View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2734_low_24 (Length: 274)
Name: NF2734_low_24
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2734_low_24 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 4066568 - 4066823
Alignment:
| Q |
19 |
ataccgcatctgataaaagaatgtgttacaattcttttctacaagaaatttcattattaaggtgaaagttcacataagtgatgttgaaacaaatatatgt |
118 |
Q |
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| T |
4066568 |
ataccgcatctgataaaagaatgtgttacaattcttttctacaagaaatttcattattaaggtgaaagttcacttaagtgatgttgaaacaaatatatgt |
4066667 |
T |
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| Q |
119 |
ggtataaaagaattgttatcaaagtgcagcttctgtttcaacacatgcaactttatactcattaccagaactagaattaaaatcctctacaaaagatcca |
218 |
Q |
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| T |
4066668 |
ggtataaaagaattgttatcaaagtgcagcttctgtttcaacacatgcaactttatactcattaccagaactagaattaaaatcctctacaaaagatcca |
4066767 |
T |
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| Q |
219 |
agatactaatccacacaaaataccatgtcaaaaatgcttgtaaccttgattttgtg |
274 |
Q |
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|||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
4066768 |
agatactaatccacacaaaagatcatgtcaaaaatgcttgtaaccttgattttgtg |
4066823 |
T |
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