View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2734_low_28 (Length: 204)
Name: NF2734_low_28
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2734_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 32731857 - 32731681
Alignment:
| Q |
17 |
atggtttaataagttattatagttattttaaaatgtattggattctgcttagacaataaactactactggtatttatttactatgggcacgttttaaatt |
116 |
Q |
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| T |
32731857 |
atggtttaataagttattatagttatttaaaaatgtattggattctgcttagacaataaactactactggtatttatttactatgggcacgttttaaatt |
32731758 |
T |
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| Q |
117 |
accataat-ttttgtcttcac--ttttaattaggacagattcattttcttcttcaaagagttgtgaaggtggagcat |
190 |
Q |
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|||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32731757 |
accataattttttgtcttcacttttttagttaggacagattcattttcttcttcaaagagttgtgaaggtggagcat |
32731681 |
T |
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