View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2736_low_33 (Length: 292)
Name: NF2736_low_33
Description: NF2736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2736_low_33 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 86 - 292
Target Start/End: Complemental strand, 4738076 - 4737868
Alignment:
| Q |
86 |
taccttatatatttgtgaactctatgtttccaattttagttgatgttgcgtaaattatcacaatttttaaaggcgaacctagaaagaaaataaaaacaat |
185 |
Q |
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| T |
4738076 |
taccttatatatttgtgaactctatgtttccaattttagttgatgttgcgtaaattatcacaatttttaaaggcgaacctagaaagaaaataaaaacaat |
4737977 |
T |
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| Q |
186 |
aaaatggtcatctaaacttatagaaactcttgtatcttaaatttgtctttcaaaacacataaaatttg--atagacattccataaagaaacataggaaaa |
283 |
Q |
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| T |
4737976 |
aaaatggtcatctaaacttatagaaactcttgtatcttaaatttgtctttcaaaacacataaaatttgatatagacattccataaagaaacataggaaaa |
4737877 |
T |
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| Q |
284 |
gacatccaa |
292 |
Q |
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| T |
4737876 |
gacatccaa |
4737868 |
T |
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