View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2737_low_2 (Length: 339)
Name: NF2737_low_2
Description: NF2737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2737_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 45102115 - 45102424
Alignment:
| Q |
20 |
tacttggatgtaaaatctcaaataattgcctcattttaaatgtgataattgcctcattattattcctcaagtttatggtctcaatgcattttaaatgcct |
119 |
Q |
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| T |
45102115 |
tacttggatgtaaaatctcaaataattgcctcattttaaatgtgataattgccttattattattcctcaagtttatggtctcaatgcattttaaatgcct |
45102214 |
T |
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| Q |
120 |
catttttactaaatagtataaatctcaaataatttgtattataa------aaacacgtatagaaaagtatgtgaaatatcatatcaacttttatacattt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45102215 |
catttttactaaatagtataaatctcaaataatttgtattataagtaccaaaacacgtatagaaaagtatgtgaaatatcatatcaacttttatacattt |
45102314 |
T |
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| Q |
214 |
tttcactctattaccagttctggaaatgaagcattgtgtaaacgtgacaatgttgaatgtcctttccaaattgaaaagcttcgttcacatgtttttggtc |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45102315 |
tttcactctattaccagttctggaaatgaagcattgtgtaaacgtgaccatgttgaatgtcctttccaaattgaaaagcttcgttcacatgtttttggtc |
45102414 |
T |
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| Q |
314 |
aggagacttt |
323 |
Q |
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|||||||||| |
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| T |
45102415 |
aggagacttt |
45102424 |
T |
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