View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2734_low_3 (Length: 529)

Name: NF2734_low_3
Description: NF2734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2734_low_3
NF2734_low_3
[»] scaffold0026 (2 HSPs)
scaffold0026 (218-514)||(87318-87614)
scaffold0026 (33-153)||(87132-87253)
[»] scaffold0083 (1 HSPs)
scaffold0083 (33-153)||(35040-35160)
[»] chr7 (2 HSPs)
chr7 (33-153)||(41000089-41000209)
chr7 (61-153)||(7843288-7843381)
[»] chr5 (1 HSPs)
chr5 (33-153)||(38936914-38937034)
[»] chr4 (6 HSPs)
chr4 (33-153)||(18280747-18280867)
chr4 (33-153)||(42872460-42872580)
chr4 (75-153)||(9398628-9398706)
chr4 (61-141)||(21377812-21377893)
chr4 (73-151)||(17202176-17202254)
chr4 (285-382)||(53743416-53743513)
[»] chr3 (4 HSPs)
chr3 (33-153)||(2309291-2309411)
chr3 (61-153)||(16022434-16022527)
chr3 (73-153)||(5553798-5553878)
chr3 (73-146)||(2684147-2684220)
[»] chr1 (3 HSPs)
chr1 (39-153)||(6473436-6473550)
chr1 (73-153)||(18801318-18801398)
chr1 (33-109)||(31390488-31390564)
[»] scaffold0146 (1 HSPs)
scaffold0146 (33-153)||(27705-27825)
[»] chr2 (4 HSPs)
chr2 (61-153)||(22299888-22299981)
chr2 (73-111)||(15724929-15724967)
chr2 (73-153)||(45709311-45709391)
chr2 (40-151)||(17330594-17330705)
[»] chr8 (2 HSPs)
chr8 (33-153)||(8366680-8366800)
chr8 (61-116)||(17277722-17277778)
[»] scaffold0094 (1 HSPs)
scaffold0094 (73-152)||(12895-12974)
[»] scaffold0321 (1 HSPs)
scaffold0321 (73-153)||(5828-5908)
[»] scaffold0269 (1 HSPs)
scaffold0269 (61-111)||(1442-1493)
[»] scaffold0062 (1 HSPs)
scaffold0062 (73-111)||(73482-73520)


Alignment Details
Target: scaffold0026 (Bit Score: 285; Significance: 1e-159; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 218 - 514
Target Start/End: Original strand, 87318 - 87614
Alignment:
Q  218 gtccttcatcaacacaatttctgtccttcatcaagggtatcagcataagaaaaatgatacaacaatgcatacctatccaaacgacaaattggaccaatac 317  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87318 gtccttcatcaacacaatttctgttcttcatcaagggtatcagcataagaaaaatgatacaacaatgcatacctatccaaacgacaaattggaccaatac 87417  T
Q  318 tagccttgtgaagagttctcttaatagccgctttccatgcaaatggaaatgaaccacccttataatgaaatatgaataagaaaaatcagcataatagaca 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87418 tagccttgtgaagagttctcttaatagccgctttccatgcaaatggaaatgaaccacccttataatgaaatatgaataagaaaaatcagcataatagaca 87517  T
Q  418 acattcattaatttaacaaagtttttccagagttataaactcttacccaaccaaaacacctagacaggtcatttcctgtaccaagtggtatgattcc 514  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87518 acattcattaatttaacacagtttttctagagttataaactcttacccaaccaaaacacctagacaggtcatttcctgtaccaagtggtatgattcc 87614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 87132 - 87253
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    |||| |||||||| | |||||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87132 tttgtctctttttcggttctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 87231  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    ||||||||||||||||||||||    
T  87232 ggattggaagggaatgtgacgc 87253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 35160 - 35040
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 35062  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  35061 ggattggaagtgaatgtgacgc 35040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 41000209 - 41000089
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41000209 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 41000111  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  41000110 ggattggaagtgaatgtgacgc 41000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 7843288 - 7843381
Alignment:
Q  61 ccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  7843288 ccaagtttatcgaatcttatcaatggcttccttaccattctggcgattcctcaaggcttagcattccttcttgaattggaagtgaatgtgacgc 7843381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 38937034 - 38936914
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38937034 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 38936936  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  38936935 ggattggaagtgaatgtgacgc 38936914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 18280867 - 18280747
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18280867 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 18280769  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  18280768 ggattggaagtgaatgtgacgc 18280747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 42872580 - 42872460
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42872580 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttatcattccttctt 42872482  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  42872481 ggattggaagtgaatgtgacgc 42872460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 9398706 - 9398628
Alignment:
Q  75 cttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  9398706 cttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagtgaatgtaacgc 9398628  T

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Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 21377812 - 21377893
Alignment:
Q  61 ccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaag 141  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  21377812 ccaagtttatcgaatcttatcaatggctttcttaccattgtggcgattcttcatggcttaacattccttcttggattggaag 21377893  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 17202176 - 17202254
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgac 151  Q
    |||||||||||| |||||||| ||||||| |||||||||  |||||||||||  || | ||||| |||| |||||||||    
T  17202176 atcttatcaatgacttccttatcattgtgacgattcctcttggcttagcattttttataggattagaagtgaatgtgac 17202254  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 382
Target Start/End: Original strand, 53743416 - 53743513
Alignment:
Q  285 catacctatccaaacgacaaattggaccaatactagccttgtgaagagttctcttaatagccgctttccatgcaaatggaaatgaaccacccttataa 382  Q
    ||||||||||||| |||  || ||  |||| ||||||||| ||||||||||| || || || |  ||||| ||||| |||||||||||||||| ||||    
T  53743416 catacctatccaaccgatgaactgacccaacactagccttttgaagagttcttttgattgctgacttccaagcaaaaggaaatgaaccaccctgataa 53743513  T

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Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 2309411 - 2309291
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2309411 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 2309313  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  2309312 ggattggaagtgaatgtgacgc 2309291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 16022527 - 16022434
Alignment:
Q  61 ccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16022527 ccaagtttatcgaatcttatcaatggcttccttaccattgtggtgattcctcaaggcttagcattccttcttggattggaagtgaatgtgacgc 16022434  T

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Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 5553878 - 5553798
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||| || ||||||||    
T  5553878 atcttatcaatgtcttccttaccattgtggcgattcctcctggcttagcattccatcttggattagaagtgagtgtgacgc 5553798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 2684147 - 2684220
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaat 146  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||| |||||||| ||||||| |||| ||||    
T  2684147 atcttatcaatgacttccttaccattgtgacgattcctcatggcttaacattcctttttggattagaagtgaat 2684220  T

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Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 6473436 - 6473550
Alignment:
Q  39 tctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattg 137  Q
    ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6473436 tctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattg 6473534  T
Q  138 gaagggaatgtgacgc 153  Q
    |||| |||||||||||    
T  6473535 gaagtgaatgtgacgc 6473550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 18801398 - 18801318
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    |||||||||||  ||||||||||||||||||||||| |||  ||||||||||||||||||||||| ||| || ||||||||    
T  18801398 atcttatcaataacttccttaccattgtggcgattcttcatagcttagcattccttcttggattgaaagtgagtgtgacgc 18801318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 31390488 - 31390564
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcc 109  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  31390488 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcc 31390564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 27705 - 27825
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27705 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 27803  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||| ||| |||||||||||    
T  27804 ggattgaaagtgaatgtgacgc 27825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 22299981 - 22299888
Alignment:
Q  61 ccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22299981 ccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagtgaatgtgacgc 22299888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 15724967 - 15724929
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctc 111  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15724967 atcttatcaatgacttccttaccattgtggcgattcctc 15724929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 45709311 - 45709391
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    |||||||||||| |||  ||||| |||||||||||| ||   ||||| |||||||| |||||||||||| || ||||||||    
T  45709311 atcttatcaatgactttgttacccttgtggcgattcttcgtagcttaacattccttattggattggaagtgagtgtgacgc 45709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 17330594 - 17330705
Alignment:
Q  40 ctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattgg 138  Q
    |||||||||| |||| | || ||||||||| ||| |||||| |||| |||||||| | ||||||  |||| | | ||||||| |||||| ||||||||||    
T  17330594 ctttttggtt-ctggattgaaccaagtttatcgaatcttattaatgacttccttatctttgtggatattctttatggcttagtattcctgcttggattgg 17330692  T
Q  139 aagggaatgtgac 151  Q
    ||| || ||||||    
T  17330693 aagtgagtgtgac 17330705  T

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Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 8366680 - 8366800
Alignment:
Q  33 tttgcctctttttggtttctggttggacccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttctt 131  Q
    ||||| ||||||||||| |||| | || ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  8366680 tttgcttctttttggtt-ctggattgaaccaagtttatcgaatcttatcaatggcttccttaccattgtggcaattcctcaaagcttagcattccttctt 8366778  T
Q  132 ggattggaagggaatgtgacgc 153  Q
    |||||||||| |||||||||||    
T  8366779 ggattggaagtgaatgtgacgc 8366800  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 17277778 - 17277722
Alignment:
Q  61 ccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctcaaggc 116  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  17277778 ccaagtttatcgaatcttatcaatggattccttaccattgtggcgattcctcaaggc 17277722  T

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Target: scaffold0094 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 12974 - 12895
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacg 152  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| |||||||| || |||||||    
T  12974 atcttatcaatggcttccttaccattgtggcgattcctcctgacttagcattccttcttgaattggaagtgagtgtgacg 12895  T

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Target: scaffold0321 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 5828 - 5908
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctcaaggcttagcattccttcttggattggaagggaatgtgacgc 153  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||| |||| || ||||||||    
T  5828 atcttatcaatggcttccttaccattgttgcgattcctcctggcttagcattcctttttggattagaagtgagtgtgacgc 5908  T

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Target: scaffold0269 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 1493 - 1442
Alignment:
Q  61 ccaagtttaccga-tcttatcaatggcttccttaccattgtggcgattcctc 111  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  1493 ccaagtttatcgaatcttatcaatggcttccttaccattgtggcgattcctc 1442  T

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Target: scaffold0062 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 73520 - 73482
Alignment:
Q  73 atcttatcaatggcttccttaccattgtggcgattcctc 111  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  73520 atcttatcaatgacttccttaccattgtggcgattcctc 73482  T

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