cgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgt 34595185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 8713976 - 8714057
Alignment:
Q  134 gtcgacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||  |||||||||| |||| |||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||    
T  8713976 gtcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacga 8714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 1681757 - 1681809
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  1681757 cgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgt 1681809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 7801216 - 7801164
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  7801216 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 7801164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 8777033 - 8776981
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  8777033 cgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 16833307 - 16833359
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  16833307 cgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgt 16833359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 31384923 - 31384971
Alignment:
Q  140 acaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgt 31384971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 9522898 - 9522963
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcgga 208  Q
    ||||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcgga 9522963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 21395359 - 21395268
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgaggagt 238  Q
    |||||||||||  ||||| |||||||  ||||||||||||||||| ||||||||||| ||||||||||| |   ||||||||||||||| ||||||    
T  21395359 ctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacacca---ggacacgcctaatccaaggagt 21395268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 31959161 - 31959210
Alignment:
Q  139 cacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  31959161 cacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgt 31959210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 853919 - 853867
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  853919 cgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgt 853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 7977890 - 7977838
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  7977890 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 7977838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 12696323 - 12696375
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  12696323 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 12696375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 17841649 - 17841598
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg 187  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||||||||    
T  17841649 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 7930304 - 7930405
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc-tgtgtcggacacgagggggacacgcctaatccga 233  Q
    |||||||| |||||||||| ||||||||||||||  |||| |||| ||||||| |||||||||||  ||||| ||||| |   ||||||||||||| |||    
T  7930304 cgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtcacgtgtccgacacca---ggacacgcctaattcga 7930400  T
Q  234 ggagt 238  Q
    |||||    
T  7930401 ggagt 7930405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 15489794 - 15489740
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||||| |||||| ||| ||| || |||||||||||||||    
T  15489794 gtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgt 15489740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 1191760 - 1191708
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  1191760 cgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgt 1191708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 17302556 - 17302608
Alignment:
Q  137 gacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| |||| |||||||||| || |||||||||||||||    
T  17302556 gacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgt 17302608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 28152106 - 28152149
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  28152106 ctaataatttg-aaaaatcacataattcagtgtaattacaagtgt 28152149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 28715302 - 28715346
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  28715302 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgt 28715346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 34225868 - 34225824
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 2117083 - 2117138
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| || || ||||| |||||| ||||||||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtcgtgtc 2117138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 4118384 - 4118317
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacac 211  Q
    |||||||||| ||||||||||||||  | |||||||||||||| |||| | ||||| |||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacac 4118317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 9911587 - 9911524
Alignment:
Q  138 acacaactaataatttgtaa-aaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||| ||||||||||  || |||||||||||| |||||||||||||||||| |||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 17435196 - 17435250
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| | ||||||||||  |||||| ||||||| ||||||||||||||||||    
T  17435196 gtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 25010262 - 25010212
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagt 186  Q
    ||||||| ||||||||||| |||||||||||||| ||| || |||||||||    
T  25010262 cgacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 16488629 - 16488572
Alignment:
Q  157 aaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||| ||| ||||||||||| | |||| ||||||||||| |||||||||||||    
T  16488629 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 16488572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 34290137 - 34290092
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    |||||||||||||||||||  | ||||||||||| |||||||||||    
T  34290137 cgacacaactaataatttgcgagaatcacataattcagtgtaatta 34290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 426574 - 426522
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||  |||||||||| ||||||||||||||  | |||||||||||||||    
T  426574 cgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgt 426522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 7938115 - 7938167
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||| |||||  |||||||||| ||||||    
T  7938115 cgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgt 7938167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 9025546 - 9025490
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||||||||  ||||||||||||| ||||||||||| | |||| |||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 10827617 - 10827573
Alignment:
Q  140 acaactaataatttgtaaaaatcacataatacagtgtaattacaa 184  Q
    ||||||||||||||| | ||||||||||| | |||||||||||||    
T  10827617 acaactaataatttgaagaaatcacataacatagtgtaattacaa 10827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 24645476 - 24645532
Alignment:
Q  133 tgtcgacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt 188  Q
    |||||||||| ||||||||||| |||| |||||||||| |||| || ||||||||||    
T  24645476 tgtcgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgt 24645532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 14209112 - 14209190
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||||||  |||||||||| |||||||||||||    
T  14209112 cgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 14209190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 34910316 - 34910421
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacg--agggggacacgcctaatccg 232  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||| || |||||||||| |  |  |||||||| ||||||||    
T  34910316 cgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacaccgggacacgtctaatccg 34910415  T
Q  233 aggagt 238  Q
    ||||||    
T  34910416 aggagt 34910421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 4987351 - 4987273
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| |||| ||||||||    
T  4987351 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacga 4987273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 27505245 - 27505311
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctg 201  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||    
T  27505245 cgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctg 27505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 28812514 - 28812592
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| | |||||||||||| ||||||| |||||||||| ||||||||||  ||||| |||||||    
T  28812514 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 28812592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 1509539 - 1509638
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgagg 235  Q
    |||||| ||||||||||| ||||||||||||||  ||||||||||||||||| |||||||| || ||||| |||||    || |||||||||||| ||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac---cggtacacgcctaatcggagg 1509635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 10954951 - 10955003
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  10954951 cgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgt 10955003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 14216889 - 14216969
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||||  |||||||||  |||||||||||||    
T  14216889 gtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14216969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 14223018 - 14223098
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||||  |||||||||  |||||||||||||    
T  14223018 gtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 55401074 - 55401126
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  55401074 cgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgt 55401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 14829689 - 14829767
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgag 214  Q
    ||||||| ||||||||||| |||||||||||||| ||  |||||||||||||| ||||||||||| |||| |||||||||    
T  14829689 cgacacagctaataatttg-aaaaatcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgag 14829767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 26508110 - 26508161
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 26508161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 35994797 - 35994739
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcg 195  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  35994797 cgacacagctaataatttg-aaaaatcacataattcagtgtaattacaagtgtcgtgtcg 35994739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 41961707 - 41961632
Alignment:
Q  139 cacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||||| ||| ||||||| || | |||||||||||||||| ||||||||||| || ||||||||||    
T  41961707 cacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacga 41961632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 750678 - 750600
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| ||| |||||||||| |  || |||||||||||| ||||||||||| || ||||||||||    
T  750678 cgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacga 750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 28918008 - 28918062
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtg 197  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 15796354 - 15796278
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    |||||||  |||||||||| |||||||| ||||| |||||||||||||| ||| ||||||||||  |||||||||||    
T  15796354 cgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacac 15796278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 20503464 - 20503516
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||    
T  20503464 cgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgt 20503516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 25948939 - 25948883
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtc 25948883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 49651838 - 49651782
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtc 49651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 3164087 - 3163986
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccg 232  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||  ||||||| || ||||||||| ||||| |||||    | |||||||||||| ||    
T  3164087 gtcgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtc-gtgtccgacac---cgagacacgcctaattcg 3163992  T
Q  233 aggagt 238  Q
    ||||||    
T  3163991 aggagt 3163986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 21257045 - 21256994
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||| |||||||||||||| |||| |||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgt 21256994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 34185175 - 34185108
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggaca 210  Q
    ||||||||||  |||||||||| ||| |||||||||||||||||| |||||||||||  |||||||||    
T  34185175 ctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggaca 34185108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 51206412 - 51206361
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||| |||||||||||||| |||||||| |||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgt 51206361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 14832106 - 14832176
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||| |||||||||||||  || |||||||||||||||  |||||||||| || ||||||||||    
T  14832106 ctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacga 14832176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 16789020 - 16789086
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggaca 210  Q
    |||||||||  |||||||| ||||| ||||||||||| ||||| |||||||||||| ||||||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggaca 16789086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 8587081 - 8587029
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||| ||||||| ||||||||||||||  |||||||||||||||||    
T  8587081 cgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgt 8587029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 10268546 - 10268494
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||  |||||||||| ||||||||||||||  |||||||||||||||||    
T  10268546 cgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgt 10268494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 14979180 - 14979224
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatt 180  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||    
T  14979180 cgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 16000076 - 16000024
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||  |||||| ||||||| |||||||| |||||||||    
T  16000076 cgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgt 16000024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 21479117 - 21479169
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||| ||| |||||||||||| |||||    
T  21479117 cgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgt 21479169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 24205092 - 24205042
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcg 195  Q
    ||||||||||  ||||| ||||||||||||||||||| |||||| ||||||    
T  24205092 taataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcg 24205042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 4991019 - 4990927
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgaggagt 238  Q
    |||||| ||||  ||||| ||||||| |||||||||||||||||| || |||||||  || || |||||   | ||||||||||||||||||||||    
T  4991019 ctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacac---gtggacacgcctaatccgaggagt 4990927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 7928457 - 7928494
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaatta 7928494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 14747560 - 14747637
Alignment:
Q  136 cgacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||| ||||||||||| |||| ||||||||||  |||||||||||||| ||  ||||||||||||| || |||||    
T  14747560 cgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgtctgtatccgacac 14747637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 10335346 - 10335294
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||| ||||||| |  ||||||| |||||||||    
T  10335346 cgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgt 10335294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 11610528 - 11610572
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||  |||||||||||||| ||||||| ||||||||||    
T  11610528 ctaataatttaaaaaaatcacataattcagtgtagttacaagtgt 11610572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 25775516 - 25775560
Alignment:
Q  145 taataatttgtaaa-aatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||    
T  25775516 taataatttgaaaataatcacataattcagtgtaattacaagtgt 25775560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 39698541 - 39698618
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||  |||||||||| |||||||||||||    
T  39698541 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 39698618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 21542029 - 21542107
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||  ||| || ||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  21542029 cgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 21542107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 37328904 - 37328826
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| | |||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||| |||||||||||||    
T  37328904 cgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacga 37328826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 19579700 - 19579778
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| |||||||||||  |||||||||||||  |||| |||||||||||| ||||||||||| |||||||||||||    
T  19579700 cgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacga 19579778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 21522749 - 21522827
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||  |||||| ||||||| |||||||||||||| ||| ||||||||||| |||||||||||||    
T  21522749 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21522827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 21533315 - 21533393
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||  |||||| ||||||| |||||||||||||| ||| ||||||||||| |||||||||||||    
T  21533315 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21533393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 7677704 - 7677781
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacg 212  Q
    ||||||| ||||||||||| |||||||||||||| ||||| ||||| |||||| ||||||||||| ||||| ||||||    
T  7677704 cgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacg 7677781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 10298568 - 10298629
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgt 196  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||    
T  10298568 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgt 10298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 6247621 - 6247673
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  6247621 cgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 6247673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 21191116 - 21191064
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  21191116 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 21191064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 21351965 - 21351889
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |||||| |||| ||||| |||||    
T  21351965 cgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 42893359 - 42893411
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  42893359 cgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgt 42893411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 13287461 - 13287383
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacg 212  Q
    |||||||||  |||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||  |||||||||||    
T  13287461 gtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc-ctgtcggacacg 13287383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 21576803 - 21576753
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 21576753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 41995470 - 41995568
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgag 234  Q
    ||||||||||||||||| | |||||||||||||| || |||||||  |||||| |||| ||| || |||||||||||||   ||||||||||||||| ||    
T  41995470 cgacacaactaataattcgaaaaaatcacataattcaatgtaatt--aagtgtcggtgccgtatcggtgtcggacacga---ggacacgcctaatcctag 41995564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 14674268 - 14674320
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||||||||||||    
T  14674268 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgt 14674320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 31084322 - 31084374
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| || |||||||||||||||    
T  31084322 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgt 31084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 33178024 - 33178076
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  33178024 cgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgt 33178076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 15405114 - 15405063
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| |||||||| ||||| || |||||||||||||||    
T  15405114 gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgt 15405063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 43001796 - 43001851
Alignment:
Q  133 tgtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||  ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  43001796 tgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 6401518 - 6401575
Alignment:
Q  157 aaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||| ||||||||||||||| | |||| ||||||||||| |||||||||||||    
T  6401518 aaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacga 6401575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 3966510 - 3966578
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    |||||||||||  ||||||||| ||| ||||||||||| | |||| ||||||||||| |||||||||||    
T  3966510 ctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 4105256 - 4105310
Alignment:
Q  136 cgacacaactaataatttgtaaaaa--tcacataatacagtgtaattacaagtgt 188  Q
    ||||| ||||||||||||| |||||  ||||||||| ||||||||||||||||||    
T  4105256 cgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 24906352 - 24906309
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||    
T  24906352 taataatttgaaaaaatgacataattcagtgtaattacaagtgt 24906309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 30183548 - 30183611
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgt 198  Q
    ||||||||||||||||||| ||| ||||||| || | || ||||||||||||| ||||||||||    
T  30183548 cgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgt 30183611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 7218329 - 7218275
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| | ||||||||||  | |||||||||||| ||||||||||||||||||    
T  7218329 gtcgacagagctaataatttaaataaatcacataattcagtgtaattacaagtgt 7218275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 18316985 - 18316923
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcgtgt 198  Q
    ||||||||||||||||||  |||||||||||||||  || |||||| || | |||||||||||    
T  18316985 cgacacaactaataattttaaaaaatcacataatatggtataattataaatatggtgtcgtgt 18316923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 21814281 - 21814338
Alignment:
Q  157 aaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||| ||| ||||||||||| | |||| ||||||||||| |||||||||||||    
T  21814281 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 21814338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 30135312 - 30135365
Alignment:
Q  136 cgacacaactaataatttg-taaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||||  |||||||||||||  || |||||||||||||||    
T  30135312 cgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgt 30135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 40131624 - 40131665
Alignment:
Q  140 acaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaatta 40131665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 41633734 - 41633795
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgt 196  Q
    ||||||| ||||||||||| |||| | ||||||| |||||||||||||| ||| ||||||||    
T  41633734 cgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgt 41633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 8420034 - 8420078
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| |||||| ||||||| || |||||||||||||||    
T  8420034 ctaataatttgaaaaaataacataattcaatgtaattacaagtgt 8420078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 15884007 - 15884039
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||| ||||||||||||||||||    
T  15884007 aaaaatcacataattcagtgtaattacaagtgt 15884039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 113298 - 113397
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgag 234  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||  ||||    |||||||||||||||||||    
T  113298 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc-gtgtccaacac---cgggacacgcctaatccgag 113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 24577245 - 24577182
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 47989497 - 47989574
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||| |||||||||  |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  47989497 cgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 47989574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 6612222 - 6612153
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||| |||||| ||||||| |||||||||||||||||| |||||||||||  ||||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacga 6612153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 1705052 - 1704988
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||| ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||    
T  1705052 cgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 22881676 - 22881624
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  22881676 cgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgt 22881624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 40258993 - 40258941
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  40258993 cgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgt 40258941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 1486768 - 1486705
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 1486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 32461520 - 32461446
Alignment:
Q  139 cacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||||| ||||||||||||||  | |||||||||||||| |||||| ||||| |||||||||||||    
T  32461520 cacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacga 32461446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 6332671 - 6332732
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgt 198  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||||||||    
T  6332671 gacacaactaataatttg-aaaaatcacataattcagtgtaattacaagtatcggtgtcgtgt 6332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 38078723 - 38078669
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||| ||||||||||| |||||||||||||| || |||||||||||||||    
T  38078723 gtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgt 38078669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 28273147 - 28273070
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||| | ||  ||||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacga 28273070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 31694774 - 31694694
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaa--tcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||| | ||||||||||| |||||  ||||||||| |||| ||||||||||||| ||||||||||| |||||||||||    
T  31694774 gtcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 17778549 - 17778616
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcg 206  Q
    |||||| ||||||||||| |||||||||   ||||||||||||||||||||| ||||||||||| ||||||    
T  17778549 gacacagctaataatttgaaaaaatcac---atacagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 17778616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 32434776 - 32434724
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||| ||||||||| || |||||||||||||||    
T  32434776 cgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgt 32434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 18190167 - 18190116
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgt 18190116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 22515946 - 22515895
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||||||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgt 22515895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 42359508 - 42359457
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||| |||||||||| ||| ||||||||||||||||||    
T  42359508 gacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 42359457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 44482240 - 44482307
Alignment:
Q  147 ataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||  ||||||||||||| ||||||||||| | |||| ||||||||||| |||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 44482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 9828043 - 9828121
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| ||||||||||||  ||||||||||||| ||||||||||  | |||| ||||||||||| ||||| |||||||    
T  9828043 cgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacga 9828121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 18337338 - 18337380
Alignment:
Q  146 aataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgt 18337380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 25361885 - 25361963
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| ||| ||||||||  ||||||||||||| ||||||||||| | ||||  |||||||||| |||||||||||||    
T  25361885 cgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacga 25361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 31015044 - 31015094
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||| |||||||||||  ||||||||||||| ||||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgt 31015094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 31672955 - 31672905
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagt 186  Q
    ||||||| ||||||||||| ||||||||| |||| ||||||||||||||||    
T  31672955 cgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 51410023 - 51410076
Alignment:
Q  136 cgacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||    
T  51410023 cgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgt 51410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 1815256 - 1815308
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||| |||| ||||  |||||||||||||| ||||||||||||||||||    
T  1815256 cgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgt 1815308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 14359581 - 14359530
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||||||||||||    
T  14359581 cgacacagctaataatttg-aaaaatcacataatttagtgtaattacaagtgt 14359530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 21378577 - 21378629
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||| ||| |||||| ||||||| ||||||||||||||||||    
T  21378577 cgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgt 21378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 37598831 - 37598882
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||    
T  37598831 cgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgt 37598882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 46348443 - 46348391
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||| |||||  |||||||||||||||||    
T  46348443 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgt 46348391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 9629961 - 9629882
Alignment:
Q  135 tcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||  |||||||||||  ||||||| ||||| |||||| |||| |||||| |||||||||||  ||||||||||||    
T  9629961 tcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacga 9629882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 40917750 - 40917826
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||| |||||||||  |||  ||||||||||||||| | ||||||||||| |||| ||||||||    
T  40917750 cgacacagctaataatttgaaaaaatcac--aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacga 40917826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 30173802 - 30173744
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| ||||||  |||||||||||||||||| ||||||||||| || ||||||||||    
T  30173802 aaaaattacataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacga 30173744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 48450645 - 48450595
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||| ||||||||||| |||||| |||||||  |||||||||||||||||    
T  48450645 acacagctaataatttgaaaaaataacataatttagtgtaattacaagtgt 48450595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 398817 - 398780
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  398817 ctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 5376552 - 5376483
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacg 212  Q
    ||||||||||   ||||| ||||||| ||||||||||| |||||| |||||||||||  |||||||||||    
T  5376552 ctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 13011276 - 13011223
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||| |||||||||  |||||||||||||||||    
T  13011276 cgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 15449272 - 15449215
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacg 212  Q
    ||||||||||||||  |||||||||||||||||  ||||||| || ||||||||||||    
T  15449272 aaaaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacg 15449215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 18471295 - 18471351
Alignment:
Q  134 gtcgacacaactaataatttgtaaaa--atcacataatacagtgtaattacaagtgt 188  Q
    ||||||||| ||||||||||| ||||  |||||||||| |||| |||||||||||||    
T  18471295 gtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgt 18471351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 22794129 - 22794080
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtc 194  Q
    |||||||||| |||||| ||||||||||||||||||| | |||| |||||    
T  22794129 taataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc 22794080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 23738677 - 23738722
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||| ||||||||||| |||||||||||||| ||||| |||||    
T  23738677 cgacacagctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 25934636 - 25934693
Alignment:
Q  157 aaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||| ||||||||||||||| | |||| ||| ||||||| |||||||||||||    
T  25934636 aaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacga 25934693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 34298435 - 34298480
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    |||||| ||||||||||||  ||||||||||||| |||||||||||    
T  34298435 cgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 5944302 - 5944346
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||    
T  5944302 aaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 5944346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 12443520 - 12443476
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatt 180  Q
    ||||||| |||||||||||  ||||||||||||| ||||||||||    
T  12443520 cgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 19058916 - 19058864
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  ||| || ||||||| ||||||||||||||||||    
T  19058916 cgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgt 19058864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 29144418 - 29144366
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||  | ||||| ||||||||||||||||||    
T  29144418 cgacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgt 29144366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 14529 - 14580
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg 187  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14529 cgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 15657863 - 15657926
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgt 198  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  15657863 cgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgt 15657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 30717582 - 30717512
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||  ||||||||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacga 30717512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 37419752 - 37419820
Alignment:
Q  146 aataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||| |||||||||| ||| |||||||||||||||||  ||||||||||| |||||||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacga 37419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 37558976 - 37559028
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  37558976 cgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgt 37559028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 974746 - 974809
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgt 198  Q
    ||||||||||||||||||| ||| ||||||| || |||||||||||||||||| ||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgt 974809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 36756406 - 36756328
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||||| |||||| ||||||||||  |||||| ||||    
T  36756406 gtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacac 36756328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 11223922 - 11223845
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| |||||| |||| |||||| ||||||| |||||||||||||||||| |||||| |||  |||||||||||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacga 11223845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 19536458 - 19536405
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  19536458 cgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgt 19536405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 12668483 - 12668419
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||||||| |||||| |||||||||||    
T  12668483 cgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 20539736 - 20539672
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtg 197  Q
    ||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||| |||||||||    
T  20539736 gtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 21374759 - 21374707
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  21374759 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 21374707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 23058501 - 23058433
Alignment:
Q  138 acacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgt 204  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||| ||||    
T  23058501 acacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt 23058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 2438778 - 2438727
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| ||||||||||  |||||||||||||| ||||||||||||||||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgt 2438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 12940994 - 12940947
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaa 184  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaa 12940947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 18841072 - 18841021
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| |||||| |||||||  |||||||||||||||||    
T  18841072 gacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgt 18841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 30404901 - 30404858
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 30404858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 26769510 - 26769588
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| ||| ||||||| ||   |||||||||||||||| |||||| |||| || ||||||||||    
T  26769510 cgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacga 26769588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 15972872 - 15972924
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||| |||||||||| |||||| ||| ||| ||||||||||||||||||    
T  15972872 cgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgt 15972924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 18421962 - 18422014
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||| |||||||||  ||| |||||||||| ||||||||||||||||||    
T  18421962 cgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgt 18422014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 20473321 - 20473373
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||  |||| ||| ||||| ||||||||||||||||||    
T  20473321 cgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgt 20473373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 30335416 - 30335464
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaa 184  Q
    ||||||||||||||||||| |||||| |||||||  |||||||||||||    
T  30335416 cgacacaactaataatttgaaaaaatgacataatttagtgtaattacaa 30335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 38117219 - 38117167
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||| | | ||||||||||||||||    
T  38117219 cgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 4882748 - 4882678
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||| ||||| |||||| | ||||| |||||||||||||||||| | ||||||||| ||||| |||||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacga 4882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 39323261 - 39323315
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||  |||||||||||  ||||| ||||||| ||||||||||||||||||    
T  39323261 gtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgt 39323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 28677916 - 28677953
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 24894388 - 24894440
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  |||||||||||||| ||||| ||||| ||||||    
T  24894388 cgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 33153443 - 33153475
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||| ||||||||||||||||||    
T  33153443 aaaaatcacataattcagtgtaattacaagtgt 33153475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 4383365 - 4383470
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga-gggggacacgcctaatcc 231  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||  |||||||||| |||||  ||||||    |||||||||||||||    
T  4383365 gtcgatacaactaataatttg-aaaaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacaccggacacgcctaatcc 4383463  T
Q  232 gaggagt 238  Q
    |||||||    
T  4383464 gaggagt 4383470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 19482667 - 19482745
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| ||| |||||||||| | ||||||||||||||| |||||||||||| || | ||||||||    
T  19482667 cgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacga 19482745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 11596404 - 11596312
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgaggagt 238  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||  |||| |||   |  ||||||||||||||| |||||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcattgtccgac---atcgggacacgcctaatctgaggagt 11596312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 24613763 - 24613683
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||||||||||  ||||||||||||| || ||||| ||||||||| |||||| |||| ||||| |||||||    
T  24613763 gtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacga 24613683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 27706239 - 27706159
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgtg-gtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||| |||||||||  ||||||||||||||  |||||||||||||||||| |||||||||   ||||||||||||    
T  27706239 gtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacga 27706159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 54580082 - 54580031
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgt 54580031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 51701258 - 51701335
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacga 213  Q
    |||||| ||||||||||| |||||| |||||||  |||||||||||||||| | |||||||||| |||||| ||||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacga 51701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 3947826 - 3947774
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||    
T  3947826 cgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgt 3947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 12708146 - 12708245
Alignment:
Q  137 gacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacgagggggacacgcctaatccgag 234  Q
    ||||||||||||||||| |||||| | | ||||| |||||||||||||||||| | |||||||||| ||||||||   |  || ||||||||||||||||    
T  12708146 gacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgtgtctatgtcggac---atcggaacacgcctaatccgag 12708242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 21945502 - 21945554
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  21945502 cgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgt 21945554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 23293046 - 23292994
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| |||| |||||||||||||    
T  23293046 cgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgt 23292994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 28964300 - 28964256
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 28964256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 29205451 - 29205495
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 29205495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 40481640 - 40481687
Alignment:
Q  140 acaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  40481640 acaactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 12797391 - 12797346
Alignment:
Q  142 aactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  12797391 aactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 12797346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 47263983 - 47264033
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaa 184  Q
    ||||||| | |||||||||||||||||||||||||| | ||||||||||||    
T  47263983 gtcgacatagctaataatttgtaaaaatcacataattctgtgtaattacaa 47264033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 11651196 - 11651135
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcg 195  Q
    ||||||||| ||||||||||  |||||||||||||| ||||| || ||||||||| ||||||    
T  11651196 gtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtcg 11651135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 12895168 - 12895112
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||| |||||||||||    
T  12895168 ctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtc 12895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 34306863 - 34306812
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||||||||||    
T  34306863 cgacacaactaataatttg-aaaaatcagataatgtagtgtaattacaagtgt 34306812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 35158045 - 35157993
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||| |||||||||||||| ||||||||||||||  |||||||||| ||||||    
T  35158045 cgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgt 35157993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 38847072 - 38847020
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||| || || ||||||||||||||||||    
T  38847072 cgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgt 38847020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 4157150 - 4157200
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  4157150 gacacaactaataatttg-aaaaatcacataatttagtgcaattacaagtgt 4157200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 6485662 - 6485619
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||| ||||||||||||||  |||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgt 6485619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 30298945 - 30299008
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt-ggtgtcgtg 197  Q
    ||||||| ||||||||||| ||||| | ||||||| |||||||||||||||||| |||||||||    
T  30298945 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 30327813 - 30327876
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt-ggtgtcgtg 197  Q
    ||||||| ||||||||||| ||||| | ||||||| |||||||||||||||||| |||||||||    
T  30327813 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 37203271 - 37203322
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgtggtgtcg 195  Q
    ||||||||||| |||||| |||||||  ||||||||||||||||| ||||||    
T  37203271 ctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtcg 37203322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 16073396 - 16073445
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||||||||    
T  16073396 acacaagtaataatttg-aaaaatcgcataattcagtgtaattacaagtgt 16073445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 30982930 - 30982860
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||| |||||  ||||||||||| | ||||||||||| |||||| ||||||||||| ||||| |||||||    
T  30982930 ctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacga 30982860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 715668 - 715615
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  715668 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 752994 - 752941
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  752994 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  138 acacaactaataatttgtaaaaatcacataatacagtgtaattaca 183  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 49431024 - 49431077
Alignment:
Q  136 cgacacaactaataatttgtaaaa-atcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||| |||||||||| ||||||||||| ||||||    
T  49431024 cgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgt 49431077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 2362035 - 2361983
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||| |||||||  |||||||||| ||||||    
T  2362035 cgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgt 2361983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 12895334 - 12895282
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||| |||||||||| ||||||||||||||   ||||||||| ||||||    
T  12895334 cgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgt 12895282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 42640548 - 42640580
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||| ||||||||||||||||||    
T  42640548 aaaaatcacataattcagtgtaattacaagtgt 42640580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 50280880 - 50280958
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataat--acagtgtaattacaagtg-tggtgtcgtgtctgtgtcggacacg 212  Q
    ||||||| ||||||||||| |||| |||||||||  |  |||||||||||||||  ||||||||||| ||||||||||||    
T  50280880 cgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcgtgtc-gtgtcggacacg 50280958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 20171 - 20223
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  20171 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 20223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 51810 - 51862
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  51810 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 17808 - 17757
Alignment:
Q  137 gacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  17808 gacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgt 17757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 8695 - 8617
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||||||||||||||| ||| |||||||||| | || ||||||||| ||| ||||||||||| || ||||||||||    
T  8695 cgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacga 8617  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 241593 - 241671
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||  ||||| ||||||||||  |||||||||||||    
T  241593 cgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacga 241671  T

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Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 3900 - 3831
Alignment:
Q  145 taataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||  |||||||||||||| ||||||||||||||||||  |||||||||  |||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacga 3831  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 8009 - 8054
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaatta 181  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||    
T  8009 cgacacaactaataatttgaaaaaatcatataatacagtgtaatta 8054  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 178879 - 178826
Alignment:
Q  136 cgacacaactaataatttgtaaaaatca-cataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  178879 cgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgt 178826  T

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Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 19579 - 19626
Alignment:
Q  140 acaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  19579 acaactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0227 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 7371 - 7319
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| ||||||    
T  7371 cgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 13399 - 13448
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaag 185  Q
    |||||||||||||||||||  ||||||||||||| ||||| |||||||||    
T  13399 cgacacaactaataatttgagaaaatcacataattcagtgcaattacaag 13448  T

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Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 21928 - 21879
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaag 185  Q
    |||||||||||||||||||  ||||||||||||| ||||| |||||||||    
T  21928 cgacacaactaataatttgagaaaatcacataattcagtgcaattacaag 21879  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 53189 - 53254
Alignment:
Q  146 aataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggaca 210  Q
    |||||||||  ||||||||||||| ||||||||||| |||||| |||| |||||| ||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggaca 53254  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 514 - 470
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||    
T  514 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 470  T

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Target: scaffold0066 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 33423 - 33375
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaa 184  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||||    
T  33423 cgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 46681 - 46729
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaa 184  Q
    |||||||  |||||||||| |||||||||||||| ||||||||||||||    
T  46681 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaa 46729  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 130481 - 130533
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||  ||||| |||| |||||||||||||| ||||||||||||||||||    
T  130481 cgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgt 130533  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 70274 - 70329
Alignment:
Q  133 tgtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||||  |||||||||| |||||| ||||||| ||||||||||| ||||||    
T  70274 tgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgt 70329  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 23789 - 23832
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgt 198  Q
    |||||||||||||| |||||||||||||||||| ||||||||||    
T  23789 aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 71722 - 71800
Alignment:
Q  136 cgacacaactaataatttgtaaaaa--tcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacac 211  Q
    ||||||| ||||||||||| |||||  ||||| ||| |||||||||||| |||||  |||||||||| |||||||||||    
T  71722 cgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacac 71800  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 7094 - 7040
Alignment:
Q  134 gtcgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||||| ||||||||||| |||||| |||||||  ||| |||||||||||||    
T  7094 gtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 23530 - 23588
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||||| ||||||||||| ||||||  ||||||| || |||||||||||||    
T  23530 aaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacga 23588  T

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Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 23439 - 23483
Alignment:
Q  156 aaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtc 199  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||    
T  23439 aaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 263424 - 263354
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt-ggtgtcgtgtctgtgtcggacacga 213  Q
    |||||||||||  |||| |||||||| ||||||||||| ||||||  |||||||||| ||||| |||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacga 263354  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 4944 - 4891
Alignment:
Q  136 cgacacaactaataatttgtaaaaa-tcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  4944 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 8797 - 8849
Alignment:
Q  136 cgacacaactaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    ||||||| ||||||||||| |||||||| || ||  |||||||||||||||||    
T  8797 cgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgt 8849  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 92814 - 92858
Alignment:
Q  144 ctaataatttgtaaaaatcacataatacagtgtaattacaagtgt 188  Q
    |||||||||||  ||||| ||||||| ||||||||||||||||||    
T  92814 ctaataatttgagaaaattacataattcagtgtaattacaagtgt 92858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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