View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2736_low_55 (Length: 207)

Name: NF2736_low_55
Description: NF2736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2736_low_55
NF2736_low_55
[»] chr2 (49 HSPs)
chr2 (1-106)||(11841722-11841827)
chr2 (1-106)||(5405024-5405129)
chr2 (1-106)||(7608077-7608182)
chr2 (1-106)||(8042151-8042256)
chr2 (1-106)||(19141195-19141300)
chr2 (1-106)||(39358174-39358279)
chr2 (1-106)||(44365185-44365290)
chr2 (1-106)||(6223094-6223199)
chr2 (1-106)||(2183089-2183191)
chr2 (2-104)||(7799876-7799978)
chr2 (1-103)||(36072202-36072304)
chr2 (1-106)||(33607404-33607505)
chr2 (18-105)||(13125275-13125362)
chr2 (1-83)||(19262708-19262790)
chr2 (8-102)||(44644905-44644999)
chr2 (1-106)||(36719453-36719553)
chr2 (10-102)||(32774628-32774720)
chr2 (29-105)||(9172276-9172352)
chr2 (4-100)||(11931722-11931818)
chr2 (5-105)||(22839057-22839157)
chr2 (29-103)||(24252016-24252089)
chr2 (29-103)||(38292008-38292082)
chr2 (2-99)||(16865083-16865180)
chr2 (4-80)||(9006939-9007015)
chr2 (29-105)||(9553851-9553926)
chr2 (11-102)||(13117457-13117548)
chr2 (4-55)||(13598472-13598523)
chr2 (12-103)||(31610785-31610876)
chr2 (3-100)||(24093671-24093768)
chr2 (36-105)||(38839136-38839205)
chr2 (167-207)||(44365351-44365391)
chr2 (10-89)||(42133789-42133868)
chr2 (4-83)||(43444692-43444771)
chr2 (167-207)||(11841621-11841661)
chr2 (169-207)||(5405192-5405230)
chr2 (169-207)||(7608245-7608283)
chr2 (169-207)||(19141094-19141132)
chr2 (3-105)||(19165913-19166014)
chr2 (14-103)||(44563130-44563219)
chr2 (64-103)||(24259493-24259532)
chr2 (30-88)||(31904027-31904085)
chr2 (169-207)||(36072370-36072408)
chr2 (4-89)||(36177723-36177809)
chr2 (170-207)||(13125173-13125210)
chr2 (18-103)||(13442979-13443063)
chr2 (32-105)||(14372207-14372280)
chr2 (29-101)||(2831762-2831834)
chr2 (46-86)||(3837268-3837308)
chr2 (167-207)||(39358329-39358369)
[»] chr8 (47 HSPs)
chr8 (1-106)||(42587377-42587482)
chr8 (1-106)||(616811-616916)
chr8 (1-106)||(623204-623309)
chr8 (1-106)||(14237308-14237413)
chr8 (1-106)||(18044453-18044558)
chr8 (1-106)||(32998478-32998583)
chr8 (1-106)||(41263838-41263943)
chr8 (1-106)||(13216850-13216955)
chr8 (1-106)||(40494412-40494517)
chr8 (1-105)||(2766178-2766282)
chr8 (1-106)||(3100624-3100729)
chr8 (3-106)||(132047-132150)
chr8 (1-106)||(22489402-22489508)
chr8 (1-106)||(36641987-36642093)
chr8 (1-106)||(4270221-4270326)
chr8 (2-103)||(5878345-5878446)
chr8 (1-106)||(35403544-35403649)
chr8 (1-106)||(38957198-38957303)
chr8 (1-106)||(8394374-8394479)
chr8 (1-106)||(11637810-11637915)
chr8 (2-105)||(6414095-6414198)
chr8 (4-75)||(24524131-24524202)
chr8 (2-79)||(36167105-36167182)
chr8 (1-105)||(18090357-18090460)
chr8 (3-106)||(3370385-3370488)
chr8 (4-105)||(5173282-5173384)
chr8 (9-103)||(33700205-33700299)
chr8 (43-105)||(38497142-38497204)
chr8 (36-105)||(18035163-18035232)
chr8 (10-105)||(40204852-40204947)
chr8 (46-103)||(40716655-40716712)
chr8 (41-105)||(9632223-9632287)
chr8 (59-103)||(32855594-32855638)
chr8 (54-106)||(38958890-38958942)
chr8 (35-105)||(18020928-18021001)
chr8 (169-207)||(36641886-36641924)
chr8 (169-207)||(40494580-40494618)
chr8 (167-207)||(18044619-18044659)
chr8 (167-207)||(41264004-41264044)
chr8 (26-105)||(1580817-1580896)
chr8 (64-103)||(21109818-21109857)
chr8 (169-207)||(623372-623410)
chr8 (1-37)||(13217219-13217255)
chr8 (167-207)||(14237474-14237514)
chr8 (167-199)||(32998643-32998675)
chr8 (46-98)||(33905465-33905517)
chr8 (167-207)||(42587276-42587316)
[»] chr6 (53 HSPs)
chr6 (1-106)||(20226427-20226532)
chr6 (1-106)||(22120411-22120516)
chr6 (1-106)||(22054800-22054905)
chr6 (1-104)||(24624072-24624175)
chr6 (1-103)||(17213916-17214018)
chr6 (1-106)||(4147959-4148064)
chr6 (1-106)||(6563254-6563359)
chr6 (1-106)||(18668817-18668922)
chr6 (1-106)||(19088087-19088192)
chr6 (1-106)||(32414808-32414913)
chr6 (3-106)||(1040854-1040957)
chr6 (1-106)||(3989393-3989497)
chr6 (1-106)||(15383059-15383164)
chr6 (1-102)||(17257784-17257885)
chr6 (1-106)||(32671844-32671949)
chr6 (1-106)||(21540758-21540863)
chr6 (1-105)||(10520496-10520600)
chr6 (1-106)||(24955525-24955630)
chr6 (1-106)||(20437142-20437248)
chr6 (1-106)||(25475942-25476042)
chr6 (4-98)||(28477784-28477878)
chr6 (2-105)||(4440879-4440982)
chr6 (18-105)||(12226020-12226107)
chr6 (4-98)||(29790237-29790331)
chr6 (1-83)||(31569178-31569260)
chr6 (4-93)||(15337519-15337608)
chr6 (4-105)||(29693914-29694015)
chr6 (10-102)||(2360027-2360119)
chr6 (10-105)||(10298703-10298798)
chr6 (29-103)||(23158041-23158115)
chr6 (167-207)||(22054966-22055006)
chr6 (37-100)||(8101664-8101727)
chr6 (4-83)||(19240744-19240823)
chr6 (31-89)||(3623856-3623913)
chr6 (10-92)||(17155186-17155268)
chr6 (31-89)||(31869766-31869824)
chr6 (46-98)||(5495322-5495374)
chr6 (64-103)||(16193014-16193053)
chr6 (169-207)||(24623969-24624007)
chr6 (169-207)||(32414707-32414745)
chr6 (170-207)||(4148128-4148165)
chr6 (26-105)||(18992033-18992112)
chr6 (33-83)||(1260490-1260540)
chr6 (169-207)||(6563422-6563460)
chr6 (169-207)||(19087986-19088024)
chr6 (19-105)||(25435541-25435627)
chr6 (10-83)||(14214065-14214138)
chr6 (167-207)||(18668716-18668756)
chr6 (167-207)||(20226326-20226366)
chr6 (167-207)||(20437045-20437085)
chr6 (167-207)||(21540657-21540697)
chr6 (167-207)||(22120310-22120350)
chr6 (29-92)||(26567287-26567351)
[»] chr5 (52 HSPs)
chr5 (1-106)||(9502756-9502861)
chr5 (1-106)||(978105-978210)
chr5 (1-106)||(33387248-33387353)
chr5 (1-106)||(8086159-8086264)
chr5 (1-106)||(14634286-14634391)
chr5 (3-106)||(7224195-7224298)
chr5 (1-103)||(33587601-33587703)
chr5 (4-106)||(40156229-40156331)
chr5 (1-106)||(3472406-3472511)
chr5 (4-106)||(11251145-11251247)
chr5 (1-106)||(18094210-18094315)
chr5 (1-106)||(30355003-30355108)
chr5 (1-104)||(11785856-11785960)
chr5 (1-106)||(27109717-27109821)
chr5 (4-103)||(24992270-24992369)
chr5 (26-106)||(12447547-12447625)
chr5 (43-105)||(9050706-9050768)
chr5 (3-83)||(34111992-34112072)
chr5 (32-103)||(11761125-11761196)
chr5 (2-89)||(39776659-39776746)
chr5 (12-106)||(12007761-12007855)
chr5 (2-105)||(38916380-38916483)
chr5 (4-103)||(24916378-24916479)
chr5 (4-102)||(12456773-12456871)
chr5 (31-105)||(18998745-18998819)
chr5 (4-105)||(6996012-6996112)
chr5 (46-103)||(32400400-32400457)
chr5 (11-90)||(32017251-32017330)
chr5 (2-83)||(20692543-20692622)
chr5 (46-102)||(3422343-3422399)
chr5 (27-103)||(27579562-27579638)
chr5 (46-105)||(12359951-12360010)
chr5 (9-105)||(35641804-35641900)
chr5 (30-97)||(26387017-26387084)
chr5 (169-207)||(978273-978311)
chr5 (169-207)||(9502655-9502693)
chr5 (169-207)||(14634185-14634223)
chr5 (29-103)||(31197822-31197896)
chr5 (169-207)||(33387415-33387453)
chr5 (9-71)||(36240095-36240157)
chr5 (2-100)||(7607733-7607827)
chr5 (30-75)||(37495667-37495712)
chr5 (167-207)||(11251308-11251348)
chr5 (26-105)||(5212974-5213053)
chr5 (4-39)||(10696821-10696856)
chr5 (168-207)||(12446895-12446934)
chr5 (26-105)||(32002066-32002145)
chr5 (167-205)||(7224359-7224397)
chr5 (173-207)||(8086059-8086093)
chr5 (29-89)||(5947697-5947757)
chr5 (167-207)||(27109882-27109922)
chr5 (46-98)||(43090932-43090984)
[»] chr4 (80 HSPs)
chr4 (1-106)||(12240307-12240412)
chr4 (1-106)||(25296709-25296814)
chr4 (1-106)||(26170014-26170119)
chr4 (1-106)||(44232206-44232311)
chr4 (1-105)||(12625279-12625383)
chr4 (1-106)||(31010242-31010347)
chr4 (1-106)||(38416779-38416884)
chr4 (1-106)||(43967751-43967856)
chr4 (1-106)||(55191852-55191957)
chr4 (3-106)||(47386415-47386518)
chr4 (1-106)||(17446762-17446867)
chr4 (1-106)||(29830371-29830476)
chr4 (1-106)||(35381023-35381128)
chr4 (1-106)||(54330819-54330924)
chr4 (1-106)||(55209703-55209808)
chr4 (3-106)||(45291862-45291965)
chr4 (1-106)||(17610308-17610413)
chr4 (1-106)||(26125736-26125841)
chr4 (3-106)||(50205773-50205876)
chr4 (1-106)||(38716915-38717022)
chr4 (1-106)||(25918231-25918336)
chr4 (1-93)||(35686401-35686493)
chr4 (1-105)||(19433488-19433596)
chr4 (1-80)||(55800862-55800941)
chr4 (9-105)||(3037016-3037112)
chr4 (10-106)||(4467648-4467744)
chr4 (1-106)||(2760859-2760961)
chr4 (1-100)||(19595733-19595832)
chr4 (1-104)||(50620813-50620916)
chr4 (4-106)||(9029578-9029680)
chr4 (2-105)||(27407747-27407852)
chr4 (2-98)||(36523105-36523201)
chr4 (29-103)||(14144589-14144663)
chr4 (5-106)||(30446330-30446430)
chr4 (2-103)||(39307725-39307826)
chr4 (27-97)||(7614669-7614739)
chr4 (4-106)||(37767087-37767189)
chr4 (10-103)||(20875379-20875472)
chr4 (29-103)||(50181116-50181190)
chr4 (1-90)||(54610890-54610980)
chr4 (2-103)||(56297834-56297935)
chr4 (2-105)||(38721366-38721469)
chr4 (31-105)||(19903780-19903854)
chr4 (2-84)||(25101749-25101831)
chr4 (31-105)||(55091317-55091391)
chr4 (10-103)||(2571014-2571107)
chr4 (2-105)||(5428607-5428708)
chr4 (2-89)||(34316550-34316636)
chr4 (4-105)||(32871489-32871590)
chr4 (29-83)||(29051740-29051792)
chr4 (16-103)||(29585977-29586063)
chr4 (2-71)||(23360207-23360273)
chr4 (46-100)||(27344083-27344137)
chr4 (2-105)||(27755748-27755855)
chr4 (46-100)||(34323144-34323198)
chr4 (169-207)||(38416678-38416716)
chr4 (169-207)||(43967919-43967957)
chr4 (170-207)||(9029477-9029514)
chr4 (167-207)||(17610474-17610514)
chr4 (167-207)||(19433386-19433426)
chr4 (2-74)||(34652208-34652280)
chr4 (167-207)||(35686601-35686641)
chr4 (30-93)||(50685339-50685403)
chr4 (29-89)||(53304481-53304541)
chr4 (26-105)||(7738871-7738950)
chr4 (26-105)||(46212402-46212481)
chr4 (169-207)||(2760758-2760796)
chr4 (4-105)||(10550455-10550555)
chr4 (59-93)||(34652158-34652192)
chr4 (169-207)||(44232105-44232143)
chr4 (169-207)||(45292028-45292066)
chr4 (169-207)||(55209602-55209640)
chr4 (32-105)||(5735401-5735474)
chr4 (170-207)||(26125905-26125942)
chr4 (170-207)||(38721534-38721571)
chr4 (32-105)||(47579416-47579489)
chr4 (32-105)||(49768575-49768648)
chr4 (46-83)||(51456506-51456543)
chr4 (46-98)||(43968243-43968295)
chr4 (167-207)||(54330718-54330758)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-106)||(67898-68003)
scaffold0018 (167-207)||(67798-67838)
[»] chr7 (76 HSPs)
chr7 (1-106)||(28061644-28061749)
chr7 (1-106)||(36623336-36623441)
chr7 (1-106)||(40256085-40256190)
chr7 (1-106)||(42890472-42890577)
chr7 (1-106)||(44732040-44732145)
chr7 (1-106)||(47156055-47156160)
chr7 (1-106)||(48602464-48602569)
chr7 (1-106)||(39130055-39130160)
chr7 (1-105)||(32431488-32431592)
chr7 (4-106)||(16778536-16778638)
chr7 (1-106)||(7438931-7439036)
chr7 (1-106)||(20885131-20885236)
chr7 (1-106)||(36585137-36585242)
chr7 (1-106)||(38851976-38852081)
chr7 (1-106)||(40090047-40090152)
chr7 (1-106)||(41898016-41898121)
chr7 (1-106)||(35117154-35117258)
chr7 (1-106)||(46479857-46479962)
chr7 (1-105)||(30342102-30342206)
chr7 (4-103)||(42877417-42877516)
chr7 (1-103)||(25566680-25566781)
chr7 (4-93)||(7457864-7457952)
chr7 (1-106)||(41134617-41134717)
chr7 (5-106)||(2198634-2198735)
chr7 (1-106)||(5788506-5788611)
chr7 (1-102)||(11502713-11502814)
chr7 (1-89)||(6174864-6174952)
chr7 (1-103)||(8683846-8683945)
chr7 (26-106)||(46103499-46103579)
chr7 (1-106)||(3851105-3851207)
chr7 (4-106)||(41088618-41088720)
chr7 (1-73)||(46322127-46322199)
chr7 (4-105)||(6766680-6766781)
chr7 (46-106)||(21379817-21379877)
chr7 (4-103)||(4131635-4131734)
chr7 (10-89)||(26161633-26161712)
chr7 (2-100)||(36341649-36341747)
chr7 (4-105)||(16870610-16870711)
chr7 (31-105)||(27045538-27045612)
chr7 (4-105)||(49101943-49102044)
chr7 (46-106)||(23707552-23707612)
chr7 (10-98)||(49110607-49110695)
chr7 (9-102)||(3785556-3785649)
chr7 (4-105)||(35570179-35570285)
chr7 (169-207)||(41898184-41898222)
chr7 (4-89)||(7169157-7169242)
chr7 (30-71)||(42662243-42662284)
chr7 (35-103)||(5529073-5529141)
chr7 (31-99)||(37467444-37467511)
chr7 (29-92)||(38767202-38767265)
chr7 (2-53)||(45331941-45331992)
chr7 (169-207)||(28061543-28061581)
chr7 (27-89)||(34750556-34750618)
chr7 (169-207)||(36623504-36623542)
chr7 (169-207)||(46103398-46103436)
chr7 (169-207)||(47156223-47156261)
chr7 (169-207)||(48602632-48602670)
chr7 (30-102)||(47525969-47526042)
chr7 (167-207)||(3851268-3851308)
chr7 (167-207)||(11502608-11502648)
chr7 (167-207)||(16778699-16778739)
chr7 (26-105)||(31466410-31466489)
chr7 (169-207)||(23707451-23707489)
chr7 (29-103)||(36515895-36515969)
chr7 (169-207)||(38851875-38851913)
chr7 (169-207)||(42890372-42890410)
chr7 (46-103)||(19120662-19120719)
chr7 (65-102)||(46321285-46321322)
chr7 (46-98)||(4048871-4048923)
chr7 (169-205)||(7439099-7439135)
chr7 (167-207)||(20885297-20885337)
chr7 (167-207)||(32431386-32431426)
chr7 (167-207)||(36585856-36585896)
chr7 (9-105)||(42834327-42834423)
chr7 (167-207)||(42877580-42877620)
chr7 (70-106)||(46480016-46480052)
[»] chr3 (59 HSPs)
chr3 (1-106)||(13499464-13499569)
chr3 (1-106)||(39866270-39866375)
chr3 (1-106)||(42490325-42490430)
chr3 (1-105)||(27334861-27334965)
chr3 (1-106)||(21797584-21797689)
chr3 (1-106)||(27010603-27010708)
chr3 (1-106)||(20765224-20765329)
chr3 (1-106)||(33415827-33415932)
chr3 (1-106)||(36227573-36227678)
chr3 (1-106)||(42761612-42761717)
chr3 (1-102)||(33803549-33803651)
chr3 (1-106)||(21005321-21005426)
chr3 (1-106)||(43467871-43467976)
chr3 (14-106)||(30213845-30213937)
chr3 (1-91)||(34912286-34912376)
chr3 (4-105)||(6910365-6910466)
chr3 (3-103)||(38137854-38137954)
chr3 (1-98)||(54507669-54507766)
chr3 (1-106)||(19823928-19824028)
chr3 (1-106)||(43181484-43181590)
chr3 (5-105)||(44561816-44561916)
chr3 (4-105)||(3430407-3430505)
chr3 (4-103)||(52167240-52167339)
chr3 (4-105)||(15332936-15333037)
chr3 (1-62)||(45613601-45613662)
chr3 (4-105)||(41252896-41252994)
chr3 (31-105)||(48334651-48334724)
chr3 (32-105)||(41751540-41751613)
chr3 (2-89)||(25527435-25527520)
chr3 (27-105)||(44856400-44856478)
chr3 (10-102)||(22786667-22786757)
chr3 (29-105)||(33128049-33128125)
chr3 (169-207)||(13499363-13499401)
chr3 (35-105)||(15568065-15568135)
chr3 (169-207)||(20765392-20765430)
chr3 (169-207)||(27010502-27010540)
chr3 (169-207)||(27334759-27334797)
chr3 (169-207)||(39866169-39866207)
chr3 (169-207)||(42490224-42490262)
chr3 (169-207)||(42761511-42761549)
chr3 (10-102)||(22782303-22782393)
chr3 (167-207)||(6910528-6910568)
chr3 (66-106)||(28690338-28690378)
chr3 (32-104)||(30057358-30057430)
chr3 (167-207)||(36227739-36227779)
chr3 (31-94)||(17643789-17643852)
chr3 (31-105)||(23224286-23224361)
chr3 (1-40)||(32220891-32220930)
chr3 (71-106)||(32220931-32220966)
chr3 (169-207)||(21005489-21005527)
chr3 (12-78)||(27813445-27813511)
chr3 (169-207)||(30213999-30214037)
chr3 (19-105)||(38492181-38492267)
chr3 (29-103)||(41943270-41943344)
chr3 (32-105)||(1327442-1327515)
chr3 (32-105)||(18659182-18659255)
chr3 (35-79)||(3017853-3017897)
chr3 (167-207)||(28690442-28690482)
chr3 (167-207)||(38138019-38138059)
[»] chr1 (52 HSPs)
chr1 (1-106)||(11641196-11641301)
chr1 (1-106)||(36757615-36757720)
chr1 (1-106)||(6402539-6402644)
chr1 (1-102)||(16120573-16120674)
chr1 (1-102)||(30003561-30003662)
chr1 (1-106)||(40771901-40772006)
chr1 (1-106)||(42788671-42788776)
chr1 (1-106)||(17305982-17306087)
chr1 (1-106)||(30701746-30701851)
chr1 (1-106)||(36399126-36399231)
chr1 (1-102)||(40977621-40977722)
chr1 (1-106)||(9342774-9342879)
chr1 (1-106)||(52024054-52024159)
chr1 (1-106)||(6766400-6766502)
chr1 (1-102)||(26910104-26910205)
chr1 (1-106)||(27292668-27292773)
chr1 (1-106)||(24321287-24321394)
chr1 (1-106)||(42735294-42735402)
chr1 (1-105)||(15912466-15912570)
chr1 (18-106)||(42367425-42367513)
chr1 (1-98)||(48375030-48375127)
chr1 (1-89)||(4302146-4302234)
chr1 (2-105)||(28030811-28030914)
chr1 (4-105)||(3485337-3485438)
chr1 (10-105)||(38153407-38153502)
chr1 (4-105)||(40800517-40800618)
chr1 (4-105)||(15382556-15382657)
chr1 (30-98)||(22575724-22575792)
chr1 (2-105)||(44647843-44647946)
chr1 (11-103)||(16689862-16689951)
chr1 (59-106)||(25171240-25171287)
chr1 (10-89)||(30385291-30385370)
chr1 (36-103)||(31444986-31445053)
chr1 (27-98)||(50972771-50972842)
chr1 (2-80)||(44644510-44644588)
chr1 (59-103)||(44452120-44452164)
chr1 (31-98)||(14777090-14777157)
chr1 (169-207)||(6402438-6402476)
chr1 (169-207)||(11641095-11641133)
chr1 (169-207)||(36757514-36757552)
chr1 (48-105)||(323990-324047)
chr1 (43-100)||(7568621-7568678)
chr1 (29-102)||(9881332-9881405)
chr1 (167-207)||(9342673-9342713)
chr1 (167-207)||(27292834-27292874)
chr1 (167-207)||(42367324-42367364)
chr1 (169-207)||(6766565-6766603)
chr1 (169-207)||(17306150-17306188)
chr1 (2-86)||(25695426-25695513)
chr1 (32-105)||(52379119-52379192)
chr1 (167-207)||(15912366-15912406)
chr1 (167-207)||(30003728-30003768)
[»] scaffold0022 (2 HSPs)
scaffold0022 (4-106)||(100776-100878)
scaffold0022 (167-207)||(100675-100715)
[»] scaffold0295 (2 HSPs)
scaffold0295 (5-106)||(13846-13947)
scaffold0295 (1-34)||(9400-9433)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-106)||(161966-162071)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-103)||(70989-71090)
scaffold0056 (170-207)||(71157-71194)
[»] scaffold0225 (1 HSPs)
scaffold0225 (4-103)||(8965-9064)
[»] scaffold0029 (1 HSPs)
scaffold0029 (4-103)||(138162-138261)
[»] scaffold0099 (1 HSPs)
scaffold0099 (30-102)||(28784-28857)
[»] scaffold0262 (1 HSPs)
scaffold0262 (4-103)||(22811-22910)
[»] scaffold0608 (1 HSPs)
scaffold0608 (29-103)||(1576-1650)
[»] scaffold0595 (1 HSPs)
scaffold0595 (30-105)||(4005-4081)
[»] scaffold0009 (2 HSPs)
scaffold0009 (29-105)||(53550-53626)
scaffold0009 (46-103)||(217007-217064)
[»] scaffold0366 (1 HSPs)
scaffold0366 (26-105)||(14189-14268)
[»] scaffold0002 (1 HSPs)
scaffold0002 (64-103)||(315634-315673)


Alignment Details
Target: chr2 (Bit Score: 102; Significance: 7e-51; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11841827 - 11841722
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11841827 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 11841728  T
Q  101 ctcgac 106  Q
    ||||||    
T  11841727 ctcgac 11841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5405024 - 5405129
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5405024 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 5405123  T
Q  101 ctcgac 106  Q
    ||||||    
T  5405124 ctcgac 5405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7608077 - 7608182
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7608077 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 7608176  T
Q  101 ctcgac 106  Q
    ||||||    
T  7608177 ctcgac 7608182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8042256 - 8042151
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  8042256 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 8042157  T
Q  101 ctcgac 106  Q
    ||||||    
T  8042156 ctcgac 8042151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19141300 - 19141195
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19141300 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 19141201  T
Q  101 ctcgac 106  Q
    ||||||    
T  19141200 ctcgac 19141195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39358174 - 39358279
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  39358174 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgt 39358273  T
Q  101 ctcgac 106  Q
    ||||||    
T  39358274 ctcgac 39358279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44365185 - 44365290
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44365185 aatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 44365284  T
Q  101 ctcgac 106  Q
    ||||||    
T  44365285 ctcgac 44365290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6223094 - 6223199
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  6223094 aatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaagatgatgtttgatttgt 6223193  T
Q  101 ctcgac 106  Q
    ||||||    
T  6223194 ctcgac 6223199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2183191 - 2183089
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   | ||||||||||||    
T  2183191 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaatattagcatgtaa---gatgtttgatttgt 2183095  T
Q  101 ctcgac 106  Q
    ||||||    
T  2183094 ctcgac 2183089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 7799876 - 7799978
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  7799876 atttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtc 7799975  T
Q  102 tcg 104  Q
    |||    
T  7799976 tcg 7799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36072202 - 36072304
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  36072202 aatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaagatgttatttgatttgt 36072301  T
Q  101 ctc 103  Q
    |||    
T  36072302 ctc 36072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33607404 - 33607505
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    |||||| ||||||||| ||||||    
T  33607404 aatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat----atgtaagatgttgttttatttgt 33607499  T
Q  101 ctcgac 106  Q
    ||||||    
T  33607500 ctcgac 33607505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 13125362 - 13125275
Alignment:
Q  18 ctattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  13125362 ctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgtttgatttgtctcga 13125275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19262708 - 19262790
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    ||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19262708 aattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 19262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 44644905 - 44644999
Alignment:
Q  8 gcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||| ||| ||| ||||||||| ||||||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgtttaatttgtct 44644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36719553 - 36719453
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||   |||||||||| |||||||||||||||||||||||||||     |||||||||||||||||||||| ||| ||||||||||||||||    
T  36719553 aatttttgcaacaagcactattcacttgacttactttgaccatactttttaa-----gtataaatacaaatattagcatttaagatgttgtttgatttgt 36719459  T
Q  101 ctcgac 106  Q
    ||||||    
T  36719458 ctcgac 36719453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 32774628 - 32774720
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||| ||||||||  |||||| ||||||||||||||||||    
T  32774628 aatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaatattaatatgtaagatgttgtttgatttgtct 32774720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 9172352 - 9172276
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||    
T  9172352 acttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgtttgatttgcctcga 9172276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 11931722 - 11931818
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||| |||| |||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  11931722 ttttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcatttaagatgttgtttgatttgt 11931818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 22839157 - 22839057
Alignment:
Q  5 tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcg 104  Q
    ||||||||||||||||||||  | |||||||||||||||| |||||||||| | |||||||  |||| ||||||| ||| ||||||||||||||||||||    
T  22839157 tttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgtttgatttgtctcg 22839058  T
Q  105 a 105  Q
    |    
T  22839057 a 22839057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 24252016 - 24252089
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| |||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  24252016 acttattttgaccatattttttaactaatatataaatacaaatgttagcatgt-aaatgttgtttgatttgtctc 24252089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 38292008 - 38292082
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||||||| |||||||||| | ||||||||||||| ||| ||||||| |||||||||||||||||||    
T  38292008 acttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 38292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 16865083 - 16865180
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttg 99  Q
    |||||| |||| | || ||||||| |||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||  ||||||| ||||||    
T  16865083 atttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaagttgttgttcgatttg 16865180  T

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Target: chr2; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 9007015 - 9006939
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 80  Q
    |||| ||||||||| ||||||| |  ||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  9007015 ttttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 9553926 - 9553851
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||||  | |||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  9553926 acttactttgaccgcattttttaactaatatataaat-caaatattaacatgtaaaatgttgttcgatttgtctcga 9553851  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 13117548 - 13117457
Alignment:
Q  11 atgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||| || || | |||||||||||||||| ||||||||| || |||||||| ||||||||| || ||| |||||||| |||||||||    
T  13117548 atgtgcactgtttatataacttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgttcgatttgtct 13117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 13598472 - 13598523
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaacta 55  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  13598472 tttttcaatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 31610876 - 31610785
Alignment:
Q  12 tgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||||  | ||||| ||| |||||  |||||||||||| ||||||||||||| |||| |||||| | |||||||||||||||||    
T  31610876 tgtgcactattcacataacttatttttaccattttttttaactaatatataaatacaaatgttagaatgtaagacgttgtttgatttgtctc 31610785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 24093768 - 24093671
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatact-ttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||| |||||| | ||| |||||||||||||||| ||||||||||  ||| ||||||||| ||||||||||| |||||||| |||||||    
T  24093768 tttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatat-aatacaaatgttagcatgtaagatgttgttcgatttgt 24093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 38839136 - 38839205
Alignment:
Q  36 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||| ||| ||||||| |||||| ||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtatgatttctctcga 38839205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 44365351 - 44365391
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44365351 cggtcaaaattatgcattggcatatgtgaagtgattgactt 44365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 42133789 - 42133868
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||||||||| |   ||||||||| |||| |||||||||||| ||||||||||||| |||||||| || |||||    
T  42133789 aatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaatgttagcatgaaagatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 43444771 - 43444692
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||| ||||||||| ||||||  | | || ||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  43444771 ttttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 43444692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 11841661 - 11841621
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  11841661 cggtcaaaattatgcattagcatatgtgaagtgattgactt 11841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 5405192 - 5405230
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  5405192 gtcaaaattatgcattggcatatgtgaagtggttgactt 5405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 7608245 - 7608283
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  7608245 gtcaaaattatgcattggcatatgtgaagtggttgactt 7608283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 19141132 - 19141094
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  19141132 gtcaaaattatgcattggcatatgtgaagtggttgactt 19141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 19166014 - 19165913
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||||||||| ||||||  ||||||  ||||| |||  ||||||| |||| ||||||||||| | ||| ||||||| ||||||||| |||||| |    
T  19166014 tttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcatgtaagatgttgtttaatttgttt 19165916  T
Q  103 cga 105  Q
    |||    
T  19165915 cga 19165913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 44563219 - 44563130
Alignment:
Q  14 tgcactattcatttgacttactttgaccata-ctttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||| | ||||||||||| ||||  ||||||| |||| |||||||||| || |||||||||| |||| |||||||||| ||||    
T  44563219 tgcactattcatataacttactttgatcatatttttttaattaatatataaatacatatgttagcatgtagaatg-tgtttgatttttctc 44563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 24259532 - 24259493
Alignment:
Q  64 atacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  24259532 atacaaatgttagcatgtaagatgttgtttgatttgtctc 24259493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 31904085 - 31904027
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgt 88  Q
    |||||| |||||||| |||||||||||| |||||||| |||||||| || |||| ||||    
T  31904085 cttactctgaccatattttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 36072370 - 36072408
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  36072370 gtcaaaattgtgcattgtcatatgtgaagtgattgactt 36072408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 36177809 - 36177723
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||| ||| ||||||  ||| ||| |||||||||| ||||| ||||||| |||||||| |||||||| ||| ||| |||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 13125210 - 13125173
Alignment:
Q  170 tcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||| | |||||||||||||||||||||||||||    
T  13125210 tcaaaattgtacattggcatatgtgaagtgattgactt 13125173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 13442979 - 13443063
Alignment:
Q  18 ctattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| || ||||| ||||| | |||| || ||||||||| |||||||||| || ||| ||| |||| ||||||||||||||||||    
T  13442979 ctatttatctgactcactttaatcatatttgttaactaatatataaatacacattttaacatttaaa-tgttgtttgatttgtctc 13443063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 14372280 - 14372207
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||  ||||||  | ||||| ||||| || ||||||| |||||||| |||| |||||||    
T  14372280 tactttgaccatacttttctactaattcacaaatataaataataacatgtaagatgttgttggattcgtctcga 14372207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 2831762 - 2831834
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||||||||||||| ||||  |||||| || ||||| ||||| || ||||||| |||| ||| ||||||||    
T  2831762 acttactttgaccatatttttctactaatatacaaatataaataatatcatgtaagatgtcgttagatttgtc 2831834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 3837308 - 3837268
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaat 86  Q
    |||||||||||| |||||||| |||||| ||||||||||||    
T  3837308 tttttaactaatatataaatataaatatcagcatgtaaaat 3837268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 39358329 - 39358369
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||  |||||||    
T  39358329 cggtcaaaattgtgcattggcatatgtgaagtagttgactt 39358369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42587482 - 42587377
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42587482 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 42587383  T
Q  101 ctcgac 106  Q
    ||||||    
T  42587382 ctcgac 42587377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 616811 - 616916
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  616811 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 616910  T
Q  101 ctcgac 106  Q
    ||||||    
T  616911 ctcgac 616916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 623204 - 623309
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  623204 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 623303  T
Q  101 ctcgac 106  Q
    ||||||    
T  623304 ctcgac 623309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14237308 - 14237413
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14237308 aatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 14237407  T
Q  101 ctcgac 106  Q
    ||||||    
T  14237408 ctcgac 14237413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18044453 - 18044558
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18044453 aatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 18044552  T
Q  101 ctcgac 106  Q
    ||||||    
T  18044553 ctcgac 18044558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32998478 - 32998583
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32998478 aatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 32998577  T
Q  101 ctcgac 106  Q
    ||||||    
T  32998578 ctcgac 32998583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41263838 - 41263943
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41263838 aatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 41263937  T
Q  101 ctcgac 106  Q
    ||||||    
T  41263938 ctcgac 41263943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13216955 - 13216850
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  13216955 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaagatgttgtttgatttgt 13216856  T
Q  101 ctcgac 106  Q
    ||||||    
T  13216855 ctcgac 13216850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40494412 - 40494517
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  40494412 aatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 40494511  T
Q  101 ctcgac 106  Q
    ||||||    
T  40494512 ctcgac 40494517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2766282 - 2766178
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  2766282 aatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgtttgatttgt 2766183  T
Q  101 ctcga 105  Q
    |||||    
T  2766182 ctcga 2766178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3100729 - 3100624
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  3100729 aatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgattgatttgt 3100630  T
Q  101 ctcgac 106  Q
    ||||||    
T  3100629 ctcgac 3100624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 132047 - 132150
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  132047 tttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtct 132146  T
Q  103 cgac 106  Q
    ||||    
T  132147 cgac 132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22489508 - 22489402
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag-catgtaaaatgttgtttgatttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || |||||||||||||||    
T  22489508 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaatgcaagatgttgtttgatttg 22489409  T
Q  100 tctcgac 106  Q
    |||||||    
T  22489408 tctcgac 22489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36642093 - 36641987
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccat-actttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  36642093 aatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaatattagcatgtaagatgttgtttgatttg 36641994  T
Q  100 tctcgac 106  Q
    |||||||    
T  36641993 tctcgac 36641987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4270326 - 4270221
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  4270326 aatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacatgtaatatgttgtgtgatttgt 4270227  T
Q  101 ctcgac 106  Q
    ||||||    
T  4270226 ctcgac 4270221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 5878345 - 5878446
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  5878345 atttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatatcgtttgatttgtc 5878444  T
Q  102 tc 103  Q
    ||    
T  5878445 tc 5878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35403544 - 35403649
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||    
T  35403544 aatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacatgtaagatgttgtttaatttgt 35403643  T
Q  101 ctcgac 106  Q
    ||||||    
T  35403644 ctcgac 35403649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38957198 - 38957303
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||| | |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  38957198 aatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcatgtaagatgttgtttgatttgt 38957297  T
Q  101 ctcgac 106  Q
    ||||||    
T  38957298 ctcgac 38957303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8394374 - 8394479
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||| || ||| ||||||||||||||||    
T  8394374 aatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaatattagtatttaagatgttgtttgatttgt 8394473  T
Q  101 ctcgac 106  Q
    ||||||    
T  8394474 ctcgac 8394479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11637810 - 11637915
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |    
T  11637810 aatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgtaagatgttgtttgatttat 11637909  T
Q  101 ctcgac 106  Q
    ||||||    
T  11637910 ctcgac 11637915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 6414198 - 6414095
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||| |||| ||| | ||||||||||||||| ||||||||    
T  6414198 atttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtatgtaaaatgttgttcgatttgtc 6414099  T
Q  102 tcga 105  Q
    ||||    
T  6414098 tcga 6414095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 24524131 - 24524202
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 75  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24524131 ttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 36167105 - 36167182
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 79  Q
    |||||||||||||| |||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  36167105 atttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaatattagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18090357 - 18090460
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||| || ||||||| ||||| |||| |||||||||||| |||||||| |||| ||||||| ||| |||||||| |||||||    
T  18090357 aattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgttagcatataagatgttgttcgatttgt 18090455  T
Q  101 ctcga 105  Q
    |||||    
T  18090456 ctcga 18090460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 3370488 - 3370385
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||||||| ||| ||||  |||||||||||||||||| ||||||| |||| ||||||||||||| |||  |||||| || ||||||||||||| |    
T  3370488 tttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgtttgatttgttt 3370389  T
Q  103 cgac 106  Q
    ||||    
T  3370388 cgac 3370385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 5173282 - 5173384
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt-gtttgatttgtct 102  Q
    |||||||||||| ||||||||| ||| ||||||||| |||| | |||||||||| ||||||||||||||||| ||||||| ||||| |||| |||| |||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagatgttagtttcatttatct 5173381  T
Q  103 cga 105  Q
    |||    
T  5173382 cga 5173384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 33700299 - 33700205
Alignment:
Q  9 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| ||||||||||  |  ||||||||||||||| |||||||||||| ||||||||||||| |||| | |||| |||||||||||||||||||    
T  33700299 caatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgttagtaagtaagatgttgtttgatttgtctc 33700205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 38497142 - 38497204
Alignment:
Q  43 tactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  38497142 tactttttaactaatgtataaatacaaatattagcatggaagatgttgtttgatttgtttcga 38497204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 18035163 - 18035232
Alignment:
Q  36 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||| |||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgtttgatttgtctcga 18035232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 40204947 - 40204852
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||   ||||||||||| |||| ||||| |||||| ||||||||||||| |||||| ||||  ||||||||||||| ||||||    
T  40204947 aatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatgttagcaggtaagttgttgtttgatttatctcga 40204852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 40716712 - 40716655
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagatgttgtttgatttgtctc 40716655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 9632223 - 9632287
Alignment:
Q  41 catactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||| ||||| |||||  ||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  9632223 catattttttcactaacatataaatactaatgttagcatgtaagatgttgtttgatttgtctcga 9632287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 32855638 - 32855594
Alignment:
Q  59 tataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  32855638 tataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 32855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 38958942 - 38958890
Alignment:
Q  54 taatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    ||||||||||||| ||||||||  |||||| ||||||||||||||||||||||    
T  38958942 taatgtataaataaaaatattaatatgtaagatgttgtttgatttgtctcgac 38958890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 18020928 - 18021001
Alignment:
Q  35 tttgaccatactttttaactaatgtataaatacaaa---tattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||| |||||||||||| || |||||||||   | ||||||||||| || ||||||||||||||||||    
T  18020928 tttgaccatattttttaactaatatacaaatacaaaatgtgttagcatgtaagatattgtttgatttgtctcga 18021001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 36641924 - 36641886
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  36641924 gtcaaaattatgcattggcatatgtgaagtggttgactt 36641886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 40494580 - 40494618
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40494580 gtcaaaattatgcattggcatatgtgaagtggttgactt 40494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 18044619 - 18044659
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  18044619 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 18044659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 41264004 - 41264044
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  41264004 cggtcaaaattatgtattggtatatgtgaagtgattgactt 41264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 1580817 - 1580896
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  1580817 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 1580896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 21109857 - 21109818
Alignment:
Q  64 atacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  21109857 atacaaatgttagcatgtaagatgttgtttgatttgtctc 21109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 623372 - 623410
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  623372 gtcaaaattatgcattgacatatgtgaagtggttgactt 623410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13217255 - 13217219
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttacttt 37  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  13217255 aatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 14237474 - 14237514
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||| ||||||||||||| |||||||    
T  14237474 cggtcaaaattgtgcattgacatatgtgaagtggttgactt 14237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 32998643 - 32998675
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtg 199  Q
    ||||||||||| |||||||||||||||||||||    
T  32998643 cggtcaaaattgtgcattggcatatgtgaagtg 32998675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 33905517 - 33905465
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| || ||||| |||| ||||||| ||||||||||||| ||||    
T  33905517 tttttaactaatataaaaatataaatgttagcatataaaatgttgttttattt 33905465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 42587316 - 42587276
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  42587316 cggtaaaaattgtgcattggcatatgtgaagtggttgactt 42587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20226532 - 20226427
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20226532 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgttgtttgatttgt 20226433  T
Q  101 ctcgac 106  Q
    ||||||    
T  20226432 ctcgac 20226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22120516 - 22120411
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22120516 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgttgtttgatttgt 22120417  T
Q  101 ctcgac 106  Q
    ||||||    
T  22120416 ctcgac 22120411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22054800 - 22054905
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22054800 aatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 22054899  T
Q  101 ctcgac 106  Q
    ||||||    
T  22054900 ctcgac 22054905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 24624175 - 24624072
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  24624175 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 24624076  T
Q  101 ctcg 104  Q
    ||||    
T  24624075 ctcg 24624072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17214018 - 17213916
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  17214018 aatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaatattagcatgtaagatgttgtttgatttgt 17213919  T
Q  101 ctc 103  Q
    |||    
T  17213918 ctc 17213916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4147959 - 4148064
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  4147959 aatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgc 4148058  T
Q  101 ctcgac 106  Q
    ||||||    
T  4148059 ctcgac 4148064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6563254 - 6563359
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  6563254 aatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 6563353  T
Q  101 ctcgac 106  Q
    ||||||    
T  6563354 ctcgac 6563359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18668922 - 18668817
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18668922 aatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 18668823  T
Q  101 ctcgac 106  Q
    ||||||    
T  18668822 ctcgac 18668817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19088192 - 19088087
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19088192 aatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 19088093  T
Q  101 ctcgac 106  Q
    ||||||    
T  19088092 ctcgac 19088087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32414913 - 32414808
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  32414913 aattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 32414814  T
Q  101 ctcgac 106  Q
    ||||||    
T  32414813 ctcgac 32414808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 1040854 - 1040957
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtct 1040953  T
Q  103 cgac 106  Q
    ||||    
T  1040954 cgac 1040957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3989497 - 3989393
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  3989497 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcatgtaagatgttgtttgatttgt 3989399  T
Q  101 ctcgac 106  Q
    ||||||    
T  3989398 ctcgac 3989393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15383164 - 15383059
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  15383164 aatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcatgtaagatgttgtttgattttt 15383065  T
Q  101 ctcgac 106  Q
    ||||||    
T  15383064 ctcgac 15383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17257885 - 17257784
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  17257885 aatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgtaagatgttgtttgatttgt 17257786  T
Q  101 ct 102  Q
    ||    
T  17257785 ct 17257784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32671844 - 32671949
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  32671844 aatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgt 32671943  T
Q  101 ctcgac 106  Q
    ||||||    
T  32671944 ctcgac 32671949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21540863 - 21540758
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||  |||||||||||| ||||||||||    
T  21540863 aatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaaaatgttatttgatttgt 21540764  T
Q  101 ctcgac 106  Q
    ||||||    
T  21540763 ctcgac 21540758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10520496 - 10520600
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  10520496 aatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagatattaatatgtaaaatgttgtttgatttgt 10520595  T
Q  101 ctcga 105  Q
    |||||    
T  10520596 ctcga 10520600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24955630 - 24955525
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| |||||||| |||||| |||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24955630 aatttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtttgatttgt 24955531  T
Q  101 ctcgac 106  Q
    ||||||    
T  24955530 ctcgac 24955525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20437248 - 20437142
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttg 99  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  20437248 aatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaacatgtaagatgttgtttgatttg 20437149  T
Q  100 tctcgac 106  Q
     ||||||    
T  20437148 cctcgac 20437142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25476042 - 25475942
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||     |||||||||||| ||||||||||||||||    
T  25476042 aatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata-----attagcatgtaagatgttgtttgatttgt 25475948  T
Q  101 ctcgac 106  Q
    ||||||    
T  25475947 ctcgac 25475942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 28477784 - 28477878
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  28477784 ttttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 28477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 4440879 - 4440982
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||  |||  ||||||||||||| ||||||||||| |||||||| |||||||     
T  4440879 atttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagcatgtaagatgttgttcgatttgtt 4440978  T
Q  102 tcga 105  Q
    ||||    
T  4440979 tcga 4440982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 12226020 - 12226107
Alignment:
Q  18 ctattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| | |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  12226020 ctattcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatattgtttgatttgtctcga 12226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 29790237 - 29790331
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||  ||||||||  |||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  29790237 ttttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 29790331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31569260 - 31569178
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||| ||||||    
T  31569260 aatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatgtaa 31569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 15337519 - 15337608
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 93  Q
    |||| |||| |||| ||||||  | |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15337519 ttttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaaaatgttgttt 15337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 29693914 - 29694015
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||  ||||| ||||||||| ||    
T  29693914 ttttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaagttgttgcttgatttgtatc 29694013  T
Q  104 ga 105  Q
    ||    
T  29694014 ga 29694015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 2360027 - 2360119
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||| |||||| || | | |||||||||| ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  2360027 aatgtgtactatttatataatttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgtttgatttgtct 2360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 10298798 - 10298703
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||||||  |  |||| |||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  10298798 aatgtgcactattcacatagcttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgttttttgatttttctcga 10298703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 23158115 - 23158041
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||||| | |||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 23158041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 22054966 - 22055006
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22054966 cggtcaaaattatgcattggcatatgtgaagtgattgactt 22055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 8101664 - 8101727
Alignment:
Q  37 tgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||||||| ||||| ||||||||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagatgttatttgatttgt 8101727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 19240823 - 19240744
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||||||  ||||||||  | ||||| |||||||||| |||||||||||| |||||||||||||||| ||| ||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaa 19240744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 3623913 - 3623856
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||| |||||    
T  3623913 ttactttgaccata-tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 17155186 - 17155268
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 92  Q
    ||||| |||||||||  |||| |||||||| |||||||  |||||||  ||||||||||||| ||||||||||| ||||||||    
T  17155186 aatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgtaagatgttgtt 17155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 31869766 - 31869824
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||||||  |||||||||||| ||||||||||||| ||||||||||| |||||    
T  31869766 ttactttgaccattttttttaactaatatataaatacaaatgttagcatgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 5495322 - 5495374
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| ||||||||||||| ||||||||||| || |||||||||||    
T  5495322 tttttaactaatatataaatacaaatgttagcatgtaagattttgtttgattt 5495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 16193053 - 16193014
Alignment:
Q  64 atacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgtttgatttgtctc 16193014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 24624007 - 24623969
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  24624007 gtcaaaattatgcattggcatatgtgaagtggttgactt 24623969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 32414745 - 32414707
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  32414745 gtcaaaattatgcattggcatatgtgaagtggttgactt 32414707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 4148128 - 4148165
Alignment:
Q  170 tcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4148128 tcaaaattatgcattggcatatgtgaagtggttgactt 4148165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 18992112 - 18992033
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  18992112 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 18992033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 1260490 - 1260540
Alignment:
Q  33 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||||||| |||||||||||| ||||||||||| | |||||| ||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaa 1260540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 6563422 - 6563460
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  6563422 gtcaaaaatatgcattggcatatgtgaagtggttgactt 6563460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 19088024 - 19087986
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  19088024 gtcaaaattatgcattggcatatgtgaagcggttgactt 19087986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 25435627 - 25435541
Alignment:
Q  19 tattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  25435627 tattgatttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctcga 25435541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 14214138 - 14214065
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||| |||||||  |||||  ||||||| || |||||||| ||| |||||||| |||| |||||||||||    
T  14214138 aatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgtaa 14214065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 18668756 - 18668716
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||| ||||||| |||||||    
T  18668756 cggtcaaaattgtgcattggcatatatgaagtggttgactt 18668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 20226366 - 20226326
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  20226366 cggtaaaaattgtgcattggcatatgtgaagtggttgactt 20226326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 20437085 - 20437045
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||| |||||||||||||| ||||||||||||| |||||||    
T  20437085 cggttaaaattatgcattgacatatgtgaagtggttgactt 20437045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 21540697 - 21540657
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  21540697 cggtcaaaattgtgcattggcatgtgtgaagtggttgactt 21540657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 22120350 - 22120310
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  22120350 cggtaaaaattgtgcattggcatatgtgaagtggttgactt 22120310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 26567351 - 26567287
Alignment:
Q  29 acttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtt 92  Q
    ||||||||||| |||| ||||| ||||||| |||||||| ||||  |||||||||||| ||||||    
T  26567351 acttactttgatcatatttttttaactaatatataaatataaatggtagcatgtaaaacgttgtt 26567287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9502861 - 9502756
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  9502861 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 9502762  T
Q  101 ctcgac 106  Q
    ||||||    
T  9502761 ctcgac 9502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 978105 - 978210
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  978105 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 978204  T
Q  101 ctcgac 106  Q
    ||||||    
T  978205 ctcgac 978210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33387248 - 33387353
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  33387248 aatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 33387347  T
Q  101 ctcgac 106  Q
    ||||||    
T  33387348 ctcgac 33387353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8086264 - 8086159
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  8086264 aatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgt 8086165  T
Q  101 ctcgac 106  Q
    ||||||    
T  8086164 ctcgac 8086159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14634391 - 14634286
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  14634391 aatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 14634292  T
Q  101 ctcgac 106  Q
    ||||||    
T  14634291 ctcgac 14634286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 7224195 - 7224298
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7224195 tttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgtaaaatgttgtttgatttgtct 7224294  T
Q  103 cgac 106  Q
    ||||    
T  7224295 cgac 7224298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33587703 - 33587601
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  33587703 aatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgtaagatgttgtttgatttgt 33587604  T
Q  101 ctc 103  Q
    |||    
T  33587603 ctc 33587601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 40156229 - 40156331
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40156229 ttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 40156328  T
Q  104 gac 106  Q
    |||    
T  40156329 gac 40156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3472511 - 3472406
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3472511 aatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtttgatttgt 3472412  T
Q  101 ctcgac 106  Q
    | ||||    
T  3472411 cgcgac 3472406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 11251145 - 11251247
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||    
T  11251145 ttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgatgttatttgatttatctc 11251244  T
Q  104 gac 106  Q
    |||    
T  11251245 gac 11251247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18094315 - 18094210
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| || ||||||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  18094315 aatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttggtttgt 18094216  T
Q  101 ctcgac 106  Q
    ||||||    
T  18094215 ctcgac 18094210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30355108 - 30355003
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| |||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  30355108 aatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgt 30355009  T
Q  101 ctcgac 106  Q
    ||||||    
T  30355008 ctcgac 30355003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11785960 - 11785856
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatac-aaatattagcatgtaaaatgttgtttgatttg 99  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||    
T  11785960 aatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgtaagatgttgtttggtttg 11785861  T
Q  100 tctcg 104  Q
    |||||    
T  11785860 tctcg 11785856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27109717 - 27109821
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||| || | |||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  27109717 aatttttacaatatgtattattcatttgacttactttgat-atactttttaattaatgtaaaaatacaaatattagcatgtaagatgttgtttgatttgt 27109815  T
Q  101 ctcgac 106  Q
    ||||||    
T  27109816 ctcgac 27109821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 24992369 - 24992270
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| ||||||||||||||||  |  ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||    
T  24992369 ttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtctc 24992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 12447625 - 12447547
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||    
T  12447625 ttgacttactttgaccatactttttaactaatgtttaaatac--atattagcatgtaagatgttgtttgatttgtctcgac 12447547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 9050768 - 9050706
Alignment:
Q  43 tactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9050768 tactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcga 9050706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 34111992 - 34112072
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||| ||||||||||||||||| |||||||    
T  34111992 tttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaatattatcatgtaa 34112072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 11761125 - 11761196
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 11761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 39776659 - 39776746
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    ||||||||||||| |||||||||  | ||||| ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  39776659 atttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattagcatgtaaaatgtt 39776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 12007855 - 12007761
Alignment:
Q  12 tgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    ||||||||||| |  ||||||| ||||||| |||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||| |||||    
T  12007855 tgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatgctagcatgtaaaatgttgtttgatttgtttcgac 12007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 38916483 - 38916380
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    ||||||||| | |||||||||||  |||||| |||||||||||||||||||||||  ||||||||||||| ||||||||| | ||||| || |||||||     
T  38916483 atttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaatgttagcatgtgagatgttattcgatttgtt 38916384  T
Q  102 tcga 105  Q
    ||||    
T  38916383 tcga 38916380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 24916479 - 24916378
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatacttttt--aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||| ||||||| ||||||||  |  ||||||||||||||| |||||  ||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  24916479 ttttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtc 24916380  T
Q  102 tc 103  Q
    ||    
T  24916379 tc 24916378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 12456871 - 12456773
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||| |||||||||||||| |  | ||||||||| | |||| |||||||||||| || |||||||||| |||| |||||| ||||||||||||||||||    
T  12456871 ttttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgtttgatttgtct 12456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 18998745 - 18998819
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| |||||| |||||||||||| ||||||||||||| |||| |||||| |||||||||||||||| ||||    
T  18998745 ttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtttcga 18998819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 6996012 - 6996112
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| |||||||||||||||  | ||||| ||| || ||| |||||||||||| |||||||| |||| ||| |||||||||| ||||||||||||||||    
T  6996012 ttttgtaatgtgcactattcacataactta-tttaactatattttttaactaatatataaatataaatgttaccatgtaaaatattgtttgatttgtctc 6996110  T
Q  104 ga 105  Q
    ||    
T  6996111 ga 6996112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 32400400 - 32400457
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctc 32400457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 32017251 - 32017330
Alignment:
Q  11 atgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttg 90  Q
    ||||||| ||||||  | ||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||| ||||||    
T  32017251 atgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 20692622 - 20692543
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||||||||||| ||| || ||||| || ||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  20692622 atttttgcaatgtgcattatccacttgacgtattttgaccatactttttaaccaa--tataaatacaaatattaacatgtaa 20692543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 3422399 - 3422343
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  3422399 tttttaactaatatataaatacaaatgttagcatgtaagatgttgattgatttgtct 3422343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 27579638 - 27579562
Alignment:
Q  27 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||| || ||| |||||||||||| ||||||||||||| ||||||||||| || |  |||||||||||||    
T  27579638 tgacttactttaactatattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 27579562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 12360010 - 12359951
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||| ||||||||||||| |||||||| || || ||||||||||||||||||    
T  12360010 tttttaactaatatataaatacaaatgttagcatgaaagatattgtttgatttgtctcga 12359951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 35641804 - 35641900
Alignment:
Q  9 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||| | || || |||| ||||||||||||| ||||  |||||| |||||| | ||||| || ||| |||||||||||| ||||||||||||    
T  35641804 caatgtgcatttttgatctgacatactttgaccatatttttctactaatatataaagataaataatatcatataaaatgttgttggatttgtctcga 35641900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 26387084 - 26387017
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatt 97  Q
    |||||||||| |||| |||||||||||  |||||||| |||| ||||||| ||| |||||||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgtttgatt 26387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 978273 - 978311
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  978273 gtcaaaattatgcattggcatatgtgaagtggttgactt 978311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 9502693 - 9502655
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  9502693 gtcaaaattatgcattggcatatgtgaagtggttgactt 9502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 14634223 - 14634185
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  14634223 gtcaaaattatgcattggcatatgtgaagtggttgactt 14634185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 31197896 - 31197822
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||| ||| |||||||||||  ||||||||||||| |||  |||||||||| |||| ||||| ||||    
T  31197896 acttactttgacaataatttttaactaaaatataaatacaaatgttaatatgtaaaatgctgttcgatttctctc 31197822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 33387415 - 33387453
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  33387415 gtcaaaattatgcattggcatatgtgaagtggttgactt 33387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 36240157 - 36240095
Alignment:
Q  9 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 71  Q
    ||||||||||||||| | | |||| ||||||||||| |||| ||||||| |||||||||||||    
T  36240157 caatgtgcactattcttataactttctttgaccatatttttaaactaatatataaatacaaat 36240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 7607827 - 7607733
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||| ||||||||| ||||||| | | ||| |||||||||| |||||||    | |||||||||| |||||| ||| |||||||||||| |||||||    
T  7607827 atttttacaatgtgcaatattcatataaattagtttgaccatattttttaa----tatataaatacatatattaacatctaaaatgttgttagatttgt 7607733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 37495667 - 37495712
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaatatta 75  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||    
T  37495667 cttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 11251308 - 11251348
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  11251308 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 11251348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 5212974 - 5213053
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  5212974 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 5213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 10696821 - 10696856
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttga 39  Q
    |||||||||||||||||||||| |||||||||||||    
T  10696821 ttttgcaatgtgcactattcatatgacttactttga 10696856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 12446934 - 12446895
Alignment:
Q  168 ggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  12446934 ggtcaaaattgtgcattgacatatgtgaagtgattgactt 12446895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 32002066 - 32002145
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||| |||||||| ||||||||||||    
T  32002066 ttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggatttgtctcga 32002145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 7224359 - 7224397
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgac 205  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  7224359 cggtaaaaattgtgcattggcatatgtgaagtgattgac 7224397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 8086093 - 8086059
Alignment:
Q  173 aaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||| |||||||    
T  8086093 aaattatgcattggcatatgtgaagtggttgactt 8086059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 5947757 - 5947697
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||||| ||| |||||| ||||  ||||||||||||| | ||||| |||||||||    
T  5947757 acttactttgacaatattttttagctaacatataaatacaaatctaagcatataaaatgtt 5947697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 27109882 - 27109922
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||| ||||||||||||| |||||||    
T  27109882 cggtcaaaattgtgcattgacatatgtgaagtggttgactt 27109922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 43090932 - 43090984
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| |||||||| |||||| | ||||||||||||| || |||||    
T  43090932 tttttaactaatttataaatataaatatcaacatgtaaaatgttattcgattt 43090984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12240412 - 12240307
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12240412 aatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 12240313  T
Q  101 ctcgac 106  Q
    ||||||    
T  12240312 ctcgac 12240307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25296814 - 25296709
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25296814 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 25296715  T
Q  101 ctcgac 106  Q
    ||||||    
T  25296714 ctcgac 25296709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26170014 - 26170119
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26170014 aatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 26170113  T
Q  101 ctcgac 106  Q
    ||||||    
T  26170114 ctcgac 26170119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44232311 - 44232206
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  44232311 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 44232212  T
Q  101 ctcgac 106  Q
    ||||||    
T  44232211 ctcgac 44232206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12625279 - 12625383
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12625279 aatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 12625378  T
Q  101 ctcga 105  Q
    |||||    
T  12625379 ctcga 12625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31010242 - 31010347
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  31010242 aatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaatattagcatgtaagatattgtttgatttgt 31010341  T
Q  101 ctcgac 106  Q
    ||||||    
T  31010342 ctcgac 31010347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38416884 - 38416779
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  38416884 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 38416785  T
Q  101 ctcgac 106  Q
     |||||    
T  38416784 gtcgac 38416779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43967751 - 43967856
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  43967751 aatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 43967850  T
Q  101 ctcgac 106  Q
    ||||||    
T  43967851 ctcgac 43967856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 55191852 - 55191957
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||    
T  55191852 aatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagcatgcaaaatgttgtttgatttgt 55191951  T
Q  101 ctcgac 106  Q
    ||||||    
T  55191952 ctcgac 55191957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 47386518 - 47386415
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47386518 tttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtct 47386419  T
Q  103 cgac 106  Q
    ||||    
T  47386418 cgac 47386415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17446867 - 17446762
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17446867 aatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgt 17446768  T
Q  101 ctcgac 106  Q
    ||||||    
T  17446767 ctcgac 17446762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29830371 - 29830476
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  29830371 aatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 29830470  T
Q  101 ctcgac 106  Q
    ||||||    
T  29830471 ctcgac 29830476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35381128 - 35381023
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||    
T  35381128 aatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatctgt 35381029  T
Q  101 ctcgac 106  Q
     |||||    
T  35381028 ttcgac 35381023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 54330924 - 54330819
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  54330924 aatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttat 54330825  T
Q  101 ctcgac 106  Q
    ||||||    
T  54330824 ctcgac 54330819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 55209808 - 55209703
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  55209808 aatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 55209709  T
Q  101 ctcgac 106  Q
    ||||||    
T  55209708 ctcgac 55209703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 45291862 - 45291965
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtct 45291961  T
Q  103 cgac 106  Q
    ||||    
T  45291962 cgac 45291965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17610308 - 17610413
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  17610308 aatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaatattagcatgtaagatgttgtttaatttgt 17610407  T
Q  101 ctcgac 106  Q
    ||||||    
T  17610408 ctcgac 17610413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26125736 - 26125841
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26125736 aatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 26125835  T
Q  101 ctcgac 106  Q
    ||||||    
T  26125836 ctcgac 26125841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 50205773 - 50205876
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||| |||    
T  50205773 tttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagctcgtaagatgttgtttgatttatct 50205872  T
Q  103 cgac 106  Q
    ||||    
T  50205873 cgac 50205876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38716915 - 38717022
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaa---tgttgtttgatt 97  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  38716915 aatttttgcaatgtgcactattaatt-gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttgtttgatt 38717013  T
Q  98 tgtctcgac 106  Q
    |||||||||    
T  38717014 tgtctcgac 38717022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25918231 - 25918336
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  25918231 aatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcatgtaagatgttgtttgatttgt 25918330  T
Q  101 ctcgac 106  Q
    ||||||    
T  25918331 ctcgac 25918336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35686401 - 35686493
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 93  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  35686401 aatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaatattatcatgtaagatgttgttt 35686493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19433596 - 19433488
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccata----ctttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgat 96  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19433596 aatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaatacaaatattagcatgtaagatgttgtttgat 19433497  T
Q  97 ttgtctcga 105  Q
    |||||||||    
T  19433496 ttgtctcga 19433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 55800862 - 55800941
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 80  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55800862 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 3037016 - 3037112
Alignment:
Q  9 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||    
T  3037016 caatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaaaatattatttgatttgtctcga 3037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 4467744 - 4467648
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||||| |||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4467744 aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcgac 4467648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2760961 - 2760859
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||   | ||||||||||||    
T  2760961 aatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa---gatgtttgatttgt 2760865  T
Q  101 ctcgac 106  Q
    ||||||    
T  2760864 ctcgac 2760859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19595733 - 19595832
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||| ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  19595733 aatttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgtttgatttgt 19595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50620916 - 50620813
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  50620916 aattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcatgtaagatgttttttgatttgt 50620817  T
Q  101 ctcg 104  Q
    ||||    
T  50620816 ctcg 50620813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 9029680 - 9029578
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||| || |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  9029680 ttttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaaatattagcacgtaagatattgtttgatttgtctc 9029581  T
Q  104 gac 106  Q
    |||    
T  9029580 gac 9029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 27407852 - 27407747
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca--tgtaaaatgttgtttgatttg 99  Q
    ||||||||| |||| ||||||||  | ||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||| ||||||||||| |||    
T  27407852 atttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaatattagcatgtgtaagatgttgtttgagttg 27407753  T
Q  100 tctcga 105  Q
    ||||||    
T  27407752 tctcga 27407747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 36523201 - 36523105
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    ||||||||||| ||||||||| |  |||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||| |||||||| |||||    
T  36523201 atttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgttaacatgtaagatgttgttcgattt 36523105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 14144663 - 14144589
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  14144663 acttactttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgtttgatttgtctc 14144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 30446330 - 30446430
Alignment:
Q  5 tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcg 104  Q
    |||| ||| |||| ||||||  ||||||||||||||| || ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  30446330 tttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgtaaaatgttgtttgatttgtctcg 30446428  T
Q  105 ac 106  Q
    ||    
T  30446429 ac 30446430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 39307725 - 39307826
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    ||||||||||| | | |||||||  |||||||||||||   ||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||    
T  39307725 atttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgttagtatgtaaaatgttgtttaatttgtc 39307824  T
Q  102 tc 103  Q
    ||    
T  39307825 tc 39307826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 7614669 - 7614739
Alignment:
Q  27 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatt 97  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  7614669 tgacttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatt 7614739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 37767189 - 37767087
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| ||| ||||||||| |  |||||||||||||| ||||||||||||  || ||||||||||||| |||| |||||| || ||||||||||||||||    
T  37767189 ttttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaatgttagaatgtaagatattgtttgatttgtctc 37767090  T
Q  104 gac 106  Q
    |||    
T  37767089 gac 37767087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 20875472 - 20875379
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||||||||| | | |||||||||||||| |||||||||||| |||||||  |||| || |||| ||| |||||||||||||||||||    
T  20875472 aatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataagatgttgtttgatttgtctc 20875379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 50181116 - 50181190
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  50181116 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 50181190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 54610890 - 54610980
Alignment:
Q  1 aatttttgcaatgtgcact-attcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttg 90  Q
    |||||||||||||| |||| ||||| |||||||||||| | |||| ||||||| ||||||||||||||| ||||||| |||||| ||||||    
T  54610890 aatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaatacagatattagtatgtaagatgttg 54610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 56297935 - 56297834
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||| |||||| || ||||||  | ||||  |||||||||| || ||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||    
T  56297935 atttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgttgtctgatttgtc 56297836  T
Q  102 tc 103  Q
    ||    
T  56297835 tc 56297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 38721366 - 38721469
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||| ||||||| | ||||||  ||||||| ||||| |||| |||||||| ||| ||||||||||||| ||||||||||| ||||||||  ||||||     
T  38721366 attttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgttagcatgtaagatgttgttcaatttgtt 38721465  T
Q  102 tcga 105  Q
    ||||    
T  38721466 tcga 38721469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 19903854 - 19903780
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||  ||||||||||| ||||||||||||| ||||||||| | || ||||||||||||| ||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgtttgatttgtttcga 19903780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 25101749 - 25101831
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaa 84  Q
    |||||||||||||| | |||| || ||| ||| ||||||||||||||||||||||  ||||||| ||||||||||||| ||||    
T  25101749 atttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaaatattagcatataaa 25101831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 55091391 - 55091317
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| | |||| ||||||| |||| ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  55091391 ttactttcatcatattttttaattaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtctcga 55091317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 2571107 - 2571014
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||| ||||||  ||| ||| |||||| ||| |||||||||||| ||||||||||||| ||||||||||| || |  |||||||||||||    
T  2571107 aatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 2571014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 5428607 - 5428708
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    ||||| |||||||||||||||||  |||||||| |||||||||||||||||||||   ||||||| ||||  || ||||||| ||||||||  ||||||     
T  5428607 attttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaa--cataaatataaatgctatcatgtaagatgttgttccatttgtt 5428704  T
Q  102 tcga 105  Q
    ||||    
T  5428705 tcga 5428708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 34316550 - 34316636
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||| || ||||||||||| || ||||||||||||| |||| || ||||||||| ||||||||||||| ||||||| ||| |||||    
T  34316550 atttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgttagcatataagatgtt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 32871590 - 32871489
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| ||| ||| ||||||| |||||||  ||||| |||| |||||||||||| | ||||||||||| | || |||||  |||||||||||||||| ||    
T  32871590 ttttgtaatatgctctattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgtttgatttgtttc 32871491  T
Q  104 ga 105  Q
    ||    
T  32871490 ga 32871489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 29051740 - 29051792
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||||||||||| |||||||||||| |||||||||||  ||||||||||||    
T  29051740 acttactttgaccatattttttaactaatatataaatacaa--attagcatgtaa 29051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 29586063 - 29585977
Alignment:
Q  16 cactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||||  | |||||||||||| ||| ||||||| |||| | ||||||||||| ||| ||||||||||||| |||||||| ||||    
T  29586063 cactattcacataacttactttgac-atattttttaattaatatgtaaatacaaatgttaacatgtaaaatgttttttgatttatctc 29585977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23360207 - 23360273
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 71  Q
    ||||||||||| |||||||||||  ||||||||||||||| || |||||||||||| ||| |||||||||    
T  23360207 atttttgcaatatgcactattca--tgacttactttgacc-tattttttaactaatatatgaatacaaat 23360273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 27344137 - 27344083
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| |||||||| |||||||| ||| ||| ||||||||||||||||    
T  27344137 tttttaactaatatataaataaaaatattaacatataagatgttgtttgatttgt 27344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 27755748 - 27755855
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaacta----atgtataaatacaaatattagcatgtaaaatgttgtttgatt 97  Q
    ||||||| ||||| || | ||||| | ||||| |||||||||||||||||||||    || ||||||||||||| |||||| |||| ||||||||  |||    
T  27755748 atttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcacgtaagatgttgttcaatt 27755847  T
Q  98 tgtctcga 105  Q
    ||| ||||    
T  27755848 tgtttcga 27755855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 34323144 - 34323198
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| | ||||||||||  |||||| ||||||||||||||||    
T  34323144 tttttaactaatgtatacacacaaatattaatatgtaagatgttgtttgatttgt 34323198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 38416716 - 38416678
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  38416716 gtcaaaattatgcattggcatatgtgaagtggttgactt 38416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 43967919 - 43967957
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  43967919 gtcaaaattatgcattggcatatgtgaagtggttgactt 43967957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 9029514 - 9029477
Alignment:
Q  170 tcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||| |||||||||||||||||||||||||||||    
T  9029514 tcaaaattgtgcattggcatatgtgaagtgattgactt 9029477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 17610474 - 17610514
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  17610474 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 17610514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 19433426 - 19433386
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  19433426 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 19433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 34652280 - 34652208
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatt 74  Q
    ||||||| |||||| |||||| |   ||||||||| ||||||| |||||||||||  ||||||||||||||||    
T  34652280 atttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 35686601 - 35686641
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  35686601 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 35686641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 50685403 - 50685339
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaat-acaaatattagcatgtaaaatgttgttt 93  Q
    ||||||||||||||| |||||||||||| ||||| | | |||| ||| |||||||||||||||||    
T  50685403 cttactttgaccatattttttaactaatatataattaaaaaatgttatcatgtaaaatgttgttt 50685339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 53304481 - 53304541
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    ||||||||||| |||| |||| ||||||| || ||||| ||||||||||||||||| ||||    
T  53304481 acttactttgatcatatttttaaactaatatacaaatataaatattagcatgtaaattgtt 53304541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 7738871 - 7738950
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  7738871 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 7738950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 46212402 - 46212481
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||| |||||||| |||| |||||||    
T  46212402 ttgacatactttgaccatacttttatactaattcataaagataaataatatcatgtaagatgttgttggattcgtctcga 46212481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 2760796 - 2760758
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  2760796 gtcaaaattatgcattgacatatgtgaagtggttgactt 2760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 10550455 - 10550555
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttt--taactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||| |||| |||||||||||  ||  ||||||| |||||| ||||  |||||||| |||||||| |||| |||||||||||   | |||||||||||||    
T  10550455 ttttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatgtaa---gatgtttgatttgtc 10550551  T
Q  102 tcga 105  Q
    ||||    
T  10550552 tcga 10550555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 34652192 - 34652158
Alignment:
Q  59 tataaatacaaatattagcatgtaaaatgttgttt 93  Q
    ||||||||||||||||||||||||| |||||||||    
T  34652192 tataaatacaaatattagcatgtaagatgttgttt 34652158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 44232143 - 44232105
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  44232143 gtcaaaattatgcattgtcatatgtgaagtggttgactt 44232105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 45292028 - 45292066
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  45292028 gtcaaaattatgcattggcatatgtgaagtagttgactt 45292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 55209640 - 55209602
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  55209640 gtcaaaattatgcattggcatatgtaaagtggttgactt 55209602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 5735474 - 5735401
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||| |||||||| |||| |||||||    
T  5735474 tactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctcga 5735401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 26125905 - 26125942
Alignment:
Q  170 tcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  26125905 tcaaaattgtgcattgccatatgtgaagtgattgactt 26125942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 38721534 - 38721571
Alignment:
Q  170 tcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  38721534 tcaaaattgtgcattggcatatgtgaagtggttgactt 38721571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 47579489 - 47579416
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||| ||||||  | ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  47579489 tactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctcga 47579416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 49768648 - 49768575
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||| ||||||  | ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  49768648 tactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctcga 49768575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaa 83  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 43968243 - 43968295
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| ||||||| ||||||||| ||| || |||||| ||||||||    
T  43968243 tttttaactaatatataaatgcaaatattatcatatacaatgttatttgattt 43968295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 54330758 - 54330718
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||| |||||| ||||||| |||||||||||||||||||||    
T  54330758 cggttaaaattgtgcattgacatatgtgaagtgattgactt 54330718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 94; Significance: 4e-46; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 68003 - 67898
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  68003 aatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgt 67904  T
Q  101 ctcgac 106  Q
    ||||||    
T  67903 ctcgac 67898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 67838 - 67798
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  67838 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 67798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 4e-46; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28061749 - 28061644
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  28061749 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 28061650  T
Q  101 ctcgac 106  Q
    ||||||    
T  28061649 ctcgac 28061644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36623336 - 36623441
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  36623336 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 36623435  T
Q  101 ctcgac 106  Q
    ||||||    
T  36623436 ctcgac 36623441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40256085 - 40256190
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40256085 aatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 40256184  T
Q  101 ctcgac 106  Q
    ||||||    
T  40256185 ctcgac 40256190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42890577 - 42890472
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42890577 aatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 42890478  T
Q  101 ctcgac 106  Q
    ||||||    
T  42890477 ctcgac 42890472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44732040 - 44732145
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44732040 aatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 44732139  T
Q  101 ctcgac 106  Q
    ||||||    
T  44732140 ctcgac 44732145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47156055 - 47156160
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  47156055 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 47156154  T
Q  101 ctcgac 106  Q
    ||||||    
T  47156155 ctcgac 47156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48602464 - 48602569
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  48602464 aatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 48602563  T
Q  101 ctcgac 106  Q
    ||||||    
T  48602564 ctcgac 48602569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39130160 - 39130055
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39130160 aatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 39130061  T
Q  101 ctcgac 106  Q
    ||||||    
T  39130060 ctcgac 39130055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32431592 - 32431488
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  32431592 aatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtatgtaagatgttgtttgatttgt 32431493  T
Q  101 ctcga 105  Q
    |||||    
T  32431492 ctcga 32431488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 16778536 - 16778638
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16778536 ttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 16778635  T
Q  104 gac 106  Q
    |||    
T  16778636 gac 16778638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7438931 - 7439036
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7438931 aatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 7439030  T
Q  101 ctcgac 106  Q
    ||||||    
T  7439031 ctcgac 7439036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20885131 - 20885236
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20885131 aatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 20885230  T
Q  101 ctcgac 106  Q
    ||||||    
T  20885231 ctcgac 20885236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36585137 - 36585242
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36585137 aatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 36585236  T
Q  101 ctcgac 106  Q
    ||||||    
T  36585237 ctcgac 36585242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38852081 - 38851976
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  38852081 aatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatattgtttgatttgt 38851982  T
Q  101 ctcgac 106  Q
    ||||||    
T  38851981 ctcgac 38851976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40090152 - 40090047
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  40090152 aattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttat 40090053  T
Q  101 ctcgac 106  Q
    ||||||    
T  40090052 ctcgac 40090047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41898016 - 41898121
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  41898016 aatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttcatttgt 41898115  T
Q  101 ctcgac 106  Q
    ||||||    
T  41898116 ctcgac 41898121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35117154 - 35117258
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35117154 aatttttgcaatatgcactattcacttgacttactttgaccatactttt-aactaatgtataaatataaatattagcatgtaagatgttgtttgatttgt 35117252  T
Q  101 ctcgac 106  Q
    ||||||    
T  35117253 ctcgac 35117258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 46479857 - 46479962
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46479857 aatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 46479956  T
Q  101 ctcgac 106  Q
    ||||||    
T  46479957 ctcgac 46479962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 30342102 - 30342206
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  30342102 aatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtatgtaagatgtcgtttgatttgt 30342201  T
Q  101 ctcga 105  Q
    |||||    
T  30342202 ctcga 30342206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 42877417 - 42877516
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  42877417 ttttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaatattagaatgtaagatgttgtttgatttgtctc 42877516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25566781 - 25566680
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  25566781 aatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagcatgtgagatgttgtttgatttgt 25566683  T
Q  101 ctc 103  Q
    |||    
T  25566682 ctc 25566680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 7457952 - 7457864
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 93  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7457952 ttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 7457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41134717 - 41134617
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41134717 aatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 41134623  T
Q  101 ctcgac 106  Q
    ||||||    
T  41134622 ctcgac 41134617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 2198634 - 2198735
Alignment:
Q  5 tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcg 104  Q
    ||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  2198634 tttgcaatgtgtactattcatctgatttattttgaacatactttttaactaatgtataaatacaaatattaacaagtaagatgttgtttgatttgtctcg 2198733  T
Q  105 ac 106  Q
    ||    
T  2198734 ac 2198735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5788611 - 5788506
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||  ||| |||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  5788611 aatttttgtgatgagcactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgtaagatgttgtttgatttgt 5788512  T
Q  101 ctcgac 106  Q
    ||||||    
T  5788511 ctcgac 5788506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11502814 - 11502713
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| |||||||| |||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  11502814 aatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgtcgtttgatttgt 11502715  T
Q  101 ct 102  Q
    ||    
T  11502714 ct 11502713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6174864 - 6174952
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  6174864 aatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcatgtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8683846 - 8683945
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||   || ||||||||||||||||    
T  8683846 aatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca---aagatgttgtttgatttgt 8683942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 46103579 - 46103499
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  46103579 ttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtttcgac 46103499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3851105 - 3851207
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||   |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| || |||||||||||||    
T  3851105 aatttttgcaatgtgca---ttcacttgacttactttgacaatactttttaactaatgtataaatacaaatattaacacgtaagatattgtttgatttgt 3851201  T
Q  101 ctcgac 106  Q
    | ||||    
T  3851202 cccgac 3851207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 41088618 - 41088720
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||  |||||||||||    
T  41088618 ttttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaatattaacatgtaagatgttgcatgatttgtctc 41088717  T
Q  104 gac 106  Q
    |||    
T  41088718 gac 41088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46322199 - 46322127
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatat 73  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  46322199 aatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaatat 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 6766781 - 6766680
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||| ||||||  | ||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  6766781 ttttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaatgttagcatgtaagatgttgtttgatttgtctc 6766682  T
Q  104 ga 105  Q
    ||    
T  6766681 ga 6766680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 21379817 - 21379877
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcgac 21379877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 4131734 - 4131635
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| ||||||  ||||||||  | ||||||||| |||||| |||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||    
T  4131734 ttttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcatgtaagatgttgtttgatttgtctc 4131635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 26161633 - 26161712
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||| ||||||||||  ||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  26161633 aatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagcatgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 36341649 - 36341747
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||  ||||||| ||| || |||||||||||||||  |||||||| |||| |||| |||||| |||||||| |||||||    
T  36341649 atttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgttagaatgtaagatgttgttcgatttgt 36341747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 16870711 - 16870610
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||||||||||  | |||||||||||||||| || ||||||||| |||||||| |||| || ||| |||||||||| |||||||||||||    
T  16870711 ttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataaatgtttgcacgtaaaatgttatttgatttgtctc 16870612  T
Q  104 ga 105  Q
    ||    
T  16870611 ga 16870610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 27045612 - 27045538
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||| ||| ||||||||| ||||| |||||    
T  27045612 ttactttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtttaatttgcctcga 27045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 49102044 - 49101943
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||||||||||| | ||||| |||   |||| ||||||||||||  |||||||||||| || |||||||| |||||||||||||||||||    
T  49102044 ttttacaatatgcactattcatataacttatttttgtcatattttttaactaatacataaatacaaatttttgcatgtaagatgttgtttgatttgtctc 49101945  T
Q  104 ga 105  Q
    ||    
T  49101944 ga 49101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 23707612 - 23707552
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||||||||||||||||||||||||||||||||| | || || ||||||||||||||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagatattatttgatttgtctcgac 23707552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 49110695 - 49110607
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||| ||||||||  ||| |||||||||||||| |||||||||||| ||| ||||||||| |||  ||||||||| |||||||||||    
T  49110695 aatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgttatgatgtaaaatattgtttgattt 49110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 3785556 - 3785649
Alignment:
Q  9 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||| |||||||||||| |   |||||||||||||| |||||||||||| ||||||||||||| |||| ||  |  ||||||||||||||||||    
T  3785556 caatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatgttagtatacaggatgttgtttgatttgtct 3785649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 35570285 - 35570179
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccata-----ctttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||| ||||||||||||||||    ||||||||||||||||      |||||||||||| || |||||||||| ||||||||||| |||||||  |||||    
T  35570285 ttttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaatacaaattttagcatgtaagatgttgtacgattt 35570186  T
Q  99 gtctcga 105  Q
    |||||||    
T  35570185 gtctcga 35570179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 41898184 - 41898222
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41898184 gtcaaaattatgcattggcatatgtgaagtgattgactt 41898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 7169157 - 7169242
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    ||||||||||||   ||||||  ||| |||||||||| ||| |||||||||||| ||||||||||||||||| ||| ||| |||||    
T  7169157 ttttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaatattaacatataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 42662243 - 42662284
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaat 71  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  42662243 cttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 5529073 - 5529141
Alignment:
Q  35 tttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||| ||| |||||||||||| || ||||| |||| ||||||||||| ||||| |||||||||||||    
T  5529073 tttgactatattttttaactaatatacaaataaaaatgttagcatgtaagatgttatttgatttgtctc 5529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 37467511 - 37467444
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttg 99  Q
    ||||||| |||||| |||||||||||| ||||||||||||| ||||||| ||| || ||||||||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcatttaagat-ttgtttgatttg 37467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 38767265 - 38767202
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 92  Q
    |||||||||||||||| |||||||||||| ||||||||||||| | || || ||| ||||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgtt 38767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 45331941 - 45331992
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaac 53  Q
    ||||||||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  45331941 atttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 28061581 - 28061543
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  28061581 gtcaaaattatgcattggcatatgtgaagtggttgactt 28061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 34750556 - 34750618
Alignment:
Q  27 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    ||||||||||||||| ||||||||||||||| || ||||| |||| ||| ||||||| |||||    
T  34750556 tgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagatgtt 34750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 36623504 - 36623542
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  36623504 gtcaaaattatgcattggcatatgtgaagtggttgactt 36623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 46103436 - 46103398
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  46103436 gtcaaaattatgcattggcatatgtgaagtggttgactt 46103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 47156223 - 47156261
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  47156223 gtcaaaattatgcattggcatatgtgaagtggttgactt 47156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 48602632 - 48602670
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  48602632 gtcaaaattatgcattggcatatgtgaagtggttgactt 48602670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 47526042 - 47525969
Alignment:
Q  30 cttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||||||| |||| ||||| ||||||| ||||||||||||| ||||||| ||| || ||||| |||||||||    
T  47526042 cttactttgatcatatttttttaactaatatataaatacaaatgttagcatttaagatcttgttcgatttgtct 47525969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 3851268 - 3851308
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  3851268 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 3851308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 11502648 - 11502608
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  11502648 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 11502608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 16778699 - 16778739
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  16778699 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 16778739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 31466410 - 31466489
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  31466410 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 31466489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 23707489 - 23707451
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  23707489 gtcaaaattatgcattgacatatgtgaagtggttgactt 23707451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 36515895 - 36515969
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||| |||||| |||||||  ||| ||||||||||||| |||| || ||| ||||||||  |||||||||    
T  36515895 acttactttaaccatattttttaatcaatatataaatacaaatgttagtatataagatgttgttcaatttgtctc 36515969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 38851913 - 38851875
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  38851913 gtcaaaattatgcattggcatatgtaaagtggttgactt 38851875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 42890410 - 42890372
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  42890410 gtcaaaattatgcattggcatatgtaaagtggttgactt 42890372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 19120719 - 19120662
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||| |||| |||||||| |||||||||||||||| || ||| |||| |||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagatattggttgacttgtctc 19120662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 46321322 - 46321285
Alignment:
Q  65 tacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  46321322 tacaaatattagcatgtaagatgttatttgatttgtct 46321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 4048923 - 4048871
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| |||||||||||||  |||| |||||  |||||||||||||    
T  4048923 tttttaactaatatataaatacaaatgctagcttgtaagttgttgtttgattt 4048871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 7439099 - 7439135
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgac 205  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  7439099 gtcaaaattgtgcattggtatatgtgaagtgattgac 7439135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 20885297 - 20885337
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  20885297 cggtcaaaattgtgcattggcatgtgtgaagtggttgactt 20885337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 32431426 - 32431386
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||| ||||| |||||||    
T  32431426 cggtcaaaattgtgcattggcatatgtaaagtggttgactt 32431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 36585856 - 36585896
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||  ||||||||||||||||| |||||||    
T  36585856 cggtcaaaattatgtgttggcatatgtgaagtgcttgactt 36585896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 42834327 - 42834423
Alignment:
Q  9 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||| |||| |||| ||||||  ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  42834327 caatatgcattattgatttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctcga 42834423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 42877580 - 42877620
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||| | ||||||||||||||||||||| |||||||    
T  42877580 cggtcaaaactgtgcattggcatatgtgaagtggttgactt 42877620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 46480016 - 46480052
Alignment:
Q  70 atattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  46480016 atattaacatgtaagatgttgtttgatttgtctcgac 46480052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 4e-46; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13499569 - 13499464
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  13499569 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 13499470  T
Q  101 ctcgac 106  Q
    ||||||    
T  13499469 ctcgac 13499464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39866375 - 39866270
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  39866375 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 39866276  T
Q  101 ctcgac 106  Q
    ||||||    
T  39866275 ctcgac 39866270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42490430 - 42490325
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42490430 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 42490331  T
Q  101 ctcgac 106  Q
    ||||||    
T  42490330 ctcgac 42490325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27334965 - 27334861
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  27334965 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 27334866  T
Q  101 ctcga 105  Q
    |||||    
T  27334865 ctcga 27334861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21797584 - 21797689
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21797584 aatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 21797683  T
Q  101 ctcgac 106  Q
    ||||||    
T  21797684 ctcgac 21797689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27010708 - 27010603
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  27010708 aatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 27010609  T
Q  101 ctcgac 106  Q
    ||||||    
T  27010608 ctcgac 27010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20765224 - 20765329
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  20765224 aatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgt 20765323  T
Q  101 ctcgac 106  Q
    ||||||    
T  20765324 ctcgac 20765329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33415827 - 33415932
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  33415827 aatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 33415926  T
Q  101 ctcgac 106  Q
    ||||||    
T  33415927 ctcgac 33415932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36227573 - 36227678
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  36227573 aatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 36227672  T
Q  101 ctcgac 106  Q
    ||||||    
T  36227673 ctcgac 36227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42761717 - 42761612
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42761717 aatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 42761618  T
Q  101 ctcgac 106  Q
     |||||    
T  42761617 ttcgac 42761612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33803549 - 33803651
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatac-tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  33803549 aatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgtaagatgttgtttgatttg 33803648  T
Q  100 tct 102  Q
    |||    
T  33803649 tct 33803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21005321 - 21005426
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||||||||    
T  21005321 aatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaatattagcatgtaagatgttgtttgatttgt 21005420  T
Q  101 ctcgac 106  Q
    ||||||    
T  21005421 ctcgac 21005426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43467976 - 43467871
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||| |||| ||||||||||||||||    
T  43467976 aatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaatattagcaggtaagatgttgtttgatttgt 43467877  T
Q  101 ctcgac 106  Q
    ||||||    
T  43467876 ctcgac 43467871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 30213845 - 30213937
Alignment:
Q  14 tgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30213845 tgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctcgac 30213937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34912376 - 34912286
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  34912376 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagattgtaagatgttgt 34912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 6910365 - 6910466
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6910365 ttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtctc 6910464  T
Q  104 ga 105  Q
    ||    
T  6910465 ga 6910466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 38137854 - 38137954
Alignment:
Q  3 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||||||| ||||||||||  |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38137854 tttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtct 38137953  T
Q  103 c 103  Q
    |    
T  38137954 c 38137954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 54507669 - 54507766
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  54507669 aatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatattagcatgtaagatgttgtttgattt 54507766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19823928 - 19824028
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttg-atttg 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||||| |||||    
T  19823928 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtat------aaatattagcatgtaagatgttgtttgaatttg 19824021  T
Q  100 tctcgac 106  Q
    |||||||    
T  19824022 tctcgac 19824028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43181590 - 43181484
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttg 99  Q
    |||||| | ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| |||||    
T  43181590 aattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagtatgtaagatgttgtttaatttg 43181491  T
Q  100 tctcgac 106  Q
    |||||||    
T  43181490 tctcgac 43181484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 44561816 - 44561916
Alignment:
Q  5 tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcg 104  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||| ||  ||||||| |||||||| ||||||| |||    
T  44561816 tttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgtaagatgttgttcgatttgtttcg 44561915  T
Q  105 a 105  Q
    |    
T  44561916 a 44561916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 3430505 - 3430407
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||||||||||||| || | |||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||   |||||||||||||||    
T  3430505 ttttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaa---tgtttgatttgtctc 3430409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 52167240 - 52167339
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| |||||| | ||||||| ||||||  |||||||||||||||||| |||| |||||||||||||||||  |||||| |||||||||||||||||||    
T  52167240 ttttgtaatgtgtattattcatatgacttcttttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgtttgatttgtctc 52167339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 15333037 - 15332936
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| ||||||||||||||||  |  ||| ||||||||| | |||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  15333037 ttttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattggtctc 15332938  T
Q  104 ga 105  Q
    ||    
T  15332937 ga 15332936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45613601 - 45613662
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtata 62  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  45613601 aatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaatgtata 45613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 41252994 - 41252896
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| ||||||||||||||||| |  |||||||| |||||| |||||||||||| ||||||||||||| ||||||| |||   | |||||||||||||||    
T  41252994 ttttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgttagcatataa---gatgtttgatttgtctc 41252898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 48334724 - 48334651
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| |||||  |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  48334724 ttactttaaccattttttttaacta-tatataaatacaaatattagcatgtaagatgttgtttgatttgtctcga 48334651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 41751613 - 41751540
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||| |||| |||||||||||| ||||||||||||| ||||||| ||  |||||||||||| ||||||||    
T  41751613 tactttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgtttgatatgtctcga 41751540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 25527435 - 25527520
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    ||||||||||||||   ||||||  |||||||||| ||||||| ||||||||| || ||||||||||||||||| ||||||| |||||    
T  25527435 atttttgcaatgtga--tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaacatgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 44856400 - 44856478
Alignment:
Q  27 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||| || |||||||||||||||  ||||||||||||| |||| |||||| |||||||| | ||||| ||||    
T  44856400 tgacttactttaactatactttttaactaacatataaatacaaatgttagtatgtaagatgttgttcgttttgtttcga 44856478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 22786667 - 22786757
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||||||||||||  |  |||||||||||  || |||||||||||| ||||||  ||||| || |||||||| ||||||||||||||||||    
T  22786667 aatgtgcactattcacatagcttactttgactctattttttaactaatatataaa--caaatgtttgcatgtaagatgttgtttgatttgtct 22786757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 33128125 - 33128049
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||| |||||||||||||||||  ||||||| |||||||| ||||||| || |||| |||||||| ||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgtctgatttgtttcga 33128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 13499401 - 13499363
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  13499401 gtcaaaattatgcattggcatatgtgaagtggttgactt 13499363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 15568135 - 15568065
Alignment:
Q  35 tttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| |||| |||||||||||| ||||||||||||| ||| | ||||| || |||||| |||||||||||    
T  15568135 tttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagatattgttttatttgtctcga 15568065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 20765392 - 20765430
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  20765392 gtcaaaattatgcattggcatatgtgaagtggttgactt 20765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 27010540 - 27010502
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  27010540 gtcaaaattatgcattggcatatgtgaagtggttgactt 27010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 27334797 - 27334759
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  27334797 gtcaaaattatgcattggcatatgtgaagtggttgactt 27334759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 39866207 - 39866169
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  39866207 gtcaaaattatgcattggcatatgtgaagtggttgactt 39866169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 42490262 - 42490224
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42490262 gtcaaaattatgcattggcatatgtgaagtggttgactt 42490224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 42761549 - 42761511
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42761549 gtcaaaattatgcattggcatatgtgaagtggttgactt 42761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 22782303 - 22782393
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||||||||||||||  |  |||||||||||  || |||||||||||  ||||||  ||||| || |||||||| ||||||||||||||||||    
T  22782303 aatgtgcactattcacatagcttactttgactctattttttaactaaaatataaa--caaatgtttgcatgtaagatgttgtttgatttgtct 22782393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 6910528 - 6910568
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  6910528 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 6910568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 28690338 - 28690378
Alignment:
Q  66 acaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  28690338 acaaatattaacatgtaagatgttgtttgatttgtctcgac 28690378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 30057358 - 30057430
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcg 104  Q
    |||||| |||||| |||||||||||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||||    
T  30057358 tactttaaccatattttttaactaatatataaaagcaaatgttagcatataagatgatgttcgatttgtctcg 30057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 36227739 - 36227779
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  36227739 cggtcaaaattgtgcattggcatgtgtgaagtgattgactt 36227779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 17643789 - 17643852
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttg 94  Q
    ||||| |||| ||| |||||||||||| | ||||||||||| ||||||||||| || |||||||    
T  17643789 ttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgtttg 17643852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 23224361 - 23224286
Alignment:
Q  31 ttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||| | || |||||| || ||||||    
T  23224361 ttactttgactatacttttttaactaatatataaatgcaaatattagaatgtaagaagtggtttgaattttctcga 23224286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32220891 - 32220930
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgac 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  32220891 aatttttgcaatgtgtactattcacttgacttactttgac 32220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 32220931 - 32220966
Alignment:
Q  71 tattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32220931 tattagcatgtaagatgttgtttgatttgtctcgac 32220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 21005489 - 21005527
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||||||||||||| || |||||||    
T  21005489 gtcaaaattatgcattggcatatgtgaaatggttgactt 21005527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 27813511 - 27813445
Alignment:
Q  12 tgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 78  Q
    |||||||||||||  |  |||| |||||| ||| |||||||||||| ||||||||||||| ||||||    
T  27813511 tgtgcactattcacatagcttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 30213999 - 30214037
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  30213999 gtcaaaattatgcatcggcatatgtgaagtggttgactt 30214037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 38492267 - 38492181
Alignment:
Q  19 tattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||| |||| || ||||||||||||| ||||  |||||| || ||| | ||||| || |||||||||||||||| |||| |||||||    
T  38492267 tattgatttaacatactttgaccatatttttctactaatttacaaagataaataatatcatgtaaaatgttgttggattcgtctcga 38492181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 41943270 - 41943344
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||| ||| || ||| |||||||||||| | ||||||||||| |||  || ||| |||||||||||||||||||    
T  41943270 acttattttaacaatattttttaactaatatttaaatacaaatgttaatatataagatgttgtttgatttgtctc 41943344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 1327515 - 1327442
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  1327515 tactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 1327442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 18659255 - 18659182
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||| |||||||| |||| |||||||    
T  18659255 tactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctcga 18659182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 3017853 - 3017897
Alignment:
Q  35 tttgaccatactttttaactaatgtataaatacaaatattagcat 79  Q
    |||||||||| |||||||||| | ||||||||||||| |||||||    
T  3017853 tttgaccatattttttaactattatataaatacaaatgttagcat 3017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 28690442 - 28690482
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||| ||||||||||||| |||||||    
T  28690442 cggtcaaaattgtgcattgacatatgtgaagtggttgactt 28690482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 38138019 - 38138059
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  38138019 cggtcaaaattgtgcattggcatgtgtgaagtggttgactt 38138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 4e-46; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11641301 - 11641196
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  11641301 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 11641202  T
Q  101 ctcgac 106  Q
    ||||||    
T  11641201 ctcgac 11641196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36757720 - 36757615
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  36757720 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 36757621  T
Q  101 ctcgac 106  Q
    ||||||    
T  36757620 ctcgac 36757615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6402644 - 6402539
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  6402644 aatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 6402545  T
Q  101 ctcgac 106  Q
    ||||||    
T  6402544 ctcgac 6402539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16120674 - 16120573
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16120674 aatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 16120575  T
Q  101 ct 102  Q
    ||    
T  16120574 ct 16120573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30003561 - 30003662
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30003561 aatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 30003660  T
Q  101 ct 102  Q
    ||    
T  30003661 ct 30003662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40772006 - 40771901
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40772006 aatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 40771907  T
Q  101 ctcgac 106  Q
    ||||||    
T  40771906 ctcgac 40771901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42788776 - 42788671
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  42788776 aatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatttgcatgtaagatgttgtttgatttgt 42788677  T
Q  101 ctcgac 106  Q
    ||||||    
T  42788676 ctcgac 42788671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17305982 - 17306087
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  17305982 aatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 17306081  T
Q  101 ctcgac 106  Q
    ||||||    
T  17306082 ctcgac 17306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30701746 - 30701851
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  30701746 aatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgt 30701845  T
Q  101 ctcgac 106  Q
    ||||||    
T  30701846 ctcgac 30701851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36399126 - 36399231
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36399126 aatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgt 36399225  T
Q  101 ctcgac 106  Q
    ||||||    
T  36399226 ctcgac 36399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40977722 - 40977621
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40977722 aatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 40977623  T
Q  101 ct 102  Q
    ||    
T  40977622 ct 40977621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9342879 - 9342774
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||||  |||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9342879 aatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 9342780  T
Q  101 ctcgac 106  Q
    ||||||    
T  9342779 ctcgac 9342774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52024054 - 52024159
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  52024054 aatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaatattagcgtgtaagatgttgtttgatttgt 52024153  T
Q  101 ctcgac 106  Q
    ||||||    
T  52024154 ctcgac 52024159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6766400 - 6766502
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   | ||||||||||||    
T  6766400 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa---gatgtttgatttgt 6766496  T
Q  101 ctcgac 106  Q
    ||||||    
T  6766497 ctcgac 6766502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26910104 - 26910205
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||| ||||||    
T  26910104 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgcaagatgatgtttaatttgt 26910203  T
Q  101 ct 102  Q
    ||    
T  26910204 ct 26910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27292668 - 27292773
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  27292668 aatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaatattagcatgtaagatgttatttgatttgt 27292767  T
Q  101 ctcgac 106  Q
    ||||||    
T  27292768 ctcgac 27292773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24321287 - 24321394
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatac--tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||||||||||||||| |||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  24321287 aatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaatattagcatgtaagatattgtttgattt 24321386  T
Q  99 gtctcgac 106  Q
    ||||||||    
T  24321387 gtctcgac 24321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42735402 - 42735294
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatacttttt---aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatt 97  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  42735402 aattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattagcatgtaagatgatgtttgatt 42735303  T
Q  98 tgtctcgac 106  Q
    |||||||||    
T  42735302 tgtctcgac 42735294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15912570 - 15912466
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| | | || | ||||||||||||||||||||||| ||||||||||||||||    
T  15912570 aatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaagatgttgtttgatttgt 15912471  T
Q  101 ctcga 105  Q
    |||||    
T  15912470 ctcga 15912466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 42367513 - 42367425
Alignment:
Q  18 ctattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  42367513 ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgttatttgatttgtctcgac 42367425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48375030 - 48375127
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||||||||| || |||||| || ||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||| |  |||||||||||    
T  48375030 aatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaagacattgtttgattt 48375127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4302146 - 4302234
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||||||| ||||||| | ||||||||||||||  ||  ||||||||||||||||||||| |||||||||||||||| |||||    
T  4302146 aatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagcatgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 28030914 - 28030811
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||||||||||||| |||| |  ||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||| || |||||  ||||||     
T  28030914 atttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaagatattgttcaatttgtt 28030815  T
Q  102 tcga 105  Q
    ||||    
T  28030814 tcga 28030811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 3485438 - 3485337
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| ||||||||||   | ||||||||||| |||| |||||||||||| ||||||||||||| ||| |||||||  ||||||||||||||||||    
T  3485438 ttttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgtaaggtgttgtttgatttgtctc 3485339  T
Q  104 ga 105  Q
    ||    
T  3485338 ga 3485337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 38153502 - 38153407
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||||||||||||||  ||||||||| | ||||||||||||||||||  ||||||||||||| ||| ||||||| ||||| || ||||||| ||||    
T  38153502 aatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaagatgttcttcgatttgtttcga 38153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 40800618 - 40800517
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    |||| ||||||||| || |||  | |||||||||||||||| ||||| ||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  40800618 ttttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatataa-tacaaatgttagcatgtaagatgttgtttgatttgtct 40800520  T
Q  103 cga 105  Q
    |||    
T  40800519 cga 40800517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 15382657 - 15382556
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||||| |||||||||  | ||||||| ||||||   ||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||    
T  15382657 ttttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagtatgtaagatgttgtttgatttgtttc 15382558  T
Q  104 ga 105  Q
    ||    
T  15382557 ga 15382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 22575792 - 22575724
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    |||||||| | |||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  22575792 cttactttcatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattt 22575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 44647946 - 44647843
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtc 101  Q
    |||||| ||||||| | ||||||  ||||||| ||||| |||| |||||||| ||| ||||||||||||| ||||||||||| ||||||||  ||||||     
T  44647946 attttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgttagcatgtaagatgttgttcaatttgtt 44647847  T
Q  102 tcga 105  Q
    ||||    
T  44647846 tcga 44647843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 16689862 - 16689951
Alignment:
Q  11 atgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||||  | ||||||||||| |||| ||| |||||||| ||||||||||   ||| |||||||| |||||||||||||||||||    
T  16689862 atgtgcactattcacataacttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgtttgatttgtctc 16689951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 25171240 - 25171287
Alignment:
Q  59 tataaatacaaatattagcatgtaaaatgttgtttgatttgtctcgac 106  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgtttgatttgtttcgac 25171287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 30385370 - 30385291
Alignment:
Q  10 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 89  Q
    |||||||||||||||  |   |||||||||||||| |||||||||||| ||||||||||||| |||| |||||| |||||    
T  30385370 aatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatgtt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 31444986 - 31445053
Alignment:
Q  36 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||| |||||||||||| |||||| |||||| || |||||||| ||||||||| |||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgtttaatttgtctc 31445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 50972842 - 50972771
Alignment:
Q  27 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||| ||| ||| |||||| ||||| |||||    
T  50972842 tgacttactttgaacatactttttaaataatatataaatacaaatgttaacatataaaatattgttcgattt 50972771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 44644588 - 44644510
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 80  Q
    |||||| ||||||| | ||||||  ||||||||||||| |||| |||||||| ||| ||||||||||||| ||||||||    
T  44644588 attttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaatgttagcatg 44644510  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 44452120 - 44452164
Alignment:
Q  59 tataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  44452120 tataaatacaaatgttagcatgtaaaatattgtttgatttgtctc 44452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 14777090 - 14777157
Alignment:
Q  31 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgattt 98  Q
    ||||||||| |||| |||||||||  | |||||||||||||||||  |||||| ||||||||||||||    
T  14777090 ttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgtttgattt 14777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 6402476 - 6402438
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  6402476 gtcaaaattatgcattggcatatgtgaagtggttgactt 6402438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 11641133 - 11641095
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  11641133 gtcaaaattatgcattggcatatgtgaagtggttgactt 11641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 36757552 - 36757514
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  36757552 gtcaaaattatgcattggcatatgtgaagtggttgactt 36757514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 323990 - 324047
Alignment:
Q  48 tttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||| || |||||||||||||||||||||||||| ||| ||| ||||||| ||||    
T  323990 tttaacttatatataaatacaaatattagcatgtaaattgtagttcgatttgtttcga 324047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 7568678 - 7568621
Alignment:
Q  43 tactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    ||||||||||||||| |||||||| |||| ||||  ||||| ||||||||||||||||    
T  7568678 tactttttaactaatatataaatataaatgttagtgtgtaagatgttgtttgatttgt 7568621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 9881332 - 9881405
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtct 102  Q
    ||||| ||| |||||| |||||||||||| |||| ||| |||| ||| ||||||| |||||||| |||||||||    
T  9881332 acttattttaaccataatttttaactaatatatacatataaatgttatcatgtaagatgttgttcgatttgtct 9881405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 9342713 - 9342673
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  9342713 cggtcaaaattgtgcattggcatatgtgaagtggttgactt 9342673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 27292834 - 27292874
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  27292834 cggtcaaaattatgcattagcatatgtgaagtggttgactt 27292874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 42367364 - 42367324
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  42367364 cggtcaaaattgtgcattagcatatgtgaagtgattgactt 42367324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 6766565 - 6766603
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  6766565 gtcaaaattatgcattagcatatgtgaagtggttgactt 6766603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 17306150 - 17306188
Alignment:
Q  169 gtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  17306150 gtcaaaattatgcattggcatatgtgaagtagttgactt 17306188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 25695426 - 25695513
Alignment:
Q  2 atttttgcaatgtgcactattcatttgacttactttgaccatactttt---taactaatgtataaatacaaatattagcatgtaaaat 86  Q
    |||||||||||||||| || |||| | |||| | ||||||||| ||||   |||||||| |||||||| |||| ||||||||| ||||    
T  25695426 atttttgcaatgtgcattaatcatatcacttgcgttgaccatatttttttttaactaatatataaatataaatgttagcatgttaaat 25695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 52379192 - 52379119
Alignment:
Q  32 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||| |||||||| |||| |||||||    
T  52379192 tactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctcga 52379119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 15912406 - 15912366
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  15912406 cggttaaaattgtgcattggcatatgtgaagtggttgactt 15912366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 30003728 - 30003768
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  30003728 cggtcaaaattgtacattgacatatgtgaagtgattgactt 30003768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 100878 - 100776
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  100878 ttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 100779  T
Q  104 gac 106  Q
    |||    
T  100778 gac 100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 100715 - 100675
Alignment:
Q  167 cggtcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    ||||||||||| ||||||||||||||||||||  |||||||    
T  100715 cggtcaaaattgtgcattggcatatgtgaagttgttgactt 100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 82; Significance: 6e-39; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 13947 - 13846
Alignment:
Q  5 tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcg 104  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  13947 tttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgtttaatttgtctcg 13848  T
Q  105 ac 106  Q
    ||    
T  13847 ac 13846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9400 - 9433
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  9400 aatttttgcaatgtgcactattcacttgacttac 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 162071 - 161966
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  162071 aatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttaatttgt 161972  T
Q  101 ctcgac 106  Q
     |||||    
T  161971 ttcgac 161966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 70989 - 71090
Alignment:
Q  1 aatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgt 100  Q
    |||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  70989 aatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaatattagcatttaagatgttgtttgatttgt 71087  T
Q  101 ctc 103  Q
    |||    
T  71088 ctc 71090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 71157 - 71194
Alignment:
Q  170 tcaaaattatgcattggcatatgtgaagtgattgactt 207  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  71157 tcaaaattgtgcattggcatatgtgaagtggttgactt 71194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 9064 - 8965
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||| ||||||  | |||||||||||||| | |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  9064 ttttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 8965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 138261 - 138162
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||| ||||||  | |||||||||||||| | |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  138261 ttttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 138162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 28857 - 28784
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatg-ttgtttgatttgtct 102  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||    
T  28857 cttactttgaccatattttttaactaatttataaatacaaatattagcatataagatgtttgtttgatttgtct 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 22811 - 22910
Alignment:
Q  4 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||| |||| |||| ||||||  | ||||| |||||||| | ||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||    
T  22811 ttttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 22910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 1576 - 1650
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  1576 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 4005 - 4081
Alignment:
Q  30 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa-aatgttgtttgatttgtctcga 105  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||| | | || |||||||||||||||    
T  4005 cttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaagattattttttgatttgtctcga 4081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 53626 - 53550
Alignment:
Q  29 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    |||| |||||| |||| |||||||||||| ||||| ||||||| |||||||| || |||||||||||||||| ||||    
T  53626 acttgctttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgtttgatttgtttcga 53550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 217064 - 217007
Alignment:
Q  46 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    ||||||| |||| ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  217064 tttttaagtaatatataaatacaaatgttagcatataagatgttgtttgatttgtctc 217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 14268 - 14189
Alignment:
Q  26 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtttgatttgtctcga 105  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||| |||||||| |||| |||||||    
T  14268 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctcga 14189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 315673 - 315634
Alignment:
Q  64 atacaaatattagcatgtaaaatgttgtttgatttgtctc 103  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  315673 atacaaatgttagcatgtaagatgttgtttgatttgtctc 315634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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