View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2736_low_14 (Length: 429)

Name: NF2736_low_14
Description: NF2736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2736_low_14
NF2736_low_14
[»] chr5 (24 HSPs)
chr5 (4-187)||(3263212-3263395)
chr5 (261-334)||(3263601-3263674)
chr5 (380-429)||(15305216-15305265)
chr5 (379-429)||(16983257-16983307)
chr5 (380-429)||(12807081-12807130)
chr5 (380-429)||(25773649-25773698)
chr5 (380-429)||(30720720-30720769)
chr5 (380-428)||(36561328-36561376)
chr5 (377-429)||(37900852-37900904)
chr5 (378-421)||(15304820-15304863)
chr5 (379-429)||(10285285-10285335)
chr5 (377-418)||(30720489-30720530)
chr5 (380-429)||(40886838-40886887)
chr5 (379-418)||(12806852-12806891)
chr5 (380-418)||(36561099-36561137)
chr5 (380-418)||(40886610-40886648)
chr5 (348-381)||(3263675-3263708)
chr5 (379-408)||(8086264-8086293)
chr5 (379-408)||(9502626-9502655)
chr5 (376-405)||(18094318-18094347)
chr5 (380-408)||(978077-978105)
chr5 (380-408)||(978311-978339)
chr5 (380-408)||(14634157-14634185)
chr5 (380-408)||(33387453-33387481)
[»] chr8 (36 HSPs)
chr8 (377-429)||(41307965-41308017)
chr8 (378-429)||(8697902-8697953)
chr8 (371-429)||(40918957-40919015)
chr8 (380-429)||(27034997-27035046)
chr8 (380-429)||(45278705-45278754)
chr8 (379-429)||(10646591-10646641)
chr8 (380-429)||(3585451-3585500)
chr8 (380-429)||(40486457-40486506)
chr8 (380-429)||(43275625-43275674)
chr8 (379-429)||(2540159-2540209)
chr8 (379-429)||(11646553-11646603)
chr8 (379-429)||(40058531-40058581)
chr8 (379-421)||(41305761-41305803)
chr8 (380-429)||(7146913-7146962)
chr8 (380-429)||(11174451-11174500)
chr8 (374-418)||(36068319-36068363)
chr8 (380-424)||(37345571-37345615)
chr8 (380-422)||(36068080-36068122)
chr8 (379-421)||(45278012-45278053)
chr8 (379-418)||(11646324-11646363)
chr8 (379-418)||(30999523-30999562)
chr8 (377-408)||(40494618-40494649)
chr8 (379-418)||(43275398-43275437)
chr8 (380-418)||(7147152-7147190)
chr8 (387-429)||(30999749-30999791)
chr8 (380-418)||(40058303-40058341)
chr8 (380-418)||(40918731-40918769)
chr8 (379-408)||(616782-616811)
chr8 (379-408)||(617017-617046)
chr8 (379-408)||(623175-623204)
chr8 (379-408)||(623410-623439)
chr8 (379-408)||(42587482-42587511)
chr8 (380-408)||(132017-132045)
chr8 (380-412)||(5878317-5878349)
chr8 (380-408)||(14237514-14237542)
chr8 (380-424)||(20546520-20546564)
[»] chr6 (29 HSPs)
chr6 (373-429)||(17942436-17942492)
chr6 (379-425)||(15064926-15064972)
chr6 (376-421)||(19996318-19996363)
chr6 (378-429)||(1605577-1605628)
chr6 (378-429)||(7761299-7761350)
chr6 (378-429)||(29260190-29260241)
chr6 (379-429)||(19996719-19996769)
chr6 (380-429)||(4129435-4129484)
chr6 (380-429)||(8626482-8626531)
chr6 (386-429)||(30734836-30734879)
chr6 (379-421)||(13757207-13757249)
chr6 (387-429)||(30734711-30734753)
chr6 (379-418)||(1605817-1605856)
chr6 (379-418)||(8626721-8626760)
chr6 (377-408)||(18668922-18668953)
chr6 (377-408)||(20437014-20437045)
chr6 (377-408)||(24623938-24623969)
chr6 (380-418)||(7761539-7761577)
chr6 (376-418)||(17942682-17942724)
chr6 (378-408)||(19087956-19087986)
chr6 (378-408)||(19088192-19088222)
chr6 (380-418)||(29260431-29260469)
chr6 (379-408)||(4147930-4147959)
chr6 (379-408)||(18668687-18668716)
chr6 (379-408)||(32414913-32414942)
chr6 (379-408)||(32420754-32420783)
chr6 (379-408)||(32671815-32671844)
chr6 (380-408)||(22055006-22055034)
chr6 (380-408)||(25476042-25476070)
[»] chr3 (36 HSPs)
chr3 (378-429)||(12094580-12094631)
chr3 (379-429)||(29375137-29375187)
chr3 (371-429)||(36881273-36881331)
chr3 (380-429)||(38805245-38805294)
chr3 (374-429)||(19911503-19911558)
chr3 (379-421)||(19912174-19912216)
chr3 (379-421)||(38806341-38806383)
chr3 (379-429)||(44277459-44277509)
chr3 (376-429)||(13364839-13364892)
chr3 (380-429)||(27707392-27707441)
chr3 (380-424)||(198855-198899)
chr3 (378-429)||(43750135-43750186)
chr3 (379-429)||(3383075-3383125)
chr3 (379-429)||(19241896-19241946)
chr3 (380-421)||(12095423-12095464)
chr3 (380-421)||(44276775-44276816)
chr3 (380-424)||(46694343-46694387)
chr3 (375-418)||(19241663-19241706)
chr3 (387-429)||(32835184-32835226)
chr3 (377-423)||(48963153-48963199)
chr3 (377-418)||(29375371-29375412)
chr3 (377-408)||(27010471-27010502)
chr3 (379-418)||(36881519-36881558)
chr3 (380-418)||(13365082-13365120)
chr3 (380-418)||(46694110-46694148)
chr3 (379-408)||(27010708-27010737)
chr3 (379-408)||(42490430-42490459)
chr3 (380-408)||(6910568-6910596)
chr3 (380-408)||(13499569-13499597)
chr3 (380-408)||(19823900-19823928)
chr3 (380-408)||(20765430-20765458)
chr3 (377-405)||(21005290-21005318)
chr3 (377-405)||(27334728-27334756)
chr3 (377-405)||(39866138-39866166)
chr3 (380-408)||(42761483-42761511)
chr3 (380-408)||(42761717-42761745)
[»] chr1 (37 HSPs)
chr1 (378-429)||(3943058-3943109)
chr1 (379-429)||(9588669-9588719)
chr1 (379-421)||(41959809-41959851)
chr1 (380-429)||(284333-284382)
chr1 (380-421)||(3943763-3943804)
chr1 (380-429)||(13984995-13985044)
chr1 (380-429)||(23045507-23045556)
chr1 (380-429)||(41959078-41959127)
chr1 (381-429)||(27211192-27211240)
chr1 (379-421)||(9589631-9589673)
chr1 (379-429)||(40783885-40783935)
chr1 (379-421)||(44227847-44227889)
chr1 (387-429)||(46771644-46771686)
chr1 (380-429)||(321626-321675)
chr1 (380-429)||(24772133-24772182)
chr1 (377-429)||(44228232-44228284)
chr1 (373-408)||(11641060-11641095)
chr1 (377-428)||(23526237-23526288)
chr1 (374-408)||(40772006-40772040)
chr1 (380-422)||(47038085-47038127)
chr1 (376-408)||(36757482-36757514)
chr1 (376-408)||(40771768-40771800)
chr1 (379-418)||(284572-284611)
chr1 (379-418)||(24771905-24771944)
chr1 (379-418)||(40783656-40783695)
chr1 (380-418)||(321865-321903)
chr1 (380-418)||(23045279-23045317)
chr1 (379-408)||(6402644-6402673)
chr1 (379-412)||(10845480-10845513)
chr1 (379-408)||(30701717-30701746)
chr1 (379-408)||(36399332-36399361)
chr1 (380-421)||(51064992-51065033)
chr1 (395-424)||(52037353-52037382)
chr1 (377-405)||(6766369-6766397)
chr1 (380-408)||(16120674-16120702)
chr1 (376-412)||(23526484-23526520)
chr1 (380-408)||(52024260-52024288)
[»] chr7 (27 HSPs)
chr7 (379-429)||(25060137-25060187)
chr7 (378-429)||(2911552-2911603)
chr7 (378-429)||(10981506-10981557)
chr7 (379-429)||(27813810-27813860)
chr7 (382-429)||(36453352-36453399)
chr7 (380-429)||(25614579-25614628)
chr7 (380-429)||(40348960-40349009)
chr7 (380-429)||(47110451-47110500)
chr7 (377-421)||(2910856-2910900)
chr7 (386-421)||(25059456-25059491)
chr7 (377-418)||(27814050-27814091)
chr7 (378-418)||(40349200-40349240)
chr7 (379-408)||(16778504-16778533)
chr7 (379-408)||(25566547-25566576)
chr7 (379-408)||(28061514-28061543)
chr7 (379-408)||(28061749-28061778)
chr7 (379-408)||(38852081-38852110)
chr7 (379-408)||(41897987-41898016)
chr7 (379-408)||(41898222-41898251)
chr7 (379-408)||(47156261-47156290)
chr7 (380-408)||(20885103-20885131)
chr7 (380-408)||(36623308-36623336)
chr7 (380-408)||(36623542-36623570)
chr7 (380-408)||(42877386-42877414)
chr7 (380-408)||(46103370-46103398)
chr7 (380-408)||(46103597-46103625)
chr7 (380-408)||(47156027-47156055)
[»] chr4 (39 HSPs)
chr4 (379-429)||(40122713-40122763)
chr4 (379-429)||(12071560-12071610)
chr4 (379-429)||(14261043-14261093)
chr4 (379-429)||(21310424-21310474)
chr4 (379-429)||(21661763-21661813)
chr4 (379-429)||(21670527-21670577)
chr4 (379-429)||(25704650-25704700)
chr4 (380-429)||(34324811-34324860)
chr4 (373-429)||(22321495-22321551)
chr4 (379-429)||(24706475-24706525)
chr4 (382-429)||(31892240-31892287)
chr4 (387-421)||(19362189-19362223)
chr4 (379-429)||(44568836-44568886)
chr4 (377-418)||(21310660-21310701)
chr4 (374-418)||(21661529-21661573)
chr4 (374-418)||(21670293-21670337)
chr4 (379-418)||(14261283-14261322)
chr4 (379-418)||(24706246-24706285)
chr4 (379-418)||(25704890-25704929)
chr4 (379-418)||(44569076-44569115)
chr4 (377-408)||(47386520-47386551)
chr4 (380-418)||(12071799-12071837)
chr4 (395-429)||(19361662-19361696)
chr4 (380-422)||(20249247-20249289)
chr4 (379-408)||(26170221-26170250)
chr4 (379-408)||(35381128-35381157)
chr4 (379-408)||(38416884-38416913)
chr4 (387-424)||(50767871-50767908)
chr4 (380-408)||(2760730-2760758)
chr4 (380-408)||(2760961-2760989)
chr4 (380-408)||(4467520-4467548)
chr4 (380-408)||(19433358-19433386)
chr4 (380-408)||(26169986-26170014)
chr4 (380-408)||(29830343-29830371)
chr4 (380-408)||(38416650-38416678)
chr4 (380-408)||(44232077-44232105)
chr4 (380-408)||(45292066-45292094)
chr4 (380-408)||(55209574-55209602)
chr4 (380-408)||(55209808-55209836)
[»] scaffold0257 (2 HSPs)
scaffold0257 (380-429)||(23467-23516)
scaffold0257 (380-421)||(23872-23913)
[»] chr2 (21 HSPs)
chr2 (380-429)||(1102503-1102552)
chr2 (380-429)||(34224382-34224431)
chr2 (379-429)||(3518907-3518957)
chr2 (379-429)||(12969967-12970017)
chr2 (376-429)||(23366785-23366838)
chr2 (380-429)||(37673965-37674014)
chr2 (380-429)||(39938170-39938219)
chr2 (377-418)||(22388135-22388176)
chr2 (379-418)||(23367028-23367067)
chr2 (380-418)||(1646526-1646564)
chr2 (379-408)||(2183191-2183220)
chr2 (373-418)||(3519146-3519191)
chr2 (379-408)||(5405230-5405259)
chr2 (379-408)||(7608283-7608312)
chr2 (379-408)||(19141065-19141094)
chr2 (379-408)||(19141300-19141329)
chr2 (380-421)||(34222058-34222099)
chr2 (379-408)||(39358145-39358174)
chr2 (380-408)||(8042256-8042284)
chr2 (380-408)||(11841593-11841621)
chr2 (380-408)||(44365391-44365419)
[»] scaffold1431 (1 HSPs)
scaffold1431 (374-429)||(127-182)
[»] scaffold1770 (1 HSPs)
scaffold1770 (380-429)||(170-219)
[»] scaffold0054 (2 HSPs)
scaffold0054 (379-424)||(45453-45498)
scaffold0054 (380-418)||(45692-45730)
[»] scaffold0022 (2 HSPs)
scaffold0022 (380-408)||(100647-100675)
scaffold0022 (377-405)||(100884-100912)


Alignment Details
Target: chr5 (Bit Score: 160; Significance: 4e-85; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 3263212 - 3263395
Alignment:
Q  4 tcctatctttgtacctttgttcttcctgaatgattcaacttgtcacccaagattgaatcaattctatcttcattttatttcgtatccctttttagagtaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  3263212 tcctatctttgtacctttgttcttcctgaatgattcaacttgtcacccaagattgaatcagttctatcttgattttatttcgtatacctttttagagtaa 3263311  T
Q  104 aattttgtttgcacttgtaagtgtctcacactaacatgacacatgtcattacattcaattacttctatcatctcaaattagtat 187  Q
     |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3263312 cattttgtttgcacttgtaagtgtctcacactaccatgacacatgtcgttacattcaattacttctatcatctcaaattagtat 3263395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 3263601 - 3263674
Alignment:
Q  261 tctggtgttcatgcttcataaatccatgaagaagagagaagaatacaacataatgaaaactagattataaatac 334  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3263601 tctggtgttcgtgcttcataaatccatgaagaagggagaagaatacaacataatgaaaactagattataaatac 3263674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 15305265 - 15305216
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15305265 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 16983257 - 16983307
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16983257 atactccctctgtttcaaaatacatgtccattttggagaaattgcagtaac 16983307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 12807130 - 12807081
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12807130 tactccctccgtttcaaaatacatgtccattttggagaaattgcattaac 12807081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 25773649 - 25773698
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25773649 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 25773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 30720769 - 30720720
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  30720769 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 30720720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 36561376 - 36561328
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaa 428  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  36561376 tactccatccgtttcaaaatacatgtccattttagaaaaattgcagtaa 36561328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 37900904 - 37900852
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  37900904 atatactccctccgtttcaaaatacacatccattttggagaaattgcagtaac 37900852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 15304820 - 15304863
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  15304820 tatactccctccgttttaaaatacatgtccattttagagaaatt 15304863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 10285335 - 10285285
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||| ||||    
T  10285335 atactccctccgtttcaaaatagatgtctattttggagaaattgcattaac 10285285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 30720489 - 30720530
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  30720489 atatactccctccgtttcataatacttgtccattttagagaa 30720530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 40886887 - 40886838
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||| ||||    
T  40886887 tactccatccgtttcaaaatacatgttcattttggagaaattgcactaac 40886838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 12806852 - 12806891
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  12806852 atactccctccgtttcataatacttgtccattttagagaa 12806891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 36561099 - 36561137
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  36561099 tactccctccgtttcataatacttgtccattttagagaa 36561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 40886610 - 40886648
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40886610 tactccctccgtttcataatacttgtccattttagagaa 40886648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 381
Target Start/End: Original strand, 3263675 - 3263708
Alignment:
Q  348 aaaaactaaataccagccttaacactaatatata 381  Q
    ||||||||||||||||| ||||||||||||||||    
T  3263675 aaaaactaaataccagctttaacactaatatata 3263708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 8086293 - 8086264
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  8086293 atactccctccgtttcaaaatacatgtcca 8086264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 9502626 - 9502655
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  9502626 atactccctccgtttcaaaatacatgtcca 9502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 405
Target Start/End: Complemental strand, 18094347 - 18094318
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgt 405  Q
    ||||||||||||||||||||||||||||||    
T  18094347 tatatactccctccgtttcaaaatacatgt 18094318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 978077 - 978105
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtcca 978105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 978339 - 978311
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  978339 tactccctccgtttcaaaatacatgtcca 978311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 14634157 - 14634185
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  14634157 tactccctccgtttcaaaatacatgtcca 14634185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 33387481 - 33387453
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  33387481 tactccctccgtttcaaaatacatgtcca 33387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 41308017 - 41307965
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41308017 atatactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 41307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 8697953 - 8697902
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8697953 tatactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 8697902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 40919015 - 40918957
Alignment:
Q  371 actaatatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  40919015 actaagatatactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 40918957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 27034997 - 27035046
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27034997 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 27035046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 45278754 - 45278705
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45278754 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 45278705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 10646591 - 10646641
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  10646591 atacttcctccgtttcaaaatacatgtccattttggagaaattgcagtaac 10646641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 3585451 - 3585500
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3585451 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 3585500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 40486506 - 40486457
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40486506 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaac 40486457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 43275674 - 43275625
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  43275674 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 43275625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 2540209 - 2540159
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  2540209 atacttcctccgtttcaaaatacatgtccattttggagaaattgcactaac 2540159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 11646603 - 11646553
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  11646603 atactcccttcgtttcaaaatacatgtccattttggagaaattgcactaac 11646553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 40058581 - 40058531
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  40058581 atactccctccgtttcaaaatacatgtccatttcggagaaattgcactaac 40058531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 41305761 - 41305803
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  41305761 atactctctccgtttcaaaatacatgtccattttagagaaatt 41305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 7146913 - 7146962
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  7146913 tactccttccgtttcaaaatacatgtccattttgaagaaattgcagtaac 7146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 11174500 - 11174451
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  11174500 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 11174451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 418
Target Start/End: Complemental strand, 36068363 - 36068319
Alignment:
Q  374 aatatatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  36068363 aatatatactccctccgtttcataatacttgtccattttagagaa 36068319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 37345571 - 37345615
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgca 424  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  37345571 tactccctccgtttcaaaatacatgtccattttgaagaaattgca 37345615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 36068080 - 36068122
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattg 422  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  36068080 tactccctccgtttcaaaatacatgtccattttggaggaattg 36068122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 45278012 - 45278053
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  45278012 atactccctc-gtttcaaaatacatgtccattttagagaaatt 45278053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 11646324 - 11646363
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  11646324 atactccctccgtttcataatacttgtccattttagagaa 11646363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 30999523 - 30999562
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  30999523 atactccctccgtttcataatacttgtccattttagagaa 30999562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 408
Target Start/End: Complemental strand, 40494649 - 40494618
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||    
T  40494649 atatactccctccgtttcaaaatacatgtcca 40494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 43275398 - 43275437
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  43275398 atactccctccgtttcataatacttgtccattttagagaa 43275437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 7147190 - 7147152
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  7147190 tactccctccgtttcataatacttgtccattttagagaa 7147152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 30999791 - 30999749
Alignment:
Q  387 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaac 30999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 40058303 - 40058341
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40058303 tactccctccgtttcataatacttgtccattttagagaa 40058341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 40918731 - 40918769
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40918731 tactccctccgtttcataatacttgtccattttagagaa 40918769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 616782 - 616811
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  616782 atactccctccgtttcaaaatacatgtcca 616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 617046 - 617017
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  617046 atactccctccgtttcaaaatacatgtcca 617017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 623175 - 623204
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  623175 atactccctccgtttcaaaatacatgtcca 623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 623439 - 623410
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  623439 atactccctccgtttcaaaatacatgtcca 623410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 42587511 - 42587482
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  42587511 atactccctccgtttcaaaatacatgtcca 42587482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 132017 - 132045
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtcca 132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 5878317 - 5878349
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccatttt 412  Q
    ||||||||||||||| |||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtccatttt 5878349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 14237542 - 14237514
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  14237542 tactccctccgtttcaaaatacatgtcca 14237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 20546564 - 20546520
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgca 424  Q
    |||||||||| |||||||||| |||||||||||  ||||||||||    
T  20546564 tactccctccatttcaaaatatatgtccattttgaagaaattgca 20546520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 17942436 - 17942492
Alignment:
Q  373 taatatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17942436 taatatatactcccttcgtttcaaaatacatgtccatttttgagaaattgcagtaac 17942492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 425
Target Start/End: Complemental strand, 15064972 - 15064926
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcag 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15064972 atactccctccgtttcaaaatacatgtccattttagagaaattgcag 15064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 19996318 - 19996363
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19996318 tatatactccctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 1605577 - 1605628
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1605577 tatactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 1605628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 7761299 - 7761350
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7761299 tatactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 7761350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 29260190 - 29260241
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  29260190 tatactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 29260241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 19996769 - 19996719
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19996769 atactccctccgtttcaaaatacatgtctattttggagaaattgcagtaac 19996719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 4129435 - 4129484
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  4129435 tactccctccgtttcaaaatacatatccactttggagaaattgcagtaac 4129484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 8626482 - 8626531
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  8626482 tactccctccgtttcaaaatacatgtccattttgaagaaattgcattaac 8626531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 429
Target Start/End: Complemental strand, 30734879 - 30734836
Alignment:
Q  386 ctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  30734879 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaac 30734836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 13757207 - 13757249
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  13757207 atactctctccgtttcaaaatacatgtccattttggagaaatt 13757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 30734753 - 30734711
Alignment:
Q  387 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaac 30734711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 1605856 - 1605817
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  1605856 atactccctccgtttcataatacttgtccattttagagaa 1605817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 8626760 - 8626721
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  8626760 atactccctccgtttcataatacttgtccattttagagaa 8626721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 408
Target Start/End: Complemental strand, 18668953 - 18668922
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||    
T  18668953 atatactccctccgtttcaaaatacatgtcca 18668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 408
Target Start/End: Original strand, 20437014 - 20437045
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||    
T  20437014 atatactccctccgtttcaaaatacatgtcca 20437045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 408
Target Start/End: Original strand, 24623938 - 24623969
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||    
T  24623938 atatactccctccgtttcaaaatacatgtcca 24623969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 7761577 - 7761539
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  7761577 tactccctccgtttcataatacttgtccattttagagaa 7761539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 17942724 - 17942682
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||||||| ||||| |||||||||| |||||    
T  17942724 tatatactccctccgtttcataatacttgtccattttggagaa 17942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Original strand, 19087956 - 19087986
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||||    
T  19087956 tatactccctccgtttcaaaatacatgtcca 19087986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Complemental strand, 19088222 - 19088192
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||||    
T  19088222 tatactccctccgtttcaaaatacatgtcca 19088192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 29260469 - 29260431
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  29260469 tactccctccgtttcataatacttgtccattttagagaa 29260431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 4147930 - 4147959
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  4147930 atactccctccgtttcaaaatacatgtcca 4147959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 18668687 - 18668716
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  18668687 atactccctccgtttcaaaatacatgtcca 18668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 32414942 - 32414913
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  32414942 atactccctccgtttcaaaatacatgtcca 32414913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 32420783 - 32420754
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  32420783 atactccctccgtttcaaaatacatgtcca 32420754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 32671815 - 32671844
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  32671815 atactccctccgtttcaaaatacatgtcca 32671844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 22055034 - 22055006
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  22055034 tactccctccgtttcaaaatacatgtcca 22055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 25476070 - 25476042
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  25476070 tactccctccgtttcaaaatacatgtcca 25476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 12094580 - 12094631
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12094580 tatactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 12094631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 29375137 - 29375187
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29375137 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 29375187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 36881273 - 36881331
Alignment:
Q  371 actaatatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  36881273 actaatatttactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 36881331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 38805245 - 38805294
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38805245 tactccctccgttttaaaatacatgtccattttagagaaattgcagtaac 38805294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 19911503 - 19911558
Alignment:
Q  374 aatatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  19911503 aatatttactccctccgtttcaaaatacatgttcattttggagaaattgcagtaac 19911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 19912216 - 19912174
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19912216 atactccctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 38806383 - 38806341
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38806383 atactccctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 44277509 - 44277459
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  44277509 atactccctccgtttcaaaatacatgtctattttggagaaattgcagtaac 44277459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 13364839 - 13364892
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  13364839 tatatactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 13364892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 27707441 - 27707392
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  27707441 tactccctccgtttcgaaatacatgtccattttggagaaattgcagtaac 27707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 198855 - 198899
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgca 424  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  198855 tactccctccgtttcaaaatacatgtccattttggagaaattgca 198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 43750135 - 43750186
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  43750135 tatactcccttcgtttcaaaatacatgtccattttggagaaattggagtaac 43750186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 3383075 - 3383125
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  3383075 atactccttccgtttcaaaatatatgtccattttggagaaattgcagtaac 3383125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 19241946 - 19241896
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  19241946 atactccctccgtttcaaaatacatgtccattttggtgaaattgcactaac 19241896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 12095464 - 12095423
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  12095464 tactccctccgtttcaaaatatatgtccattttagagaaatt 12095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 44276775 - 44276816
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  44276775 tactctctccgtttcaaaatacatgtccattttagagaaatt 44276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 46694387 - 46694343
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgca 424  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  46694387 tactccctccgtttcaaaatacatgtcctttttggagaaattgca 46694343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 418
Target Start/End: Original strand, 19241663 - 19241706
Alignment:
Q  375 atatatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||    
T  19241663 atatatactccctccgtttcataatacttgtccattttagagaa 19241706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 32835226 - 32835184
Alignment:
Q  387 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  32835226 tccgtttcaaaatacatgtccattttggagaaattgcaataac 32835184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 48963153 - 48963199
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaaattgc 423  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||||    
T  48963153 atatactccctccgtttcaaaatacatatctattttggagaaattgc 48963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 29375412 - 29375371
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  29375412 atatactccctccgtttcataatacttgtccattttagagaa 29375371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 408
Target Start/End: Original strand, 27010471 - 27010502
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||    
T  27010471 atatactccctccgtttcaaaatacatgtcca 27010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 36881558 - 36881519
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  36881558 atactccctccgtttcataatacttgtccattttagagaa 36881519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 13365120 - 13365082
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  13365120 tactccctccgtttcataatacttgtccattttagagaa 13365082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 46694110 - 46694148
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  46694110 tactccctccgtttcataatacttgtccattttagagaa 46694148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 27010737 - 27010708
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  27010737 atactccctccgtttcaaaatacatgtcca 27010708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 42490459 - 42490430
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  42490459 atactccctccgtttcaaaatacatgtcca 42490430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 6910596 - 6910568
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  6910596 tactccctccgtttcaaaatacatgtcca 6910568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 13499597 - 13499569
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtcca 13499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 19823900 - 19823928
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  19823900 tactccctccgtttcaaaatacatgtcca 19823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 20765458 - 20765430
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  20765458 tactccctccgtttcaaaatacatgtcca 20765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Original strand, 21005290 - 21005318
Alignment:
Q  377 atatactccctccgtttcaaaatacatgt 405  Q
    |||||||||||||||||||||||||||||    
T  21005290 atatactccctccgtttcaaaatacatgt 21005318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Original strand, 27334728 - 27334756
Alignment:
Q  377 atatactccctccgtttcaaaatacatgt 405  Q
    |||||||||||||||||||||||||||||    
T  27334728 atatactccctccgtttcaaaatacatgt 27334756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Original strand, 39866138 - 39866166
Alignment:
Q  377 atatactccctccgtttcaaaatacatgt 405  Q
    |||||||||||||||||||||||||||||    
T  39866138 atatactccctccgtttcaaaatacatgt 39866166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 42761483 - 42761511
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  42761483 tactccctccgtttcaaaatacatgtcca 42761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 42761745 - 42761717
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtcca 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 3943058 - 3943109
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3943058 tatactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 3943109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 9588669 - 9588719
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9588669 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 9588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 41959851 - 41959809
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41959851 atactccctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 284333 - 284382
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  284333 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 284382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 3943804 - 3943763
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 13985044 - 13984995
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13985044 tactccatccgtttcaaaatacatgtccattttggagaaattgcagtaac 13984995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 23045556 - 23045507
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23045556 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 23045507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 41959078 - 41959127
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  41959078 tactccctccgtttcaaaatacatgtccattttggagaaattgcaataac 41959127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 27211240 - 27211192
Alignment:
Q  381 actccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27211240 actccctccgtttcaaaatacatgtccattttggagaaattgcaataac 27211192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 9589673 - 9589631
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  9589673 atactccctccgtttcaaaatacatgtctattttagagaaatt 9589631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 40783935 - 40783885
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  40783935 atactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 40783885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 44227847 - 44227889
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  44227847 atactccctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 46771644 - 46771686
Alignment:
Q  387 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  46771644 tccgtttcaaaatacatgtccattttggagaaattgcagtaac 46771686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 321626 - 321675
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  321626 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 321675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 24772182 - 24772133
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  24772182 tactccctccgtttcaaaatacatgtccattttgaagaaattgcactaac 24772133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 44228284 - 44228232
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||| |||||    
T  44228284 atatactacctccatttcaaaatacatgtccattttggagaaattgctgtaac 44228232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 408
Target Start/End: Original strand, 11641060 - 11641095
Alignment:
Q  373 taatatatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||||||    
T  11641060 taatatatactccctccgtttcaaaatacatgtcca 11641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 23526237 - 23526288
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaa 428  Q
    ||||||||| ||| ||||||||||||||| |||||| |||||||||||||||    
T  23526237 atatactccttccatttcaaaatacatgttcattttggagaaattgcagtaa 23526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 408
Target Start/End: Complemental strand, 40772040 - 40772006
Alignment:
Q  374 aatatatactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||||||||    
T  40772040 aatatatactccctccgtttcaaaatacatgtcca 40772006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 47038127 - 47038085
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattg 422  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  47038127 tactccatccgtttcaaaatacatgtccattttggagaaattg 47038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 408
Target Start/End: Original strand, 36757482 - 36757514
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||||||    
T  36757482 tatatactccctccgtttcaaaatacatgtcca 36757514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 408
Target Start/End: Original strand, 40771768 - 40771800
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||||||    
T  40771768 tatatactccctccgtttcaaaatacatgtcca 40771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 284611 - 284572
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  284611 atactccctccgtttcataatacttgtccattttagagaa 284572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 24771905 - 24771944
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  24771905 atactccctccgtttcataatacttgtccattttagagaa 24771944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 40783656 - 40783695
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  40783656 atactccctccgtttcataatacttgtccattttagagaa 40783695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 321903 - 321865
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  321903 tactccctccgtttcataatacttgtccattttagagaa 321865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 23045279 - 23045317
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  23045279 tactccctccgtttcataatacttgtccattttagagaa 23045317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 6402673 - 6402644
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  6402673 atactccctccgtttcaaaatacatgtcca 6402644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 412
Target Start/End: Original strand, 10845480 - 10845513
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccatttt 412  Q
    |||||| |||||||||||||||||||||||||||    
T  10845480 atactcactccgtttcaaaatacatgtccatttt 10845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 30701717 - 30701746
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  30701717 atactccctccgtttcaaaatacatgtcca 30701746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 36399361 - 36399332
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  36399361 atactccctccgtttcaaaatacatgtcca 36399332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 51065033 - 51064992
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  51065033 tactccctccgtttcacaatacttgtccattttaaagaaatt 51064992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 424
Target Start/End: Complemental strand, 52037382 - 52037353
Alignment:
Q  395 aaaatacatgtccattttagagaaattgca 424  Q
    ||||||||||||||||||||||||||||||    
T  52037382 aaaatacatgtccattttagagaaattgca 52037353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Original strand, 6766369 - 6766397
Alignment:
Q  377 atatactccctccgtttcaaaatacatgt 405  Q
    |||||||||||||||||||||||||||||    
T  6766369 atatactccctccgtttcaaaatacatgt 6766397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 16120702 - 16120674
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  16120702 tactccctccgtttcaaaatacatgtcca 16120674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 412
Target Start/End: Complemental strand, 23526520 - 23526484
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtccatttt 412  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  23526520 tatatactccctccgtttcataatacttgtccatttt 23526484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 52024288 - 52024260
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  52024288 tactccctccgtttcaaaatacatgtcca 52024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 25060187 - 25060137
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25060187 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 25060137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 2911603 - 2911552
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2911603 tatactccctccatttcaaaatacatgtccattttggagaaattgcagtaac 2911552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 10981506 - 10981557
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  10981506 tatactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 10981557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 27813810 - 27813860
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27813810 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 27813860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 36453399 - 36453352
Alignment:
Q  382 ctccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  36453399 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaac 36453352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 25614628 - 25614579
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  25614628 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaac 25614579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 40348960 - 40349009
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  40348960 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaac 40349009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 47110451 - 47110500
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  47110451 tactccctccatttcaaaatacatgtccattttggagaaattgcactaac 47110500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 2910856 - 2910900
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  2910856 atatactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 421
Target Start/End: Original strand, 25059456 - 25059491
Alignment:
Q  386 ctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    ||||||||||||||||||||||||||||||||||||    
T  25059456 ctccgtttcaaaatacatgtccattttagagaaatt 25059491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 27814091 - 27814050
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  27814091 atatactccctccgtttcataatacttgtccattttagagaa 27814050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 40349240 - 40349200
Alignment:
Q  378 tatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  40349240 tatactccctccgtttcataatacttgtccattttagagaa 40349200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 16778504 - 16778533
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  16778504 atactccctccgtttcaaaatacatgtcca 16778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 25566547 - 25566576
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  25566547 atactccctccgtttcaaaatacatgtcca 25566576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 28061514 - 28061543
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  28061514 atactccctccgtttcaaaatacatgtcca 28061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 28061778 - 28061749
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  28061778 atactccctccgtttcaaaatacatgtcca 28061749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 38852110 - 38852081
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  38852110 atactccctccgtttcaaaatacatgtcca 38852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 41897987 - 41898016
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  41897987 atactccctccgtttcaaaatacatgtcca 41898016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 41898251 - 41898222
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  41898251 atactccctccgtttcaaaatacatgtcca 41898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 47156290 - 47156261
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  47156290 atactccctccgtttcaaaatacatgtcca 47156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 20885103 - 20885131
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtcca 20885131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 36623308 - 36623336
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtcca 36623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 36623570 - 36623542
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  36623570 tactccctccgtttcaaaatacatgtcca 36623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 42877386 - 42877414
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  42877386 tactccctccgtttcaaaatacatgtcca 42877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 46103370 - 46103398
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  46103370 tactccctccgtttcaaaatacatgtcca 46103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 46103625 - 46103597
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtcca 46103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 47156027 - 47156055
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  47156027 tactccctccgtttcaaaatacatgtcca 47156055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 40122763 - 40122713
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40122763 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 40122713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 12071560 - 12071610
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12071560 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 12071610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 14261043 - 14261093
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14261043 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 14261093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 21310424 - 21310474
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  21310424 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 21310474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 21661813 - 21661763
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21661813 atactccctccctttcaaaatacatgtccattttggagaaattgcagtaac 21661763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 21670577 - 21670527
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21670577 atactccctccctttcaaaatacatgtccattttggagaaattgcagtaac 21670527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 25704650 - 25704700
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25704650 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 25704700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 34324860 - 34324811
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  34324860 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 34324811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 22321551 - 22321495
Alignment:
Q  373 taatatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  22321551 taatagatactccttccgtttcaaaatacatgtccattttggagaaattgcactaac 22321495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 24706525 - 24706475
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  24706525 atactccatccgtttcaaaatacatgtccattttggagaaattgcactaac 24706475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 31892240 - 31892287
Alignment:
Q  382 ctccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  31892240 ctccctccgtatcaaaatacatgttcattttaaagaaattgcagtaac 31892287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 421
Target Start/End: Complemental strand, 19362223 - 19362189
Alignment:
Q  387 tccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||||||||||||||||||||||||||||||||    
T  19362223 tccgtttcaaaatacatgtccattttagagaaatt 19362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 44568836 - 44568886
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||| ||||    
T  44568836 atactccttccgtttcaaaatacatgtccattttgaagaaattgcactaac 44568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 21310701 - 21310660
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  21310701 atatactccctccgtttcataatacttgtccattttagagaa 21310660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 21661529 - 21661573
Alignment:
Q  374 aatatatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||    
T  21661529 aatatatgctccctccgtttcataatacttgtccattttagagaa 21661573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 21670293 - 21670337
Alignment:
Q  374 aatatatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||    
T  21670293 aatatatgctccctccgtttcataatacttgtccattttagagaa 21670337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 14261322 - 14261283
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  14261322 atactccctccgtttcataatacttgtccattttagagaa 14261283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 24706246 - 24706285
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  24706246 atactccctccgtttcataatacttgtccattttagagaa 24706285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 25704929 - 25704890
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  25704929 atactccctccgtttcataatacttgtccattttagagaa 25704890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 44569115 - 44569076
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  44569115 atactccctccgtttcataatacttgtccattttagagaa 44569076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 408
Target Start/End: Complemental strand, 47386551 - 47386520
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||||    
T  47386551 atatactccctccgtttcaaaatacatgtcca 47386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 12071837 - 12071799
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  12071837 tactccctccgtttcataatacttgtccattttagagaa 12071799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 19361662 - 19361696
Alignment:
Q  395 aaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||| ||||||||||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaac 19361696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 20249289 - 20249247
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattg 422  Q
    ||||| ||||||||||||||||||||||||||| || ||||||    
T  20249289 tactctctccgtttcaaaatacatgtccattttggataaattg 20249247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 26170250 - 26170221
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  26170250 atactccctccgtttcaaaatacatgtcca 26170221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 35381157 - 35381128
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  35381157 atactccctccgtttcaaaatacatgtcca 35381128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 38416913 - 38416884
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  38416913 atactccctccgtttcaaaatacatgtcca 38416884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 424
Target Start/End: Original strand, 50767871 - 50767908
Alignment:
Q  387 tccgtttcaaaatacatgtccattttagagaaattgca 424  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  50767871 tccgtttcaaaatacatattcattttagagaaattgca 50767908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 2760730 - 2760758
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  2760730 tactccctccgtttcaaaatacatgtcca 2760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 2760989 - 2760961
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtcca 2760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 4467520 - 4467548
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  4467520 tactccctccgtttcaaaatacatgtcca 4467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 19433358 - 19433386
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  19433358 tactccctccgtttcaaaatacatgtcca 19433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 26169986 - 26170014
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtcca 26170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 29830343 - 29830371
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtcca 29830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 38416650 - 38416678
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  38416650 tactccctccgtttcaaaatacatgtcca 38416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 44232077 - 44232105
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  44232077 tactccctccgtttcaaaatacatgtcca 44232105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 45292094 - 45292066
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  45292094 tactccctccgtttcaaaatacatgtcca 45292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 55209574 - 55209602
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  55209574 tactccctccgtttcaaaatacatgtcca 55209602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 55209836 - 55209808
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtcca 55209808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 23467 - 23516
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23467 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 23516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 23913 - 23872
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  23913 tactccatccgtttcaaaatacatgtccattttagagaaatt 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 1102503 - 1102552
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 1102552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 34224431 - 34224382
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34224431 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 34224382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 3518907 - 3518957
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3518907 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 3518957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 12970017 - 12969967
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12970017 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 12969967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 23366785 - 23366838
Alignment:
Q  376 tatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23366785 tataaactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 23366838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 37674014 - 37673965
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  37674014 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 37673965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 39938170 - 39938219
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  39938170 tactccctccgtttcaaaatacatgaccattttggagaaattgcactaac 39938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 22388135 - 22388176
Alignment:
Q  377 atatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  22388135 atatactccctccgtttcataatacttgtccattttagagaa 22388176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 23367067 - 23367028
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  23367067 atactccctccgtttcataatacttgtccattttagagaa 23367028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 1646564 - 1646526
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  1646564 tactccctccgtttcataatacctgtccattttagagaa 1646526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 2183220 - 2183191
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  2183220 atactccctccgtttcaaaatacatgtcca 2183191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 3519191 - 3519146
Alignment:
Q  373 taatatatactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    ||||| ||||| ||||||||||| ||||| ||||||||||||||||    
T  3519191 taataaatacttcctccgtttcataatacttgtccattttagagaa 3519146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 5405259 - 5405230
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  5405259 atactccctccgtttcaaaatacatgtcca 5405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 7608312 - 7608283
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  7608312 atactccctccgtttcaaaatacatgtcca 7608283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 19141065 - 19141094
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  19141065 atactccctccgtttcaaaatacatgtcca 19141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 19141329 - 19141300
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  19141329 atactccctccgtttcaaaatacatgtcca 19141300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 34222058 - 34222099
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaatt 421  Q
    |||||| ||||||| ||||||||||||||||||| |||||||    
T  34222058 tactccttccgttttaaaatacatgtccattttatagaaatt 34222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 39358145 - 39358174
Alignment:
Q  379 atactccctccgtttcaaaatacatgtcca 408  Q
    ||||||||||||||||||||||||||||||    
T  39358145 atactccctccgtttcaaaatacatgtcca 39358174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 8042284 - 8042256
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtcca 8042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 11841593 - 11841621
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  11841593 tactccctccgtttcaaaatacatgtcca 11841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 44365419 - 44365391
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  44365419 tactccctccgtttcaaaatacatgtcca 44365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 429
Target Start/End: Complemental strand, 182 - 127
Alignment:
Q  374 aatatatactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  182 aatatatactctctccgtttcaaaatacatgtccattttggagaaattgcactaac 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 170 - 219
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 429  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  170 tactccctccgtttcaaaatacatatccactttggagaaattgcagtaac 219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 45453 - 45498
Alignment:
Q  379 atactccctccgtttcaaaatacatgtccattttagagaaattgca 424  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  45453 atactccctccgtttcaaaatacatgttcattttggagaaattgca 45498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 45730 - 45692
Alignment:
Q  380 tactccctccgtttcaaaatacatgtccattttagagaa 418  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  45730 tactccctccgtttcataatacttgtccattttagagaa 45692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 100647 - 100675
Alignment:
Q  380 tactccctccgtttcaaaatacatgtcca 408  Q
    |||||||||||||||||||||||||||||    
T  100647 tactccctccgtttcaaaatacatgtcca 100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Complemental strand, 100912 - 100884
Alignment:
Q  377 atatactccctccgtttcaaaatacatgt 405  Q
    |||||||||||||||||||||||||||||    
T  100912 atatactccctccgtttcaaaatacatgt 100884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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