View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2736_high_47 (Length: 237)

Name: NF2736_high_47
Description: NF2736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2736_high_47
NF2736_high_47
[»] chr4 (9 HSPs)
chr4 (9-212)||(24544007-24544211)
chr4 (132-179)||(715546-715593)
chr4 (132-179)||(752872-752919)
chr4 (132-167)||(12895215-12895250)
chr4 (132-167)||(29205551-29205586)
chr4 (132-181)||(19482748-19482797)
chr4 (132-181)||(23292927-23292976)
chr4 (129-181)||(3947699-3947751)
chr4 (133-181)||(22440559-22440607)
[»] chr1 (6 HSPs)
chr1 (132-200)||(2218276-2218346)
chr1 (132-200)||(46940749-46940815)
chr1 (135-200)||(48040418-48040483)
chr1 (132-167)||(9630562-9630597)
chr1 (132-181)||(19562557-19562605)
chr1 (132-168)||(22947812-22947848)
[»] chr3 (5 HSPs)
chr3 (133-183)||(25775574-25775624)
chr3 (132-181)||(40052381-40052430)
chr3 (132-181)||(25074864-25074913)
chr3 (132-168)||(4990913-4990949)
chr3 (132-180)||(34185053-34185101)
[»] scaffold0793 (1 HSPs)
scaffold0793 (132-179)||(4822-4869)
[»] chr7 (5 HSPs)
chr7 (145-213)||(18215151-18215221)
chr7 (132-167)||(24339736-24339771)
chr7 (132-167)||(32093955-32093990)
chr7 (132-166)||(20549875-20549909)
chr7 (132-181)||(5409772-5409821)
[»] chr5 (2 HSPs)
chr5 (132-183)||(2436978-2437029)
chr5 (132-168)||(22423765-22423801)
[»] chr2 (5 HSPs)
chr2 (132-167)||(10535686-10535721)
chr2 (132-181)||(26769591-26769640)
chr2 (132-181)||(37419823-37419872)
chr2 (132-181)||(42511323-42511372)
chr2 (132-180)||(15909571-15909619)
[»] chr6 (4 HSPs)
chr6 (132-181)||(17327591-17327640)
chr6 (130-167)||(17341620-17341657)
chr6 (132-181)||(28152167-28152216)
chr6 (132-180)||(9107300-9107348)
[»] scaffold0004 (1 HSPs)
scaffold0004 (132-168)||(92904-92940)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 212
Target Start/End: Complemental strand, 24544211 - 24544007
Alignment:
Q  9 gagatgaaacaatatttttgtttcatattgttcaaaattaacagtagtnnnnnnnnnnnnngctaaactaaatggaataagtgtaatgatcatctaagat 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||    
T  24544211 gagaagaaacaatatttttgtttcatattgttcaaaattaacagtagtaaaaaaataaaaagctaaactaaatggaataagtgtaatgatcatctaagat 24544112  T
Q  109 agatccattagaatatacagtattatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg-accgacacttgtaattacaatgcatt 207  Q
    || ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  24544111 aggtccattagaatataccgtattatgaagcatgagcactcctcggattaggcatgtccatgtgtcggacacgcaccgacacttgtaattacaatgcatt 24544012  T
Q  208 aagtg 212  Q
    |||||    
T  24544011 aagtg 24544007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 715546 - 715593
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggaca 179  Q
    |||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  715546 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 752872 - 752919
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggaca 179  Q
    |||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  752872 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 12895215 - 12895250
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    |||||||||||| |||||||||||||||||||||||    
T  12895215 tatgaagcacgaacactcctcggattaggcgtgtcc 12895250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 29205586 - 29205551
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    |||||||||||| |||||||||||||||||||||||    
T  29205586 tatgaagcacgaacactcctcggattaggcgtgtcc 29205551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 19482797 - 19482748
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||| |||||||||||||||| ||||||  || |||||||||    
T  19482797 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 19482748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 23292927 - 23292976
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||  |||||||||||||||||||||||  || |||||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 23292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 3947699 - 3947751
Alignment:
Q  129 tattatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    ||||||||||||||  |||||||||||||||| ||||||  || |||||||||    
T  3947699 tattatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacg 3947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 22440559 - 22440607
Alignment:
Q  133 atgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    ||||||||||  |||||||||||||||||||||||  || |||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacg 22440607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 2218346 - 2218276
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg--accgacacttgtaattaca 200  Q
    |||||||||||  |||||||| ||||||||||||||  || |||||||||  |||||||||||||||||||    
T  2218346 tatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacgacaccgacacttgtaattaca 2218276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 46940749 - 46940815
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacgaccgacacttgtaattaca 200  Q
    |||||||||||| ||||||||||||||||||||| |  || |||||||||  ||| |||||||||||||    
T  46940749 tatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacg--cgaaacttgtaattaca 46940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 48040418 - 48040483
Alignment:
Q  135 gaagcacgagcactcctcggattaggcgtgtccatgtatcggacacgaccgacacttgtaattaca 200  Q
    ||||||||  ||||||||  |||||||||||||  || |||||||||||||||||||||| |||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacacgaccgacacttgtatttaca 48040483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 9630562 - 9630597
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    |||||||||||| |||||||||||||||||||||||    
T  9630562 tatgaagcacgaacactcctcggattaggcgtgtcc 9630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 19562557 - 19562605
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||| |||||||||||||||| |||||| ||| |||||||||    
T  19562557 tatgaagcacga-cactcctcggattaggtgtgtccctgtgtcggacacg 19562605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 22947848 - 22947812
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcca 168  Q
    |||||||||||  ||||||||||||||||||||||||    
T  22947848 tatgaagcacggacactcctcggattaggcgtgtcca 22947812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 25775624 - 25775574
Alignment:
Q  133 atgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacgac 183  Q
    ||||||||||| |||||||||||||||||||||||  || |||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacgac 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 40052430 - 40052381
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||| |||||||||||||||||||||||  || |||||||||    
T  40052430 tatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacg 40052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 25074913 - 25074864
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||| |||||||||||||||| ||||||  || |||||||||    
T  25074913 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 25074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 4990913 - 4990949
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcca 168  Q
    |||||||||||  ||||||||||||||||||||||||    
T  4990913 tatgaagcacggacactcctcggattaggcgtgtcca 4990949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 34185053 - 34185101
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacac 180  Q
    |||||||||||  |||||||||||||||||||||||  || ||||||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 4822 - 4869
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggaca 179  Q
    |||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  4822 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 18215151 - 18215221
Alignment:
Q  145 cactcctcggattaggcgtgtccatgtatcggacacg--accgacacttgtaattacaatgcattaagtga 213  Q
    |||||||| ||||||||||||||  || |||||||||  |||||||||||||| |||| ||||||| ||||    
T  18215151 cactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtga 18215221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 24339771 - 24339736
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    ||||||||||| ||||||||||||||||||||||||    
T  24339771 tatgaagcacgggcactcctcggattaggcgtgtcc 24339736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 32093955 - 32093990
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    |||||||||||| |||||||||||||||||||||||    
T  32093955 tatgaagcacgaacactcctcggattaggcgtgtcc 32093990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 20549909 - 20549875
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtc 166  Q
    ||||||||||| |||||||||||||||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtc 20549875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 5409772 - 5409821
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||  |||||||||||||||||||||||  || |||||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 5409821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 2437029 - 2436978
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacgac 183  Q
    |||||||||||| ||||||||||||||||||||||   || |||||||||||    
T  2437029 tatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacgac 2436978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 22423765 - 22423801
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcca 168  Q
    |||||||||||  ||||||||||||||||||||||||    
T  22423765 tatgaagcacggacactcctcggattaggcgtgtcca 22423801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 10535686 - 10535721
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    |||||||||||| |||||||||||||||||||||||    
T  10535686 tatgaagcacgaacactcctcggattaggcgtgtcc 10535721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 26769640 - 26769591
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||  |||||||||||||||||||||||  || |||||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacg 26769591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 37419872 - 37419823
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||  |||||||||||||||||||||||  || |||||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 37419823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 42511323 - 42511372
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||  ||||||||||||||| ||||||| ||| |||||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacg 42511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 15909571 - 15909619
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacac 180  Q
    |||||||||||| ||||| ||| ||||||||||||| ||| ||||||||    
T  15909571 tatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.00000008; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 17327591 - 17327640
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||  ||||||||||||||||||||||| ||| || ||||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacg 17327640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 17341620 - 17341657
Alignment:
Q  130 attatgaagcacgagcactcctcggattaggcgtgtcc 167  Q
    |||||||||||| | |||||||||||||||||||||||    
T  17341620 attatgaagcacaaacactcctcggattaggcgtgtcc 17341657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 28152216 - 28152167
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacacg 181  Q
    |||||||||||| ||||||||||||||||| |||||  || |||||||||    
T  28152216 tatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacg 28152167  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 9107300 - 9107348
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtccatgtatcggacac 180  Q
    ||||||||||| ||||||||||||||||| ||||||  || ||||||||    
T  9107300 tatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 92940 - 92904
Alignment:
Q  132 tatgaagcacgagcactcctcggattaggcgtgtcca 168  Q
    |||||||||||  ||||||||||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtcca 92904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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